Citrus Sinensis ID: 011092
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.979 | 0.993 | 0.758 | 0.0 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.902 | 0.871 | 0.652 | 1e-180 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.868 | 0.922 | 0.468 | 1e-117 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.552 | 0.665 | 0.328 | 2e-37 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.560 | 0.672 | 0.334 | 3e-37 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.568 | 0.722 | 0.316 | 1e-36 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.597 | 0.746 | 0.318 | 2e-36 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.560 | 0.669 | 0.345 | 4e-36 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.605 | 0.701 | 0.313 | 4e-36 | |
| Q9CAH1 | 450 | Putative receptor-like pr | no | no | 0.623 | 0.684 | 0.3 | 2e-35 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
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Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/489 (75%), Positives = 424/489 (86%), Gaps = 5/489 (1%)
Query: 1 MGIQCSKFTA-CCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGF 59
MG + SK +A CC + ++ PDV + + E + LP FREF++E ++NATSGF
Sbjct: 1 MGCEVSKLSALCCVSESGRSN----PDVTGLDEEGRGESNDLPQFREFSIETIRNATSGF 56
Query: 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLT 119
A ENIVSEHGE+APNVVYKGKLENQRRIAVKRFNR +WPD RQFLEEA++VGQLRN+R+
Sbjct: 57 AAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMA 116
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
NLLGCC E +ERLL+AE+MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCTSKGR
Sbjct: 117 NLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGR 176
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 239
ALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY
Sbjct: 177 ALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 236
Query: 240 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
SFGTLLLDLLSGKHIPPSHALDLIRDRN+QML DS LEGQF+ DDGTEL+RLASRCLQYE
Sbjct: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYE 296
Query: 300 PRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILE 359
PRERPNPKSLV+A+ PLQK+ E+ SH L+G+P+SA+ + LSPLGEAC R DLTAIHEI+E
Sbjct: 297 PRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIE 356
Query: 360 KISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS 419
K+ YKDDEG ELSFQMWTDQMQ+TL KKKGD AFR KD AIECY+QFI+ GTM S
Sbjct: 357 KLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGS 416
Query: 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
PTV+AR+SLCYLM+DMP++ALN+AMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+
Sbjct: 417 PTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKD 476
Query: 480 GTTLEAKKN 488
G LE+K+N
Sbjct: 477 GAMLESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
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Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/452 (65%), Positives = 365/452 (80%), Gaps = 6/452 (1%)
Query: 41 LPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP 100
+PSF EF+ LK AT+ F+ +NIVSE GEKAPN+VYKG+L+N+R IAVK+F +MAWP+P
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
+QF EEA VG+LR+NRL NL+G CC+GDERLLVAE+MPN+TLAKHLFHWE ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220
LRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKSYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280
+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS LEG+F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-----SAS 335
+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI S
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 336 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 395
PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K+GD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQS 413
Query: 396 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 455
FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ + P W
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 456 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487
A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
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Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 299/450 (66%), Gaps = 21/450 (4%)
Query: 42 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPR 101
P +F+ LK AT+ F+ ENIVS+ + +VV+KG+L+N +A+KRFN MAW DP+
Sbjct: 33 PPLTKFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGGFVAIKRFNNMAWSDPK 89
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
FLEEA+ VG+LR+ RL NL+G CC+GD+R LVA++M N+TLAK LF + M W++RL
Sbjct: 90 LFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRL 149
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 221
RV +A+AL+YC + G A Y++L+AY++LFDEDG+ LS FGLMK + +
Sbjct: 150 RVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------- 201
Query: 222 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281
+ TG V PE+VIY FGT+L++LLSGK IPPSHA ++I +N+ L D L+G+F+
Sbjct: 202 -----ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFS 256
Query: 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH----SASVS 337
D+ + +LAS+CL+YE +E PN K +V L LQ TE PS+ ++ + + ++S S
Sbjct: 257 IDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSS 316
Query: 338 PLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFR 397
LSPLGEAC R DL +IH IL Y DD+ + ELSF+ W +++E + ++ GD AF
Sbjct: 317 NLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAFV 375
Query: 398 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 457
++D K AI CY+QF++ ++V P+VYARRSL YL D P+ AL D M AQ + P W A
Sbjct: 376 EQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAF 435
Query: 458 YLQAAALSAMGMENEAQVALKEGTTLEAKK 487
YLQ+ AL+ + M ++ LKE LE KK
Sbjct: 436 YLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
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Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 34/307 (11%)
Query: 42 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKR 91
P+ + F+ +LK+AT F ++++ GE V+KG ++ + IAVK+
Sbjct: 51 PNLKSFSFAELKSATRNFRPDSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKK 107
Query: 92 FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 151
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 108 LNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 167
Query: 152 TH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208
+ P+ W +RL+V L A+ L + +S+ R +Y D IL D + N +LS FGL K+
Sbjct: 168 LYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKD 227
Query: 209 SRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSH 258
G KS+ ST + + PEYL TG +T +S +YSFG +LL+LLSG+ PS
Sbjct: 228 GPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSG 287
Query: 259 ALD--------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
+ L+ R + + D+ L+ Q++ ++ ++ L+ RCL E + RPN +V
Sbjct: 288 ERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347
Query: 311 TALSPLQ 317
+ L +Q
Sbjct: 348 SHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 166/311 (53%), Gaps = 34/311 (10%)
Query: 42 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKR 91
P+ + FT +LK AT F ++++ E G + V+KG ++ Q IAVK+
Sbjct: 52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108
Query: 92 FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 151
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168
Query: 152 TH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208
++ P+ W +RL+V L A+ L + ++ +Y D IL D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228
Query: 209 SRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPS 257
G KS+ ST + + PEYL TG +T +S +YS+G +LL++LSG K+ PP
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288
Query: 258 H------ALDLIRD-RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
A L+ + R L + D+ L+ Q++ ++ ++ LA RCL +E + RPN +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348
Query: 311 TALSPLQKETE 321
+ L +Q E
Sbjct: 349 SHLEHIQTLNE 359
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 159/316 (50%), Gaps = 35/316 (11%)
Query: 43 SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKRF 92
+ + F+ +LK AT F +++V GE V++G L+ IAVKR
Sbjct: 45 TVKSFSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRL 101
Query: 93 NRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF---H 149
N + R++L E +GQL + L L+G C E ++RLLV E+M +L HLF +
Sbjct: 102 NPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGN 161
Query: 150 WETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKN 208
+ P+ W +R++V L A+ L + S + +Y D+ A IL D D N +LS FGL ++
Sbjct: 162 KDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARD 221
Query: 209 SRDG-KSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH 258
G +SY + + PEY+ TG + S +YSFG +LL+LL G+ H P+
Sbjct: 222 GPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAK 281
Query: 259 ALDLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
+L+ R + ++ D+ L Q+ + L +A +CL +EP+ RP +V
Sbjct: 282 EQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVV 341
Query: 311 TALSPLQKETEVPSHV 326
AL LQ P++V
Sbjct: 342 RALVQLQDSVVKPANV 357
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 35/330 (10%)
Query: 27 VDAAENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR 86
V AA+ E + P + FT +LK AT F ++++ GE V+KG L+
Sbjct: 36 VAAAQKTEGEILSSTP-VKSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLDESTL 91
Query: 87 ----------IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136
IAVK+ N+ + R++L E +GQL + L L+G C E + RLLV E
Sbjct: 92 TPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYE 151
Query: 137 YMPNETLAKHLFHWETH--PMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD 193
+M +L HLF + P+ W +R+ V L A+ L + S + +Y D+ A IL D
Sbjct: 152 FMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLD 211
Query: 194 EDGNPRLSTFGLMKNSRDGK-SYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
D N +LS FGL ++ G SY + + PEY+ +G + S +YSFG LLL+
Sbjct: 212 ADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLE 271
Query: 248 LLSGK----HIPPSHALDLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295
+LSGK H P+ +L+ R + ++ D+ L+ Q+ ++ + +A +C
Sbjct: 272 ILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQC 331
Query: 296 LQYEPRERPNPKSLVTALSPLQKETEVPSH 325
L +EP+ RP +V AL LQ PS
Sbjct: 332 LSFEPKSRPTMDQVVRALQQLQDNLGKPSQ 361
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Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 152/313 (48%), Gaps = 36/313 (11%)
Query: 32 NDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRI-AVK 90
NDE EV + + F+ +L AT F E ++ GE VYKGKLE I AVK
Sbjct: 52 NDEDKEVTNNIAAQTFSFRELATATKNFRQECLI---GEGGFGRVYKGKLEKTGMIVAVK 108
Query: 91 RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW 150
+ +R ++F+ E + L + L NL+G C +GD+RLLV EYM +L HL
Sbjct: 109 QLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDHLLDL 168
Query: 151 --ETHPMKWAMRLRVVLHLAQALEYCTSKGR--ALYHDLNAYRILFDEDGNPRLSTFGLM 206
+ P+ W R+R+ L A LEY K +Y DL A IL D + N +LS FGL
Sbjct: 169 TPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSDFGLA 228
Query: 207 KNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 260
K G + + PEY RTG++T +S +YSFG +LL+L++G+ + +
Sbjct: 229 KLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV-----I 283
Query: 261 DLIRDRNLQMLT-----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
D R ++ Q L D LEG F + + V +A+ CLQ E R
Sbjct: 284 DTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEEATVR 343
Query: 304 PNPKSLVTALSPL 316
P +VTAL L
Sbjct: 344 PLMSDVVTALGFL 356
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 45/344 (13%)
Query: 36 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR--------- 86
E+ P+ + FT +LKNAT F +N++ GE V+KG ++
Sbjct: 63 GEILSSPNLKAFTFNELKNATKNFRQDNLL---GEGGFGCVFKGWIDQTSLTASRPGSGI 119
Query: 87 -IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+AVK+ + +++L E +GQL + L L+G C EG+ RLLV E+MP +L
Sbjct: 120 VVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLEN 179
Query: 146 HLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
HLF P+ WA+R++V + A+ L + +K + +Y D A IL D D N +LS FG
Sbjct: 180 HLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFG 239
Query: 205 LMKN--SRDGKSYSTNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 258
L K + D ST + + PEY+ TGR+T +S +YSFG +LL+L+SG+
Sbjct: 240 LAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR-----R 294
Query: 259 ALD-----------------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
A+D L R L + D+ L GQ+ LA +CL + +
Sbjct: 295 AMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAK 354
Query: 302 ERPNPKSLVTALSPLQKETEVPS-HVLMGIP--HSASVSPLSPL 342
RP ++ L L+ + + H M P H +SV SP+
Sbjct: 355 LRPKMSEVLVTLEQLESVAKPGTKHTQMESPRFHHSSVMQKSPV 398
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9CAH1|Y1725_ARATH Putative receptor-like protein kinase At1g72540 OS=Arabidopsis thaliana GN=At1g72540 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 167/340 (49%), Gaps = 32/340 (9%)
Query: 47 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR-------IAVKRFNRMAWPD 99
FT E+LK T GF+ N + GE VYKG +++ + +AVK R
Sbjct: 72 FTYEELKTITQGFSKYNFL---GEGGFGEVYKGFVDDSLKTGLKDQPVAVKALKREGGQG 128
Query: 100 PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAM 159
R++L E +GQL++ L NL+G CCE DERLLV EYM L HLF + W
Sbjct: 129 HREWLAEVIILGQLKHPHLVNLVGYCCEDDERLLVYEYMERGNLEDHLFQKYGGALPWLT 188
Query: 160 RLRVVLHLAQALEYCTSKGR-ALYHDLNAYRILFDEDGNPRLSTFGLM------KNSRDG 212
R++++L A+ LE+ + + +Y D IL D + +LS FGL ++S
Sbjct: 189 RVKILLGAAKGLEFLHKQEKPVIYRDFKPSNILLSSDFSSKLSDFGLATDGSEEEDSNFT 248
Query: 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-----------ALD 261
KS + PEY+ G +T S ++SFG +LL++L+ + + A
Sbjct: 249 KSVMGTEGYAAPEYISAGNLTTMSDVFSFGVVLLEMLTARKAVEKYRAQRGRNLVEWARP 308
Query: 262 LIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
+++D N L+ + D LEG+++ + + LA +CL + P+ RP ++V L P+
Sbjct: 309 MLKDPNKLERIIDPSLEGKYSVEGIRKAAALAYQCLSHNPKSRPTMTTVVKTLEPILDLK 368
Query: 321 EVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
++ + + I V+ +S + E + D+ + E EK
Sbjct: 369 DIQNGPFVYI---VPVAGVSEVHEIKCKDDVKVVKEETEK 405
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | ||||||
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 0.993 | 1.0 | 0.880 | 0.0 | |
| 356520418 | 491 | PREDICTED: probable serine/threonine-pro | 0.993 | 1.0 | 0.854 | 0.0 | |
| 356504529 | 491 | PREDICTED: probable serine/threonine-pro | 0.985 | 0.991 | 0.855 | 0.0 | |
| 255541562 | 493 | receptor protein kinase, putative [Ricin | 0.995 | 0.997 | 0.850 | 0.0 | |
| 224127648 | 491 | predicted protein [Populus trichocarpa] | 0.993 | 1.0 | 0.846 | 0.0 | |
| 224064025 | 491 | predicted protein [Populus trichocarpa] | 0.993 | 1.0 | 0.838 | 0.0 | |
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 0.987 | 1.0 | 0.835 | 0.0 | |
| 357507281 | 492 | hypothetical protein MTR_7g077150 [Medic | 0.993 | 0.997 | 0.826 | 0.0 | |
| 297814269 | 490 | kinase family protein [Arabidopsis lyrat | 0.981 | 0.989 | 0.828 | 0.0 | |
| 22328189 | 489 | BR-signaling kinase 3 [Arabidopsis thali | 0.977 | 0.987 | 0.829 | 0.0 |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/494 (88%), Positives = 459/494 (92%), Gaps = 3/494 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG QCSK CCW+SQFK +VLEAPDVD N E SEVD LP F E+T EQLKNATSGFA
Sbjct: 1 MGCQCSKLAPCCWDSQFKGSVLEAPDVD---NGEKSEVDYLPVFCEYTFEQLKNATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNR+AWPD RQF EEAR+VGQLRN+RL N
Sbjct: 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRVAWPDARQFSEEARAVGQLRNHRLAN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCE +ERLLVAEYMPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCT +GRA
Sbjct: 118 LLGCCCEDNERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYRILFDEDGNPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS
Sbjct: 178 LYHDLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT+DDGTELVRLASRCLQYEP
Sbjct: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTNDDGTELVRLASRCLQYEP 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPNPKSLV AL+PLQKETEVPSHVLMGIPHSAS SPLSPLGEACSR DLTAIHEILE
Sbjct: 298 RERPNPKSLVAALTPLQKETEVPSHVLMGIPHSASFSPLSPLGEACSRMDLTAIHEILES 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
+ YKDDEG+ NELSFQMWTDQMQETLNSKKKGD AFRQKD + AI+CYTQFID GTMVSP
Sbjct: 358 VGYKDDEGMTNELSFQMWTDQMQETLNSKKKGDAAFRQKDFRAAIDCYTQFIDVGTMVSP 417
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TV ARRSLCYLMSDMPQ+ALNDAMQAQ+ISP+WHIASYLQAAAL+ +GMENEAQ ALK+G
Sbjct: 418 TVCARRSLCYLMSDMPQEALNDAMQAQVISPVWHIASYLQAAALTGLGMENEAQAALKDG 477
Query: 481 TTLEAKKNSTAGQK 494
TTLEA++N+ +GQK
Sbjct: 478 TTLEAQRNTPSGQK 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/494 (85%), Positives = 456/494 (92%), Gaps = 3/494 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MGIQCS+ CC +SQ KA+V+E PD AE ++ SEV P+FRE+TLEQLKNATSGFA
Sbjct: 1 MGIQCSRLIPCCVDSQVKASVIETPD---AEIEDSSEVSNWPTFREYTLEQLKNATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VENIVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPD RQFLEEARSVGQLRN RL N
Sbjct: 58 VENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLAN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCEG+ERLLVAEYMPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCTSKGRA
Sbjct: 118 LLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS
Sbjct: 178 LYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALD+IR RNLQMLTDSCLEGQF+DDDGTELVRLASRCLQYEP
Sbjct: 238 FGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEP 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPNPKSLV AL+PLQKETEVPSHVLMGI HS + + LSPLGEACSR+DLTAI E+LE
Sbjct: 298 RERPNPKSLVVALAPLQKETEVPSHVLMGIQHSTTFASLSPLGEACSRKDLTAIQEVLES 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
I YKDDEGVANELSF MWTDQMQ+TLN KKKGDVAFRQKD + AIECY+QFIDAGTMVSP
Sbjct: 358 IGYKDDEGVANELSFHMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDAGTMVSP 417
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TVYARRSLCYL+SDMPQ++LNDA+QAQI+SP+WHIASYLQ+ AL+ +GMENEAQ ALKEG
Sbjct: 418 TVYARRSLCYLISDMPQESLNDAIQAQIVSPVWHIASYLQSVALTGLGMENEAQAALKEG 477
Query: 481 TTLEAKKNSTAGQK 494
TT+E+K+N+T QK
Sbjct: 478 TTMESKRNATPKQK 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504529|ref|XP_003521048.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/490 (85%), Positives = 453/490 (92%), Gaps = 3/490 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MGIQCS+ CC +SQ KA+V+E PD AE ++ SE P+FREFTLEQLKNATSGFA
Sbjct: 1 MGIQCSRLIPCCVDSQVKASVIETPD---AEIEDSSEASNWPTFREFTLEQLKNATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VENIVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPD RQFLEE+RSVGQLRN RL N
Sbjct: 58 VENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEESRSVGQLRNQRLAN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCEG+ERLLVAEYMPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCTSKGRA
Sbjct: 118 LLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS
Sbjct: 178 LYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALD+IR RNLQMLTDSCLEGQF+DDDGTELVRLASRCLQYEP
Sbjct: 238 FGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEP 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPNPKSLV AL+PLQKETEV SH+LMGI HS + + LSPLGEACSR+DLTAIHE+LE
Sbjct: 298 RERPNPKSLVAALAPLQKETEVLSHILMGIQHSTTFASLSPLGEACSRKDLTAIHEVLES 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
+ YKDDEGVANELSFQMWTDQMQ+TLN KKKGDVAFRQKD + AIECY+QFID GTMVSP
Sbjct: 358 LGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDTGTMVSP 417
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TVYARRSLCYL+SDMPQ+ALNDAMQA++ISP+WHIASYLQ+ AL+ +GMENEAQ ALKEG
Sbjct: 418 TVYARRSLCYLISDMPQEALNDAMQAEVISPVWHIASYLQSVALTGLGMENEAQAALKEG 477
Query: 481 TTLEAKKNST 490
TTLE+K+N+T
Sbjct: 478 TTLESKRNAT 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541562|ref|XP_002511845.1| receptor protein kinase, putative [Ricinus communis] gi|223549025|gb|EEF50514.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/495 (85%), Positives = 456/495 (92%), Gaps = 3/495 (0%)
Query: 1 MGIQCSKFTACCWNSQFKAT-VLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGF 59
MG CSKF CC +SQFKA V+E PD N+ SE+D LP+FREFT EQLKNATSGF
Sbjct: 1 MGSLCSKFIPCCLDSQFKAAAVVEVPDT--VGNEGKSEIDYLPAFREFTFEQLKNATSGF 58
Query: 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLT 119
AVENIVSEHGEKAPNVVYKGKLENQRRI VKRFNRMAWPD RQFLEEAR VGQLRN+RL
Sbjct: 59 AVENIVSEHGEKAPNVVYKGKLENQRRIVVKRFNRMAWPDARQFLEEARFVGQLRNHRLA 118
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
NLLGCCCEGDERLLVAEY+PNETLAKHLFHWET PMKWAMRLRV LHLA+ALEYCTSKGR
Sbjct: 119 NLLGCCCEGDERLLVAEYLPNETLAKHLFHWETQPMKWAMRLRVALHLAEALEYCTSKGR 178
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 239
ALYHDLNAYRILFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY
Sbjct: 179 ALYHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 238
Query: 240 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
SFGTLL+DLLSGKHIPP+HALDLIRDRNLQMLTDSCLEGQF++DDGTELVRLASRCLQYE
Sbjct: 239 SFGTLLVDLLSGKHIPPNHALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYE 298
Query: 300 PRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILE 359
RERP+ KSLV AL+PLQKETEVPSHVLMGIPHSAS+SPLSP+GEACSR+DLTAIHEIL+
Sbjct: 299 LRERPSSKSLVAALTPLQKETEVPSHVLMGIPHSASLSPLSPIGEACSRKDLTAIHEILD 358
Query: 360 KISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS 419
+ YKDDEGV NELSFQMWTD+MQETL KKKGD AF+QKDL+DAIECYTQFIDAGTMVS
Sbjct: 359 GLGYKDDEGVTNELSFQMWTDEMQETLTFKKKGDSAFKQKDLRDAIECYTQFIDAGTMVS 418
Query: 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
PT++ARRSL +LM+DMPQ+ALNDAMQAQ+ISP+WH+ASYLQA AL +GME EAQVALKE
Sbjct: 419 PTLFARRSLSFLMTDMPQEALNDAMQAQVISPVWHVASYLQAVALGVLGMETEAQVALKE 478
Query: 480 GTTLEAKKNSTAGQK 494
GT LEA+KN+T+ QK
Sbjct: 479 GTNLEAQKNATSEQK 493
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/494 (84%), Positives = 453/494 (91%), Gaps = 3/494 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG QC+K T CC +SQFKA V+E P V N+E SEV+ LP+FREFT EQLKNATSGFA
Sbjct: 1 MGSQCTKLTPCCLDSQFKAAVVEVPSVG---NEEKSEVNDLPTFREFTFEQLKNATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD RQFLEEARSVGQLRNNRL N
Sbjct: 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDARQFLEEARSVGQLRNNRLVN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCEGDERLLVAE+MPNETLAKHLFHWET P+KWAMRLRVVLHLA+ALEYCTSKGRA
Sbjct: 118 LLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPIKWAMRLRVVLHLAEALEYCTSKGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYRILFDEDGNP+LS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS
Sbjct: 178 LYHDLNAYRILFDEDGNPKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLD LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF++DDGTELVRLASRCLQYE
Sbjct: 238 FGTLLLDHLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYEL 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERP+ K LV AL+PLQKET+V SH+LMGIPHSAS SPLSP GEAC R+DLTAIHEIL+
Sbjct: 298 RERPSLKFLVAALTPLQKETDVASHILMGIPHSASSSPLSPFGEACLRKDLTAIHEILDN 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
I YKDD+GVANELSFQMWTD+MQETLN+KKKGD +F+QKD + AIECYTQFID GTMVSP
Sbjct: 358 IGYKDDQGVANELSFQMWTDEMQETLNTKKKGDASFKQKDFRVAIECYTQFIDVGTMVSP 417
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TV+ARRSL YLMSDMPQ+ L+DAMQAQ+ISP+WH+ASYLQA AL+ +GMENEA ALKEG
Sbjct: 418 TVFARRSLSYLMSDMPQEGLSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEG 477
Query: 481 TTLEAKKNSTAGQK 494
T +EAKKN +GQK
Sbjct: 478 TNIEAKKNQDSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064025|ref|XP_002301354.1| predicted protein [Populus trichocarpa] gi|222843080|gb|EEE80627.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/494 (83%), Positives = 455/494 (92%), Gaps = 3/494 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG QC+K T CC +SQFKA V+E PDV N++ SEV+ LP+FREFTLEQLKNATSGFA
Sbjct: 1 MGSQCTKLTRCCVDSQFKAAVVEVPDVG---NEDKSEVNDLPTFREFTLEQLKNATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
V+NIVSEHGEKAPNVVYKGKLENQRRIAVKRFN+MAWPD RQFLEEARSVGQLR++RL N
Sbjct: 58 VQNIVSEHGEKAPNVVYKGKLENQRRIAVKRFNKMAWPDARQFLEEARSVGQLRSHRLVN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLG CCEGDER+LVAE+M NETLAKHLFHWET P+KW MRLRVVLHLA+ALEYCTSKGRA
Sbjct: 118 LLGFCCEGDERVLVAEFMLNETLAKHLFHWETQPIKWPMRLRVVLHLAEALEYCTSKGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYRILFDEDGNP+LS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS
Sbjct: 178 LYHDLNAYRILFDEDGNPKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF+ DDGTELVRLASRCLQYE
Sbjct: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSSDDGTELVRLASRCLQYEL 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERP+ KSLV AL+PLQKE +VPSH+LMGIPH AS SPLSP GEACSRRDLTAI+EIL+
Sbjct: 298 RERPSLKSLVAALTPLQKENDVPSHILMGIPHGASSSPLSPFGEACSRRDLTAINEILDN 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
I YKDD+GVANELSFQMWTD+MQETLN+KKKGD AF+QKD + AIECYTQFID GTMVSP
Sbjct: 358 IGYKDDQGVANELSFQMWTDEMQETLNTKKKGDSAFKQKDYRIAIECYTQFIDVGTMVSP 417
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TV+ARRSL YLMSD+PQ+AL+DAMQAQ+ISP+WH+ASYLQA AL+ +GMENEA ALKEG
Sbjct: 418 TVFARRSLSYLMSDLPQEALSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEG 477
Query: 481 TTLEAKKNSTAGQK 494
T LEA+KN+ +GQK
Sbjct: 478 TNLEAEKNANSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/491 (83%), Positives = 444/491 (90%), Gaps = 3/491 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG QCSKF CCW+S+ K V+E P V EN+E SE D LP+F E+T++QL+ ATSGFA
Sbjct: 1 MGCQCSKFWVCCWDSEQKGLVVEPPSV---ENEENSEADDLPAFHEYTIDQLRMATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFN+ AWPD RQFLEEARSVGQLRN+RL N
Sbjct: 58 AENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNKSAWPDARQFLEEARSVGQLRNHRLAN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCC EGDERLLVAE+MPN+TLAKHLFHWET PMKWAMRLRV L+LAQALEYCTSKGRA
Sbjct: 118 LLGCCSEGDERLLVAEFMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYRI+FD+DG+PRLS FG+MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV+YS
Sbjct: 178 LYHDLNAYRIVFDDDGDPRLSCFGMMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIRDRN+QMLTDSCLEGQF+ DDGTELVRLASRCLQYEP
Sbjct: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSSDDGTELVRLASRCLQYEP 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPNPKSLV AL PLQKETEVPSHVLMG+P S + PLSPLGEAC R DLTAIHEILEK
Sbjct: 298 RERPNPKSLVAALIPLQKETEVPSHVLMGMPQSGATLPLSPLGEACLRMDLTAIHEILEK 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
+ YKDDEG ELSFQMWT+QMQETLNSKKKGDVAFR KD + AIECYTQFID GTMVSP
Sbjct: 358 LGYKDDEGATTELSFQMWTNQMQETLNSKKKGDVAFRHKDFRAAIECYTQFIDVGTMVSP 417
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TV+ARRSLCYLMSDMPQ+ALNDA+QAQ+ISPIWHIASYLQA ALSA+G ENE++V LKEG
Sbjct: 418 TVFARRSLCYLMSDMPQEALNDAVQAQVISPIWHIASYLQAVALSALGRENESEVTLKEG 477
Query: 481 TTLEAKKNSTA 491
+ LE KKN TA
Sbjct: 478 SVLEEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507281|ref|XP_003623929.1| hypothetical protein MTR_7g077150 [Medicago truncatula] gi|355498944|gb|AES80147.1| hypothetical protein MTR_7g077150 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/495 (82%), Positives = 446/495 (90%), Gaps = 4/495 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MGIQCS CC +SQ KA+V E PD AEN+ E + PSFREFTLEQL NATSGF
Sbjct: 1 MGIQCSSLVPCCVDSQVKASVPEVPD---AENENRIETNDGPSFREFTLEQLNNATSGFN 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VENIVSEHGEKAPNVVYKGK+ENQ RI VKRFNR AWPD RQFLEEARSVGQLR+ RL N
Sbjct: 58 VENIVSEHGEKAPNVVYKGKMENQTRIVVKRFNRSAWPDARQFLEEARSVGQLRSERLAN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCE DERLLVAEYMPNETLAKHLFHW++ PMKWAMRLRVVLHLA+ALEYCTS GRA
Sbjct: 118 LLGCCCEDDERLLVAEYMPNETLAKHLFHWDSQPMKWAMRLRVVLHLAEALEYCTSNGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS
Sbjct: 178 LYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIRDRN+QMLTDSCLEGQF++DDGTELVRLASRCLQYEP
Sbjct: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSEDDGTELVRLASRCLQYEP 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSP-LSPLGEACSRRDLTAIHEILE 359
RERPN KSLV AL+PLQKETEVPSH LMGI HSA++S LSPLG+ACSR+DLTAIHE+LE
Sbjct: 298 RERPNTKSLVAALAPLQKETEVPSHSLMGIQHSATISASLSPLGDACSRKDLTAIHEVLE 357
Query: 360 KISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS 419
I YKDD+GVANELSFQMWTDQMQ++LN K+KGD AFR KD K AIECYTQFID GTMVS
Sbjct: 358 NIGYKDDDGVANELSFQMWTDQMQDSLNCKQKGDAAFRHKDFKLAIECYTQFIDVGTMVS 417
Query: 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
PTV+ARRSLCYL++DMPQ+A+NDAMQAQ+ISP+WHIASYLQ+ +LS +GM NEAQVAL E
Sbjct: 418 PTVHARRSLCYLINDMPQEAMNDAMQAQVISPLWHIASYLQSVSLSGLGMVNEAQVALME 477
Query: 480 GTTLEAKKNSTAGQK 494
GTTLE K+N+ G+K
Sbjct: 478 GTTLEEKRNTPTGKK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297814269|ref|XP_002875018.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320855|gb|EFH51277.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/489 (82%), Positives = 447/489 (91%), Gaps = 4/489 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG QCS + CC NS K VLEAP VD N E SE+ +P+FRE+TLEQLK ATSGFA
Sbjct: 1 MGGQCSSLSQCCRNSSHKTAVLEAPYVD---NGESSEITDVPNFREYTLEQLKAATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VE IVSEHGEKAPNVVYKGKLENQ++IAVKRF RMAWPD RQFLEEARSVGQLR+ R+ N
Sbjct: 58 VEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDARQFLEEARSVGQLRSERMAN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCEGDERLLVAE+MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR
Sbjct: 118 LLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRT 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYS
Sbjct: 178 LYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE
Sbjct: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEA 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPN KSLVTAL+PLQK+TEVPSHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EIL+K
Sbjct: 298 RERPNTKSLVTALTPLQKDTEVPSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILDK 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
+ YKDDEGV NELSFQMWTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SP
Sbjct: 358 LGYKDDEGVTNELSFQMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISP 416
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+ASYLQ+A+L+ +GME E+Q+ALKEG
Sbjct: 417 TVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLAFLGMEKESQIALKEG 476
Query: 481 TTLEAKKNS 489
+ LEAK+N+
Sbjct: 477 SNLEAKRNA 485
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22328189|ref|NP_191980.2| BR-signaling kinase 3 [Arabidopsis thaliana] gi|17064838|gb|AAL32573.1| Unknown protein [Arabidopsis thaliana] gi|20259854|gb|AAM13274.1| unknown protein [Arabidopsis thaliana] gi|332656524|gb|AEE81924.1| BR-signaling kinase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/488 (82%), Positives = 443/488 (90%), Gaps = 5/488 (1%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG QCS + CC N+ K VLEAPDVD N E SE+ +P+FRE+TLEQLK ATSGFA
Sbjct: 1 MGGQCSSLS-CCRNTSHKTAVLEAPDVD---NGESSEITDVPNFREYTLEQLKAATSGFA 56
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VE IVSEHGEKAPNVVYKGKLENQ++IAVKRF RMAWPD RQFLEEARSVGQLR+ R+ N
Sbjct: 57 VEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMAN 116
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCEGDERLLVAE+MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR
Sbjct: 117 LLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRT 176
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYS
Sbjct: 177 LYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYS 236
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE
Sbjct: 237 FGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEA 296
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPN KSLVTAL+PLQKETEV SHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EILEK
Sbjct: 297 RERPNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEK 356
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
+ YKDDEGV NELSF MWTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SP
Sbjct: 357 LGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISP 415
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+ASYLQ+A+L +GME E+Q+ALKEG
Sbjct: 416 TVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEG 475
Query: 481 TTLEAKKN 488
+ LEAK N
Sbjct: 476 SNLEAKMN 483
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | ||||||
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.977 | 0.987 | 0.829 | 8.8e-221 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.981 | 0.995 | 0.784 | 3.5e-210 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.979 | 0.993 | 0.758 | 8.8e-205 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.973 | 0.983 | 0.736 | 1.8e-197 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.975 | 0.983 | 0.721 | 6e-190 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.973 | 0.995 | 0.722 | 3.4e-187 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.904 | 0.873 | 0.653 | 5e-163 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.943 | 0.952 | 0.592 | 2.8e-153 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.925 | 0.958 | 0.620 | 1.2e-150 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.973 | 0.963 | 0.567 | 4e-145 |
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2132 (755.6 bits), Expect = 8.8e-221, P = 8.8e-221
Identities = 405/488 (82%), Positives = 443/488 (90%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG QCS + CC N+ K VLEAPDVD N E SE+ +P+FRE+TLEQLK ATSGFA
Sbjct: 1 MGGQCSSLS-CCRNTSHKTAVLEAPDVD---NGESSEITDVPNFREYTLEQLKAATSGFA 56
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
VE IVSEHGEKAPNVVYKGKLENQ++IAVKRF RMAWPD RQFLEEARSVGQLR+ R+ N
Sbjct: 57 VEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMAN 116
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCCCEGDERLLVAE+MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR
Sbjct: 117 LLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRT 176
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYS
Sbjct: 177 LYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYS 236
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE
Sbjct: 237 FGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEA 296
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPN KSLVTAL+PLQKETEV SHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EILEK
Sbjct: 297 RERPNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEK 356
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
+ YKDDEGV NELSF MWTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SP
Sbjct: 357 LGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISP 415
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+ASYLQ+A+L +GME E+Q+ALKEG
Sbjct: 416 TVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEG 475
Query: 481 TTLEAKKN 488
+ LEAK N
Sbjct: 476 SNLEAKMN 483
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2032 (720.4 bits), Expect = 3.5e-210, P = 3.5e-210
Identities = 383/488 (78%), Positives = 427/488 (87%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG + SK A C S + + V + D E + LP FREF++E L+NATSGFA
Sbjct: 1 MGCEVSKLCAFCCVSDPEGS---NHGVTGLDEDRRGEGNDLPQFREFSIETLRNATSGFA 57
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
ENIVSEHGEKAPNVVYKGKL+NQRRIAVKRFNR AWPD RQFLEEA++VGQLRN R+ N
Sbjct: 58 TENIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMAN 117
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLGCC EG+ERLLVAE+MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCT KGRA
Sbjct: 118 LLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRA 177
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV+YS
Sbjct: 178 LYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYS 237
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
+GTLLLDLLSGKHIPPSHALDLIRDRN+QML DSCLEGQF+ DDGTEL+RLASRCLQYEP
Sbjct: 238 YGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEP 297
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 360
RERPNPKSLVTA+ PLQK+ E PSH LMGIP SAS +PLSPLGEAC R DLTAIHEILEK
Sbjct: 298 RERPNPKSLVTAMIPLQKDLETPSHQLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEK 357
Query: 361 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP 420
+SYKDDEG A ELSFQMWT+QMQ++LN KKKGDVAFR K+ +AI+CY+QFI+ GTMVSP
Sbjct: 358 LSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSP 417
Query: 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
TVYARRSLCYLM++MPQ+ALNDAMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+G
Sbjct: 418 TVYARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASYLQAVALSALGQENEAHAALKDG 477
Query: 481 TTLEAKKN 488
+ LE+K+N
Sbjct: 478 SMLESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1981 (702.4 bits), Expect = 8.8e-205, P = 8.8e-205
Identities = 371/489 (75%), Positives = 424/489 (86%)
Query: 1 MGIQCSKFTA-CCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGF 59
MG + SK +A CC + ++ PDV + + E + LP FREF++E ++NATSGF
Sbjct: 1 MGCEVSKLSALCCVSESGRSN----PDVTGLDEEGRGESNDLPQFREFSIETIRNATSGF 56
Query: 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLT 119
A ENIVSEHGE+APNVVYKGKLENQRRIAVKRFNR +WPD RQFLEEA++VGQLRN+R+
Sbjct: 57 AAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMA 116
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
NLLGCC E +ERLL+AE+MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCTSKGR
Sbjct: 117 NLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGR 176
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 239
ALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY
Sbjct: 177 ALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 236
Query: 240 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
SFGTLLLDLLSGKHIPPSHALDLIRDRN+QML DS LEGQF+ DDGTEL+RLASRCLQYE
Sbjct: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYE 296
Query: 300 PRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILE 359
PRERPNPKSLV+A+ PLQK+ E+ SH L+G+P+SA+ + LSPLGEAC R DLTAIHEI+E
Sbjct: 297 PRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIE 356
Query: 360 KISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS 419
K+ YKDDEG ELSFQMWTDQMQ+TL KKKGD AFR KD AIECY+QFI+ GTM S
Sbjct: 357 KLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGS 416
Query: 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
PTV+AR+SLCYLM+DMP++ALN+AMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+
Sbjct: 417 PTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKD 476
Query: 480 GTTLEAKKN 488
G LE+K+N
Sbjct: 477 GAMLESKRN 485
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1912 (678.1 bits), Expect = 1.8e-197, P = 1.8e-197
Identities = 364/494 (73%), Positives = 423/494 (85%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG +CSK + C W + K+T EA D+D +D LPSF EF+ +QL+ AT GF+
Sbjct: 1 MGPRCSKLSLCWWPTHLKSTHNEASDLDNGTDD-------LPSFTEFSFDQLRAATCGFS 53
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
++IVSEHG KAPNVVYKG+LE+ R IAVKRFNR AWPD RQFLEEA++VGQLRN RL N
Sbjct: 54 TDSIVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLAN 113
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
L+G CCEGDERLLVAE+MP ETL+KHLFHW++ PMKW+MRLRV L+LAQALEYC+SKGRA
Sbjct: 114 LIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRA 173
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YS
Sbjct: 174 LYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYS 233
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLLSGKHIPPSHALDLIR +N ML DSCL+G F++DDGT+LVRLASRCLQYE
Sbjct: 234 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEA 293
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSP-----LSPLGEACSRRDLTAIH 355
RERPN KSLV++L+PLQKET++PSHVLMGIPH A+ SP L+PLG+ACSR DLTAIH
Sbjct: 294 RERPNVKSLVSSLAPLQKETDIPSHVLMGIPHGAA-SPKETTSLTPLGDACSRHDLTAIH 352
Query: 356 EILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG 415
EILEK+ YKDDEGVANELSFQ+WTDQ+QETLNSKK+GD AF+ KD A+ECYTQFI+ G
Sbjct: 353 EILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDG 412
Query: 416 TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 475
TMVSPTV+ARR LCYLMS+MPQ+AL DAMQAQ++SP W A YLQAAAL ++GM+ +A
Sbjct: 413 TMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACE 472
Query: 476 ALKEGTTLEAKKNS 489
LK+GT+LEAKK++
Sbjct: 473 TLKDGTSLEAKKHN 486
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1841 (653.1 bits), Expect = 6.0e-190, P = 6.0e-190
Identities = 357/495 (72%), Positives = 420/495 (84%)
Query: 1 MGIQCSKFTACCWNSQFK-ATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGF 59
MG +CSKF+ C + S FK A+VLE+PD+ EN +V P+F+EF LEQLK+AT GF
Sbjct: 1 MGARCSKFSFCLFPSHFKSASVLESPDI---ENG--GKV--WPTFKEFKLEQLKSATGGF 53
Query: 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLT 119
+ +NIVSEHGEKAPNVVY+G+L++ R IAVKRFNR+AW D RQFL+EA++VG LR++RL
Sbjct: 54 SSDNIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHRQFLDEAKAVGSLRSDRLA 113
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
NL+GCC EG+ERLLVAE+MP+ETLAKHLFHWE +PMKWAMRLRV L LAQALEYC++KGR
Sbjct: 114 NLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGR 173
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 239
ALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV++
Sbjct: 174 ALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVF 233
Query: 240 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
SFGT+LLDL+SGKHIPPSHALDLIR +N ML DS LEG F+++DGTELVRLA+RCLQYE
Sbjct: 234 SFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYE 293
Query: 300 PRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASV---SPLS--PLGEACSRRDLTAI 354
RERPN KSLVT+L LQKE++V S+VLMGIPH SPLS P G+AC R DLTAI
Sbjct: 294 ARERPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAI 353
Query: 355 HEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA 414
EIL KI YKDDEG+ANELSFQMWT+QMQE+LNSKK+GD+AFR KD A++CYTQFID
Sbjct: 354 QEILSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDG 413
Query: 415 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 474
GTMVSPTV+ARR L YLM+D Q+AL DA+QAQ++SP W A YLQAA L +GME +AQ
Sbjct: 414 GTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQ 473
Query: 475 VALKEGTTLEAKKNS 489
ALK+GTTLEAKK++
Sbjct: 474 QALKDGTTLEAKKSN 488
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1815 (644.0 bits), Expect = 3.4e-187, P = 3.4e-187
Identities = 357/494 (72%), Positives = 411/494 (83%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFA 60
MG Q SK CC K T LEAPDV EN E EV+G+ SFRE++LEQLK ATS FA
Sbjct: 1 MGGQSSKIGTCC---SHKTTALEAPDV---ENKENGEVNGVHSFREYSLEQLKIATSCFA 54
Query: 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
+EN+VSEHGE APNVVY+GKLEN +IA+KRF+ AWPDPRQFLEEAR VGQLR+ R+ N
Sbjct: 55 LENVVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMAN 114
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
LLG CCEG ERLLVAE+MPNETLAKHLFHW+T PMKWAMRLRV L++++ALEYC++ G
Sbjct: 115 LLGYCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHT 174
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+T ESVIYS
Sbjct: 175 LYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYS 234
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FGTLLLDLL+GKHIPPSHALDLIRDRNLQ LTDSCLEGQF+D DGTELVRL S CLQYE
Sbjct: 235 FGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEA 294
Query: 301 RERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS-VSPLSPLGEACSRRDLTAIHEILE 359
RERPN KSLVTAL LQK+TEV SHVLMG+P S + SP SP EACS +DLT++ EILE
Sbjct: 295 RERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILE 354
Query: 360 KISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS 419
KI YKDDE +LSF MWT+QMQE +NSKKKGD+AFR+KD +AIE YTQF+D G M+S
Sbjct: 355 KIGYKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MIS 408
Query: 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
TV RRS YLMS+M ++AL+DAM+AQ ISP+W++A YLQ+AALS +GME E+Q+AL E
Sbjct: 409 ATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTE 468
Query: 480 GTTLEAKKNSTAGQ 493
G+ LEA+K S + Q
Sbjct: 469 GSILEARKISASTQ 482
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1587 (563.7 bits), Expect = 5.0e-163, P = 5.0e-163
Identities = 296/453 (65%), Positives = 366/453 (80%)
Query: 40 GLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD 99
G+PSF EF+ LK AT+ F+ +NIVSE GEKAPN+VYKG+L+N+R IAVK+F +MAWP+
Sbjct: 54 GIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPE 113
Query: 100 PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAM 159
P+QF EEA VG+LR+NRL NL+G CC+GDERLLVAE+MPN+TLAKHLFHWE ++WAM
Sbjct: 114 PKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAM 173
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 219
RLRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKSYSTNL
Sbjct: 174 RLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNL 233
Query: 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279
A+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS LEG+
Sbjct: 234 AYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGK 293
Query: 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-----SA 334
F+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI S
Sbjct: 294 FSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPST 353
Query: 335 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 394
PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K+GD
Sbjct: 354 PQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQ 412
Query: 395 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 454
+FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ + P W
Sbjct: 413 SFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWP 472
Query: 455 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487
A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 473 TAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1495 (531.3 bits), Expect = 2.8e-153, P = 2.8e-153
Identities = 278/469 (59%), Positives = 364/469 (77%)
Query: 24 APDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLEN 83
AP+ + N + + + + +F+EF L +L+ AT+GF+ IVSE GEKAPNVVY+GKLE
Sbjct: 19 APNKPESVNGDQVDQE-IQNFKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYRGKLEG 77
Query: 84 QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143
+A+KRF+R +WPD +QF+ EA VG+LRN R+ +L+GCC EGDERLLVAEYMPN+TL
Sbjct: 78 NHLVAIKRFSRQSWPDAQQFVVEATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTL 137
Query: 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203
+KHLFHWE P+ W MR+R+ ++A+AL+YC + R +YHDLNAYRILFDE+G+PRLSTF
Sbjct: 138 SKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTF 197
Query: 204 GLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263
GLMKNSRDGKSYSTNLA+TPPE+LRTGRV PESVI+S+GT+LLDLLSGKHIPPSHALD+I
Sbjct: 198 GLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDII 257
Query: 264 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 323
R +N +L DS LEGQ+ +DD T+LV LAS+CLQ E ++RP+ K L++A++PLQK+ EV
Sbjct: 258 RGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVA 317
Query: 324 SHVLMGIPHSASVSP--LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQ 381
SHVLMG+P + + P LSPLG+AC++ DL H+IL K Y+D+EG NELSFQ WT Q
Sbjct: 318 SHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQ 377
Query: 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 441
+QE LN+KK GD+AFR KD K++IE Y++ + + S TV+ARR+ YLM+D + AL
Sbjct: 378 VQEMLNTKKFGDIAFRDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALR 437
Query: 442 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490
DAMQAQ+ P W A YLQA ALS +GME +AQ L +G +AK+ ++
Sbjct: 438 DAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDMLNDGAAYDAKRQNS 486
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 289/466 (62%), Positives = 352/466 (75%)
Query: 29 AAENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIA 88
AA+N E E P+F EF+LEQL+ AT GF+ +NIVSEH E+ PN+VYKG+L + R+IA
Sbjct: 11 AADNKEEDEGSTCPNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIA 70
Query: 89 VKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF 148
VKRF R++WPD +F+EEA++VG+ R+ + NL+GCC EG ERLLVAEYMPNETLAKHLF
Sbjct: 71 VKRFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLF 130
Query: 149 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208
HWE PMKW MRLRV LH A ALEYC G LYHDLN YRILFD+ GNPRLS FGLMK
Sbjct: 131 HWEKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKC 190
Query: 209 SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 268
SR+GKSYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL R +N
Sbjct: 191 SREGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNY 250
Query: 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV-PSHVL 327
+L DS L+GQF+D+D TEL+ LASRCL+ EP ERP+ K L++ALS L+K E+ P+
Sbjct: 251 LVLMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKE 310
Query: 328 MGIPHSASVSP-------LSPLGEACSRRDLTAIHEILEKISY-KDDEGVANELSFQMWT 379
IP + P L+P GEAC R DL+ +HE+LEK+ Y +DD V NE SFQMWT
Sbjct: 311 ENIPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWT 370
Query: 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDA 439
QMQE ++ KK GD AFR KD + AIE YT+F+ +VSPTV ARR LCYLMSDM ++A
Sbjct: 371 GQMQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREA 430
Query: 440 LNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 485
L+DAMQ Q+ SP + IA YLQAA L +GME EA+ AL+ G++LEA
Sbjct: 431 LSDAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
|
| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 285/502 (56%), Positives = 357/502 (71%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVDAAEN--DEMSEVDG--LPS-FREFTLEQLKNA 55
MG C K W + + + +D EN + ++ DG P FREF+LEQL+ A
Sbjct: 1 MGCICFK----SWRRSSSSPSITSTVIDDLENVREYDADDDGGHYPLIFREFSLEQLRIA 56
Query: 56 TSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN 115
T GF+ NIVSEH + PN+VYKGKL + RRIAVKRF R++WPDP +F+ EA++VG+LR+
Sbjct: 57 TDGFSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEFINEAQAVGRLRS 116
Query: 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT 175
+ NL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE PMKW MRL+V LH A+ALEYC
Sbjct: 117 EHMANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCN 176
Query: 176 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPE 235
KG LYHDLN YRI+FD+ G P+LS FGLMKNS +GK YSTNLAF PPEYLR G V E
Sbjct: 177 DKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAE 236
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295
SV +SFGTLLLDL+SG+HIPP+HALDL R +N +L DS L+GQF+D+D TEL+ +ASRC
Sbjct: 237 SVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDEDRTELIHVASRC 296
Query: 296 LQYEPRERPNPKSLVTALSPLQKETEV-PSHVLMGI-PHSASV----SP------LSPLG 343
+ EP ERP+ K L LS LQK ++ P +V + P S ++ P L+P G
Sbjct: 297 FKTEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTKPATESLKLTPFG 356
Query: 344 EACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKD 403
+ACSR DL++IHE+LEK+ Y++D GV NE SFQMWT +MQE ++ KK GD AF KD
Sbjct: 357 DACSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKHGDAAFLAKDFDT 416
Query: 404 AIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463
AIE YT+F+ VSPTV ARR LCYLM++M +AL+DAMQAQ+ SP W I YLQAA
Sbjct: 417 AIEFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASPEWPIPLYLQAAC 476
Query: 464 LSAMGMENEAQVALKEGTTLEA 485
L + ME EA+ AL+ G+ LEA
Sbjct: 477 LFKLEMEAEAKEALRHGSALEA 498
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FHD7 | Y5126_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7586 | 0.9797 | 0.9938 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 494 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 4e-29 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-23 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-22 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-21 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-21 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-19 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-19 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-17 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-16 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-15 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-14 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-14 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 5e-14 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 3e-13 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 4e-12 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-11 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-11 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 3e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-11 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 5e-11 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 6e-11 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-11 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 7e-11 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 7e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-10 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 1e-09 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-09 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-09 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-09 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 2e-09 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 3e-09 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-09 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 7e-09 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 8e-09 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 9e-09 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-08 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 2e-08 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-08 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-08 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 4e-08 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 5e-08 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 8e-08 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-07 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-07 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 3e-07 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 4e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 5e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 7e-07 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 7e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 7e-07 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 8e-07 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-06 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-06 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 1e-06 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-06 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 2e-06 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-06 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 3e-06 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 4e-06 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-06 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 5e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 9e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 1e-05 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-05 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-05 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-05 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-05 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-05 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 2e-05 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-05 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-05 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-05 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-05 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-05 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 4e-05 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 4e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 4e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 5e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 5e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 6e-05 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 6e-05 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-05 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 7e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-04 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-04 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 2e-04 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-04 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-04 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-04 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 3e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 3e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 4e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 4e-04 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 7e-04 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 7e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 7e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.001 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 0.001 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.001 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 0.001 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.001 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 0.002 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.002 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.003 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 0.003 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 0.003 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 0.003 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 0.003 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.003 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 0.004 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.004 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 4e-29
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 49/245 (20%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
VY + + +++A+K + + L E + +L + + L G + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
LV EY +L L E + LR++L + + LEY S G + H DL IL
Sbjct: 68 LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 192 FDED-GNPRLSTFGLMKNSRDGKSYST----NLAFTPPEYLR-TGRVTPESVIYSFGTLL 245
D D G +L+ FGL K KS A+ PE L G + +S I+S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+L DLIR + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 306 PKSLV 310
K ++
Sbjct: 208 AKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 97.6 bits (244), Expect = 5e-23
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 75 VVYKGKL-----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG L + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
+ ++V EYMP L +L + + L L +A+ +EY SK H DL A
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 131
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 242
L E+ ++S FGL ++ D Y + PE L+ G+ T +S ++SFG
Sbjct: 132 RNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFG 191
Query: 243 TLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
LL ++ + G+ + + L+ ++ +C EL +L +C
Sbjct: 192 VLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLMLQCWA 242
Query: 298 YEPRERPNPKSLVTAL 313
+P +RP LV L
Sbjct: 243 EDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 3e-22
Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 20/249 (8%)
Query: 75 VVYKGKLEN-QRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
VYK K + + +AVK + E R + +L + + L+ + D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 132 LLVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
LV EY L +L P+ ++ L + + LEY S G + H DL
Sbjct: 74 YLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPEN 128
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR-VTPESVIYSFGTL 244
IL DE+G +++ FGL K S T TP PE L G P+ ++S G +
Sbjct: 129 ILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVI 188
Query: 245 LLDLLSGKHI-PPSHALDLIR--DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
L +LL+GK + LD ++ R L + + E L +CL +P
Sbjct: 189 LYELLTGKPPFSGENILDQLQLIRRILGPPLEF--DEPKWSSGSEEAKDLIKKCLNKDPS 246
Query: 302 ERPNPKSLV 310
+RP + ++
Sbjct: 247 KRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 3e-22
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 75 VVYKGKLE-----NQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKGKL+ + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
+ +V EYM L +L + + L L +A+ +EY SK H DL A
Sbjct: 74 EPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 130
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 242
L E+ ++S FGL ++ D Y + PE L+ G+ T +S ++SFG
Sbjct: 131 RNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFG 190
Query: 243 TLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
LL ++ + G+ + L+ +++ +C EL L +C
Sbjct: 191 VLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLMLQCWA 241
Query: 298 YEPRERPNPKSLVTAL 313
+P +RP LV L
Sbjct: 242 EDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 93.0 bits (232), Expect = 2e-21
Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 75 VVYKGKL-----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG L + ++AVK A + R+ FLEEA + +L + + LLG C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
+ +V EYMP L L + L++ L +A+ +EY SK H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130
Query: 188 YRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSF 241
L E+ ++S FGL ++ D P PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 242 GTLLLDLLSG-----KHIPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRC 295
G LL ++ + + L+L+ D ++ ++C + EL L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGY-RLPRPENCPD---------ELYELMLQC 240
Query: 296 LQYEPRERPNPKSLVTAL 313
Y+P +RP LV L
Sbjct: 241 WAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 3e-21
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 75 VVYKGKL----ENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGD 129
VYKGKL +AVK A + R FL+EAR + +L + + LLG C E +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 130 ERLLVAEYMPNETLAKHL-------FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
LV EYM L +L E + L + +A+ +EY SK + ++
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPES 236
DL A L ED ++S FGL ++ D Y + + PE L+ G T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188
Query: 237 VIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
++SFG LL ++ + G + L+ +R + C + EL L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239
Query: 292 ASRCLQYEPRERPNPKSLVTAL 313
C Q +P +RP LV L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 87.6 bits (218), Expect = 2e-19
Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 75 VVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
VY + + + +A+K + D + L E + + +L++ + L + D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL---NAYR 189
LV EY L L A + + ALEY SKG ++ DL N
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYLHSKGI-VHRDLKPEN--- 127
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLL 246
IL DEDG+ +L+ FGL + G+ +T + PE L I+S G +L
Sbjct: 128 ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILY 187
Query: 247 DLLSGK-----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
+LL+GK I + +L+R + L +P
Sbjct: 188 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLVKDPE 240
Query: 302 ERPNPKSL 309
+R +
Sbjct: 241 KRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 3e-19
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
VYKG L+ +AVK R P R+FL+EA + Q + + L+G C + +
Sbjct: 11 VYKGVLKGNTEVAVKTC-RSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYI 69
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V E +P +L L + + + L++ L A +EY SK ++ DL A L
Sbjct: 70 VMELVPGGSLLTFL-RKKKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVG 127
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLL 246
E+ ++S FG M +G Y+ + + +T PE L GR T ES ++S+G LL
Sbjct: 128 ENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLW 186
Query: 247 DLLSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEP 300
+ S P + I + +M C E E+ RL +C Y+P
Sbjct: 187 ETFSLGDTPYPGMSNQQTRERI-ESGYRMPAPQLCPE---------EIYRLMLQCWAYDP 236
Query: 301 RERP 304
RP
Sbjct: 237 ENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 6e-17
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 16/244 (6%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V G Q+ +AVK + + FL EA + LR+ L LLG +G+ +V
Sbjct: 22 VMLGDYRGQK-VAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L +L + A +L L + + +EY K ++ DL A +L ED
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSED 138
Query: 196 GNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 254
++S FGL K + G S + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 255 P-PSHALDLIRDR---NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
P P L + +M EG E+ ++ C + +P +RP K L
Sbjct: 199 PYPRIPLKDVVPHVEKGYRM---EAPEGC-----PPEVYKVMKDCWELDPAKRPTFKQLR 250
Query: 311 TALS 314
L+
Sbjct: 251 EQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 80.6 bits (197), Expect = 2e-16
Identities = 75/365 (20%), Positives = 127/365 (34%), Gaps = 35/365 (9%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLR-NNRL 118
I+ + GE + VY + +++ +A+K + +FL E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 119 TNLLGCCCEGDERLLVAEYMPNETLAKHL-FHWETHPMKWAMRLRVVLHLAQALEYCTSK 177
L + LV EY+ +L L P+ + L ++ + ALEY SK
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 178 GRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDGKSYSTN----------LAFTPPEY 226
G ++ D+ IL D DG +L FGL K D S S+ + PE
Sbjct: 121 G-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 227 LR---TGRVTPESVIYSFGTLLLDLLSGKH--------IPPSHALDLIRDRNLQMLTDSC 275
L + S I+S G L +LL+G S L +I + L
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239
Query: 276 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA--LSPLQKETEVPSHVLMGIPHS 333
+ L + L +P+ R + S ++ L+ L+ + S +L +
Sbjct: 240 SP-SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSA 298
Query: 334 ASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGD 393
L P EA I DD + EL+ + + +
Sbjct: 299 PLRLSLPPSLEALISS--LNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTA 356
Query: 394 VAFRQ 398
+ R
Sbjct: 357 SSKRS 361
|
Length = 384 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 3e-15
Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 14/238 (5%)
Query: 76 VYKGKLE-NQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
V+ G+L + +AVK PD + +FL+EAR + Q + + L+G C + +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V E + L E +K +++V + A +EY SK ++ DL A L
Sbjct: 71 VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVT 128
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
E ++S FG+ + DG ST + +T PE L GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188
Query: 248 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
S +P ++ + ++ + + + + + RL RC +Y+P +RP+
Sbjct: 189 AFSLGAVPYAN----LSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 1e-14
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
GE V +G+ Q+ +AVK N + FLEE + +L + L LLG
Sbjct: 15 GEGEFGAVLQGEYTGQK-VAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+ +V E M L L + L+ L +A+ +EY SK + ++ DL A
Sbjct: 71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129
Query: 189 RILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
IL EDG ++S FGL + S + + +T PE L+ + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189
Query: 248 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE----LVRLASRCLQYEPRE 302
+ S G+ P +L +++ C+E + + + L + C + EP++
Sbjct: 190 VFSYGRAPYPKMSLKEVKE---------CVEKGYRMEPPEGCPADVYVLMTSCWETEPKK 240
Query: 303 RPNPKSLVTALSPLQKE 319
RP+ L L+KE
Sbjct: 241 RPSFHKLR---EKLEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 1e-14
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 21/251 (8%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
V+KG L+++ +AVK + + +FL EAR + Q + + L+G C + +V
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
E +P L + +K ++ L A + Y SK ++ DL A L E
Sbjct: 71 MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+ ++S FG+ + DG S+ L +T PE L GR + ES ++S+G LL +
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188
Query: 250 SGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 308
S P P R++ + SC Q DD + ++ RC Y+P RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSC--PQKCPDD---VYKVMQRCWDYKPENRPK--- 240
Query: 309 LVTALSPLQKE 319
S LQKE
Sbjct: 241 ----FSELQKE 247
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 5e-14
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 26/261 (9%)
Query: 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV+ GK + +A+K M+ D F+EEA+ + +L + L L
Sbjct: 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDD---FIEEAKVMMKLSHPNLVQLY 65
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRA 180
G C + +V EYM N L +L K L + + +A+EY S G
Sbjct: 66 GVCTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-F 121
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPE 235
++ DL A L ED ++S FGL + D + S+ + + PPE R + +
Sbjct: 122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSK 181
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD---GTELVRLA 292
S ++SFG L+ ++ S +P R N +++ +S G TE+ +
Sbjct: 182 SDVWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAGYRLYRPKLAPTEVYTIM 234
Query: 293 SRCLQYEPRERPNPKSLVTAL 313
C +P +RP K L++ L
Sbjct: 235 YSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 3e-13
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 26/241 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++A+K + + P FL EA + QL++ RL L + + ++
Sbjct: 22 VWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIYIIT 79
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L E + + + +A+ + + K ++ DL A IL E
Sbjct: 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSET 138
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 139 LCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 196
Query: 249 LSGKHIP-PSHA-LDLIR--DRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
++ IP P ++I+ +R +M D+C E EL L C + +P ER
Sbjct: 197 VTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEER 247
Query: 304 P 304
P
Sbjct: 248 P 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 39/266 (14%)
Query: 76 VYKGKLENQR-----RIAVKRFNRMAWPDPRQFLEEARSVGQLRN---NRLTNLLGCCCE 127
V + + ++AVK N R E R + LR + G C +
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77
Query: 128 GDER--LLVAEYMPNETLAKHL-FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 184
R L+ EY+P+ +L +L H + +K L + + ++Y S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 185 LNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFTP-----PEYLRTGRVTPESV 237
L A IL + + ++S FGL K Y +P PE LRT + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 238 IYSFGTLLLDLLS-GKH--IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR---- 290
++SFG L +L + G PP+ L +I QM+ LE +G L R
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE---LLKEGERLPRPPSC 251
Query: 291 ------LASRCLQYEPRERPNPKSLV 310
L C + EP++RP+ L+
Sbjct: 252 PDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 7e-12
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 21/223 (9%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL-FHWETHPMKWAMRL 161
F E A + QL + L G C GDE ++V EY+ +L +L + + W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 217
V LA AL + KG L H ++ A +L + + + +K S G S +
Sbjct: 104 EVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 218 -----NLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 271
+ + PPE + + ++ + +SFGT L ++ SG P S ALD + LQ
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218
Query: 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
D Q TEL L ++C+ YEP RP+ ++++ L+
Sbjct: 219 ED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 1e-11
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 77 YKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVA 135
Y+G ++AVK A + FL EA + QLR++ L LLG E L +V
Sbjct: 27 YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L +L + L+ L + +A+EY + ++ DL A +L ED
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138
Query: 196 GNPRLSTFGLMKNSRDGKSYST-NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 254
++S FGL K + + + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 255 P 255
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VV GK Q +A+K + + +F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
EYM N L +L + L + + + + Y SK + ++ DL A L D+
Sbjct: 78 TEYMSNGCLLNYLREHGKRFQP-SQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDD 135
Query: 195 DGNPRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
G ++S FGL + D + S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 136 QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195
Query: 250 SGKHIP 255
S +P
Sbjct: 196 SLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 3e-11
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGC 124
V E G +V+ G +R++A+K R F+EEA+ + +L + +L L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 125 CCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY 182
C E LV E+M + L+ +L K++ L + L + + + Y S ++
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESV 237
DL A L E+ ++S FG+ + D + S+ + ++ PE + + +S
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183
Query: 238 IYSFGTLLLDLLSGKHIP 255
++SFG L+ ++ S P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 3e-11
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 32/255 (12%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VV+ GK Q ++A+K N A + F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
E+M N L +L + K M L + + + +EY ++ DL A L
Sbjct: 78 TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSS 135
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
G ++S FG+ + D + S++ A ++PPE + + +S ++SFG L+ ++
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR--LAS--------RCLQYE 299
+ +P + N +++ G L R LAS C +
Sbjct: 196 TEGKMP------FEKKSNYEVVEMI--------SRGFRLYRPKLASMTVYEVMYSCWHEK 241
Query: 300 PRERPNPKSLVTALS 314
P RP L+ A++
Sbjct: 242 PEGRPTFAELLRAIT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETL 143
+AVK R + +E + L + + GCC E + L+ EY+P +L
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203
+L H + A L + + + Y S+ ++ DL A +L D D ++ F
Sbjct: 96 RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 204 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 253
GL K +G Y + + + E L+ + + S ++SFG L +LL+ K
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211
Query: 254 IPPSHALDLIRDRNLQM----LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNP 306
PP ++I + QM L + G + E+ L C + E + RP
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271
Query: 307 KSLVTAL 313
+SL+ L
Sbjct: 272 RSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 3e-11
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 21/245 (8%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
VYK + + +A+K + + + E + + + ++ + G + DE +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 134 VAEYMPNETLAKHL-FHWETHPMKW-AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
V E+ +L L +T A + +L + LEY S G ++ D+ A IL
Sbjct: 75 VMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL---KGLEYLHSNGI-IHRDIKAANIL 130
Query: 192 FDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
DG +L FGL + +++ + + PE + ++ I+S G ++L
Sbjct: 131 LTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIEL 190
Query: 249 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG----TELVRLASRCLQYEPRERP 304
GK PP +L + L + G + E +CLQ P +RP
Sbjct: 191 AEGK--PPYS--ELPPMKALFKIAT---NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRP 243
Query: 305 NPKSL 309
+ L
Sbjct: 244 TAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + P FL+EA+ + +LR+++L L C E + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L E ++ + + +A+ + Y S+ ++ DL A IL E+
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R+G + + +T PE GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 249 LSGKHIP-PS-HALDLIR--DRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
++ +P P +++ +R +M +C E EL L +C +P ER
Sbjct: 198 VTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPE---------ELYDLMLQCWDKDPEER 248
Query: 304 P 304
P
Sbjct: 249 P 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 6e-11
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 21/249 (8%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V++G +N+ R+A+K + F +E +++ +LR+ L +L C G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
E M +L L E + A + + +A+ + Y + +++ DL A IL ED
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140
Query: 196 GNPRLSTFGLMKNSRDG--KSYSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLDLLSG 251
+++ FGL + ++ S + + T PE G + +S ++SFG LL ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 252 KHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+P D I +M C + E+ ++ C EP +RP+
Sbjct: 201 GQVPYPGMNNHEVYDQI-TAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPS 250
Query: 306 PKSLVTALS 314
K+L L
Sbjct: 251 FKALREELD 259
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 6e-11
Identities = 56/182 (30%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 129 DERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
+E+L LV EY P L HL + A R + ALEY S G +Y DL
Sbjct: 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERA-RFYAA-EIVLALEYLHSLG-IIYRDLKP 121
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL D DG+ +L+ FGL K S + TP PE L +S G
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPR 301
LL ++L+GK PP +A + + + + L+ F + E L S LQ +P
Sbjct: 182 LLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233
Query: 302 ER 303
+R
Sbjct: 234 KR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 7e-11
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 52/284 (18%)
Query: 67 EHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLT 119
E GE A VYKG+L + +A+K A P +Q F +EA + L++ +
Sbjct: 12 ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIV 71
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH--------------PMKWAMRLRVVL 165
LLG C + ++ EY+ + L + L H + + L + +
Sbjct: 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 166 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------- 218
+A +EY +S ++ DL A L E ++S FGL SRD YS +
Sbjct: 132 QIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SRDI--YSADYYRVQSK 185
Query: 219 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 269
+ + PPE + G+ T ES I+SFG +L ++ S P +++IR R L
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL 245
Query: 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
+ C + L C P RP K + T L
Sbjct: 246 PCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 7e-11
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 64 IVSEHGEKAPNVVYKGKLENQRR------IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN 116
+ E GE A V+ G+ + +AVK A D R+ F EA + ++
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHL------------FHWETHPMKWAMRLRVV 164
+ G C EGD ++V EYM + L K L + + L++
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+ +A + Y S+ ++ DL L D ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 219 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK 252
+ + PPE + + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 2e-10
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 36/273 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----AQAL 171
LLG +G L++ E M L +L E +P++ L+ ++ + A +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
EL+R+ C QY P+ RP+ +++++
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 4e-10
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 63 NIVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRN 115
++ E G+ + +VY+G K E + R+AVK N A R +FL EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL---- 167
+ + LLG +G L+V E M + L +L E +P + L+ ++ +
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 168 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAF 221
A + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 222 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCL 276
PE L+ G T S ++SFG +L ++ S P L + D D+C
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
E + L C Q+ P+ RP +V L
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 6e-10
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
EN++S + A YKGK ++N + VK N + + + +G+L++ +
Sbjct: 695 ENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD----MGKLQHPNIVK 747
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY--CTSKG 178
L+G C L+ EY+ + L++ L + W R ++ + +A+AL + C
Sbjct: 748 LIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAKALRFLHCRCSP 802
Query: 179 RALYHDLNAYRILFDEDGNPRL--STFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 236
+ +L+ +I+ D P L S GL+ D K + ++ A+ PE T +T +S
Sbjct: 803 AVVVGNLSPEKIIIDGKDEPHLRLSLPGLL--CTDTKCFISS-AYVAPETRETKDITEKS 859
Query: 237 VIYSFGTLLLDLLSGKHIPPSHA--------LDLIR----DRNLQMLTDSCLEGQFT--D 282
IY FG +L++LL+GK P+ A ++ R D +L M D + G +
Sbjct: 860 DIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ 917
Query: 283 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
++ E++ LA C +P RP ++ L + +
Sbjct: 918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955
|
Length = 968 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++A+K + P FL+EA+ + +LR+++L L E + +V
Sbjct: 22 VWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
E+M +L L + +K + + +A + Y + ++ DL A IL ++
Sbjct: 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGDN 138
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 249 LSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
++ +P L+ + +R +M C +G + EL++L C + +P ER
Sbjct: 197 VTKGRVPYPGMVNREVLEQV-ERGYRM---PCPQG--CPESLHELMKL---CWKKDPDER 247
Query: 304 P 304
P
Sbjct: 248 P 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-09
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V++G N +AVK + DP+ FL EA+ + +LR+ +L L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
E M +L ++L +K + + +A + Y ++ ++ DL A +L E+
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGEN 139
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R+G + + +T PE R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 249 LSGKHIP 255
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 1e-09
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + P FLEEA+ + +LR+++L L E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L E +K + + +A + Y + ++ DL + IL +
Sbjct: 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGDG 138
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 249 LSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
++ +P P + +R + + D L L +C + +P ERP
Sbjct: 197 VTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 2e-09
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 28/242 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 138
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 249 LSGKHIP-----PSHALDLIRDRNLQMLTDS-CLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P LD + +R +M C E L L +C + EP E
Sbjct: 197 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEE 246
Query: 303 RP 304
RP
Sbjct: 247 RP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 161 LRVVLHLAQALEYC----TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 216
R++ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 217 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
TP PE L +S I+S G L+ +L + PP A RN L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLA 219
Query: 273 DSCLEGQFTDDDG---TELVRLASRCLQYEPRERPNPKSL 309
EG+F +EL + L +P +RP+ + L
Sbjct: 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 48/284 (16%)
Query: 64 IVSEHGEKAPNVVYKGKLEN------QRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNN 116
++ E G+ + +VY+G + + R+A+K N + + +FL EA + + +
Sbjct: 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH 69
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 175
+ LLG G L+V E M L +L P L + ++
Sbjct: 70 HVVRLLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNPGLGPPTLQKFIQMAAE 127
Query: 176 -SKGRALYH-------DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------- 218
+ G A DL A + ED ++ FG+ +RD Y T+
Sbjct: 128 IADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYRKGGKGL 182
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP---PSH--ALDLIRDRNLQML 271
+ + PE L+ G T +S ++SFG +L ++ + P S+ L + D L
Sbjct: 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL 242
Query: 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 315
++C + +L+ L C QY P+ RP +V++L
Sbjct: 243 PENCPD---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 3e-09
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 19/252 (7%)
Query: 69 GEKAPNVVYKGKLENQRRI-AVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 125
G+ + VV+K + +R+ A+K+ + +M + + ++EAR + +L ++ +
Sbjct: 9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V EY N L K L P+ R + + L + SK + L+ D+
Sbjct: 69 LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127
Query: 186 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSF 241
+ + D N ++ G+ K D +++ + TP PE +S +++
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG---TELVRLASRCLQY 298
G +L + +GKH P A N L + G F +L +L +CL
Sbjct: 188 GVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239
Query: 299 EPRERPNPKSLV 310
+ R+RP+ L+
Sbjct: 240 DYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 7e-09
Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 69 GEKAPNVVYKGKLE----NQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
GE V +G+L +Q ++AVK + + + + +FL EA + + + L+
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 123 GCCCEGDER------LLVAEYMPNETLAKHLFH--WETHPMKWA--MRLRVVLHLAQALE 172
G C E +++ +M + L L + P K L+ ++ +A +E
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 173 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EY 226
Y +++ ++ DL A + ED ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 227 LRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFT 281
L T +S +++FG + ++ + P D +R N + CL+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242
Query: 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
EL L C + +P++RP L L +
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 8e-09
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 34/261 (13%)
Query: 75 VVYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
VY G L + ++I AVK NR+ + QFL+E + + + +LLG C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 130 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
L+V YM + L ++ ETH + L +A+ +EY SK + ++ DL A
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYS 240
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187
Query: 241 FGTLLLDLLSGKHIPPSHALD-------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293
FG LL +L++ + PP +D L++ R L L+ ++ D L +
Sbjct: 188 FGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRL-------LQPEYCPD---PLYEVML 236
Query: 294 RCLQYEPRERPNPKSLVTALS 314
C +P RP LV+ +
Sbjct: 237 SCWHPKPEMRPTFSELVSRIE 257
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 66/279 (23%), Positives = 103/279 (36%), Gaps = 53/279 (18%)
Query: 63 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTN 120
++ G A VVY L N ++A+KR + + +E +++ Q + +
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV--------VLH-LAQAL 171
GDE LV Y+ +L MK + VL + + L
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLL--------DIMKSSYPRGGLDEAIIATVLKEVLKGL 115
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG----LMKNSRDGKSYSTNLAFTP---- 223
EY S G+ ++ D+ A IL EDG+ +++ FG L + TP
Sbjct: 116 EYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA 174
Query: 224 PEYLRTGRVTPESV-IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLT----DS 274
PE + I+SFG ++L +G PP L MLT
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL---------MLTLQNDPP 225
Query: 275 CLEGQFTDDD----GTELVRLASRCLQYEPRERPNPKSL 309
LE T D ++ S CLQ +P +RP + L
Sbjct: 226 SLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 42/263 (15%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 146
+AVK + + F EA + L++ + G C EGD ++V EYM + L K
Sbjct: 38 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 97
Query: 147 L--------FHWETHP---MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
L E + + + L + +A + Y S+ ++ DL L E+
Sbjct: 98 LRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGEN 156
Query: 196 GNPRLSTFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSFGTL 244
++ FG+ SRD YST+ + + PPE + + T ES ++S G +
Sbjct: 157 LLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 211
Query: 245 LLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
L ++ + GK + + ++ I + +C + E+ L C Q E
Sbjct: 212 LWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLGCWQRE 262
Query: 300 PRERPNPKSLVTALSPLQKETEV 322
P R N K + + L L K + V
Sbjct: 263 PHMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 27/246 (10%)
Query: 76 VYKGKLENQ-RRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDE 130
VY ++ +AVK + + + E R + L++ + G E +
Sbjct: 16 VYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT 75
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA----QALEYCTSKGRALYH-DL 185
+ EY+ +L+ L + V+ + L Y S G H D+
Sbjct: 76 LNIFLEYVSGGSLSSLL------KKFGKLPEPVIRKYTRQILEGLAYLHSNGIV--HRDI 127
Query: 186 NAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIY 239
IL D DG +L+ FG K + + ++ TP PE +R + I+
Sbjct: 128 KGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIW 187
Query: 240 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
S G ++++ +GK P S + + L + S + + E +CL+ +
Sbjct: 188 SLGCTVIEMATGKP-PWSELGNPM--AALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRD 244
Query: 300 PRERPN 305
P++RP
Sbjct: 245 PKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
F E A + QL + L L G C DE ++V EY+ L L H E + + +L
Sbjct: 48 FFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLHWKLD 105
Query: 163 VVLHLAQALEYCTSK--------GRALY---HDLNAYRILFDEDGNPRLSTFGLMKNSRD 211
V LA AL Y K G+ + + LN + F + +P + L + R
Sbjct: 106 VAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERV 165
Query: 212 GKSYSTNLAFTPPEYLRTGRVTPESV--IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269
+ + PE +R G+ + +SFGT LL++ S P S L +
Sbjct: 166 ERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLS---TLSSSEKER 217
Query: 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
D + D EL L ++C Y+P +RP+ ++++ L+
Sbjct: 218 FYQDQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G N ++AVK + + FLEEA + L++++L L + + ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L E + + +A+ + Y K ++ DL A +L E
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 139
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 249 LSGKHIP 255
++ IP
Sbjct: 198 VTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 4e-08
Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 48/284 (16%)
Query: 65 VSEHGEKAPNVVYKGKL-----ENQRRIAVKRF----NRMAWPDPRQFLEEARSVGQLRN 115
+ E GE A +YKG L ++ + +A+K N W + F +EA + +L +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66
Query: 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP-----------MKWAMR---- 160
+ LLG + ++ EY+ L + L H +K ++
Sbjct: 67 PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 218
L + + +A +EY +S ++ DL A IL E + ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 219 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 269
+ + PPE + G+ + +S I+SFG +L ++ S P ++++R R L
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
++ C ++ L + C Q P RP K + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 28/264 (10%)
Query: 67 EHGEKAPNVVYKGKLENQRR----IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNL 121
E GE V +G+L+ + +A+K + R FL EA +GQ + + L
Sbjct: 16 EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 181
G + +++ EYM N +L K L + + ++ +A ++Y + +
Sbjct: 71 EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLSEMN-YV 128
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTN-----LAFTPPEYLRTGRVTPE 235
+ DL A IL + + ++S FGL + D ++ Y+T + +T PE + + T
Sbjct: 129 HRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSA 188
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG---QFTDDDGTELVRLA 292
S ++SFG ++ +++S P D + Q + + +G D + L +L
Sbjct: 189 SDVWSFGIVMWEVMSYGERP-------YWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLM 241
Query: 293 SRCLQYEPRERPNPKSLVTALSPL 316
C Q + ERP +V+ L +
Sbjct: 242 LDCWQKDRNERPTFSQIVSTLDKM 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 5e-08
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA ++GQ ++ + L G G+ ++V EYM N L L E + A +
Sbjct: 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108
Query: 161 LRVVLH-LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN- 218
L +L LA ++Y + G ++ L A+++L + D ++S F ++ + Y+T
Sbjct: 109 LMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMS 167
Query: 219 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
+ + PE ++ + S ++SFG ++ +++S
Sbjct: 168 GKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 53.6 bits (128), Expect = 8e-08
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Query: 85 RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144
+ +A+K+ N P + E + +L+N + N L GDE +V EY+ +L
Sbjct: 45 QEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT 104
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+ + A R L QALE+ + + ++ D+ + +L DG+ +L+ FG
Sbjct: 105 DVVTETCMDEAQIAAVCRECL---QALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFG 160
Query: 205 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 260
+S + + TP PE + P+ I+S G + ++++ G+ PP
Sbjct: 161 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNE 218
Query: 261 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
+ +R L + T+ E Q + +RCL+ + +R + K L+
Sbjct: 219 NPLRALYL-IATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 1e-07
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQ 447
K G+ F+ D +AIE Y + ++ + Y +L YL + ++AL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 448 IISP 451
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDER------LLVAEYMPNETLAKHLFHWETHP-- 154
FL EA + + + + L+G C + E +++ +M + L L +
Sbjct: 47 FLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCP 106
Query: 155 --MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212
+ M ++ + +A +EY +SK ++ DL A + +E+ N ++ FGL K +G
Sbjct: 107 QYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNG 165
Query: 213 KSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALD 261
Y P E L T +S ++SFG + ++ + P S D
Sbjct: 166 DYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225
Query: 262 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+R N CL+G L L S C P++RP+ ++L
Sbjct: 226 YLRQGNRLKQPPDCLDG---------LYSLMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 2e-07
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 262 GSAKELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 13/236 (5%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 146
+AVK +FL+EA + ++++ L LLG C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 147 LFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206
L + + L + ++ A+EY K ++ DL A L E+ +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLS 151
Query: 207 KNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 260
+ G +Y+ + + +T PE L + + +S +++FG LL ++ + + P +
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 209
Query: 261 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
DL + L + + + ++ L C Q+ P +RP+ + A +
Sbjct: 210 DL---SQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 3e-07
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+K+ N P + E + + +N + N L
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QAL++ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSN-QVIHRDIKS 143
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + R
Sbjct: 204 MAIEMVEGE--PPYLNENPLRALYL-IATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR 260
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 261 GSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 4e-07
Identities = 52/264 (19%), Positives = 103/264 (39%), Gaps = 44/264 (16%)
Query: 87 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL-- 143
+AVK A + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 144 --------------------AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183
+ +L + + + + +++ ++Y ++ + ++
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQY-LAEMKLVHR 151
Query: 184 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV 237
DL A +L E ++S FGL ++ + SY + + E L T +S
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211
Query: 238 IYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
++SFG LL ++++ G + I P +L++ ++C E E+ L
Sbjct: 212 VWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNLM 262
Query: 293 SRCLQYEPRERPNPKSLVTALSPL 316
C + EP +RP + L +
Sbjct: 263 LTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 5e-07
Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 45/266 (16%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 146
+AVK + F EA + L++ + G C +GD ++V EYM + L K
Sbjct: 38 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 97
Query: 147 LFHWETHPM----------KWAMRLRVVLH----LAQALEYCTSKGRALYHDLNAYRILF 192
L M K + L +LH +A + Y S+ ++ DL L
Sbjct: 98 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLV 156
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSF 241
G L G SRD YST+ + + PPE + + T ES ++SF
Sbjct: 157 ---GANLLVKIGDFGMSRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211
Query: 242 GTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296
G +L ++ + GK + + ++ I + C + E+ + C
Sbjct: 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDIMLGCW 262
Query: 297 QYEPRERPNPKSLVTALSPLQKETEV 322
Q EP++R N K + L L K T +
Sbjct: 263 QREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 5e-07
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
FL EA + L++++L L + + ++ E+M +L L E +
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSY 215
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165
Query: 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM- 270
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 223
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
++C E EL + RC + P ERP + + + L
Sbjct: 224 RPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 108 RSVGQLRNNRLTNLL---GCCCEGDER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
+ + LRN N++ G C E L+ E++P+ +L ++L + + +L+
Sbjct: 55 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK-INLKQQLK 113
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST----- 217
+ + + ++Y S+ + ++ DL A +L + + ++ FGL K K Y T
Sbjct: 114 YAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172
Query: 218 --NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM-- 270
+ + PE L + S ++SFG L +LL+ + P + L +I + QM
Sbjct: 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTV 232
Query: 271 --LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
L EG+ + E+ +L +C +++P +R ++L+
Sbjct: 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 7e-07
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
G++ ++ D +A+E Y + ++ + Y + Y ++AL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 486
+ P A Y A +G EA A ++ L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 7e-07
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L M ++
Sbjct: 68 MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY S+ + ++ DL A +L ED +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSH 258
+ Y +TN + + PE L T +S ++SFG LL ++ + IP
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318
L+++ + +C EL + C P +RP K LV L +
Sbjct: 245 LFKLLKEGHRMDKPANCTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295
Query: 319 ETEVPSHVLMGIPHSASVSPLSP 341
T ++ + +P SP P
Sbjct: 296 VTSTDEYLDLSVPFE-QYSPGCP 317
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 26/242 (10%)
Query: 87 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+AVK D FL EA + + + + L+G E R ++ E M L
Sbjct: 39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98
Query: 146 HLFHWE---THPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR- 199
L P M+ L +A+ +Y ++ D+ A L G R
Sbjct: 99 FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRV 157
Query: 200 --LSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 251
++ FG+ ++ Y + + PPE G T ++ ++SFG LL ++ S
Sbjct: 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL 217
Query: 252 KHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKS 308
++P P N +++ G+ G + R+ + C Q+ P +RPN +
Sbjct: 218 GYMPYPGR-------TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFAT 270
Query: 309 LV 310
++
Sbjct: 271 IL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 27/259 (10%)
Query: 76 VYKG---KLENQR-RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY+G EN++ +AVK P R+ FL+EA + Q + + L+G E +
Sbjct: 22 VYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
+V E P L +L + + A + L+ AL Y SK R ++ D+ A +
Sbjct: 81 VWIVMELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNV 138
Query: 191 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSFGTLL 245
L +L FGL + D Y + P PE + R T S ++ FG +
Sbjct: 139 LVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 198
Query: 246 LDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
++L G + + + I + + +C L L ++C Y+P
Sbjct: 199 WEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDP 249
Query: 301 RERPNPKSLVTALSPLQKE 319
+RP L LS + +E
Sbjct: 250 SKRPRFTELKAQLSDILQE 268
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 1e-06
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 19/243 (7%)
Query: 76 VYKGKLENQRR--IAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 132
VYKG ++N+ + +A+K + D + +++ +V Q + +T G +G +
Sbjct: 20 VYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW 78
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
++ EY+ + L + P++ ++ + + L+Y S+ R ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLL 134
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 248
E G+ +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194
Query: 249 LSGKHIPPSHALDLIRDRNL-QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307
G+ PP+ L +R L + LEGQ++ CL +PR RP K
Sbjct: 195 AKGE--PPNSDLHPMRVLFLIPKNSPPTLEGQYS----KPFKEFVEACLNKDPRFRPTAK 248
Query: 308 SLV 310
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 51/257 (19%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+AVK A + R FL+E + + +L++ + LLG C + D ++ EYM N L +
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 146 HLFH--------------WETHPM---KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
L H + ++ L V L +A ++Y +S ++ DL
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFG 242
L E+ +++ FG+ +N G Y P E + G+ T S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227
Query: 243 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGTE------------ 287
L ++L L +++ LTD + G+F D G +
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276
Query: 288 LVRLASRCLQYEPRERP 304
L L +C + RERP
Sbjct: 277 LYELMLQCWSRDCRERP 293
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 31/250 (12%)
Query: 75 VVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARS----VGQLRNNRLTNLLGCCCEGD 129
VVYKG LE +A+K+ + + L+ + L++ + +G D
Sbjct: 15 VVYKGLNLETGDFVAIKQISLEK--IKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD 72
Query: 130 ERLLVAEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
++ EY N +L + + + P A+ + VL Q L Y +G ++ D+ A
Sbjct: 73 SLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVL---QGLAYLHEQG-VIHRDIKAA 128
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
IL +DG +L+ FG+ D ++ TP PE + + S I+S G
Sbjct: 129 NILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCT 188
Query: 245 LLDLLSGKHIPPSHALDLIRDRN-----LQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
+++LL+G PP + D N +++ D + EL +C Q +
Sbjct: 189 VIELLTGN--PPYY------DLNPMAALFRIVQDDHPP--LPEGISPELKDFLMQCFQKD 238
Query: 300 PRERPNPKSL 309
P RP K L
Sbjct: 239 PNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 69 GEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 125
GE VVYK + +A+K+ + P+ L E + + +L + + LL
Sbjct: 8 GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF 67
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWET----HPMKWAMRLRVVLHLAQALEYCTSKGRAL 181
+ LV E+M + L K + + +K + L Q L +C S G L
Sbjct: 68 RHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYL-----YQLLQGLAFCHSHG-IL 120
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMKNSR-DGKSYSTNLA---FTPPEYLRTGRVTPESV 237
+ DL +L + +G +L+ FGL ++ + Y+ + + PE L + V
Sbjct: 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPV 180
Query: 238 -IYSFGTLLLDLLSGKHIPP 256
I+S G + +LLS + + P
Sbjct: 181 DIWSVGCIFAELLSRRPLFP 200
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 2e-06
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 32/228 (14%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH-PMKWAMRL 161
F E A + Q+ + L + G C G E ++V E++ + L L + P+ W ++
Sbjct: 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 217
V LA AL Y K L H ++ A IL G T +K S G S++
Sbjct: 121 TVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLAE-GTSPFIKLSDPGVSFTALSR 177
Query: 218 -----NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDR 266
+ + PE + G ++ + +SFGT LL++ +P PS + ++
Sbjct: 178 EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-ERFYEK 236
Query: 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
++ SC EL L S+CL YEP +RP+ ++++ L+
Sbjct: 237 KHRLPEPSC----------KELATLISQCLTYEPTQRPSFRTILRDLT 274
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 56/260 (21%), Positives = 97/260 (37%), Gaps = 43/260 (16%)
Query: 76 VYKGKL-------ENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCE 127
VY+G R+AVK + A + +FL+EA + + + LLG C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-----SKGRALY 182
+ + ++ E M L +L + L + L L+ + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLDVAKGCVYLEQMHFIH 129
Query: 183 HDLNAYRILFDEDGNPR-----LSTFGLMKNSRDGKSYST------NLAFTPPEYLRTGR 231
DL A L E G + FGL ++ Y + + PE L G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 232 VTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQF------TDDD 284
T +S ++SFG L+ ++L+ P P+ N ++L G+ D
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDK- 241
Query: 285 GTELVRLASRCLQYEPRERP 304
+ +L + C +P ERP
Sbjct: 242 ---IYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 16/224 (7%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-------HWETHPM 155
F E +L + + LLG C E + ++ EY L + L + P+
Sbjct: 55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114
Query: 156 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 215
++ + +A +++ S R ++ DL A L ++S L K+ + + Y
Sbjct: 115 STKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173
Query: 216 STN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 270
L + PE ++ + +S ++SFG L+ ++ + +P L + L
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L LE + + L +L +RC P++RP+ LV+AL
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 3e-06
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 20/212 (9%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAMRL 161
F E A + Q+ + + L G C E ++V E++ L LF H ++ + +
Sbjct: 51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPL--DLFMHRKSDVLTTPWKF 108
Query: 162 RVVLHLAQALEYCTSK----GRALYHDLNAYRILFDEDGNP--RLSTFGLMKNSRDGKSY 215
+V LA AL Y K G ++ R D + P +LS G+ +
Sbjct: 109 KVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQEC 168
Query: 216 STNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 274
+ + PE + + + + +SFGT L ++ IP ++D+ L +
Sbjct: 169 VERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIP-------LKDKTLAE-KER 220
Query: 275 CLEGQF--TDDDGTELVRLASRCLQYEPRERP 304
EGQ EL L + C+ Y+P +RP
Sbjct: 221 FYEGQCMLVTPSCKELADLMTHCMNYDPNQRP 252
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 4e-06
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + +AL ++G ++ D+ +
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLKALSVLHAQG-VIHRDIKS 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG +L TP PE + PE I+S G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 244 LLLDLLSGK----HIPPSHALDLIRD 265
++++++ G+ + PP A+ +IRD
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIRD 230
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL---------FHWET-- 152
+E + +G+ +N + NLLG C + ++ EY L ++L + ++
Sbjct: 71 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128
Query: 153 ---HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
M + + +A+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDV 187
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P RP K LV L
Sbjct: 248 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 222
++ + LEY S + ++ D+ A IL +E+G +L+ FG+ D + + T
Sbjct: 104 ILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGT 162
Query: 223 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 274
P PE ++ ++ I+S G +++ GK I P A+ +I ++ L+D
Sbjct: 163 PFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP 222
Query: 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ E +CL +P ERP+ L
Sbjct: 223 -------EKWSPEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 9e-06
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 47/267 (17%)
Query: 71 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGD 129
+AP ++ E +AVK A D + F EA + + + + LLG C G
Sbjct: 25 RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81
Query: 130 ERLLVAEYMPNETLAKHLFHWETH--------------------PMKWAMRLRVVLHLAQ 169
L+ EYM L + L H P+ +L + +A
Sbjct: 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141
Query: 170 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTP 223
+ Y S+ + ++ DL L E+ +++ FGL +N Y + + + P
Sbjct: 142 GMAY-LSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMP 200
Query: 224 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNLQMLTDSCLE 277
PE + R T ES ++++G +L ++ S + P + + +RD N+ D+C
Sbjct: 201 PESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC-- 257
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERP 304
EL L C P +RP
Sbjct: 258 -------PLELYNLMRLCWSKLPSDRP 277
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+ +A + Y SK R ++ DL A IL D ++ FGLM+ + +
Sbjct: 104 VQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV 162
Query: 219 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNLQMLT 272
A+ PE LRT + S ++ FG L ++ + + S L I D+ + L
Sbjct: 163 PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGERLE 221
Query: 273 --DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
++C + ++ + +C + P +RP +L L
Sbjct: 222 RPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 12/248 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+K+ N P + E + + ++ + N L
Sbjct: 28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QALE+ S ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 143
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + +R
Sbjct: 204 MAIEMVEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 260
Query: 304 PNPKSLVT 311
+ K L+
Sbjct: 261 GSAKELLQ 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 76 VYKGK-LENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER- 131
VYK + + +A+K+ P + E + + +LR+ + L +
Sbjct: 15 VYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74
Query: 132 -LLVAEYMPNE---TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
+V EYM ++ L + +K M+ L + L+Y S G L+ D+
Sbjct: 75 IYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSNG-ILHRDIKG 128
Query: 188 YRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFT----PPEYLRTG--RVTPESVIY 239
IL + DG +L+ FGL + R+ Y TN T PPE L G R PE ++
Sbjct: 129 SNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMW 186
Query: 240 SFGTLLLDLLSGKHIPP----SHALDLI 263
S G +L +L GK I L+ I
Sbjct: 187 SVGCILAELFLGKPIFQGSTELEQLEKI 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A VL +AL + ++G ++ D+ +
Sbjct: 88 GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVL---KALSFLHAQG-VIHRDIKS 143
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 144 DSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 203
Query: 244 LLLDLLSGK----HIPPSHALDLIRD------RNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++++++ G+ + PP A+ IRD +NL ++ L
Sbjct: 204 MVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVS-------------PRLRSFLD 250
Query: 294 RCLQYEPRERPNPKSLV 310
R L +P +R L+
Sbjct: 251 RMLVRDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 67 EHGEKAPNVVYKGKLENQRR----IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNL 121
E GE V++G L+ R +A+K RQ FL EA +GQ ++ + L
Sbjct: 17 EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
G + +++ EYM N L K+L E + LR +A ++Y S
Sbjct: 72 EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTN-----LAFTPPEYLRTGRV 232
++ DL A IL + + ++S FGL + D +Y+T+ + +T PE + +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187
Query: 233 TPESVIYSFGTLLLDLLS 250
T S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L M++
Sbjct: 74 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIPPSHALD 261
Y +TN + + PE L T +S ++SFG LL ++ L G P +
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250
Query: 262 LIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTAL 313
L + +L EG D EL + C P +RP K LV L
Sbjct: 251 LFK-----LLK----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS--TNLAFT 222
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 107 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 165
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
PE + T + +SFG L+ ++L+G +P
Sbjct: 166 APEVVNRRGHTQSADWWSFGVLMFEMLTG-SLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 118 LTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCT 175
LT+L C + E L V EY+ L +FH ++ H + L++
Sbjct: 58 LTHLY-CTFQTKENLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAEIICGLQFLH 113
Query: 176 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR 231
SKG +Y DL IL D DG+ +++ FG+ K + G + + TP PE L +
Sbjct: 114 SKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQK 172
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALD 261
+SFG LL ++L G+ P H D
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 44/250 (17%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+AVK R FL+E + + +L+N + LLG C D ++ EYM N L +
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 146 HLFHWETHP----------MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
L E + A L + + +A ++Y S ++ DL L
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165
Query: 196 GNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLLLDLL 249
+++ FG+ +N G Y P E + G+ T S +++FG L ++
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGTE------------LVRLASR 294
+ L +++ +L+D + G+F + G + + +L R
Sbjct: 226 T-----------LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274
Query: 295 CLQYEPRERP 304
C + ++RP
Sbjct: 275 CWSRDIKDRP 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 35/225 (15%)
Query: 114 RNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--------------FHWETHPMKWAM 159
++ + NLLG C + ++ EY L + L + +
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--ST 217
+ +A+ +EY S+ R ++ DL A +L ED +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 218 N----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNL 268
N + + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
+C EL L C P +RP K LV AL
Sbjct: 255 MDKPSNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 71 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
KA +Y K +++R+ ++ +MA + ++ LE+ S R L E +
Sbjct: 15 KATGKMYACKKLDKKRLKKRKGEQMALNE-KKILEKVSS-------RFIVSLAYAFETKD 66
Query: 131 RL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLN 186
L LV M L H+++ A R + + AQ LE+ + R +Y DL
Sbjct: 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEA---RAIFYAAQIICGLEHLHQR-RIVYRDLK 122
Query: 187 AYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 243
+L D+ GN R+S GL +K + K + + PE L+ ++ G
Sbjct: 123 PENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGC 182
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
L ++++G P + + L+ T + ++ D E L LQ +P +R
Sbjct: 183 TLYEMIAG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 24/253 (9%)
Query: 79 GKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138
G L N R + F+ P+Q V Q R +R G +L + +
Sbjct: 97 GNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIE------AGQASVLFSRFQ 150
Query: 139 PNETLAKHLFH-----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
P+ + + + W++ P+ + +A+ +E+ S+ + ++ DL A IL
Sbjct: 151 PSTSGSTNPPQETDDLWKS-PLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLS 208
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
E+ ++ FGL ++ Y L + PE + T +S ++SFG LL +
Sbjct: 209 ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWE 268
Query: 248 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 306
+ S G P ++ + Q L D + ++ E+ R+ C Q +P+ERP
Sbjct: 269 IFSLGASPYPGVQIN---EEFCQRLKDGT-RMRAPENATPEIYRIMLACWQGDPKERPTF 324
Query: 307 KSLVTALSPLQKE 319
+LV L L +E
Sbjct: 325 SALVEILGDLLQE 337
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VY K + +AVK + ++FL EA + QL + + L+G C +G+ +LV
Sbjct: 15 VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-KGEPLMLV 73
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRILFD 193
E P L K+L + L+ + H +A + Y SK ++ DL A +L
Sbjct: 74 MELAPLGPLLKYL---KKRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLV 129
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLL 246
++S FG+ + G Y L + PE + G+ + +S ++S+G L
Sbjct: 130 NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLW 189
Query: 247 DLLS 250
+ S
Sbjct: 190 EAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM--------------PNETLAKHLFH 149
+E + +G+ +N + NLLG C + +V EY P E +
Sbjct: 66 MEMMKMIGKHKN--IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 150 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ + +A+ +E+ SK + ++ DL A +L ED +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIP--PSHA 259
Y +TN + + PE L T +S ++SFG LL ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 260 L-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L L+++ +C + EL L C P +RP K LV L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 112 QLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQAL 171
+L++ + LG + D + EY+P ++A L ++ + V + + L
Sbjct: 62 ELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEE--TLVRNFVRQILKGL 119
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK------SYSTNLAF 221
Y ++G ++ D+ IL D G ++S FG+ K NS K S ++ +
Sbjct: 120 NYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178
Query: 222 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 253
PE ++ T ++ I+S G L++++L+GKH
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 58/286 (20%)
Query: 67 EHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
E GE A V+ + N + +AVK + + F EA + L++ +
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETH----------------PMKWAMRLRVV 164
G C EG L+V EYM + L + L +H + L +
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFL---RSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A + Y S ++ DL L + ++ FG+ SRD YST+
Sbjct: 129 SQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGG 182
Query: 219 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLI-RDRN 267
+ + PPE + + T ES I+SFG +L ++ + GK + + A++ I + R
Sbjct: 183 RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE 242
Query: 268 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+ +C E+ + C Q EP++R K + + L
Sbjct: 243 LER-PRTC---------PPEVYAIMQGCWQREPQQRMVIKDIHSRL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLR 162
+ E R + RN+ L CC + +RL V E++ L +FH + R R
Sbjct: 43 MTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARAR 99
Query: 163 V-VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA 220
+ AL + KG +Y DL +L D +G+ +L+ FG+ K +GK+ ST
Sbjct: 100 FYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST-FC 157
Query: 221 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
TP PE L+ P ++ G LL ++L G H P
Sbjct: 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 42/281 (14%)
Query: 65 VSEHGEKAPNVVYKGKL------ENQRRIAVKRF-NRMAWPDPRQFLEEARSVGQLRNNR 117
+ E GE VYKG L E + +A+K ++ P +F EA +L++
Sbjct: 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN 69
Query: 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP----------MKWAMR----LRV 163
+ LLG + ++ Y + L + L H +K + + +
Sbjct: 70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST------ 217
V +A +E+ +S ++ DL +L + N ++S GL + Y
Sbjct: 130 VTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLL 188
Query: 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT 272
+ + PE + G+ + +S I+S+G +L ++ S P +++IR+R +
Sbjct: 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248
Query: 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
D C +T L C P RP K + + L
Sbjct: 249 DDCPAWVYT---------LMLECWNEFPSRRPRFKDIHSRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 28/246 (11%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R LV EY+P +L
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
+L + H + R +++L+ +Q +EY SK R ++ DL IL + + ++
Sbjct: 96 DYL---QKHRERLDHR-KLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIG 150
Query: 202 TFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 254
FGL K K Y + + PE L + + S ++SFG +L +L +
Sbjct: 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK 210
Query: 255 ---PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRER 303
PP+ + ++ D+ QM+ +E G+ G E+ + C +P +R
Sbjct: 211 SCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQR 270
Query: 304 PNPKSL 309
P+ L
Sbjct: 271 PSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 4e-05
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 28/156 (17%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF----- 221
L AL+Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 222 -TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
TP PE + +S I+S G +L +L + KH P NL L L
Sbjct: 165 GTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH--PFEG------ENLLELALKIL 216
Query: 277 EGQFTDDD---GTELVRLASRCLQYEPRERPNPKSL 309
+GQ+ +EL L S LQ +P ERP+ +
Sbjct: 217 KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
L+ +Y+ L HL+ E H + +R+ + + AL+ + +Y D+ IL
Sbjct: 82 LILDYVNGGELFTHLYQRE-HFTESEVRV-YIAEIVLALD-HLHQLGIIYRDIKLENILL 138
Query: 193 DEDGNPRLSTFGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVTPESVI--YSFGTLL 245
D +G+ L+ FGL K S+ + + PE +R G + + +S G L
Sbjct: 139 DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198
Query: 246 LDLLSG 251
+LL+G
Sbjct: 199 FELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 76 VYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 132
V+KG ++N Q+ +A+K + D + +++ +V Q + +T G + +
Sbjct: 20 VFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 78
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
++ EY+ + L E P+ ++ + + L+Y S+ + ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLL 134
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 248
E G +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 194
Query: 249 LSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
G+ + P L LI N LEG ++ L CL EP RP
Sbjct: 195 AKGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYS----KPLKEFVEACLNKEPSFRP 245
Query: 305 NPKSLV 310
K L+
Sbjct: 246 TAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 226
L++ SKG +Y DL ++ D DG+ +++ FG+ K + G + ++ TP PE
Sbjct: 109 LQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEI 167
Query: 227 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 261
L+ + T +SFG LL ++L G+ P H D
Sbjct: 168 LQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET----LAKHLFHWETHPMK 156
R FL EA +GQ + + +L G + ++V EYM N + L KH + +
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 157 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 214
+R +A ++Y + G ++ DL A IL + + ++S FGL + D +
Sbjct: 110 GMLR-----GIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163
Query: 215 YSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
Y+T + +T PE + + T S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 6e-05
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + +AL Y ++G ++ D+ +
Sbjct: 91 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKS 146
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 147 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 206
Query: 244 LLLDLLSGK----HIPPSHALDLIRD 265
++++++ G+ + PP A+ IRD
Sbjct: 207 MVIEMIDGEPPYFNEPPLQAMRRIRD 232
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 6e-05
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 159 MRLRVVLHLAQA----LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRD 211
+ + ++ +A A L Y + R ++ D+ IL + G +L FG+ + NS
Sbjct: 100 IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159
Query: 212 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK------------HIPPSHA 259
T+ + PE ++ G+ T +S ++S G +++L GK P
Sbjct: 160 DTFVGTS-TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGI 218
Query: 260 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
LDL++ + +Q F +D L CL +P ERP P+ L
Sbjct: 219 LDLLQ-QIVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 43/200 (21%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYR 189
LV EY+P LA L + + A +++A+ ALEY S G ++ DL
Sbjct: 70 LVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG-IIHRDLKPDN 123
Query: 190 ILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVI---- 238
IL D +G+ +L+ FGL K + + P+Y+ PE ++
Sbjct: 124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI-----APEVILGQGH 178
Query: 239 ------YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--QFTDDDGT--EL 288
+S G +L + L G IPP H + + + L G ++ +D E
Sbjct: 179 SKTVDWWSLGCILYEFLVG--IPPFH------GETPEEIFQNILNGKIEWPEDVEVSDEA 230
Query: 289 VRLASRCLQYEPRERPNPKS 308
+ L S+ L +P +R KS
Sbjct: 231 IDLISKLLVPDPEKRLGAKS 250
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 162 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 218
R + AQ LE+ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 219 LAFTP----PEYLRTGRVTPESVIY-SFGTLLLDLLSGK 252
A TP PE L+ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 32/246 (13%)
Query: 86 RIAVKRFNRMAWPDPRQFL-EEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETL 143
++AVK A R+ L E + + L N+ + NLLG C G L++ EY L
Sbjct: 67 KVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDL 126
Query: 144 AKHLFHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199
L + + L +L +A+ + + SK ++ DL A +L +
Sbjct: 127 LNFL-RRKRESF---LTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVK 181
Query: 200 LSTFGLMKNSRDGKSY-STNLAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLS-GK 252
+ FGL ++ + +Y A P PE + T ES ++S+G LL ++ S G
Sbjct: 182 ICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS 241
Query: 253 HIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307
+ P +D LI++ +M + + + ++++ C +P +RP K
Sbjct: 242 NPYPGMPVDSKFYKLIKE-GYRMA-----QPEHAPAEIYDIMK---TCWDADPLKRPTFK 292
Query: 308 SLVTAL 313
+V +
Sbjct: 293 QIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--FHWETHPMKWA 158
+Q +E + +L++ + LG E D + E +P +LAK L + P+
Sbjct: 47 KQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVI-R 105
Query: 159 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS---RDGKSY 215
+ R +L LEY + ++ D+ IL D +G +L+ FG+ K KS+
Sbjct: 106 LYTRQIL---LGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSF 161
Query: 216 STNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------RDRN 267
+ + PE + + G + I+S G +L++ +GK PP L+ + R +
Sbjct: 162 KGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKE 219
Query: 268 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
L + D D+ + + CLQ +P RP L
Sbjct: 220 LPPIPDH------LSDEAKDFILK---CLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 69 GEKAPNVVYKGKLENQ--RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC 126
GE A VYK + + +A+K+ R+ + + E + ++ + +
Sbjct: 28 GEGASGEVYKAT-DRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNIVDYYDSYL 85
Query: 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 186
GDE +V EYM +L + M V + Q LEY S+ ++ D+
Sbjct: 86 VGDELWVVMEYMDGGSLTDIITQNFV-RMNEPQIAYVCREVLQGLEYLHSQNV-IHRDIK 143
Query: 187 AYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFG 242
+ IL +DG+ +L+ FG KS ++ TP PE ++ P+ I+S G
Sbjct: 144 SDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLG 203
Query: 243 TLLLDLLSGK--HI--PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298
+ +++ G+ ++ PP AL LI + + L + + E ++CL
Sbjct: 204 IMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP-------EKWSPEFKDFLNKCLVK 256
Query: 299 EPRERPNPKSLVT 311
+P +RP+ + L+
Sbjct: 257 DPEKRPSAEELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 71 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
K+ VY KL + +F + D F EE R + N+ L C + D+
Sbjct: 65 KSSQKVYAMKL-------LSKFEMIKRSDSAFFWEE-RDIMAFANSPWVVQLFCAFQDDK 116
Query: 131 RL-LVAEYMPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNA 187
L +V EYMP L + +++ P KWA VVL AL+ S G ++ D+
Sbjct: 117 YLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVL----ALDAIHSMG-LIHRDVKP 170
Query: 188 YRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVI 238
+L D+ G+ +L+ FG MK G TP PE L++ G E
Sbjct: 171 DNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 230
Query: 239 YSFGTLLLDLLSG 251
+S G L ++L G
Sbjct: 231 WSVGVFLFEMLVG 243
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 128 GDERLLVAEYMPN---ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 184
D LV EY+ +L K L P WA + + + +E +G ++ D
Sbjct: 69 KDYLYLVMEYLNGGDCASLIKTLGGL---PEDWAKQY--IAEVVLGVEDLHQRG-IIHRD 122
Query: 185 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 244
+ +L D+ G+ +L+ FGL +N + K + + PE + S +S G +
Sbjct: 123 IKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCV 182
Query: 245 LLDLLSGKHIPPSHA 259
+ + L G PP HA
Sbjct: 183 IFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 19/243 (7%)
Query: 76 VYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 132
V+KG ++N Q+ +A+K + D + +++ +V Q + +T G +G +
Sbjct: 20 VFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLW 78
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
++ EY+ + L + A L+ +L + L+Y S+ + ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSE-KKIHRDIKAANVLL 134
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 248
E G+ +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 194
Query: 249 LSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307
G+ PP+ + +R + L G+F+ CL +P RP K
Sbjct: 195 AKGE--PPNSDMHPMRVLFLIPKNNPPTLTGEFSKP----FKEFIDACLNKDPSFRPTAK 248
Query: 308 SLV 310
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 87 IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+A+K N P +F++EA + + + L LLG C + LV + MP+ L
Sbjct: 39 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLD 97
Query: 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205
++ H + + L + +A+ + Y + R ++ DL A +L + +++ FGL
Sbjct: 98 YV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGL 155
Query: 206 MK-NSRDGKSYSTNLAFTPPEYL-----RTGRVTPESVIYSFGTLLLDLLS 250
+ D K Y+ + P +++ + T +S ++S+G + +L++
Sbjct: 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 22/245 (8%)
Query: 75 VVYKG-KLENQRRIAVKRFNRMAWPDPRQFLE-EARSVGQLRNNRLTNLLGCCCEGDERL 132
VYK + +A+K + D + ++ E + + Q R+ +T G +G +
Sbjct: 16 EVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLW 75
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
++ EY + L + A LR VL LEY +G+ ++ D+ A IL
Sbjct: 76 IIMEYCGGGSCLDLLKPGKLDETYIAFILREVLL---GLEYLHEEGK-IHRDIKAANILL 131
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 248
E+G+ +L+ FG+ S TP PE ++ ++ I+S G ++L
Sbjct: 132 SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIEL 191
Query: 249 LSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
G+ + P L LI N L + +F+ + V L CL +P+ERP
Sbjct: 192 AKGEPPLSDLHPMRVLFLIPKNNPPSLEGN----KFSKP-FKDFVSL---CLNKDPKERP 243
Query: 305 NPKSL 309
+ K L
Sbjct: 244 SAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 170 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 229
ALEY SK +Y DL IL D++G+ +L+ FG K RD ++++ L T PEYL
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 230 GRVTPESV----------IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279
PE + ++ G L+ ++L G PP D N + + L G+
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYEKILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 71 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
+A +Y K ++RI ++ MA + +Q LE+ N+R L E +
Sbjct: 22 RATGKMYACKKLEKKRIKKRKGESMAL-NEKQILEKV-------NSRFVVSLAYAYETKD 73
Query: 131 RL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L LV M L H++H + + + LE + R +Y DL
Sbjct: 74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPEN 132
Query: 190 ILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 246
IL D+ G+ R+S GL + +G K + + PE ++ R T ++ G LL
Sbjct: 133 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 192
Query: 247 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
++++G+ P I+ ++ L E ++++ + L L +P+ER
Sbjct: 193 EMIAGQS-PFQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKMLLCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 219
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEG 278
++ PE L+ + +S I+S G L+++ G++ IPP A + L+++ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 279 QFTDDDGTELVRLASRCL-QYEPRERP 304
+ + + R R L Y P RP
Sbjct: 221 DPAESETSPRPRPPGRPLSSYGPDSRP 247
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 170 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 225
L++ KG +Y DL +L D+DG+ +++ FG+ K + +G+ ++ TP PE
Sbjct: 108 GLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPE 166
Query: 226 YLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALD 261
L+ G+ ESV +SFG LL ++L G+ P H D
Sbjct: 167 ILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTN 218
R+ + + + L Y S + L+ D+ +L + G +L FG+ + NS K+Y
Sbjct: 99 RIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-AKTYVGT 156
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----------HIPPSHALDLIRDRN 267
A+ PE + + S ++S G ++L G+ + P L I D +
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216
Query: 268 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
+L GQF++ + V ++C++ +P+ERP P++L+
Sbjct: 217 PPVLPV----GQFSE----KFVHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 16/146 (10%)
Query: 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEY 173
LT L C D V EY+ L + E H + +A + + L
Sbjct: 63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH---- 118
Query: 174 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFTPPEYLRT 229
SKG +Y DL ++ D +G+ +++ FG+ K N DG K++ + PE +
Sbjct: 119 --SKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY 175
Query: 230 GRVTPESVIYSFGTLLLDLLSGKHIP 255
++FG LL ++L+G P
Sbjct: 176 QPYGKSVDWWAFGVLLYEMLAG-QAP 200
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 223
+A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 105 IASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYL 163
Query: 224 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 261
PE LR + G +L ++L G +PP ++ D
Sbjct: 164 APEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEY 226
+ L Y K + ++ D+ IL + G +L FG+ + K++ ++ PE
Sbjct: 111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPER 170
Query: 227 LRTGRVTPESVIYSFGTLLLDLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQF 280
++ + +S I+S G L++L +G+ + PP +L+ + G+F
Sbjct: 171 IQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-QYIVNEPPPRLPSGKF 229
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ D + CL +PRERP+ K L
Sbjct: 230 SPD----FQDFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 133 LVAEYMPNE---TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
LV EYM ++ L L H+ +K M+ L + L YC K L+ D+
Sbjct: 93 LVFEYMDHDLMGLLESGLVHFSEDHIKSFMK-----QLLEGLNYCHKKN-FLHRDIKCSN 146
Query: 190 ILFDEDGNPRLSTFGLMK--NSRDGKSYSTN----LAFTPPEYLR-TGRVTPESVIYSFG 242
IL + G +L+ FGL + NS + + Y TN L + PPE L R P ++S G
Sbjct: 147 ILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCG 205
Query: 243 TLLLDLLSGKHI 254
+L +L + K I
Sbjct: 206 CILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
+E R + +L + + +LG CE L E+M +++ HL + K A+ +
Sbjct: 52 KEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLLS-KYGAFKEAVIINYT 109
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLM-----KNSRDGK---SY 215
L + L Y + ++ D+ +L D G R++ FG K + G+
Sbjct: 110 EQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQL 168
Query: 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
+AF PE LR + ++S G +++++ + K PP +A L S
Sbjct: 169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNAEKHSNHLALIFKIASA 226
Query: 276 LEGQFTDDDGTELVR-LASRCLQYEPRERPNPKSLV 310
+ + +R + RCL+ +P +RP + L+
Sbjct: 227 TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FT 222
+ L Y SKG L+ DL A +L D DG ++S FG+ K S D N++ +
Sbjct: 119 EGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177
Query: 223 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGK 252
PE + + + + I+S G ++L++ +G+
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 44/211 (20%), Positives = 75/211 (35%), Gaps = 54/211 (25%)
Query: 129 DERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYH- 183
+E L V EY PN L +++ + + K + A+ ALEY SKG + H
Sbjct: 74 EENLYFVLEYAPNGELLQYIRKYGSLDEKCT-----RFYAAEILLALEYLHSKG--IIHR 126
Query: 184 DLNAYRILFDEDGNPRLSTFG--------LMKNSRDGKSYSTNLA--------------- 220
DL IL D+D + +++ FG S G + + +
Sbjct: 127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA 186
Query: 221 -FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNLQMLTD 273
+ PE L S +++ G ++ +L+GK PP I
Sbjct: 187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK--PPFRGSNEYLTFQKILKLEYSFP-- 242
Query: 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
D +L+ + L +P++R
Sbjct: 243 -----PNFPPDAKDLIE---KLLVLDPQDRL 265
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 60/250 (24%), Positives = 96/250 (38%), Gaps = 33/250 (13%)
Query: 76 VYKG-KLENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC---CEGD 129
VY L+ +AVK R DP+ E A + L + NL+ +
Sbjct: 16 VYTAVNLDTGELMAVKEIRIQD---NDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE 72
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
+ + EY TL + L H + L L + L Y S G ++ D+
Sbjct: 73 KVYIFMEYCSGGTLEELLEHGRILDEH--VIRVYTLQLLEGLAYLHSHG-IVHRDIKPAN 129
Query: 190 ILFDEDGNPRLSTFG----LMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE--SV-I 238
I D +G +L FG L N+ +LA TP PE + G+ + I
Sbjct: 130 IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189
Query: 239 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL----VRLASR 294
+S G ++L++ +GK P LD Q++ + D +L R
Sbjct: 190 WSLGCVVLEMATGK--RPWSELD----NEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDR 243
Query: 295 CLQYEPRERP 304
CL+ +P++RP
Sbjct: 244 CLESDPKKRP 253
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH--PMKWA 158
R FL EA +GQ + + +L G + +++ E+M N L L + ++
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLV 109
Query: 159 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---Y 215
LR +A ++Y S+ ++ DL A IL + + ++S FGL + D S Y
Sbjct: 110 GMLR---GIAAGMKY-LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 165
Query: 216 STNLA------FTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
+++L +T PE + + T S ++S+G ++ +++S
Sbjct: 166 TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 219
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDL 262
++ PE L+ + +S I+S G L++L G++ IPP A +L
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 118 LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRL---RVVLHLAQ---A 170
LT L C + +RL V EY+ L +FH ++ + R R + A+
Sbjct: 58 LTQLH-SCFQTKDRLFFVMEYVNGGDL---MFH-----IQRSGRFDEPRARFYAAEIVLG 108
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTP----PE 225
L++ +G +Y DL +L D +G+ +++ FG+ K G + ST TP PE
Sbjct: 109 LQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGTPDYIAPE 166
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 261
L P ++ G LL ++L+G+ P D
Sbjct: 167 ILSYQPYGPAVDWWALGVLLYEMLAGQ--SPFEGDD 200
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 122 LGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
L C + RL LV EY+ L H+ P + A R + AL + +G
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHA-RFYAA-EICIALNFLHERG-I 117
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA---FTPPEYLRTGRVTPES 236
+Y DL +L D DG+ +L+ +G+ K G + ST + PE LR
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
++ G L+ ++++G+ D+I D N M T+ L
Sbjct: 178 DWWALGVLMFEMMAGR-----SPFDIITD-NPDMNTEDYL 211
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.003
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 16/197 (8%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
+VY + L Q RIA+K + EE L++ + LG E +
Sbjct: 23 IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE---YCTSKGRALYHDLNAYRI 190
E +P +L+ L + P+K ++ + Q LE Y + ++ D+ +
Sbjct: 83 FMEQVPGGSLSA-LLRSKWGPLK-DNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNV 139
Query: 191 LFDE-DGNPRLSTFGLMKN----SRDGKSYSTNLAFTPPEYLRTGR--VTPESVIYSFGT 243
L + G ++S FG K + ++++ L + PE + G + I+S G
Sbjct: 140 LVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC 199
Query: 244 LLLDLLSGKHIPPSHAL 260
++++ +GK PP L
Sbjct: 200 TIVEMATGK--PPFIEL 214
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 11/207 (5%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R L E R + +L + L NL + + LV + + L HL + ++
Sbjct: 45 RNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEE-QVK 103
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYST 217
+ + ALEY SKG ++ D+ IL DE G+ ++ F + S S
Sbjct: 104 FWIC-EIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSG 161
Query: 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-RNLQMLTDSCL 276
+ PE L + +S G + L GK H+ + R Q D
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV-- 219
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRER 303
+ TE + ++ L+ +P++R
Sbjct: 220 --LYPATWSTEAIDAINKLLERDPQKR 244
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAF 221
V + +AL + S + ++ DL A IL DG+ +L+ FG+ KN + T +
Sbjct: 108 VCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG- 165
Query: 222 TP----PEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 264
TP PE + T + P ++ I+S G L++L + PP H L+ +R
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME--PPHHELNPMR 215
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.003
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220
+R ++ +A +EY +SK ++ DL A + +E+ ++ FGL K G Y A
Sbjct: 116 VRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCA 174
Query: 221 FTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNL 268
P E L T S +++FG + ++++ P + + LI+ L
Sbjct: 175 SKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL 234
Query: 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
+ D CLE ++ L +C EP+ RP+ + L L
Sbjct: 235 KQPPD-CLE---------DVYELMCQCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 222
++ + AL+Y G ++ D+ A IL GN +L FG+ S + T
Sbjct: 106 IIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGT 164
Query: 223 P----PEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 277
P PE + G+ I+S G + ++ +G PP +D R ML
Sbjct: 165 PYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFR---AMMLIPKSKP 219
Query: 278 GQFTDDDGTELVR-LASRCLQYEPRER 303
+ D+ ++L+R + CL EP+ER
Sbjct: 220 PRLEDNGYSKLLREFVAACLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.004
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
L E+R + R+ LT+L D V EY+ L FH + R R
Sbjct: 43 LTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFSEDRTRF 99
Query: 164 V-LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKSYSTN 218
+ AL+Y S G+ +Y DL ++ D+DG+ +++ FGL K ++ K++
Sbjct: 100 YGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 34/173 (19%)
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP 224
+A+ +E+ S+ + ++ DL A IL E+ ++ FGL +RD + P
Sbjct: 180 FQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGL---ARD--------IYKDP 227
Query: 225 EYLRTGR-------VTPESV----------IYSFGTLLLDLLS-GKHIPPSHALDLIRDR 266
+Y+R G + PES+ ++SFG LL ++ S G P +D R
Sbjct: 228 DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287
Query: 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
L+ T T E+ + C P +RP LV L L +E
Sbjct: 288 RLKEGTRMRAPEYATP----EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.96 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.96 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.94 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.92 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.88 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.87 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.85 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.85 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.84 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.84 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.82 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.8 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.8 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.79 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.78 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.77 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.76 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.75 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.7 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.7 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.7 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.66 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.65 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.65 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.65 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.63 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.61 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.61 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.6 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.59 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.59 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.57 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.56 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.54 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.54 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.54 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.52 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.49 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.48 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.48 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.46 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.44 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.42 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.41 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.41 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.4 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.4 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.38 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.37 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.36 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.36 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.35 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.34 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.34 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.33 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.33 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.3 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.29 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.29 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.29 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.29 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.28 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.28 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.27 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.27 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.27 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.25 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.25 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.25 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.24 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.23 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.23 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.22 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.21 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.19 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.17 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.16 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.15 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.15 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.14 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.14 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.12 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.11 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.11 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.11 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.11 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.11 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-53 Score=411.88 Aligned_cols=273 Identities=36% Similarity=0.644 Sum_probs=234.6
Q ss_pred CccccCHHHHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEE
Q 011092 43 SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122 (494)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 122 (494)
..+.|++.++..+|+||+..+++ |+|+||.||+|..++|..||||++........++|..|+.++.+++|||+|+|+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 56789999999999999999998 899999999999999999999998776543145699999999999999999999
Q ss_pred EEEecCC-ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CcccccccccceeecCCCCeE
Q 011092 123 GCCCEGD-ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDEDGNPR 199 (494)
Q Consensus 123 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~ivH~Dlkp~Nill~~~~~~k 199 (494)
|||.+.+ ..+|||||+++|||.++|+.....+++|..+++|+.++++||+|||... +||||||||+|||||+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 4999999999999999998643228999999999999999999999965 499999999999999999999
Q ss_pred EcccCCcccCCC-CCcc----ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc-----------hhHHh
Q 011092 200 LSTFGLMKNSRD-GKSY----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-----------ALDLI 263 (494)
Q Consensus 200 l~Dfgla~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~-----------~~~~~ 263 (494)
|+|||+|+.... .... .||.+|++||++..+..|.|+|||||||+|+||+||+.+.... ....+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999987664 3322 7899999999999999999999999999999999999765421 11233
Q ss_pred hhcccccccccccc-CCCCc-hhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 264 RDRNLQMLTDSCLE-GQFTD-DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 264 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.......+.++.+. ...+. .....+..++.+|++.+|..||+|.+|++.|+.+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 34456677777765 44443 456778999999999999999999999999966543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=385.91 Aligned_cols=244 Identities=19% Similarity=0.283 Sum_probs=208.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCc-cceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-RLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-~~lv~e 136 (494)
++.+.++.||+|..|+||++.++ +++.+|+|++...... ..+++.+|+++++.++||+||.+||.|..++. ..|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 46677899999999999999954 6899999999554322 36789999999999999999999999999985 999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCCC--C
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 213 (494)
||+||||++++.. .+.+++...-+|+.+|++||.|||. .+ ||||||||+|||++..|.+||||||.++...+. .
T Consensus 159 YMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 159 YMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred hcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhcc
Confidence 9999999999973 4679999999999999999999996 65 999999999999999999999999998866543 5
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc-----hhHHhhhccccccccccccCCCCch-hHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-----ALDLIRDRNLQMLTDSCLEGQFTDD-DGTE 287 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 287 (494)
++.||..|||||.+.+..|+.++||||||++++|+++|+.|++.. ..-.+... +.+. .+...|.. ++++
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~----Iv~~-ppP~lP~~~fS~e 310 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCA----IVDE-PPPRLPEGEFSPE 310 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHH----HhcC-CCCCCCcccCCHH
Confidence 789999999999999999999999999999999999999888663 11111111 1111 12234444 7789
Q ss_pred HHHHHHHHccCCCCCCCChHHHHH
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+..|+..||++||.+|||+.++++
T Consensus 311 f~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 311 FRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 999999999999999999999987
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-50 Score=390.47 Aligned_cols=250 Identities=27% Similarity=0.423 Sum_probs=211.3
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCC-ccceeeecCCCCC
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD-ERLLVAEYMPNET 142 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-~~~lv~e~~~~gs 142 (494)
..+|.|+||+||+|.+.+...||||.+....... .+.|.+|+.+|.+++|||||+++|+|..+. ..++||||+++|+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs 126 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS 126 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence 4479999999999999654459999997654333 458999999999999999999999999987 7899999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCC----CCcccc
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
|.++++......+++..++.|+.+|++||.|||++++||||||||+|||++.++ ++||+|||+++.... .....|
T Consensus 127 L~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~G 206 (362)
T KOG0192|consen 127 LSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAG 206 (362)
T ss_pred HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCC
Confidence 999998644678999999999999999999999997689999999999999997 999999999976543 233688
Q ss_pred CCCcCCCcCCC--CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 218 NLAFTPPEYLR--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 218 t~~y~aPE~~~--~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
|+.|||||++. ...++.|+||||||+++|||+||+.||............... .....++..++..+..++..|
T Consensus 207 T~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~----~~Rp~~p~~~~~~l~~l~~~C 282 (362)
T KOG0192|consen 207 TYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG----GLRPPIPKECPPHLSSLMERC 282 (362)
T ss_pred CccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc----CCCCCCCccCCHHHHHHHHHh
Confidence 99999999999 568999999999999999999999998765432222222211 222234445778999999999
Q ss_pred ccCCCCCCCChHHHHHHhcccccc
Q 011092 296 LQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
|..||..||++.+++..|+.+...
T Consensus 283 W~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 283 WLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHh
Confidence 999999999999999999987664
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-50 Score=374.33 Aligned_cols=247 Identities=19% Similarity=0.266 Sum_probs=205.2
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+|.+..+||+|+|++||+|++ .++..||||.+.... ....+.+..|+.+|+.++|||||.+++++..++.+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 45677778899999999999995 458999999997653 333566889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC------CCeEEcccCCcccC
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------GNPRLSTFGLMKNS 209 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~------~~~kl~Dfgla~~~ 209 (494)
|||.||+|.++++. .+.+++.+...++.||+.||++||+++ ||||||||.||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999984 457999999999999999999999999 9999999999999754 45899999999988
Q ss_pred CCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 210 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 210 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
... .+.+|++.|||||+++...|+.|+|+||+|+|||++++|+.||.......+....... .......+...+.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~---~~~~~~~~~~~s~ 242 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG---NEIVPVLPAELSN 242 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc---ccccCchhhhccC
Confidence 765 4678999999999999999999999999999999999999999876555444321111 1111122333445
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+++...++.+|.+|-++.+...
T Consensus 243 ~~~~Ll~~ll~~~~~~~~~~~~~~~ 267 (429)
T KOG0595|consen 243 PLRELLISLLQRNPKDRISFEDFFD 267 (429)
T ss_pred chhhhhhHHHhcCccccCchHHhhh
Confidence 5668888888888888877766553
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-49 Score=381.65 Aligned_cols=251 Identities=27% Similarity=0.421 Sum_probs=214.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
..++++||+|-||.||.|.+.....||+|.++... ...+.|.+|+++|++|+|+|||+++|+|..++.++|||||++.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 45778999999999999999877899999998864 34678999999999999999999999999988999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcc-----c
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-----S 216 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~-----~ 216 (494)
+|.++|....+..+...+.+.++.|||.||+||++++ +|||||-..|||++++..+||+|||||+...+.... .
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k 365 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK 365 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence 9999998766778999999999999999999999999 999999999999999999999999999965544321 1
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
-++.|+|||.+..+.++.|||||||||+||||+| |+.|+++.......+. ......-..|..+|.++++++..|
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~-----le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLEL-----LERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHH-----HhccCcCCCCCCCCHHHHHHHHHH
Confidence 2578999999999999999999999999999999 4555555433222211 111122234667889999999999
Q ss_pred ccCCCCCCCChHHHHHHhcccccc
Q 011092 296 LQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
|..+|++|||++.+...|+.+...
T Consensus 441 W~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 441 WHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred hhCCcccCCCHHHHHHHHHHhhhc
Confidence 999999999999999999887643
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-50 Score=354.98 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEE-EEecCCc-cceee
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLG-CCCEGDE-RLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~-~~lv~ 135 (494)
++.++++||+|+||.||++. ..+|..||.|.++...... .+.+..|+.+|++|+|||||++++ .+.+++. ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 56778888999999999999 7789999999998554332 556889999999999999999998 4544444 89999
Q ss_pred ecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 136 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 136 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
|||.+|+|..++.+. ..+.+++..+++++.|++.||..+|++ +.|+||||||.||+|+.+|.+||+|||+++...
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 999999999999853 356799999999999999999999993 339999999999999999999999999999877
Q ss_pred CCC----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC-chhH
Q 011092 211 DGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDDG 285 (494)
Q Consensus 211 ~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 285 (494)
... +++|||.||+||.+.+.+|+.+|||||+||++|||..-.+||.+.....+....-+.-.. .+| ...+
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~-----~~p~~~YS 254 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP-----PLPDEHYS 254 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC-----CCcHHHhh
Confidence 653 568999999999999999999999999999999999999999988666555444333111 123 4567
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHHh
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
..+..||..|+..||..||+.-.++..+
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 8999999999999999999865555444
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=369.18 Aligned_cols=248 Identities=20% Similarity=0.259 Sum_probs=205.3
Q ss_pred CccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC-------hHHHHHHHHHHhccCCCCCccEEEEEecCCc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 130 (494)
++.|.+.+.+|+|+||.|-+|. ..+|+.||||.++...... .....+|+++|++|+|||||++++++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3456677889999999999999 6679999999997532211 1234699999999999999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC---CCeEEcccCCcc
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMK 207 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgla~ 207 (494)
.||||||+.||.|.+.+. ..+.+.++.-..+++|++.|+.|||+.| |+||||||+|||++.+ ..+||+|||+|+
T Consensus 251 ~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999999997 4566888888999999999999999999 9999999999999765 779999999999
Q ss_pred cCCCC---CccccCCCcCCCcCCCCCC--C-CCCCCchhHHHHHHHHHhCCCCCCCchhHH-hhhccccccccccccCCC
Q 011092 208 NSRDG---KSYSTNLAFTPPEYLRTGR--V-TPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 208 ~~~~~---~~~~~t~~y~aPE~~~~~~--~-~~~sDv~slG~vl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 280 (494)
..... .+++||+.|.|||++.+.. + ..+.|+||+|||||-+++|.+||.++..+. ..+........ ..+..
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~--f~p~~ 405 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA--FGPLQ 405 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc--ccChh
Confidence 87654 5789999999999998654 3 348899999999999999999997664433 22222211111 11123
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...++++..++|.+||..||++|||+.|+++
T Consensus 406 w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 406 WDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 4467899999999999999999999999997
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-48 Score=375.92 Aligned_cols=242 Identities=18% Similarity=0.226 Sum_probs=212.2
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.|.+-..||+|+|..||.++. .+|..||+|++.+.. ....+...+||+|.+.|+|||||+++++|++.++.|||.|
T Consensus 19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLE 98 (592)
T KOG0575|consen 19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLE 98 (592)
T ss_pred eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEE
Confidence 455566679999999999995 889999999997632 2236678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----C
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 212 (494)
+|++++|..++. ..+++++.+++.++.||+.||.|||+.+ |+|||||..|++|+++.++||+|||||..... .
T Consensus 99 LC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk 175 (592)
T KOG0575|consen 99 LCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK 175 (592)
T ss_pred ecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCccccc
Confidence 999999999887 5678999999999999999999999999 99999999999999999999999999987653 3
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
.+.+|||.|.|||++.....+..+||||+|||+|.|++|++||............... .-..|..++.+..+||
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~------~Y~~P~~ls~~A~dLI 249 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN------EYSMPSHLSAEAKDLI 249 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc------CcccccccCHHHHHHH
Confidence 5789999999999999888999999999999999999999999876554443322111 1234567778999999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.++|+.||.+|||+++|+.
T Consensus 250 ~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 250 RKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHhcCCcccCCCHHHHhc
Confidence 9999999999999999996
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-48 Score=356.95 Aligned_cols=238 Identities=21% Similarity=0.270 Sum_probs=205.8
Q ss_pred CccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.++.++++.||+|+||.||.++ .++++.+|+|++++.... ..+....|..+|.+++||.||.++..|.+...+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4455677777999999999999 455999999999764322 356788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR---- 210 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 210 (494)
+||+.||.|..+|. ..+.+++..+.-++.+|+.||.|||++| ||||||||+|||||.+|+++|+|||+++...
T Consensus 104 ld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 99999999999997 4567999999999999999999999999 9999999999999999999999999998543
Q ss_pred CCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 211 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 211 ~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
...+++||+.|||||++.+..++..+|+||||+++|||++|.+||.......+.+...... ....+..++.+.++
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ard 255 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEARD 255 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHHH
Confidence 2356799999999999999999999999999999999999999998876555554443332 11223346689999
Q ss_pred HHHHHccCCCCCCC
Q 011092 291 LASRCLQYEPRERP 304 (494)
Q Consensus 291 li~~cl~~dp~~Rp 304 (494)
++.++|..||.+|.
T Consensus 256 ll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 256 LLKKLLKRDPRQRL 269 (357)
T ss_pred HHHHHhccCHHHhc
Confidence 99999999999995
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-48 Score=344.51 Aligned_cols=249 Identities=21% Similarity=0.312 Sum_probs=199.9
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..|+.++.+|+|+||+||+++. .+|+.||||++..+.... .+-.++|+++|++++|||+|.++.+|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 3577889999999999999995 459999999997654322 4557899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-CC--
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GK-- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~~-- 213 (494)
||+..-|.+ |.+ ....++...+.++++|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.... +.
T Consensus 82 ~~dhTvL~e-Le~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDHTVLHE-LER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecchHHHHH-HHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 998554444 433 3567999999999999999999999999 99999999999999999999999999997763 22
Q ss_pred -ccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH----hh----------------hcccccc
Q 011092 214 -SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IR----------------DRNLQML 271 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~----~~----------------~~~~~~~ 271 (494)
.+..|..|.|||.+.| ..|+..+|||++||++.||++|.+.|++...-. +. ...+..+
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 3567899999999988 569999999999999999999998887752211 00 0011111
Q ss_pred cccc-----ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 TDSC-----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ~~~~-----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.-+. ....--+..+..+.+|++.||+.||.+|++.++++.
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111 111111234567899999999999999999999984
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=353.43 Aligned_cols=245 Identities=21% Similarity=0.331 Sum_probs=201.3
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCC--ccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e~~ 138 (494)
....+.||+|+||+||++.. ++|...|||.+........+.+.+|+.+|.+++|||||+++|...... .++++|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 34456679999999999995 458999999997654333667899999999999999999999855444 589999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEEcccCCcccCCC------
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD------ 211 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~------ 211 (494)
++|+|.+++...++ ++++..+..++.||+.||.|||++| +|||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999986544 7999999999999999999999999 999999999999999 79999999999886552
Q ss_pred -CCccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCc--hhHHhhhccccccccccccCCCCchhHHH
Q 011092 212 -GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH--ALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 212 -~~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
.....||+.|||||++..+. ...++|||||||+++||+||+.|+... ....+.. ..... ..+.+|..++.+
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~----ig~~~-~~P~ip~~ls~~ 251 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLL----IGRED-SLPEIPDSLSDE 251 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHH----HhccC-CCCCCCcccCHH
Confidence 23568999999999999643 345999999999999999998776542 1111111 11111 122567778899
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHh
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
..+|+.+|+..+|..|||+.+++...
T Consensus 252 a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 252 AKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 99999999999999999999999844
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-46 Score=324.75 Aligned_cols=253 Identities=22% Similarity=0.305 Sum_probs=206.6
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.|..++.+|+|.||+||+|+ ..+|+.||||+++.....+ ....++|++.|+.++|+||+.++++|...+...||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 46677888999999999999 6779999999998765433 45678999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
++ .+|...+++ +...++...+..++.++++||+|||++. |+||||||.|+|++++|.+||+|||+++......
T Consensus 83 m~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 98 899998875 4578999999999999999999999999 9999999999999999999999999999876432
Q ss_pred ccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc-----------------------cc
Q 011092 214 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------------------LQ 269 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~-----------------------~~ 269 (494)
....|..|.|||.+.|.. |+...||||.|||+.||+-|.+.|++...-...... ++
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 235688999999998765 899999999999999999999777665321111111 11
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
..+.+.. ...-...+..+.+|+.++|..||.+|+|+.++++ ..+...
T Consensus 240 ~~P~~~~-~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~--~~yf~~ 286 (318)
T KOG0659|consen 240 QFPKPPL-NNLFPAASSDALDLLSKMLTYNPKKRITASQALK--HPYFKS 286 (318)
T ss_pred cCCCCcc-ccccccccHHHHHHHHhhhccCchhcccHHHHhc--chhhhc
Confidence 1111111 1122334567799999999999999999999987 444444
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=359.86 Aligned_cols=245 Identities=20% Similarity=0.318 Sum_probs=211.8
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+.....||.|+.|.||.+. ..++..||||++........+-++.|+.+|+..+|+|||.+++.|...+.+|+||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 345666788999999999999 6678999999998877666777899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
+||+|.+.+. ...+++.++..|+++++.||+|||.+| |+|||||.+|||++.+|.+||+|||++...... .+
T Consensus 353 ~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 353 EGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred CCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999994 456999999999999999999999999 999999999999999999999999998765543 46
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..||+.|||||+.....|+++.||||||++++||+.|.+||..+..-.. .........+....+..++..+.+|+.+
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA---lyLIa~ng~P~lk~~~klS~~~kdFL~~ 505 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGTPKLKNPEKLSPELKDFLDR 505 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH---HHHHhhcCCCCcCCccccCHHHHHHHHH
Confidence 7899999999999999999999999999999999999998864321111 1111122233334566788999999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.|+.+||++.++|+
T Consensus 506 cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 506 CLVVDVEQRASAKELLE 522 (550)
T ss_pred HhhcchhcCCCHHHHhc
Confidence 99999999999999997
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-45 Score=342.81 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=208.6
Q ss_pred cCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
-|-.+|++..+||.|..++||+|+ ...+..||||++.-..... .+.+.+|+..++.++||||+.++..|..+..+|+|
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 345678899999999999999999 6778999999997655443 57899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|.||.+||+.+++...-...+.+..+..|++++++||.|||.+| .||||||+.||||+.+|.+||+|||.+....+.
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999998766677999999999999999999999999 999999999999999999999999975432211
Q ss_pred ------CccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh----hccccccccccccCCC
Q 011092 213 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----DRNLQMLTDSCLEGQF 280 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~ 280 (494)
.++.||+.|||||++.. ..|+.|+||||||++..||.+|..||.....-.+. ++....+.......+.
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~ 261 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDE 261 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHH
Confidence 45688999999999543 34999999999999999999999988543221111 1111111111111122
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
....+..+..++..||++||.+|||++++++
T Consensus 262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 262 DKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 2335678999999999999999999999995
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=330.08 Aligned_cols=263 Identities=19% Similarity=0.242 Sum_probs=212.7
Q ss_pred HHHhcCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecC-
Q 011092 53 KNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG- 128 (494)
Q Consensus 53 ~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 128 (494)
...+++.++++++.+|++|+||+||+|+ .++++.||+|+++...... .-.-++||.+|.+++|||||.+..+.+..
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 4567778889999999999999999999 5679999999998654222 33468999999999999999999988754
Q ss_pred -CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 129 -DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 129 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
+.+|+|||||+ .+|..++... +.+++..++..++.|+++|++|||.+. |+||||||+|+|+++.|.+||+|||+|+
T Consensus 149 ~d~iy~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 149 MDKIYIVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred cceeeeeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhh
Confidence 56999999998 7899988753 468999999999999999999999999 9999999999999999999999999999
Q ss_pred cCCCC----CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------c-
Q 011092 208 NSRDG----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------M- 270 (494)
Q Consensus 208 ~~~~~----~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-----------~- 270 (494)
.+... .....|..|.|||.+.+.+ |+++.|+||+|||+.||+++++.|++...-......+. .
T Consensus 226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY 305 (419)
T ss_pred hhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence 87765 3456789999999998865 89999999999999999999988876532111111100 0
Q ss_pred -------------cccccccCCCCch-hHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 271 -------------LTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 271 -------------~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
.+...+...++.. +++.-.+|+..+|..||.+|.|+++.|+ ..+..+.
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~--h~~F~e~ 367 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK--HEYFRET 367 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc--ccccccC
Confidence 0111111122222 4578889999999999999999999998 5666553
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-45 Score=347.48 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=202.2
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecC--Ccccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~lv 134 (494)
+.++.|+.||+|+||.||+|+ ..+|+.||+|++..... ....-..+||.||++|.||||++|.+...+. ..+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 457788899999999999999 67799999999987653 3355677999999999999999999999886 689999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
+|||+ -+|..++.. ..-.|++.++..++.|++.||.|+|++| |+|||||.+|||||.+|.+||+|||||+.+....
T Consensus 197 FeYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 197 FEYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred Eeccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 99998 788888853 3457999999999999999999999999 9999999999999999999999999999765433
Q ss_pred ----ccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhc-----------ccc--cccccc
Q 011092 214 ----SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NLQ--MLTDSC 275 (494)
Q Consensus 214 ----~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~-----------~~~--~~~~~~ 275 (494)
..+.|..|.|||.+.|.. |+.+.|+||.||||.||++|++++++...-..... .+. .++...
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 345689999999998865 99999999999999999999988876422111100 000 111000
Q ss_pred -c--cCC-------CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 276 -L--EGQ-------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 276 -~--~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ... ....++....+|+..+|..||.+|.|+.+++.
T Consensus 354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 000 11235678889999999999999999999987
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-45 Score=349.48 Aligned_cols=243 Identities=20% Similarity=0.323 Sum_probs=207.0
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
|....-+.-+|+|+.|-||+|++. ++.||||+++.-. ..+|+-|++|+||||+.+.|+|.....+|||||||
T Consensus 123 Fe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 123 FEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred HHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 333334567799999999999985 4789999986432 35788899999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Ccc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSY 215 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 215 (494)
..|-|.+.|+ .+++++......|..+|+.||.|||.+. |||||||.-||||+.+..+||+|||-++...+. ..+
T Consensus 195 a~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSF 271 (904)
T KOG4721|consen 195 AQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSF 271 (904)
T ss_pred ccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhh
Confidence 9999999997 5678999999999999999999999998 999999999999999999999999988765543 467
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.||..|||||++...+++.|+||||||||||||+||..|+..-.. ...+..+....+....|..+|+.+.-|+++|
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVGsNsL~LpvPstcP~GfklL~Kqc 347 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQC 347 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----heeEEeccCCcccccCcccCchHHHHHHHHH
Confidence 899999999999999999999999999999999999988753221 1223333333344445677788999999999
Q ss_pred ccCCCCCCCChHHHHHHhccc
Q 011092 296 LQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~ 316 (494)
|+..|..||++++++..|+-.
T Consensus 348 w~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 348 WNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HhcCCCCCccHHHHHHHHhhc
Confidence 999999999999999988644
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-46 Score=349.56 Aligned_cols=249 Identities=19% Similarity=0.304 Sum_probs=205.2
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccC-CCCCccEEEEEecCC-ccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGD-ERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~-~~~lv~ 135 (494)
..|.+++++|.|+||.||+|+ ..+|..||||+++..-.. ..-.-+||+..|++|. |||||++.+++.+.+ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 468899999999999999999 667999999999764322 1223468999999997 999999999999988 899999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
|||+ .+|.+++.++ ++.|++..+..|+.||++||+|+|.+| +.|||+||+|||+..+..+||+|||+|+.....
T Consensus 90 E~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY 166 (538)
T KOG0661|consen 90 EFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY 166 (538)
T ss_pred Hhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCc
Confidence 9997 8999999875 789999999999999999999999999 999999999999999999999999999987654
Q ss_pred CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-Hh-h--------------hc---------
Q 011092 213 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LI-R--------------DR--------- 266 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~-~--------------~~--------- 266 (494)
..++.|..|+|||++.. +-|+.+.|||++|||++|+.+-++.|++...- .+ + .+
T Consensus 167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence 35677999999998864 56899999999999999999999989874211 10 0 00
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
.........+..-.+ ..+.+..++|.+|+.+||.+|||+.++++.
T Consensus 247 ~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 247 RFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 000111111111122 367899999999999999999999999974
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=326.52 Aligned_cols=234 Identities=18% Similarity=0.218 Sum_probs=204.7
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+.+.+..+|.|+||.|.+++ ..+|..+|+|++++...-. .+....|..+|+.+.||.++++++.|.+.+.++||||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 45566777999999999999 5568999999997644322 4567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Ccc
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 215 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 215 (494)
|++||.|..+++ +.+++++....-++.||+.||+|||+++ |++|||||+|||||.+|.+||+|||+|+..... -+.
T Consensus 125 yv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~Tl 201 (355)
T KOG0616|consen 125 YVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTL 201 (355)
T ss_pred ccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEe
Confidence 999999999997 4578999999999999999999999999 999999999999999999999999999976544 477
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
+||+.|+|||.++..++..++|+|||||++|||+.|.+||..+....+.+...... -.+|...+.++.+|+.++
T Consensus 202 CGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~------v~fP~~fs~~~kdLl~~L 275 (355)
T KOG0616|consen 202 CGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK------VKFPSYFSSDAKDLLKKL 275 (355)
T ss_pred cCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc------ccCCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998765544444333221 245667778999999999
Q ss_pred ccCCCCCC
Q 011092 296 LQYEPRER 303 (494)
Q Consensus 296 l~~dp~~R 303 (494)
|+.|-.+|
T Consensus 276 L~vD~t~R 283 (355)
T KOG0616|consen 276 LQVDLTKR 283 (355)
T ss_pred HhhhhHhh
Confidence 99999999
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=371.54 Aligned_cols=250 Identities=27% Similarity=0.398 Sum_probs=211.4
Q ss_pred cccccccCCCCCCCeEEEEEEcC------CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
....+++||+|+||.||+|...+ ...||||.++..... ...+|.+|++++..++|||||+|+|+|.+++..++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 34567889999999999998432 357999999987655 47789999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEc
Q 011092 134 VAEYMPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~ 201 (494)
|+|||..|+|.++|.... ..+++..+.+.|+.||+.||.||-+.. +|||||-..|+||+++..|||+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEec
Confidence 999999999999997431 123889999999999999999999997 9999999999999999999999
Q ss_pred ccCCcccCCCCCcc------ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCch----hHHhhhccccc
Q 011092 202 TFGLMKNSRDGKSY------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHA----LDLIRDRNLQM 270 (494)
Q Consensus 202 Dfgla~~~~~~~~~------~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~----~~~~~~~~~~~ 270 (494)
||||++..-....+ .-.++||+||.+..+++|++||||||||||||++| |+-|+.+.. +..++.+..
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-- 723 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-- 723 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc--
Confidence 99999865443222 22589999999999999999999999999999999 455554432 222333322
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
-..|.++|.++++|+..||+.+|++||++++|...|+.+....
T Consensus 724 -------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 724 -------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred -------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 2456778899999999999999999999999999999886543
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-44 Score=348.68 Aligned_cols=250 Identities=21% Similarity=0.251 Sum_probs=210.8
Q ss_pred CccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCC----CC-CChHHHHHHHHHHhccC-CCCCccEEEEEecCCcc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM----AW-PDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDER 131 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~ 131 (494)
...+.+.+.||+|+||.|+.|. ..++..||+|++... .. ...+.+.+|+.+++.++ ||||++++.++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 3467777888999999999998 556899999977653 11 22456678999999998 99999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR 210 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 210 (494)
++||||+.||+|.+++.. .+++++.....++.|++.|++|||+.| |+||||||+|||++.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 999999999999999974 578999999999999999999999999 9999999999999999 999999999998762
Q ss_pred ----CCCccccCCCcCCCcCCCCCC-CC-CCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 211 ----DGKSYSTNLAFTPPEYLRTGR-VT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 211 ----~~~~~~~t~~y~aPE~~~~~~-~~-~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
...+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||.......+....... .-.+|..+
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~------~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG------EFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC------CccCCCCc
Confidence 235788999999999999877 75 6899999999999999999999875544333331111 11234445
Q ss_pred -HHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 285 -GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 285 -~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.++..++.+||..||.+|+|+.+++ ...+...
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~--~h~w~~~ 280 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEIL--EHPWFQK 280 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHh--hChhhcc
Confidence 78999999999999999999999999 4555554
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=347.52 Aligned_cols=238 Identities=19% Similarity=0.271 Sum_probs=204.9
Q ss_pred ccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+.+.||+|+||+||||+ ..+.+.||+|.+.+.... +.+.+.+|++|++.++|||||.++++|+...+.|+|+||+.|
T Consensus 6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g 85 (808)
T KOG0597|consen 6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG 85 (808)
T ss_pred HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence 34445999999999999 556899999999765432 356789999999999999999999999999999999999985
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----ccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYS 216 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~~ 216 (494)
+|..++. ..+.++++.+..|+.+++.||.|||+.+ |+|||+||.|||++.+|.+|+||||+|+...... ...
T Consensus 86 -~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 86 -DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred -hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence 9999997 4567999999999999999999999998 9999999999999999999999999999765543 457
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
||+.|||||...+.+|+..+|+||+|||+||+++|++||....+..+-...... + ...|...+..+..+++.+|
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d---~---v~~p~~~S~~f~nfl~gLL 235 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD---P---VKPPSTASSSFVNFLQGLL 235 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC---C---CCCcccccHHHHHHHHHHh
Confidence 899999999999999999999999999999999999998765543333222221 1 1234567789999999999
Q ss_pred cCCCCCCCChHHHHH
Q 011092 297 QYEPRERPNPKSLVT 311 (494)
Q Consensus 297 ~~dp~~Rps~~~vl~ 311 (494)
.+||..|.|..+++.
T Consensus 236 ~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 236 IKDPAQRLTWTDLLG 250 (808)
T ss_pred hcChhhcccHHHHhc
Confidence 999999999999985
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=344.42 Aligned_cols=243 Identities=20% Similarity=0.273 Sum_probs=208.3
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+....+.||.|+|++|++|+ ..+++.||||++.+... ...+-..+|-.+|.+| .||.|++|+..|.+...+|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 44455666999999999999 66799999999965321 2244567899999999 8999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 211 (494)
||++||+|.++|.+ -+.|++.....++.+|+.||+|||+.| ||||||||+|||||+++++||+|||-|+....
T Consensus 154 e~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred EecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 99999999999985 367999999999999999999999999 99999999999999999999999999885431
Q ss_pred -----------C--CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccC
Q 011092 212 -----------G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 212 -----------~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
. .+++||-.|.+||++..+..++.+|+|+||||||+|+.|.+||.......+-+..+.. .-
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l------~y 304 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL------DY 304 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh------cc
Confidence 1 3478999999999999999999999999999999999999999776554444433321 22
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
.+|...++.+.+|+.++|..||.+|+|..+|.+.
T Consensus 305 ~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 305 EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 4566777899999999999999999999998764
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=337.75 Aligned_cols=261 Identities=17% Similarity=0.225 Sum_probs=210.0
Q ss_pred CCCccccCHHHHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCC
Q 011092 41 LPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNR 117 (494)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpn 117 (494)
+..++.++..++. +.... .+|+|++|.||+|.. +|+.||||.++...... .+.|.+|+.++.+++|||
T Consensus 9 ~~~~~~i~~~~i~-----~~~~~---~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 79 (283)
T PHA02988 9 INDIKCIESDDID-----KYTSV---LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNN 79 (283)
T ss_pred cCcceecCHHHcC-----CCCCe---EEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCC
Confidence 3445666777762 11122 348999999999998 68899999997654333 467889999999999999
Q ss_pred CccEEEEEec----CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceee
Q 011092 118 LTNLLGCCCE----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILF 192 (494)
Q Consensus 118 Iv~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill 192 (494)
|++++|++.+ ....++||||++||+|.+++.. .+.+++.....++.+++.||.|||+. + ++||||||+|||+
T Consensus 80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill 156 (283)
T PHA02988 80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLV 156 (283)
T ss_pred EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEE
Confidence 9999999876 3467899999999999999973 45789999999999999999999985 6 8899999999999
Q ss_pred cCCCCeEEcccCCcccCCCC-CccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc
Q 011092 193 DEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269 (494)
Q Consensus 193 ~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~ 269 (494)
++++.+||+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......+......
T Consensus 157 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~ 236 (283)
T PHA02988 157 TENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN 236 (283)
T ss_pred CCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 99999999999998754432 34567899999999976 6789999999999999999999999876543322221111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
. ......+...+..+.+++.+||+.||.+|||+.+++..|+.+.
T Consensus 237 ~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 237 K----NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred c----CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1 1111233356788999999999999999999999999998765
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=349.19 Aligned_cols=249 Identities=21% Similarity=0.348 Sum_probs=206.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+..+..+||+|+||+||+|.+.+ .||||+++...... .+.|..|+.++++-+|.||+-+.|+|..+.. .||+.+|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwC 469 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWC 469 (678)
T ss_pred Hhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhc
Confidence 44566788999999999999755 49999998766543 5789999999999999999999999998776 9999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC------C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 212 (494)
.|.||..+++-. ...|...+.+.|+.||+.||.|||.++ |||||||..||+|.++++|||+|||++..... -
T Consensus 470 eGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~ 547 (678)
T KOG0193|consen 470 EGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL 547 (678)
T ss_pred cCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence 999999999853 356889999999999999999999999 99999999999999999999999999864321 1
Q ss_pred CccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccc---cCCCCchhHH
Q 011092 213 KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGT 286 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 286 (494)
....|...|||||+++. .+|++.+||||||+|+|||+||..|+.....+.+ +..+....+ .......++.
T Consensus 548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI----ifmVGrG~l~pd~s~~~s~~pk 623 (678)
T KOG0193|consen 548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI----IFMVGRGYLMPDLSKIRSNCPK 623 (678)
T ss_pred CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe----EEEecccccCccchhhhccCHH
Confidence 23456789999999864 4699999999999999999999998875433322 222222211 1123446778
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
++.+|+..||..++++||.+.+|+..|+.+.+
T Consensus 624 ~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 624 AMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 99999999999999999999999998887765
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=348.86 Aligned_cols=253 Identities=23% Similarity=0.343 Sum_probs=200.8
Q ss_pred cccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCC-cc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD-ER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~-~~ 131 (494)
.+++.+.||.|+||.||+|.. .++..||||+++..... ....+.+|+.++..+ +||||++++++|...+ ..
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 456778889999999999973 23568999999754322 245789999999999 8999999999987644 57
Q ss_pred ceeeecCCCCCHHHHhcccC------------------------------------------------------------
Q 011092 132 LLVAEYMPNETLAKHLFHWE------------------------------------------------------------ 151 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 151 (494)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 89999999999999986421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC------CccccCCCcCCCc
Q 011092 152 THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPE 225 (494)
Q Consensus 152 ~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE 225 (494)
..++++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 134788899999999999999999999 999999999999999999999999998764322 1233467899999
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCC
Q 011092 226 YLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304 (494)
Q Consensus 226 ~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 304 (494)
++.+..++.++|||||||++|||++ |..||............. ... .....+...+..+.+++.+||+.||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRL---KDG-TRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---hcC-CCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998889999999999999999997 888876532211100000 000 01122345567899999999999999999
Q ss_pred ChHHHHHHhccccc
Q 011092 305 NPKSLVTALSPLQK 318 (494)
Q Consensus 305 s~~~vl~~L~~~~~ 318 (494)
|+.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999987754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-44 Score=341.23 Aligned_cols=248 Identities=17% Similarity=0.180 Sum_probs=205.1
Q ss_pred CCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+.++.+++..||+|+||.||+|+ ..+|..+|+|++++... ...+....|-.+|....+|+||+|+-.|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45677888899999999999999 55699999999987543 235678899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||+|||++..+|. ....|++.....++.+++.|+..||+.| +|||||||+|+|||..|++||+||||+.....
T Consensus 219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999997 4578999999999999999999999999 99999999999999999999999999752100
Q ss_pred -----------------------C--------------------------CccccCCCcCCCcCCCCCCCCCCCCchhHH
Q 011092 212 -----------------------G--------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFG 242 (494)
Q Consensus 212 -----------------------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG 242 (494)
. -+..|||-|||||++.+..|+..+|+||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 013578999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCC---ChHHHHH
Q 011092 243 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVT 311 (494)
Q Consensus 243 ~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~vl~ 311 (494)
||+||||.|.+||.++.....-.........-..+. ...++.+..+||.+||. ||.+|. .++||-+
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~--~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE--EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC--cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 999999999999988766554433322111111111 12344899999999999 999995 4666654
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=346.36 Aligned_cols=243 Identities=18% Similarity=0.255 Sum_probs=213.5
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+++-.-||.|+.|.|-+|+ ..+|+.+|||++.+.. ......+.+|+-+|+.+.||||+++|+++.+..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 356666778999999999999 5679999999997642 112456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||++||-|++++. ..+++++.+..+++.||+.|+.|+|..+ |+||||||+|+|||..+++||+|||+|.....+
T Consensus 92 Eyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklL 168 (786)
T KOG0588|consen 92 EYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLL 168 (786)
T ss_pred EecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCccc
Confidence 9999999999998 5678999999999999999999999999 999999999999999999999999999876554
Q ss_pred CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
.+.+|++.|.+||++.|.+| +.++||||.|||||.|+||+.||..+....+......... +.|..++.++++|
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------~MPs~Is~eaQdL 242 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------EMPSNISSEAQDL 242 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------cCCCcCCHHHHHH
Confidence 46799999999999999997 5699999999999999999999998766555443333222 3466788999999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||..||.+|.|+++|++
T Consensus 243 Lr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 243 LRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred HHHHhccCccccccHHHHhh
Confidence 99999999999999999998
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-43 Score=366.73 Aligned_cols=424 Identities=18% Similarity=0.168 Sum_probs=284.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+++++.||+|+||.||+|... +|+.||||++....... .++|.+|++++++++||||+++++++..++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 45677788899999999999954 58999999997543222 457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 136 EYMPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999886311 134567788999999999999999999 999999999999999999999999998
Q ss_pred ccCCC----------------------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh
Q 011092 207 KNSRD----------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 264 (494)
Q Consensus 207 ~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~ 264 (494)
+.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 75411 01235899999999999889999999999999999999999988653322111
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCC-ChHHHHHHhccccccCCC-------Cccc----------
Q 011092 265 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-NPKSLVTALSPLQKETEV-------PSHV---------- 326 (494)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~vl~~L~~~~~~~~~-------~~~~---------- 326 (494)
.. .....+. ........+..+.+++.+||+.||++|| +++++++.|+.+...... +...
T Consensus 241 ~~--~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~i 317 (932)
T PRK13184 241 YR--DVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPI 317 (932)
T ss_pred hh--hhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchh
Confidence 11 0111110 0011124567899999999999999995 677777777655332110 0000
Q ss_pred -----cc-CCCCCC-----------------------------CCCCCCCCcccccccchh----------------HH-
Q 011092 327 -----LM-GIPHSA-----------------------------SVSPLSPLGEACSRRDLT----------------AI- 354 (494)
Q Consensus 327 -----~~-~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~----------------~~- 354 (494)
.. ..+.+. ...-..|+.+...+.++. .+
T Consensus 318 Llsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 397 (932)
T PRK13184 318 LLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLV 397 (932)
T ss_pred hhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeee
Confidence 00 000000 000001111111111100 00
Q ss_pred HHHHHhhcccCccchhhhhhhhhhhhHH-------------------------------HHHH-----------------
Q 011092 355 HEILEKISYKDDEGVANELSFQMWTDQM-------------------------------QETL----------------- 386 (494)
Q Consensus 355 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~----------------- 386 (494)
...++-.. ...........|....++. +|+.
T Consensus 398 ~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (932)
T PRK13184 398 KNGLEIQK-KSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRV 476 (932)
T ss_pred cccceeec-CCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceee
Confidence 00000000 0000001111111100000 1111
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhHHHHHHHhc----C---ChHHHHHHHHHHHhhCCcchHHH
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMS----D---MPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~----~---~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
.-.....+....+.|++|+..|.+.-..-|.. ..++.+..|.++... | .+++|+.-|++. .-.|.-|--|
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 555 (932)
T PRK13184 477 SCLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYL-HGGVGAPLEY 555 (932)
T ss_pred ecccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHh-cCCCCCchHH
Confidence 11223456778899999999999998888761 346777777777653 2 356666666653 4457777889
Q ss_pred HHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 458 YLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 458 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
..+|.+|..+|+|+|-+++|..|++.-|...+
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (932)
T PRK13184 556 LGKALVYQRLGEYNEEIKSLLLALKRYSQHPE 587 (932)
T ss_pred HhHHHHHHHhhhHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999998776543
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=338.54 Aligned_cols=242 Identities=18% Similarity=0.281 Sum_probs=204.2
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+..+..||+|+||.||+|. ..+++.||+|++...... ..+.+.+|+.+|.+++++||.++|+.+..+..+|++||||.
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~ 94 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG 94 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence 4445677999999999999 556899999999865544 36788999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
||++.+.+. .+..+.+..+.-|+++++.||.|||.++ .+|||||+.|||+..+|.+||+|||.+...... .++
T Consensus 95 gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 95 GGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred Ccchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 999999996 3445588888899999999999999999 999999999999999999999999998765432 578
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.||+.|||||++.+..|+.|+||||||++.+||++|.+|+..... .....+.....++......++.+.+|+..|
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~kEFV~~C 246 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFKEFVEAC 246 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHHHHHHHH
Confidence 999999999999988899999999999999999999977643211 111112222223333446678899999999
Q ss_pred ccCCCCCCCChHHHHH
Q 011092 296 LQYEPRERPNPKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~ 311 (494)
|.+||+.|||+.++++
T Consensus 247 L~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 247 LDKNPEFRPSAKELLK 262 (467)
T ss_pred hhcCcccCcCHHHHhh
Confidence 9999999999999985
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=345.59 Aligned_cols=255 Identities=24% Similarity=0.364 Sum_probs=211.6
Q ss_pred ccccccCCCCCCCeEEEEEEcC--C---CEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKLEN--Q---RRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
..+.+.||+|+||.||+|.+.. + ..||||..+... .....+|++|++++++++|||||+++|++.....+++
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML 238 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE
Confidence 3445788999999999999532 2 238999998532 2236789999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
|||+|+||+|.++|.+. ...++..++..++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+|||+++....-.
T Consensus 239 vmEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~ 316 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV 316 (474)
T ss_pred EEEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCccee
Confidence 99999999999999853 236999999999999999999999999 9999999999999999999999999987654211
Q ss_pred ----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 214 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 214 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
...-...|+|||.+..+.+++++|||||||++||+++ |..|+++.....++...... ......+...+.++
T Consensus 317 ~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~----~~r~~~~~~~p~~~ 392 (474)
T KOG0194|consen 317 MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN----GYRMPIPSKTPKEL 392 (474)
T ss_pred eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc----CccCCCCCCCHHHH
Confidence 1124589999999999999999999999999999999 77788776555444333111 11223344667899
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhccccccCCC
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~ 322 (494)
..++.+||..+|++||||.++.+.|+.+......
T Consensus 393 ~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 393 AKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999988776554
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-43 Score=336.10 Aligned_cols=246 Identities=16% Similarity=0.229 Sum_probs=200.2
Q ss_pred cccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 63 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+++.||+|+||.||++. ..+|+.||+|.+..... .....+.+|+.++.+++|+||+.+++++..++..++||||+
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence 345666999999999999 45799999999865332 12346789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Ccc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSY 215 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 215 (494)
++|+|.+++.......+++..+..++.|++.||.|||+++ |+||||||+|||+++++.++|+|||++...... ...
T Consensus 83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05631 83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR 161 (285)
T ss_pred CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence 9999998886544457999999999999999999999999 999999999999999999999999998765432 234
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.||..|+|||++.+..++.++|||||||++|+|++|+.||...............+.. ....++...+..+.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~~ 239 (285)
T cd05631 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRML 239 (285)
T ss_pred CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHHH
Confidence 6899999999999889999999999999999999999998653221111111111111 11223445678899999999
Q ss_pred ccCCCCCCCC-----hHHHHH
Q 011092 296 LQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rps-----~~~vl~ 311 (494)
|+.||.+||+ ++++++
T Consensus 240 l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 240 LTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred hhcCHHHhcCCCCCCHHHHhc
Confidence 9999999997 777775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=337.61 Aligned_cols=242 Identities=18% Similarity=0.192 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+++++.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 3566778899999999999954 689999999965321 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Ccc
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 215 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 215 (494)
|+++++|.+++.. .+.+++.....++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 9999999999863 457899999999999999999999999 999999999999999999999999998765433 345
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||.......+....... ...++...+..+.+++.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHH
Confidence 6899999999999888999999999999999999999998765433222221111 1123444567899999999
Q ss_pred ccCCCCCCCC-----hHHHHH
Q 011092 296 LQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rps-----~~~vl~ 311 (494)
|+.||.+||+ +.+++.
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred cCCCHHHccCCccCCHHHHhc
Confidence 9999999995 888875
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=342.00 Aligned_cols=236 Identities=20% Similarity=0.243 Sum_probs=198.8
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||++.. .+|+.||||+++.... .....+.+|+.++.+++||||+++++++..++..++||||++|++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 469999999999995 5689999999975321 224567889999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCccccC
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTN 218 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 218 (494)
|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 999886 3467899999999999999999999999 99999999999999999999999999875322 2345689
Q ss_pred CCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC
Q 011092 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298 (494)
Q Consensus 219 ~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 298 (494)
+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999888999999999999999999999998765433322221111 1123455678899999999999
Q ss_pred CCCCCC-----ChHHHHH
Q 011092 299 EPRERP-----NPKSLVT 311 (494)
Q Consensus 299 dp~~Rp-----s~~~vl~ 311 (494)
||.+|| ++.++++
T Consensus 233 dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 233 DPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CHHHcCCCCCCCHHHHHc
Confidence 999999 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=342.36 Aligned_cols=244 Identities=17% Similarity=0.192 Sum_probs=203.7
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+.++++++.||.|+||.||+|... +++.||||++.... ....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 456778888899999999999954 58999999996532 12345788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-C
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 213 (494)
|||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 999999999999873 456899999999999999999999999 999999999999999999999999998865443 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... . ..++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~----~--~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG----R--LKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC----C--cCCCCCCCHHHHHHHH
Confidence 457899999999999888999999999999999999999998654332222211111 1 1233445678999999
Q ss_pred HHccCCCCCCCC-----hHHHHH
Q 011092 294 RCLQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps-----~~~vl~ 311 (494)
+||+.||.+||+ +.+++.
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhc
Confidence 999999999986 577765
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-43 Score=337.21 Aligned_cols=247 Identities=18% Similarity=0.202 Sum_probs=215.9
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCc-cceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-RLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-~~lv~ 135 (494)
+.|..++.+|+|+||.+++.++ .++..|++|.+....... ++...+|+.++++++|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 4677888999999999999994 458899999997654333 4467899999999999999999999999888 99999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
+||+||+|.+.+...++..++++.+..|+.|++.|+.|||++. |+|||||+.||+++.++.+||+|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 9999999999998777778999999999999999999999887 999999999999999999999999999987654
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
.+..||+.||+||.+.+.+|..|+|||||||++|||++-+++|.......+.......... ..|...+.++..+
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-----Plp~~ys~el~~l 237 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-----PLPSMYSSELRSL 237 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-----CCCccccHHHHHH
Confidence 3578999999999999999999999999999999999999998776555444444333322 2355667899999
Q ss_pred HHHHccCCCCCCCChHHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~~ 312 (494)
+..||..+|..||++.+++..
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999975
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=337.95 Aligned_cols=237 Identities=20% Similarity=0.212 Sum_probs=196.7
Q ss_pred CCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 68 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 68 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
||+|+||.||++... +++.||+|.++... ......+.+|+.++.+++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 599999999999954 58899999996532 22356788999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCccccCC
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNL 219 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t~ 219 (494)
.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||+
T Consensus 81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQR--EGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 999863 456999999999999999999999999 99999999999999999999999999875322 22356899
Q ss_pred CcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCC
Q 011092 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299 (494)
Q Consensus 220 ~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (494)
.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+..+.+++.+||+.|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCC
Confidence 999999999888999999999999999999999998765443332222111 11234556688999999999999
Q ss_pred CCCCCChHHHHHHh
Q 011092 300 PRERPNPKSLVTAL 313 (494)
Q Consensus 300 p~~Rps~~~vl~~L 313 (494)
|.+||++..+.+.|
T Consensus 232 p~~R~~~~~~~e~l 245 (312)
T cd05585 232 PTRRLGYNGAQEIK 245 (312)
T ss_pred HHHcCCCCCHHHHH
Confidence 99998654443333
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=337.36 Aligned_cols=251 Identities=19% Similarity=0.227 Sum_probs=202.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.++++++.||+|+||.||++... +|..||+|.+...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 45677888899999999999954 5889999999764322 245789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--Ccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 215 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 215 (494)
+++++|.+++.. ...+++..+..++.|++.||.|||+++.|+||||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 999999999963 4568999999999999999999998633999999999999999999999999998755332 345
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc-------------------------
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------- 270 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~------------------------- 270 (494)
.++..|+|||++.+..++.++|||||||++|||+||+.||.......+.......
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 6899999999999888999999999999999999999998643222111000000
Q ss_pred -----------------cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 271 -----------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 271 -----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
+.............+.++.+|+.+||+.||++|||+.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000001112356789999999999999999999999873
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=303.64 Aligned_cols=255 Identities=22% Similarity=0.285 Sum_probs=215.9
Q ss_pred CCCCccccCHHHHHHHhcCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCC
Q 011092 40 GLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRN 115 (494)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h 115 (494)
+.+..+.+++++ | ++-+.||+|-||.||.|+ .+++-.||+|++.+... .-..++.+|++|-+.|+|
T Consensus 12 ~~~~~~~~~l~d-------f---eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~h 81 (281)
T KOG0580|consen 12 GSRATKTWTLDD-------F---EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRH 81 (281)
T ss_pred ccccccccchhh-------c---cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCC
Confidence 344445666654 3 344566999999999999 56788999999965432 225678999999999999
Q ss_pred CCCccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 116 pnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
|||.++|++|.+....||++||.++|+|...|.......+++.....++.|++.||.|+|.++ +|||||||+|+|++..
T Consensus 82 pnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~ 160 (281)
T KOG0580|consen 82 PNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSA 160 (281)
T ss_pred ccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCC
Confidence 999999999999999999999999999999998766778999999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCC--CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccc
Q 011092 196 GNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 273 (494)
+.+||+|||-+...+. ..+.+||..|.+||...+...+...|+|++|++.||++.|.+||...............
T Consensus 161 ~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~--- 237 (281)
T KOG0580|consen 161 GELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV--- 237 (281)
T ss_pred CCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc---
Confidence 9999999998876543 35789999999999999999999999999999999999999999776544333322211
Q ss_pred ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+|..++..+.++|.+|+.++|.+|.+..+++.
T Consensus 238 ---~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 238 ---DLKFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ---cccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 12345667789999999999999999999999886
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=341.18 Aligned_cols=239 Identities=20% Similarity=0.310 Sum_probs=206.8
Q ss_pred CCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
+..+.++++.||+|+||.|+++.. .+++.+|||++++... .+.+..+.|..|+... +||.+++++..|.+.+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 344567888889999999999995 4588999999988643 3467788899999888 6999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC--
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 210 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-- 210 (494)
+||||+.||++..+. ....+++....-++..|+.||.|||++| |||||||.+|||||.+|.+||+|||+++...
T Consensus 446 fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCC
Confidence 999999999954433 4577999999999999999999999999 9999999999999999999999999998643
Q ss_pred --CCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 211 --DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 211 --~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
...+++||+.|||||++.+..|+.++|+|||||+||||+.|..||+++..+.+-...... ...+|..++.+.
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~~~yP~~ls~ea 595 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSKEA 595 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CCCCCCcccHHH
Confidence 346889999999999999999999999999999999999999999987666555443322 124577788999
Q ss_pred HHHHHHHccCCCCCCCCh
Q 011092 289 VRLASRCLQYEPRERPNP 306 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~ 306 (494)
.+|++++|..+|++|.-+
T Consensus 596 ~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 596 IAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHhccCcccccCC
Confidence 999999999999999644
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=351.98 Aligned_cols=336 Identities=21% Similarity=0.253 Sum_probs=251.4
Q ss_pred ccCHHHHHHHhcCCc------cccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCCC-ChHHHHHHHHHHhccC
Q 011092 46 EFTLEQLKNATSGFA------VENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR 114 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~------~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~ 114 (494)
.+++++--++.+.|. ...+-+.||.|.||.|++|+++- ...||||.++..... .+..|+.|+.||.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 356666666666664 23455677999999999999643 357999999976543 3678999999999999
Q ss_pred CCCCccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC
Q 011092 115 NNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194 (494)
Q Consensus 115 hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~ 194 (494)
||||++|.|+.......+||+|||++|+|+.+|+... +.|++.++..++++|+.||.||-+.+ +|||||-..|||++.
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNS 766 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeecc
Confidence 9999999999999999999999999999999998754 55999999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCcccCCCCCc-cc----c--CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhc
Q 011092 195 DGNPRLSTFGLMKNSRDGKS-YS----T--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDR 266 (494)
Q Consensus 195 ~~~~kl~Dfgla~~~~~~~~-~~----~--t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~ 266 (494)
+...|++|||+++...+... .. | .++|.|||.+...++|.+|||||||||+||.++ |..|++...-..+-..
T Consensus 767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka 846 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 846 (996)
T ss_pred ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH
Confidence 99999999999997765431 11 1 378999999999999999999999999999877 7778765433222211
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCc--c
Q 011092 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLG--E 344 (494)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 344 (494)
. .....-..|.++|..|.+|+..||++|-.+||.+.+|+..|+++.+.+..-. ...+.. ..+..++. .
T Consensus 847 I-----e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk----~~~~~~-~r~s~~lld~~ 916 (996)
T KOG0196|consen 847 I-----EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLK----TIAPES-PRPSQPLLDRS 916 (996)
T ss_pred H-----HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhc----ccCCCC-CCCcccccCCC
Confidence 1 1111222366788999999999999999999999999999999877642111 011111 11112221 2
Q ss_pred cccccchhHHHHHHHhhcccCc---cchhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 011092 345 ACSRRDLTAIHEILEKISYKDD---EGVANELSFQMWTDQMQETLNSKKKGDVA 395 (494)
Q Consensus 345 ~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 395 (494)
...-..+.++.++|+.++-... -..+.-.+++.... ..++.+...|..+
T Consensus 917 ~~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q--~s~eDl~~~Gitl 968 (996)
T KOG0196|consen 917 GSDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQ--MSAEDLLRLGITL 968 (996)
T ss_pred CCCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHh--hhHHHHHhhceee
Confidence 2344566788899988873333 33333444444332 2345556666664
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=361.43 Aligned_cols=254 Identities=24% Similarity=0.378 Sum_probs=207.6
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CC----EEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN--QR----RIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
...+...||+|.||.||.|...+ |. .||||.+++... +....|++|..+|+.++|||||+++|+|.+....+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34556788999999999999644 43 499999987643 346789999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 134 VAEYMPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
++|||.||+|..+|++.. ...++....+.++.+|++|+.||++++ +|||||..+|+||+....+||+|||+|+.
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHh
Confidence 999999999999998632 356889999999999999999999998 99999999999999999999999999995
Q ss_pred CCCCCcc------ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCC-CCCCCchhHHhhhccccccccccccCCCC
Q 011092 209 SRDGKSY------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 209 ~~~~~~~------~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
......+ .-...|||||.+..+.+|.|+|||||||+|||++|.. .|++......+... ..... .-..|
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~----~~~gg-RL~~P 926 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD----VLEGG-RLDPP 926 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH----HHhCC-ccCCC
Confidence 4332211 2247899999999999999999999999999999955 45554322211110 00011 22346
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
..+|+.++++|..||+.+|++||++..+++.+..+....
T Consensus 927 ~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 927 SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 677889999999999999999999999999888776543
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=332.45 Aligned_cols=253 Identities=21% Similarity=0.273 Sum_probs=197.4
Q ss_pred cccccccCCCCCCCeEEEEEEcC-----------------CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEE
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-----------------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLL 122 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~ 122 (494)
.+.+.+.||+|+||.||+|.+.+ +..||+|.+...... ....|.+|+.++.+++||||++++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 45667788999999999997532 347999999764322 245799999999999999999999
Q ss_pred EEEecCCccceeeecCCCCCHHHHhcccC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q 011092 123 GCCCEGDERLLVAEYMPNETLAKHLFHWE-----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185 (494)
Q Consensus 123 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dl 185 (494)
+++...+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dl 164 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDL 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCc
Confidence 99999999999999999999999885321 124678899999999999999999999 999999
Q ss_pred cccceeecCCCCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCC--CCCCC
Q 011092 186 NAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK--HIPPS 257 (494)
Q Consensus 186 kp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~--~p~~~ 257 (494)
||+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++||||||+++|||+++. .|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 9999999999999999999987543321 233467899999998888999999999999999999753 44443
Q ss_pred chhHHhhhccccccc--cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 258 HALDLIRDRNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
............... ........+..++..+.+|+.+||+.||.+|||+.+|.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 245 LTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 222111111000000 000111123455678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=336.62 Aligned_cols=237 Identities=19% Similarity=0.239 Sum_probs=198.5
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||++.. .+|+.||+|++.... ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 469999999999995 468999999997542 2234578899999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCccccC
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTN 218 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 218 (494)
|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 9988863 457999999999999999999999999 99999999999999999999999999875322 1235689
Q ss_pred CCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC
Q 011092 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298 (494)
Q Consensus 219 ~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 298 (494)
+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999998654433222211111 1123455668899999999999
Q ss_pred CCCCCC-----ChHHHHHH
Q 011092 299 EPRERP-----NPKSLVTA 312 (494)
Q Consensus 299 dp~~Rp-----s~~~vl~~ 312 (494)
||.+|| ++.++++.
T Consensus 233 dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CHHHcCCCCCCCHHHHhcC
Confidence 999997 78888863
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=321.49 Aligned_cols=244 Identities=17% Similarity=0.237 Sum_probs=209.9
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCCh---HHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.|++...||+|.||.|-+|. +..|+.||||.++++...+. -.+.+|++||+.|+||||+.+|.+|+..+.+.||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 57778888999999999999 67899999999988765553 457899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---C
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---K 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 213 (494)
|..+|.|.+++. ..+.+++.+...+++||..|+.|+|.++ ++|||||.+|||+|.++++||+|||++-.+.+. .
T Consensus 134 YaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLq 210 (668)
T KOG0611|consen 134 YASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQ 210 (668)
T ss_pred ecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHH
Confidence 999999999998 4567999999999999999999999998 999999999999999999999999999877665 4
Q ss_pred ccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
+++|++.|.+||.+.|.+| ++..|.|||||+||.|+.|..||.+.....+-.+.... .. ..+.-+....-||
T Consensus 211 TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G----aY---rEP~~PSdA~gLI 283 (668)
T KOG0611|consen 211 TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG----AY---REPETPSDASGLI 283 (668)
T ss_pred HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc----cc---cCCCCCchHHHHH
Confidence 7899999999999999987 67999999999999999999999876443322211111 00 0112235688899
Q ss_pred HHHccCCCCCCCChHHHHHHhc
Q 011092 293 SRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
++||..+|++|.|..+|...-+
T Consensus 284 RwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 284 RWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHHhcCcccchhHHHHhhhhe
Confidence 9999999999999999987543
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=325.66 Aligned_cols=250 Identities=18% Similarity=0.189 Sum_probs=202.3
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--------------ChHHHHHHHHHHhccCCCCCccEEEE
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--------------DPRQFLEEARSVGQLRNNRLTNLLGC 124 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~hpnIv~l~~~ 124 (494)
..|+++..||+|.||.|-+|+ ..+++.||||++.+.... ..+...+||.+|++|+|||||+|+.+
T Consensus 97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv 176 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV 176 (576)
T ss_pred hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence 457788999999999999999 456899999999643211 13578899999999999999999999
Q ss_pred EecC--CccceeeecCCCCCHHHHhcccCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEc
Q 011092 125 CCEG--DERLLVAEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201 (494)
Q Consensus 125 ~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~ 201 (494)
..+. +.+|||+|||..|.+...= ..++ +++.+.++++.+++.||+|||.+| ||||||||+|+||+++|++||+
T Consensus 177 LDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 177 LDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred ecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEee
Confidence 8764 5799999999988875422 3345 999999999999999999999999 9999999999999999999999
Q ss_pred ccCCcccCCCC---------CccccCCCcCCCcCCCCCC----CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc
Q 011092 202 TFGLMKNSRDG---------KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 202 Dfgla~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~ 268 (494)
|||.+.....+ ....||+.|+|||.+.++. .+.+.||||+||+||.|+.|+.||.+.....+.....
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIv 332 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIV 332 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHh
Confidence 99987754221 2357999999999998743 4678999999999999999999998876554444433
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.... .-....++.+.+.+||.++|.+||+.|.+..+|........
T Consensus 333 n~pL----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 333 NDPL----EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred cCcc----cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 3221 11112245689999999999999999999999987654433
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-42 Score=325.12 Aligned_cols=249 Identities=20% Similarity=0.278 Sum_probs=202.2
Q ss_pred cccccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.+++.+.||+|+||.||+|.+. .+..||+|.++...... ...|.+|+.++.+++||||+++++++..++..++||
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 85 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT 85 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEE
Confidence 4566677899999999999843 35689999997653222 457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 213 (494)
||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ ++||||||+|||++.++.++++|||.+.......
T Consensus 86 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 86 EYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred EeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 999999999998642 357899999999999999999999999 9999999999999999999999999866432221
Q ss_pred ---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 214 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
...++..|+|||.+.+..++.++||||||+++||+++ |..||................ ....+..++..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 238 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-----RLPAPRNCPNLLH 238 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-----CCCCCCCCCHHHH
Confidence 2234578999999998899999999999999999775 888876543322211111110 1122445667899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+++.+||+.+|.+|||+.++++.|..+
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-43 Score=320.92 Aligned_cols=243 Identities=20% Similarity=0.326 Sum_probs=197.9
Q ss_pred ccccCCCCCCCeEEEEE-EcCCCEEEEEEec--CCCCCChHHHHHHHHHHhccCCCCCccEEEEEec-----CCccceee
Q 011092 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-----GDERLLVA 135 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~~~~lv~ 135 (494)
.++.||.|+||.|..+. ..+|..||||++. .......++..+|+.+|+.++|+||+.+++++.. -+..|+|+
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 36788999999999999 5679999999997 3444457889999999999999999999999876 24589999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 211 (494)
|+|+ .+|...++ .++.++.+....+++|+++||.|+|+.+ |+||||||+|+|++.+..+||+|||+|+....
T Consensus 106 elMe-tDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~ 181 (359)
T KOG0660|consen 106 ELME-TDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED 181 (359)
T ss_pred hHHh-hHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence 9994 89999996 3455999999999999999999999999 99999999999999999999999999998742
Q ss_pred --CCccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-------------------Hhhhc---
Q 011092 212 --GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------------------LIRDR--- 266 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-------------------~~~~~--- 266 (494)
...+..|..|.|||.+.. ..||.+.||||.|||+.||++|++.|++...- .+...
T Consensus 182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar 261 (359)
T KOG0660|consen 182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR 261 (359)
T ss_pred cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence 134567899999998854 56999999999999999999999988765211 01100
Q ss_pred -ccc---ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 267 -NLQ---MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 267 -~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+. ..+...+...+ +..++...+|+.+||..||.+|+|++++++
T Consensus 262 ~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 262 PYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 00111111112 256688999999999999999999999997
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=343.60 Aligned_cols=251 Identities=22% Similarity=0.335 Sum_probs=200.7
Q ss_pred cccccccCCCCCCCeEEEEEE-c-----CCCEEEEEEecCCCCCC-hHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-E-----NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
++++.+.||+|+||.||+|.. . ++..||||+++...... ...+.+|+.+++.+ +|||||+++++|...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 455677789999999999883 1 23579999997643222 45688999999999 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccC-------------------------------------------------------------
Q 011092 133 LVAEYMPNETLAKHLFHWE------------------------------------------------------------- 151 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 151 (494)
+||||+++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999885311
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC------ccccC
Q 011092 152 -------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTN 218 (494)
Q Consensus 152 -------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t 218 (494)
..++++..+++|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 135788899999999999999999999 9999999999999999999999999987643322 12345
Q ss_pred CCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 219 ~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
+.|+|||++.+..++.++|||||||++|+|++ |+.||+........... .........+...+.++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM----VKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH----HHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999988889999999999999999997 98887653221111000 01111112233446789999999999
Q ss_pred CCCCCCCChHHHHHHhccc
Q 011092 298 YEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 298 ~dp~~Rps~~~vl~~L~~~ 316 (494)
.||.+|||+.++++.|+.+
T Consensus 354 ~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CChhhCcCHHHHHHHHHHH
Confidence 9999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=322.79 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=208.0
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+.+++++.||+|++|.||+|...++..||+|.+.... ...+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 4577888999999999999998778899999987543 235789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 214 (494)
+++|.+++.......+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence 999999997545567899999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..|+|||++.+..++.++||||||+++|+|+| |..||................. .......+..+.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~ 238 (261)
T cd05072 164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-----MPRMENCPDELYDIMK 238 (261)
T ss_pred CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCCHHHHHHHH
Confidence 234568999999988889999999999999999998 8888765433222221111111 1122345678999999
Q ss_pred HHccCCCCCCCChHHHHHHhccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+||..+|++|||+.++.+.|+.+
T Consensus 239 ~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 239 TCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHccCCcccCcCHHHHHHHHhcC
Confidence 99999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=338.77 Aligned_cols=244 Identities=17% Similarity=0.214 Sum_probs=203.1
Q ss_pred CccccccccCCCCCCCeEEEEEEcC--CCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+..+.+++.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.++..++||||+++++++..++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4457778888999999999998433 3689999986432 2235678899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-C
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-G 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~ 212 (494)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 109 v~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 9999999999999973 457999999999999999999999999 99999999999999999999999999876543 2
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+..+.+++
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~li 259 (340)
T PTZ00426 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKHLM 259 (340)
T ss_pred ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHHH
Confidence 34578999999999998889999999999999999999999987654332222211111 123444567899999
Q ss_pred HHHccCCCCCCC-----ChHHHHH
Q 011092 293 SRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
.+||+.||.+|+ +++++++
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHc
Confidence 999999999995 7888876
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=342.14 Aligned_cols=250 Identities=21% Similarity=0.314 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
++++.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++..+ +||||++++++|..++..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 355667789999999999973 2356899999975432 2345788999999999 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccC-------------------------------------------------------------
Q 011092 133 LVAEYMPNETLAKHLFHWE------------------------------------------------------------- 151 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 151 (494)
+||||++||+|.+++....
T Consensus 116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (375)
T cd05104 116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI 195 (375)
T ss_pred eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence 9999999999999886321
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC------
Q 011092 152 ------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------ 213 (494)
Q Consensus 152 ------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------ 213 (494)
...+++..+..|+.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 274 (375)
T cd05104 196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274 (375)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence 124788899999999999999999999 9999999999999999999999999987654322
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...++..|+|||++.+..++.++||||||+++|||++ |..||.............. .......+...+.++.+|+
T Consensus 275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li 350 (375)
T cd05104 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK----EGYRMLSPECAPSEMYDIM 350 (375)
T ss_pred CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH----hCccCCCCCCCCHHHHHHH
Confidence 1234567999999998899999999999999999998 7767654321110000000 0011112233457899999
Q ss_pred HHHccCCCCCCCChHHHHHHhcc
Q 011092 293 SRCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
.+||+.||++|||+.++++.|+.
T Consensus 351 ~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 351 KSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHccCChhHCcCHHHHHHHHHh
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=337.33 Aligned_cols=249 Identities=17% Similarity=0.186 Sum_probs=203.8
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.+++.||.|+||.||+|... +++.||||+++... ......+..|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 4567788899999999999964 58999999997532 1234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-CCcc
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GKSY 215 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~~~~ 215 (494)
|++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... ....
T Consensus 82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999999996 3457899999999999999999999999 99999999999999999999999999876543 2345
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--cccccccccCCCCchhHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--QMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
.||+.|+|||++.+..++.++|||||||++|||++|..||............. ................+.++.+++.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 78999999999998899999999999999999999999987543322211110 0000000000011245678999999
Q ss_pred HHccCCCCCCCChHHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~ 312 (494)
+||..+|.+||++.+++..
T Consensus 239 ~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhhChhhhcCCHHHHHhC
Confidence 9999999999999999874
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=335.90 Aligned_cols=236 Identities=20% Similarity=0.251 Sum_probs=196.9
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||++.. .+|..||+|+++... ......+.+|+.++..++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 469999999999994 568999999997532 1234567889999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCccccC
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTN 218 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 218 (494)
|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....||
T Consensus 82 L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 9988863 457899999999999999999999999 99999999999999999999999999875322 1235689
Q ss_pred CCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC
Q 011092 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298 (494)
Q Consensus 219 ~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 298 (494)
+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999888999999999999999999999998654333222211111 1123445668899999999999
Q ss_pred CCCCCC-----ChHHHHH
Q 011092 299 EPRERP-----NPKSLVT 311 (494)
Q Consensus 299 dp~~Rp-----s~~~vl~ 311 (494)
||.+|| ++.++++
T Consensus 233 dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 233 DPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CHHHhCCCCCCCHHHHHc
Confidence 999998 7888876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=319.49 Aligned_cols=246 Identities=22% Similarity=0.338 Sum_probs=201.9
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++++++.||+|+||.||++...++..+|+|.+.... .....|..|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4566778889999999999998777899999986543 235678999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 214 (494)
+|+|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++...... .
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 83 NGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 99999998642 246899999999999999999999999 9999999999999999999999999887543321 1
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..|+|||++.+..++.++||||||+++|+|++ |+.|+................ ....+...+..+.+++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~li~ 235 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-----RLYRPKLASMTVYEVMY 235 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHHHHHHHH
Confidence 234568999999988889999999999999999999 787775443222211111110 01112334578999999
Q ss_pred HHccCCCCCCCChHHHHHHh
Q 011092 294 RCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L 313 (494)
+||+.+|.+|||+.++++.|
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHccCCcccCcCHHHHHHhh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=320.12 Aligned_cols=240 Identities=25% Similarity=0.334 Sum_probs=191.9
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccceeeecCC
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLLVAEYMP 139 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~lv~e~~~ 139 (494)
+.+|.|+||+||+|+. .++..||||++..+. +.-.+|+++|+.++|||||++.-+|.... ...+||||+|
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 4459999999999994 457999999986543 23358999999999999999998886532 3469999998
Q ss_pred CCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCCCC---C
Q 011092 140 NETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---K 213 (494)
Q Consensus 140 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~---~ 213 (494)
.+|.+.+++. .+..++.-.+.-++.||.+||.|||+.+ |+||||||.|+|+|.+ |.+||||||-|+....+ .
T Consensus 106 -~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni 183 (364)
T KOG0658|consen 106 -ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI 183 (364)
T ss_pred -HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce
Confidence 8999999742 2466888888999999999999999999 9999999999999955 99999999999876543 4
Q ss_pred ccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHH----------------hhhcc-------cc
Q 011092 214 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------------IRDRN-------LQ 269 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~----------------~~~~~-------~~ 269 (494)
++..|..|+|||.+.|.. ||.+.||||.|||+.||+-|++.|+++.... +.... ..
T Consensus 184 SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p 263 (364)
T KOG0658|consen 184 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFP 263 (364)
T ss_pred eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCc
Confidence 567789999999998865 9999999999999999999999998753211 11100 11
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+....+........++++.+|+.++|..+|.+|.++.+++.
T Consensus 264 ~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 264 QIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111111111234456789999999999999999999999985
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=320.96 Aligned_cols=249 Identities=21% Similarity=0.335 Sum_probs=206.5
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
++.+.+.||.|++|.||+|.. ++++.||+|.+.... .....+.+|+++++.++||||+++++++...+..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 345667789999999999995 458899999987543 345679999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 214 (494)
+++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||++++++.+||+|||++....... .
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~ 164 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence 999999987544556899999999999999999999999 9999999999999999999999999987654322 1
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...++.|+|||.+.+..++.++||||||+++|||++ |..|++............. ......+...+..+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~ 239 (263)
T cd05052 165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----GYRMERPEGCPPKVYELMR 239 (263)
T ss_pred CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCHHHHHHHH
Confidence 223567999999998889999999999999999998 8878765443322221111 1112334456689999999
Q ss_pred HHccCCCCCCCChHHHHHHhccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+||+.+|++|||+.++++.|+.+
T Consensus 240 ~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 240 ACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=325.33 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=204.5
Q ss_pred ccccccccCCCCCCCeEEEEEEcC-C-----CEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN-Q-----RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
.++++++.||+|+||.||+|.... + ..|++|.++..... ....|.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 356677888999999999998533 2 57999998754322 2456899999999999999999999999988999
Q ss_pred eeeecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCe
Q 011092 133 LVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 198 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~ 198 (494)
++|||+++++|.+++..... ..+++..++.++.|++.||.|||+++ ++|+||||+||++++++.+
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcE
Confidence 99999999999999864311 45888999999999999999999999 9999999999999999999
Q ss_pred EEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccc
Q 011092 199 RLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 271 (494)
Q Consensus 199 kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 271 (494)
+|+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.......+.......
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~- 242 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR- 242 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence 99999998754322 12345678999999988889999999999999999998 88887654332222211111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 272 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
.....+...+.++.+|+.+||+.||.+||++.+|++.|+.+
T Consensus 243 ----~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 243 ----QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ----CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11123456678999999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=321.27 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
++.+++.||.|+||.||+|...++..|++|.+..........+..|+.+++.++||||+++++++...+..++||||+++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 45667788999999999999877899999999876655567899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----ccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYS 216 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~~ 216 (494)
++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++....... ...
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 99999997655567899999999999999999999999 9999999999999999999999999987654321 223
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
++..|++||.+.+..++.++||||||+++++|++ |+.|+............... .....+...+..+.+++.+|
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~ 240 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-----YRMPCPAKCPQEIYKIMLEC 240 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-----CcCCCCCCCCHHHHHHHHHH
Confidence 4578999999988889999999999999999998 77777554322221111111 11122345568899999999
Q ss_pred ccCCCCCCCChHHHHHHhccc
Q 011092 296 LQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~ 316 (494)
|+.||.+|||+.++++.|+.+
T Consensus 241 l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 241 WAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=335.44 Aligned_cols=245 Identities=17% Similarity=0.181 Sum_probs=195.3
Q ss_pred CCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
++.+++.++.||.|+||.||+|.. .+++.||||++...... ....+.+|+++++.++|+||+++++++..++..++||
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 355667778899999999999995 46899999999654322 2457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||+++++|.+.. ..++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999999986532 3567788899999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCCCcCCCcCCCC-----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 213 -KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+...... .. .......+...+.
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 302 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA-IC-MSQPPEAPATASR 302 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH-Hh-ccCCCCCCCccCH
Confidence 34568999999998753 2245689999999999999999999863221111100000 00 0011123345667
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||.+||+.||++|||+.++++
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999999999997
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=326.71 Aligned_cols=250 Identities=19% Similarity=0.263 Sum_probs=198.2
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
...|.+++.||.|+||.||+|... ++..||+|.++.... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 456778889999999999999954 689999999975432 234567899999999999999999999999889999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 84 YLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CCC-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 998 589988854 2345889999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------cc---------
Q 011092 213 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------ML--------- 271 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-----------~~--------- 271 (494)
....+++.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. .+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 23456889999999875 4588999999999999999999998865432211110000 00
Q ss_pred cccccc----CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 TDSCLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+... .......+.++.+++.+||+.||.+|||++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0011234578899999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=348.67 Aligned_cols=246 Identities=17% Similarity=0.202 Sum_probs=203.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cC-CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-EN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..+.+.+.||+|++|.||+|.. .+ +..||+|.+..........+.+|+.+++.++|||||++++++..++..||||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3477788889999999999984 34 678999987554433345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 138 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
++||+|.+++... ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999887532 2456899999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......+......... ...+..++..+.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-----DPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCccCCHHHH
Confidence 234689999999999988899999999999999999999999865443322222111111 112334567899
Q ss_pred HHHHHHccCCCCCCCChHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+++.+||+.||..||++.+++.
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHh
Confidence 9999999999999999999875
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=326.23 Aligned_cols=248 Identities=18% Similarity=0.236 Sum_probs=197.4
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.+++++.||+|+||.||+++.. ++..||||+++.... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 3566777899999999999964 588999999975432 2356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 212 (494)
+++++|..+.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99877765543 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhc---c-----------------ccccc
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---N-----------------LQMLT 272 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~---~-----------------~~~~~ 272 (494)
....+++.|+|||++.+..++.++|||||||++|||++|+.||+.......... . .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 234678999999999988899999999999999999999988865422110000 0 00000
Q ss_pred cccc------cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 DSCL------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.. ........+..+.+|+.+||+.||.+|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 00111235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=330.47 Aligned_cols=237 Identities=20% Similarity=0.276 Sum_probs=196.2
Q ss_pred ccCCCCCCCeEEEEEE----cCCCEEEEEEecCCC----CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 66 SEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.||+|+||.||++.. .+++.||||+++... ......+..|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5679999999999984 357899999997532 12245678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
++|++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 999999999863 456888999999999999999999999 999999999999999999999999998743221 2
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|+|||++.+..++.++|||||||++|||++|+.||............... ....+...+..+.+++.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999998654332222111111 11234456678999999
Q ss_pred HHccCCCCCCC-----ChHHHHH
Q 011092 294 RCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rp-----s~~~vl~ 311 (494)
+||+.+|.+|| ++.+++.
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhc
Confidence 99999999999 7888776
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=316.14 Aligned_cols=249 Identities=19% Similarity=0.195 Sum_probs=207.3
Q ss_pred CCccccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+++..++++.||.|.-|+||++...+ +..+|+|++.+..... ..+...|-+||+.++||.++.||..+..+...|+
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 45667889999999999999999654 7899999997654332 4567789999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC---
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--- 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 210 (494)
+||||+||+|..+++++..+.+++..+..++.+|+-||+|||-.| ||+|||||+||||.++|++.|+||.|+....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999999999888889999999999999999999999999 9999999999999999999999999754110
Q ss_pred ---------------------------------C------------------------CCccccCCCcCCCcCCCCCCCC
Q 011092 211 ---------------------------------D------------------------GKSYSTNLAFTPPEYLRTGRVT 233 (494)
Q Consensus 211 ---------------------------------~------------------------~~~~~~t~~y~aPE~~~~~~~~ 233 (494)
. ..+++||..|.|||++.|...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0124578899999999999999
Q ss_pred CCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCC----hHHH
Q 011092 234 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSL 309 (494)
Q Consensus 234 ~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~v 309 (494)
.++|+|+|||++|||+.|..||-+..........+.+-. .....+ ..+..+.+||+++|.+||++|.. +.||
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l---~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL---KFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC---cCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 999999999999999999999987654443332222211 111111 55678999999999999999976 6666
Q ss_pred HH
Q 011092 310 VT 311 (494)
Q Consensus 310 l~ 311 (494)
-+
T Consensus 390 K~ 391 (459)
T KOG0610|consen 390 KR 391 (459)
T ss_pred hc
Confidence 54
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=317.14 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=205.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
.+++++.||.|++|.||+|...++..||+|.++... ...+.|.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 355667889999999999997777889999997654 2457799999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--ccc--
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYS-- 216 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~-- 216 (494)
++|.+++.......+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++....... ...
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 164 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGA 164 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCC
Confidence 99999997544457899999999999999999999999 9999999999999999999999999987654321 111
Q ss_pred -cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 217 -TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 217 -~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.+..|+|||++.+..++.++||||||+++++|+| |+.||................ ....+...+..+.+++.+
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 239 (261)
T cd05068 165 KFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-----RMPCPPGCPKELYDIMLD 239 (261)
T ss_pred cCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCcCCHHHHHHHHH
Confidence 2357999999998889999999999999999999 887776543322221111111 111233456789999999
Q ss_pred HccCCCCCCCChHHHHHHhccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
||+.+|.+||++.++++.|+.+
T Consensus 240 ~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 240 CWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HhhcCcccCCCHHHHHHHHhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=331.20 Aligned_cols=249 Identities=20% Similarity=0.258 Sum_probs=199.1
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+++++.||.|+||.||++... ++..||+|.+...... ....+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecC
Confidence 5667788899999999999965 5889999998764322 2456899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--Cccc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 216 (494)
++++|.+++.. ...+++..+..++.|++.||.|||+.+.++|+||||+|||+++++.+||+|||++...... ....
T Consensus 86 ~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 86 DGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 99999999863 4568999999999999999999998533999999999999999999999999998754332 3456
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc---cc------------------------
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQ------------------------ 269 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~---~~------------------------ 269 (494)
++..|+|||++.+..++.++|||||||++|+|++|+.||.......+.... ..
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGP 243 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcc
Confidence 889999999999888999999999999999999999888643221111000 00
Q ss_pred -------------ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 -------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 -------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.............+.++.+|+.+||+.||.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 244 DSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000000000001124568999999999999999999999986
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=338.13 Aligned_cols=237 Identities=19% Similarity=0.321 Sum_probs=202.6
Q ss_pred cCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHH
Q 011092 67 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 145 (494)
.+|+|.||+||-|+ .++...+|||.+........+-+..|+.+.++|+|.|||+++|.+.+++.+-|.||-+|||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 46999999999999 55678999999988776677789999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEcccCCcccC----CCCCccccC
Q 011092 146 HLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNS----RDGKSYSTN 218 (494)
Q Consensus 146 ~l~~~~~~~l--~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~----~~~~~~~~t 218 (494)
+|.. .-+|+ .+.+.-.+..||+.||.|||.+. |||||||-+|||++ -.|.+||+|||-++.. +-..++.||
T Consensus 662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence 9974 33566 67888899999999999999998 99999999999997 6799999999976653 345688999
Q ss_pred CCcCCCcCCCCCC--CCCCCCchhHHHHHHHHHhCCCCCCCchhH--H-hhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 219 LAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALD--L-IRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 219 ~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~p~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..|||||++..++ |+.++|||||||++.||.||++||...... . .+-+... .-+.+|..++.+...+|.
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK------vHP~iPeelsaeak~Fil 813 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK------VHPPIPEELSAEAKNFIL 813 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee------cCCCCcHHHHHHHHHHHH
Confidence 9999999998765 899999999999999999999988543211 1 1111111 123467788999999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+|+.+||.+||++.+++.
T Consensus 814 rcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 814 RCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHcCCCcccCccHHHhcc
Confidence 999999999999999995
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=322.37 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=203.2
Q ss_pred CccccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
+++.++++.||+|+||.||+|.. .++..|++|.+...... ....|.+|+.+++.++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 34567778899999999999984 24578999999753322 2357889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWE---------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~ 197 (494)
+||||+++++|.+++.... ...+++.....++.|++.||.|||+++ ++||||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999985321 234788899999999999999999999 999999999999999999
Q ss_pred eEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccc
Q 011092 198 PRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 270 (494)
Q Consensus 198 ~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 270 (494)
+||+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++ |..||.+.....+.......
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998754322 22334677999999988889999999999999999999 87777554332222211111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
. ....+...+..+.+++.+||+.||.+||++.++++.|..+
T Consensus 243 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 243 Q-----LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred C-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 1 1112344567899999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=328.04 Aligned_cols=245 Identities=27% Similarity=0.468 Sum_probs=193.6
Q ss_pred cccccCCCCCCCeEEEEEEc-----CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 63 NIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++.+.||.|+||.||+|.+. .+..|+||.++..... ..+.|.+|++.+.+++||||++++|++...+..++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 34567899999999999965 2578999999654322 25789999999999999999999999998888999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|+++|+|.+++.......+++..+..|+.||+.||.|||+++ ++|+||+++||++++++.+||+|||++......
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 999999999998654567999999999999999999999998 999999999999999999999999998876322
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
........|+|||.+.+..++.++||||||+++|||++ |+.|+.......+....... .....+..++..+.
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG-----QRLPIPDNCPKDIY 235 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-----EETTSBTTSBHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccceeccchhHHHH
Confidence 22345678999999988889999999999999999999 56666543222222111111 11123344567899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHh
Q 011092 290 RLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
+++..||+.+|.+|||+.++++.|
T Consensus 236 ~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 236 SLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHhcC
Confidence 999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=325.20 Aligned_cols=247 Identities=16% Similarity=0.217 Sum_probs=201.0
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+++++.||+|+||.||++.. .+++.||+|.+...... ....+.+|+.+++.++||||+++++.+..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 34556679999999999995 46899999999653322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---c
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~ 214 (494)
+++++|.+++.......+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999998886544457999999999999999999999999 9999999999999999999999999987654332 3
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+++.|+|||++.+..++.++||||||+++|+|++|..||...............+.. .....+...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHH
Confidence 46789999999999888999999999999999999999998654322111111111111 1122344566789999999
Q ss_pred HccCCCCCCC-----ChHHHHH
Q 011092 295 CLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rp-----s~~~vl~ 311 (494)
||+.||.+|| ++.+++.
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhc
Confidence 9999999999 7778865
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=321.78 Aligned_cols=248 Identities=23% Similarity=0.322 Sum_probs=202.9
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+.+++.||.|+||.||+|... ++..||||.++..... ..+.|.+|+++++.++||||+++++++..+...++
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEE
Confidence 4566778899999999999853 2478999999765443 35689999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEc
Q 011092 134 VAEYMPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~ 201 (494)
||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEEC
Confidence 999999999999996422 235788999999999999999999999 9999999999999999999999
Q ss_pred ccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccc
Q 011092 202 TFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 274 (494)
Q Consensus 202 Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 274 (494)
|||++...... ....+++.|+|||++.+..++.++||||||+++|||++ |..||................
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~--- 241 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR--- 241 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---
Confidence 99998754321 22234678999999998999999999999999999999 888875543322221111111
Q ss_pred cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 275 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
....+...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 242 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 242 --LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11223345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=316.11 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=202.7
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.++.+++.||+|+||.||++...++..||+|.+.... .....|.+|+.++.+++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4567788899999999999997777789999987543 235679999999999999999999999999889999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 214 (494)
+++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++...... .
T Consensus 83 ~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 83 NGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 99999998642 336899999999999999999999999 9999999999999999999999999987543322 1
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..|++||++.+..++.++||||||+++|+|++ |..|+................. ...+...+..+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~ 235 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-----LYRPHLASEKVYAIMY 235 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-----CCCCCCCCHHHHHHHH
Confidence 234567999999988889999999999999999999 8877654332222111111111 1112234578999999
Q ss_pred HHccCCCCCCCChHHHHHHhc
Q 011092 294 RCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~ 314 (494)
+||+.+|.+||++.+++..|+
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-42 Score=333.81 Aligned_cols=237 Identities=22% Similarity=0.254 Sum_probs=197.2
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||++.. .+|..||+|+++... ......+..|++++..++||||+++++++...+..++||||++||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 469999999999994 568999999997532 1234567889999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
|.+++. ....+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 999886 34579999999999999999999997 78 99999999999999999999999999875322 124568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHhh
Confidence 99999999999888999999999999999999999998665433222211111 112344566889999999999
Q ss_pred CCCCCCC-----ChHHHHHH
Q 011092 298 YEPRERP-----NPKSLVTA 312 (494)
Q Consensus 298 ~dp~~Rp-----s~~~vl~~ 312 (494)
.||.+|+ ++.++++.
T Consensus 233 ~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcC
Confidence 9999996 88888863
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=338.16 Aligned_cols=245 Identities=16% Similarity=0.144 Sum_probs=197.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++.+++.||.|+||+||+|.. .+|+.||||++.... ......+.+|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 355677789999999999995 468999999997532 1224567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999999999863 456999999999999999999999999 999999999999999999999999998643211
Q ss_pred --------------------------------------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCC
Q 011092 213 --------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 254 (494)
Q Consensus 213 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p 254 (494)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 023589999999999988899999999999999999999999
Q ss_pred CCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCC---hHHHHH
Q 011092 255 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 311 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~vl~ 311 (494)
|...................... .....++.+.++|.+|+. +|.+|++ +.+++.
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~--~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFP--DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCC--CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 87543322211111100000000 111345789999999996 9999987 888876
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=329.40 Aligned_cols=239 Identities=20% Similarity=0.293 Sum_probs=194.7
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHH---hccCCCCCccEEEEEecCCccceee
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSV---GQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
++++.||+|+||.||++.. .+|+.||||+++... ....+.+.+|+.++ ..++||||+++++++..++..|+||
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~ 81 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM 81 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence 4677889999999999995 468999999997532 12244566676655 5668999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 211 (494)
||++|++|...+. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 82 E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05589 82 EYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR 157 (324)
T ss_pred cCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCc
Confidence 9999999998884 357999999999999999999999999 99999999999999999999999999875322
Q ss_pred CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 212 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 212 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||............... ....+..++..+.++
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~l 231 (324)
T cd05589 158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAISI 231 (324)
T ss_pred ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHH
Confidence 23456899999999999888999999999999999999999998765433222211111 112344566889999
Q ss_pred HHHHccCCCCCCC-----ChHHHHH
Q 011092 292 ASRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
+.+||+.||.+|| ++.++++
T Consensus 232 i~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 232 MRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 9999999999999 4666655
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=336.90 Aligned_cols=246 Identities=18% Similarity=0.173 Sum_probs=196.3
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+++++.||+|+||+||+|.. .+++.||||++..... .....+.+|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 356778889999999999994 5689999999965322 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
|++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 9999999999863 456899999999999999999999999 99999999999999999999999998753210
Q ss_pred ----------------------------------------------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHH
Q 011092 212 ----------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 245 (494)
Q Consensus 212 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl 245 (494)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0124689999999999988899999999999999
Q ss_pred HHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH--ccCCCCCCCChHHHHH
Q 011092 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC--LQYEPRERPNPKSLVT 311 (494)
Q Consensus 246 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c--l~~dp~~Rps~~~vl~ 311 (494)
|||+||..||................ ..........++.++.+++.+| +..+|..||++.+++.
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWE--NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccc--cccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 99999999986543322211111100 0000011123557889999884 4556666999999997
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=297.13 Aligned_cols=255 Identities=18% Similarity=0.211 Sum_probs=208.2
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCc-----cce
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-----RLL 133 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-----~~l 133 (494)
..|++.+.+|+|+|+-||+++ ..++..||+|++.....++.+..++|++..++++||||++++++...+.. .||
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 467888999999999999999 77899999999988777778889999999999999999999988765443 899
Q ss_pred eeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 134 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
+++|...|||.+.+... ++..+++.+.+.|+.+|++||.+||+.. +++||||||.|||+.+.+.++|.|||-+....
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP 180 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence 99999999999999753 3457999999999999999999999986 48999999999999999999999999876543
Q ss_pred CC-------------CccccCCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-cccc
Q 011092 211 DG-------------KSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-MLTD 273 (494)
Q Consensus 211 ~~-------------~~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-~~~~ 273 (494)
.. .....|..|+|||.+. +...++++|||||||+||.|+.|..||..... ..+.+. .+..
T Consensus 181 i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv~n 257 (302)
T KOG2345|consen 181 IQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAVQN 257 (302)
T ss_pred eEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEeeec
Confidence 21 1234589999999985 44578999999999999999999999854211 111111 1111
Q ss_pred ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 274 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
....-......++.+.+++++||+.||.+||+..+++..++.+.
T Consensus 258 ~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 258 AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11111112236789999999999999999999999999887653
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=329.42 Aligned_cols=231 Identities=21% Similarity=0.269 Sum_probs=192.8
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 469999999999995 458999999997532 22355678898888877 7999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 99998863 457999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|+.||.......+........ ...+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE------VVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHHHHHHcc
Confidence 999999999998889999999999999999999999987654433322221111 12334456789999999999
Q ss_pred CCCCCCCCh
Q 011092 298 YEPRERPNP 306 (494)
Q Consensus 298 ~dp~~Rps~ 306 (494)
.||.+||++
T Consensus 233 ~dP~~R~~~ 241 (320)
T cd05590 233 KNPTMRLGS 241 (320)
T ss_pred cCHHHCCCC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=322.05 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=194.7
Q ss_pred CCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 68 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 68 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
||.|+||+||++.. .+++.||+|.+...... ..+.+..|+.+++.++||||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 59999999999995 46899999999653322 235678899999999999999999999999999999999999999
Q ss_pred HHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccccc
Q 011092 144 AKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYST 217 (494)
Q Consensus 144 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 217 (494)
.+++... ....+++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 8877431 2356899999999999999999999999 999999999999999999999999998754432 23468
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++||||||+++|+|++|+.||................... ....+...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999999899999999999999999999999886432111100001111111 112344567889999999999
Q ss_pred CCCCCCC-----ChHHHHH
Q 011092 298 YEPRERP-----NPKSLVT 311 (494)
Q Consensus 298 ~dp~~Rp-----s~~~vl~ 311 (494)
.||.+|| +++++++
T Consensus 238 ~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCHHHhcCCCCCCHHHHhc
Confidence 9999999 6677775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=321.67 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=203.1
Q ss_pred CccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
++.+++++.||.|+||.||+|... .+..||||+++...... ...|..|+.++..++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 445677888999999999999853 24789999997543222 35688999999999999999999999999999
Q ss_pred ceeeecCCCCCHHHHhccc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC
Q 011092 132 LLVAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~ 197 (494)
++++||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCc
Confidence 9999999999999998521 1235788899999999999999999999 999999999999999999
Q ss_pred eEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccc
Q 011092 198 PRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 270 (494)
Q Consensus 198 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 270 (494)
+||+|||+++...... ...+++.|+|||++.++.++.++||||||+++|||++ |..|+.......+.......
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~ 242 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR 242 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999987543221 2234678999999988889999999999999999998 66666543322222111111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
. ....+..++..+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus 243 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 283 (283)
T cd05091 243 Q-----VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW 283 (283)
T ss_pred C-----cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence 1 1123445678899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=315.11 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=204.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
.+++++.||.|+||.||+|...+++.||+|.+..... ....|.+|+.++++++||||+++++++. .+..+++|||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCC
Confidence 4567788899999999999987889999999975442 4568999999999999999999999874 4578999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----cc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 215 (494)
++|.+++....+..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05067 85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA 163 (260)
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence 99999987545567899999999999999999999999 9999999999999999999999999987654221 22
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.++..|+|||++.+..++.++||||||+++++|++ |+.||............... .....+...+.++.+++.+
T Consensus 164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05067 164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-----YRMPRPDNCPEELYELMRL 238 (260)
T ss_pred cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHH
Confidence 34678999999988889999999999999999999 88887654332222111111 1112233456789999999
Q ss_pred HccCCCCCCCChHHHHHHhccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
||..+|++|||+++++..|+.+
T Consensus 239 ~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 239 CWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred HccCChhhCCCHHHHHHHhhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=336.67 Aligned_cols=246 Identities=20% Similarity=0.226 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.+++.||.|+||+||+|... +|+.||||+++... ......+..|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 4567778899999999999954 68999999997532 1235678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999974 367999999999999999999999999 9999999999999999999999999987544322
Q ss_pred ------------------------------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh
Q 011092 214 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263 (494)
Q Consensus 214 ------------------------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~ 263 (494)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34578999999999988999999999999999999999999876543322
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCC-hHHHHHH
Q 011092 264 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-PKSLVTA 312 (494)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~vl~~ 312 (494)
.............+ .....+..+.++|.+||. ||.+||+ +.+++..
T Consensus 239 ~~~i~~~~~~~~~p--~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 239 YNKIINWKESLRFP--PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHhccCCcccCC--CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 22111100000111 111246889999999997 9999999 9999873
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=327.10 Aligned_cols=236 Identities=20% Similarity=0.280 Sum_probs=193.2
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++..++..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 469999999999995 458899999997532 22345566777777655 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 99998863 456999999999999999999999999 99999999999999999999999999875432 224568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|+.||.......+....... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND------RPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998765433222221111 112344566789999999999
Q ss_pred CCCCCCCChH-HHHH
Q 011092 298 YEPRERPNPK-SLVT 311 (494)
Q Consensus 298 ~dp~~Rps~~-~vl~ 311 (494)
.||.+||++. +++.
T Consensus 233 ~~P~~R~~~~~~l~~ 247 (316)
T cd05592 233 RDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCHHHcCCChHHHHc
Confidence 9999999875 4543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=305.34 Aligned_cols=245 Identities=21% Similarity=0.239 Sum_probs=208.0
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCC--CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+..+||+|.|++||++. ..+|+.+|+|.+... ...+.+.+.+|+.|.+.|+|||||++.+.+......|||+|++
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m 92 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 92 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence 4555677999999999998 556999999988532 3335778899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC---CCeEEcccCCcccCCCCC--
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~-- 213 (494)
.|++|..-+..+ --+++..+-..+.||+.+|.|+|.++ |||||+||.|+|+.+. --+||+|||+|.....+.
T Consensus 93 ~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 93 TGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred cchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 999998766532 45788888899999999999999999 9999999999999533 349999999999877543
Q ss_pred -ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
.+.|||+|||||++...+|+..+|||+-|||||-|+.|..||+++....+.++......+-. ....+.++++..+|+
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~--~~~w~~is~~Ak~Lv 247 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP--SPEWDTVTPEAKSLI 247 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC--CcccCcCCHHHHHHH
Confidence 45789999999999999999999999999999999999999999777666665555433322 223456778999999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||..||.+|.|+.|.|.
T Consensus 248 rrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 248 RRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHhccChhhhccHHHHhC
Confidence 9999999999999999987
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=327.36 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=208.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
..+.++||+|-||.|.++....+..||||.++...... ...|.+|+++|.+|+|||||+++|+|..++.+++|+||+++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 44568899999999999999888999999999876554 57899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcc-----
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~----- 215 (494)
|+|.+++.......+.-....+|+.||+.||+||.+.+ +|||||.+.|+|++.++++||+|||+++..-.+..+
T Consensus 620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 99999998654333455667789999999999999999 999999999999999999999999999965544332
Q ss_pred -ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhC--CCCCCCchhHHhhhcccccccccc--ccCCCCchhHHHHHH
Q 011092 216 -STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG--KHIPPSHALDLIRDRNLQMLTDSC--LEGQFTDDDGTELVR 290 (494)
Q Consensus 216 -~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg--~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 290 (494)
.-.++|||||.+.-+++|.+||||+||+++||+++- ..|+.....+.+-+..-..+.+.. .....|.-++..+++
T Consensus 699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lye 778 (807)
T KOG1094|consen 699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYE 778 (807)
T ss_pred eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHH
Confidence 235899999999999999999999999999998763 456654333322221111111111 112235567789999
Q ss_pred HHHHHccCCCCCCCChHHHHHHhccc
Q 011092 291 LASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
++..||..+..+|||++++...|...
T Consensus 779 lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 779 LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 99999999999999999999888654
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=334.23 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEEEcC------CCEEEEEEecCCCCC-ChHHHHHHHHHHhccC-CCCCccEEEEEecCCccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 132 (494)
.+.+.+.||+|+||.||+|.... +..||||+++..... ..+.|.+|+.++.++. ||||++++++|...+..+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 45666888999999999998421 346999999754332 2457899999999995 999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccC-------------------------------------------------------------
Q 011092 133 LVAEYMPNETLAKHLFHWE------------------------------------------------------------- 151 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 151 (494)
|||||+++|+|.+++....
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999999886321
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCe
Q 011092 152 ---------------------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 198 (494)
Q Consensus 152 ---------------------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~ 198 (494)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~ 276 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIV 276 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEE
Confidence 124788889999999999999999999 9999999999999999999
Q ss_pred EEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccc
Q 011092 199 RLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 271 (494)
Q Consensus 199 kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 271 (494)
||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..|++....+.........
T Consensus 277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~- 355 (400)
T cd05105 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS- 355 (400)
T ss_pred EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc-
Confidence 999999987543321 2335678999999998889999999999999999997 88777653222111100000
Q ss_pred ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 272 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
......+...+..+.+++.+||+.+|++|||+.+|.+.|+.+.+
T Consensus 356 ---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 356 ---GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 01112234556789999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=328.49 Aligned_cols=240 Identities=21% Similarity=0.309 Sum_probs=203.1
Q ss_pred cccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCCh---HHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 65 VSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
++.||.|+||-||.|+ ..+...||||++..+..... ..++.|+..|.+++|||++.+.|+|..+...|||||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 4677999999999999 56788999999987665553 358899999999999999999999999999999999996
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCccccCCC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 220 (494)
||-.|++.- -.+++.+.++..|..+.+.||+|||+.+ .||||||..|||+++.|.|||+|||.|.......+++|||.
T Consensus 110 GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 110 GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 788887743 3578999999999999999999999999 99999999999999999999999999999888999999999
Q ss_pred cCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCch-hHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 221 FTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 221 y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
|||||++. .+.|+-++||||||+++.||...++|.+... ...+. .+.+...+.+ ...+.+..+.+|+..||
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY--HIAQNesPtL---qs~eWS~~F~~Fvd~CL 262 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQNESPTL---QSNEWSDYFRNFVDSCL 262 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH--HHHhcCCCCC---CCchhHHHHHHHHHHHH
Confidence 99999985 4679999999999999999999998755432 11111 1111111222 14466789999999999
Q ss_pred cCCCCCCCChHHHHHH
Q 011092 297 QYEPRERPNPKSLVTA 312 (494)
Q Consensus 297 ~~dp~~Rps~~~vl~~ 312 (494)
++-|.+|||.++++..
T Consensus 263 qKipqeRptse~ll~H 278 (948)
T KOG0577|consen 263 QKIPQERPTSEELLKH 278 (948)
T ss_pred hhCcccCCcHHHHhhc
Confidence 9999999999998753
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=325.60 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=201.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCC----EEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++++++.||+|+||.||+|.+ .++. .||+|.++.... ...++|..|+.+++.++||||++++|+|... ..++|
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v 86 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 86 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceee
Confidence 456777789999999999984 3343 489999875432 2356789999999999999999999999764 57899
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 214 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 214 (494)
+||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 87 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 87 TQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred eecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 9999999999998742 346889999999999999999999999 99999999999999999999999999986543221
Q ss_pred ------cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 215 ------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 215 ------~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
..++..|++||++.+..++.++||||||+++|||++ |..|+.......+....... .....+..++..
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 239 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-----ERLPQPPICTID 239 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-----CCCCCCCCCCHH
Confidence 223568999999998889999999999999999998 88887654332221111100 001112334578
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
+.+++.+||..+|.+||++.+++..|..+....
T Consensus 240 ~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 240 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999998776543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=325.17 Aligned_cols=249 Identities=19% Similarity=0.247 Sum_probs=194.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.+++++.||.|+||.||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++..+...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 45677888899999999999954 6899999999754322 245678999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 96 688877754 2356889999999999999999999999 999999999999999999999999998754321 2
Q ss_pred ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchh--HHhhhc-----c-----c---cc---cccc
Q 011092 214 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDR-----N-----L---QM---LTDS 274 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~--~~~~~~-----~-----~---~~---~~~~ 274 (494)
...+|+.|+|||++.+. .++.++|||||||++|+|++|..||..... ..+... . . .. ....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 34578999999998654 478899999999999999999999865311 000000 0 0 00 0000
Q ss_pred cccCCCCc---------hhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 CLEGQFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ~~~~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
......+. ..+..+.+++.+||+.||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000 12357889999999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=321.78 Aligned_cols=249 Identities=20% Similarity=0.257 Sum_probs=193.6
Q ss_pred cccccccCCCCCCCeEEEEEE-c-CCCEEEEEEecCCCCC--ChHHHHHHHHHHhcc---CCCCCccEEEEEec-----C
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-E-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL---RNNRLTNLLGCCCE-----G 128 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~-----~ 128 (494)
.|++++.||+|+||.||+|.. . ++..||+|.++..... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 356778889999999999985 3 4688999998754322 234567788777766 69999999999863 3
Q ss_pred CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 129 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
...++||||++ ++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 45899999997 79999887544556899999999999999999999999 99999999999999999999999999876
Q ss_pred CCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------------c
Q 011092 209 SRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------L 271 (494)
Q Consensus 209 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~--------------~ 271 (494)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|++||............... +
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5432 2346789999999998888999999999999999999999888654221111000000 0
Q ss_pred ccccc-------cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 TDSCL-------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ~~~~~-------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..... ........+..+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 00111235678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=329.10 Aligned_cols=236 Identities=19% Similarity=0.259 Sum_probs=194.7
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCC-CCccEEEEEecCCccceeee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hp-nIv~l~~~~~~~~~~~lv~e 136 (494)
+++++.||.|+||.||+|... +++.||||++.... ....+.+..|+.++..+.|+ +|+.+++++...+..|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 466778899999999999954 57899999997532 22356788899999999664 68889999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----C
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 212 (494)
|++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 82 ~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence 9999999998863 456899999999999999999999999 99999999999999999999999999864321 2
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li 232 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSIC 232 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 2456899999999999888999999999999999999999998654433222211111 1123445668899999
Q ss_pred HHHccCCCCCCCCh
Q 011092 293 SRCLQYEPRERPNP 306 (494)
Q Consensus 293 ~~cl~~dp~~Rps~ 306 (494)
.+||..||.+|++.
T Consensus 233 ~~~l~~~P~~R~~~ 246 (324)
T cd05587 233 KGLLTKHPAKRLGC 246 (324)
T ss_pred HHHhhcCHHHcCCC
Confidence 99999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=314.43 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=203.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
++++++.||+|+||.||+|...++..||+|.+..... ....|.+|+.++++++||||+++++++. .+..+++|||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 4567788999999999999987888899999976443 4567999999999999999999999885 4568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----cc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 215 (494)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence 99999997544456899999999999999999999999 9999999999999999999999999987654321 12
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.++..|+|||.+.+..++.++||||||+++|+|++ |..||............... .....+...+..+.+++.+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-----YRMPCPQDCPISLHELMLQ 238 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHHH
Confidence 34567999999988889999999999999999999 77777554322222211111 1112344566889999999
Q ss_pred HccCCCCCCCChHHHHHHhcc
Q 011092 295 CLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~ 315 (494)
||..+|.+|||+.++.+.|+.
T Consensus 239 ~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 239 CWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=334.68 Aligned_cols=245 Identities=14% Similarity=0.116 Sum_probs=194.8
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++++++.||.|+||+||++.. .+++.||||++.... ......+..|+.++.+++||||+++++.+.+.+..|+|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 355677789999999999985 458999999996532 1224567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 9999999999973 467999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCC
Q 011092 213 -----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 257 (494)
Q Consensus 213 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~ 257 (494)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 124689999999999988899999999999999999999999876
Q ss_pred chhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCC---CCCChHHHHH
Q 011092 258 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR---ERPNPKSLVT 311 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~---~Rps~~~vl~ 311 (494)
...................+. ....+.++.+++.+++. +|. .||+++++++
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPP--EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCC--cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC
Confidence 543322221111100001111 11245678888888654 344 4689999987
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=328.51 Aligned_cols=236 Identities=19% Similarity=0.258 Sum_probs=195.4
Q ss_pred cCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|... +++.||||+++... ......+..|.+++..+ +||||+++++++..++..|+||||++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 4699999999999954 58899999997532 22345677899998876 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|...+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 99988863 456899999999999999999999999 99999999999999999999999999875322 223468
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|+.||............... ....+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------DVLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhc
Confidence 99999999999888999999999999999999999998765433322221111 012233456789999999999
Q ss_pred CCCCCCC-------ChHHHHH
Q 011092 298 YEPRERP-------NPKSLVT 311 (494)
Q Consensus 298 ~dp~~Rp-------s~~~vl~ 311 (494)
.||.+|| ++.++++
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhc
Confidence 9999999 7777775
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=334.68 Aligned_cols=249 Identities=16% Similarity=0.164 Sum_probs=201.4
Q ss_pred CCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+...+++++.||+|+||.||++.. .++..||+|++.... ......+..|+.+++.++||||+++++++..++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 445677888889999999999995 458999999996422 1234557889999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 121 VMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999885 346888999999999999999999999 999999999999999999999999998765432
Q ss_pred ----CccccCCCcCCCcCCCCC----CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 213 ----KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....................+ .....
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~ 274 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFP--DDIEI 274 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCC--CcCCC
Confidence 235689999999998653 37889999999999999999999987654332222211111100111 11135
Q ss_pred HHHHHHHHHHHccCCCCC--CCChHHHHHH
Q 011092 285 GTELVRLASRCLQYEPRE--RPNPKSLVTA 312 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~--Rps~~~vl~~ 312 (494)
+.++.+++.+||+.+|.+ |+|+.+++..
T Consensus 275 s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 275 SKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 688999999999999988 9999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=331.17 Aligned_cols=254 Identities=20% Similarity=0.337 Sum_probs=215.5
Q ss_pred cccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 63 NIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.+...||-|.||.||.|.++. ...||||.++.+.. ..++|+.|+.+|+.++|||+|+|+|+|..+..+|||+|||.+|
T Consensus 270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG 348 (1157)
T KOG4278|consen 270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG 348 (1157)
T ss_pred eeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence 345678999999999999654 77899999987653 5789999999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--cccc--
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYST-- 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~~-- 217 (494)
+|-++|+......++.-..+.++.||..||.||..++ +|||||-..|+|+.++..+||+|||+++...... .+.|
T Consensus 349 NLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAK 427 (1157)
T KOG4278|consen 349 NLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAK 427 (1157)
T ss_pred cHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCcc
Confidence 9999998766677888888999999999999999998 9999999999999999999999999999765432 2223
Q ss_pred -CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 218 -NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 218 -t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.+.|.|||.+....++.|+|||+|||+|||+.| |..|+++-....+ ..+........-|..+++.+++|+..|
T Consensus 428 FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV-----Y~LLEkgyRM~~PeGCPpkVYeLMraC 502 (1157)
T KOG4278|consen 428 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YGLLEKGYRMDGPEGCPPKVYELMRAC 502 (1157)
T ss_pred CcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH-----HHHHhccccccCCCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999 4556665322211 122222333445677889999999999
Q ss_pred ccCCCCCCCChHHHHHHhccccccCCCC
Q 011092 296 LQYEPRERPNPKSLVTALSPLQKETEVP 323 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~~~~~~~ 323 (494)
|+++|.+||++.++.+.++.+.....+.
T Consensus 503 W~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 503 WNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred hcCCcccCccHHHHHHHHHHHhcccccc
Confidence 9999999999999999999887765443
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=320.18 Aligned_cols=243 Identities=16% Similarity=0.219 Sum_probs=194.3
Q ss_pred CCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 68 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 68 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
||+|+||.||++.. .+|+.||+|.+...... ....+..|++++++++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 59999999999995 45899999999643211 234566799999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---ccccCCC
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLA 220 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~~~t~~ 220 (494)
.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98886545557899999999999999999999999 9999999999999999999999999987654332 3457899
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 300 (494)
|+|||++.+..++.++|||||||++|+|++|+.||...................... ......+.++.+++.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999998889999999999999999999998876432111100000111110000 0112456789999999999999
Q ss_pred CCCCChHHHHHH
Q 011092 301 RERPNPKSLVTA 312 (494)
Q Consensus 301 ~~Rps~~~vl~~ 312 (494)
.+||++.++++.
T Consensus 239 ~~R~~~~~~~~~ 250 (277)
T cd05607 239 EDRLGSREKNDD 250 (277)
T ss_pred hhCCCCccchhh
Confidence 999999776643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=331.55 Aligned_cols=234 Identities=20% Similarity=0.229 Sum_probs=194.7
Q ss_pred ccCCCCCCCeEEEEEE----cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 66 SEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+.||+|+||.||++.. .+|+.||+|++..... .....+..|++++.+++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4679999999999874 3578999999975332 234567789999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
+++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 9999999863 456899999999999999999999999 999999999999999999999999998764332 235
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.|++.|+|||.+.+..++.++|||||||++|+|++|+.||............... ....+...+..+.+++.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHH
Confidence 6889999999999888899999999999999999999998654332222211111 1123445668899999999
Q ss_pred ccCCCCCCCChHH
Q 011092 296 LQYEPRERPNPKS 308 (494)
Q Consensus 296 l~~dp~~Rps~~~ 308 (494)
|+.||.+||++.+
T Consensus 233 l~~~P~~R~~a~~ 245 (318)
T cd05582 233 FKRNPANRLGAGP 245 (318)
T ss_pred hhcCHhHcCCCCC
Confidence 9999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=308.67 Aligned_cols=251 Identities=20% Similarity=0.255 Sum_probs=199.2
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCC-CccEEEEEecCC------
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNR-LTNLLGCCCEGD------ 129 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~~------ 129 (494)
..+..++.+|+|+||+||+|+ ..+|+.||+|++.-.... -.....+|+.+|+.++|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 345566778999999999999 667999999999765432 3556789999999999999 999999998877
Q ss_pred ccceeeecCCCCCHHHHhcccCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 130 ERLLVAEYMPNETLAKHLFHWET--HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
..++|+||++ .+|..++..... ..++...+..++.||+.||+|||+++ |+||||||.||||+++|.+||+|||+|+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHH
Confidence 7889999997 899999975332 35777899999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC----CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc----------
Q 011092 208 NSRDG----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---------- 272 (494)
Q Consensus 208 ~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~---------- 272 (494)
...-. ....+|..|.|||++.+. .|++..||||+|||+.||+++++.|++.............+.
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 65522 234678899999999987 589999999999999999999988887533211111100000
Q ss_pred ----ccc--ccCCC-Cc-------hhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 273 ----DSC--LEGQF-TD-------DDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 273 ----~~~--~~~~~-~~-------~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
+.. ..... +. .......+++.+||+.+|..|.|+..++..
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000 00000 11 112478899999999999999999999873
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=312.75 Aligned_cols=241 Identities=27% Similarity=0.389 Sum_probs=195.5
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHH
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~ 144 (494)
.||.|+||.||+|.. .+++.||+|.+...... ....|.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 579999999999995 56899999998654322 2457899999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC------ccccC
Q 011092 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTN 218 (494)
Q Consensus 145 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t 218 (494)
+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... ....+
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 82 TFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 99864 2346899999999999999999999999 9999999999999999999999999987543321 11224
Q ss_pred CCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 219 ~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
..|+|||.+.++.++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.+||+
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-----VRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-----CCCCCcccCCHHHHHHHHHHcC
Confidence 56999999998889999999999999999998 76666433222111111111 1112334456789999999999
Q ss_pred CCCCCCCChHHHHHHhc
Q 011092 298 YEPRERPNPKSLVTALS 314 (494)
Q Consensus 298 ~dp~~Rps~~~vl~~L~ 314 (494)
.+|.+|||+.++++.|+
T Consensus 235 ~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 235 YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=321.00 Aligned_cols=253 Identities=22% Similarity=0.295 Sum_probs=205.5
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++.+.+.||.|+||.||++... ++..|++|.+........+.+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4556678899999999999842 3456899998765544456799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEE
Q 011092 135 AEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 200 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 200 (494)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.++|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEE
Confidence 99999999999986422 134889999999999999999999999 999999999999999999999
Q ss_pred cccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccccc
Q 011092 201 STFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTD 273 (494)
Q Consensus 201 ~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 273 (494)
+|||++...... ....++..|+|||++.+..++.++||||||+++|+|+| |..|+................
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-- 242 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR-- 242 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCC--
Confidence 999998754332 22345678999999998889999999999999999999 887765433222211111111
Q ss_pred ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 274 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
....+...+..+.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 243 ---~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 243 ---VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ---CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1112334567899999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=316.55 Aligned_cols=252 Identities=17% Similarity=0.241 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.+.+.||.|+||.||+|.. .+++.||||.+......+ ...|.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 455667789999999999994 568999999886533222 3468899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 137 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|+++++|.+++... ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 99999999888532 2345889999999999999999999999 9999999999999999999999999987654322
Q ss_pred ---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH--hhhccccccccccccCCCCchhHHHH
Q 011092 214 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
...+++.|+|||.+.+..++.++|+||||+++|+|++|+.|+....... +... .. ........+...+..+
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 237 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK-IE---QCDYPPLPTEHYSEKL 237 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH-Hh---cCCCCCCChhhcCHHH
Confidence 3467889999999988888999999999999999999999875432211 1111 01 1111111223455789
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.+++.+||..+|.+||++.++++.|+++.
T Consensus 238 ~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 238 RELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 99999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=332.10 Aligned_cols=242 Identities=17% Similarity=0.182 Sum_probs=193.4
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..|.+++.||+|+||.||++.. .+++.||+|... ...+.+|++++++++||||+++++++..+...++|||++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 4578888899999999999994 568999999753 245789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----CC
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-----GK 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-----~~ 213 (494)
. ++|..++.. ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 166 ~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 166 K-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred C-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 5 788888863 456899999999999999999999999 99999999999999999999999999864322 12
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh--------HH---hhh--cc------------c
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--------DL---IRD--RN------------L 268 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~--------~~---~~~--~~------------~ 268 (494)
...||+.|+|||++.+..++.++|||||||++|||+||..|+..... .. +.. +. .
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 35689999999999988899999999999999999999977643210 00 000 00 0
Q ss_pred c----cc-c-cccccCCCC-----chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 Q----ML-T-DSCLEGQFT-----DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 ~----~~-~-~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. .. . ........+ ...+.++.+|+.+||+.||.+|||+.++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 00 0 000000000 134668999999999999999999999996
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=326.29 Aligned_cols=235 Identities=19% Similarity=0.242 Sum_probs=193.9
Q ss_pred cCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|... +|..||+|.++... ......+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 4699999999999954 58999999997532 12345677788888765 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.++|+|||+++.... .....|
T Consensus 82 ~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 99998863 456899999999999999999999999 99999999999999999999999999874321 234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|+.||.......+....... ....+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999889999999999999999999999998765433322221111 112334456789999999999
Q ss_pred CCCCCCCChH-HHH
Q 011092 298 YEPRERPNPK-SLV 310 (494)
Q Consensus 298 ~dp~~Rps~~-~vl 310 (494)
.||.+||++. +++
T Consensus 233 ~dP~~R~~~~~~~~ 246 (316)
T cd05620 233 RDPTRRLGVVGNIR 246 (316)
T ss_pred CCHHHcCCChHHHH
Confidence 9999999984 555
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=313.43 Aligned_cols=248 Identities=24% Similarity=0.334 Sum_probs=202.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
.+++++.||+|+||.||+|...++..||+|.++... ...+.|.+|++++++++||||+++++++. .+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK 84 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCC
Confidence 467788899999999999997666789999997533 24567999999999999999999999875 4568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----cc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 215 (494)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||.+....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~ 163 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 163 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCC
Confidence 99999997544456899999999999999999999999 9999999999999999999999999987554322 22
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.++..|++||+..+..++.++||||||+++|+|+| |..||................ ....+...+..+.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~ 238 (262)
T cd05071 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-----RMPCPPECPESLHDLMCQ 238 (262)
T ss_pred cccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-----CCCCccccCHHHHHHHHH
Confidence 34568999999988889999999999999999999 666665443222211111110 111233556789999999
Q ss_pred HccCCCCCCCChHHHHHHhccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
||+.+|.+||++.++++.|+.+
T Consensus 239 ~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 239 CWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HccCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=312.44 Aligned_cols=241 Identities=21% Similarity=0.259 Sum_probs=196.3
Q ss_pred cCCCCCCCeEEEEEE---cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
+||+|+||.||+|.+ .++..||+|+++..... ..+.+..|+.++..++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 579999999999974 35789999998754322 2467899999999999999999999885 45678999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-------c
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------S 214 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~ 214 (494)
+|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++....... .
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 99999963 456899999999999999999999999 9999999999999999999999999987654322 1
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+++.|+|||.+....++.++||||||+++|||++ |..||.......+....... .....+...+.++.++|.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG-----ERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHHH
Confidence 223578999999988889999999999999999998 88887654322221111111 111234456688999999
Q ss_pred HHccCCCCCCCChHHHHHHhccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+||+.||++||++.+|...|+..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhcc
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=334.51 Aligned_cols=246 Identities=16% Similarity=0.135 Sum_probs=195.7
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++.+++.||.|+||.||++.. .+++.||||++.... ....+.+.+|++++.+++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 355677889999999999994 568999999986432 1224568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++||+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999999999863 456899999999999999999999999 999999999999999999999999998532110
Q ss_pred -----------------------------------------------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHH
Q 011092 213 -----------------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 245 (494)
Q Consensus 213 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl 245 (494)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 023588999999999988899999999999999
Q ss_pred HHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCC---CChHHHHHH
Q 011092 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER---PNPKSLVTA 312 (494)
Q Consensus 246 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~vl~~ 312 (494)
|||+||..||.....................+ .....+.++.+++.+||. +|.+| +|+.+++..
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFP--DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCC--CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999999986543322111111100000000 011345789999999998 67665 599998863
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=315.99 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=201.2
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..++++++.||+|+||.||+|.. .+++.||+|++..........+.+|+.++.+++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34677888889999999999994 56889999999765444456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
+++++|.+++.. ..++++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 999999998863 457899999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccCCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc-ccccccccccCCCCchhHHHHH
Q 011092 214 SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
...++..|+|||.+. ...++.++||||||+++|+|++|+.|+............ ......+.. ......+..+.
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKL--KDKTKWSSTFH 242 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCC--ccccccCHHHH
Confidence 345788999999884 344788999999999999999999887432211100000 000111111 11223567899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHh
Q 011092 290 RLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
+++.+||..+|++|||++++++.|
T Consensus 243 ~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 243 NFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHhhCChhhCcCHHHHhcCC
Confidence 999999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=325.47 Aligned_cols=236 Identities=20% Similarity=0.262 Sum_probs=193.7
Q ss_pred cCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|... +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 5699999999999954 58899999997532 22345677788888765 9999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 99999863 456899999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|+.||............... ....+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD------NPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHhc
Confidence 99999999999888999999999999999999999998654433222211110 112233456789999999999
Q ss_pred CCCCCCCChH-HHHH
Q 011092 298 YEPRERPNPK-SLVT 311 (494)
Q Consensus 298 ~dp~~Rps~~-~vl~ 311 (494)
.||.+||++. +++.
T Consensus 233 ~~P~~R~~~~~~l~~ 247 (316)
T cd05619 233 REPERRLGVKGDIRQ 247 (316)
T ss_pred cCHhhcCCChHHHHc
Confidence 9999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=326.22 Aligned_cols=236 Identities=19% Similarity=0.273 Sum_probs=196.0
Q ss_pred cCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||.|+||.||++... ++..||||+++... ......+..|..++..+ +||||+++++++...+..++||||++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 4699999999999954 58899999997532 22345677899999888 7999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||+++++.+||+|||+++.... .....+
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 99998863 457999999999999999999999999 99999999999999999999999999865321 223468
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
++.|+|||++.+..++.++|||||||++|+|++|+.||............... ....+...+..+.+++.+||+
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcc
Confidence 89999999999889999999999999999999999998654433222211111 112344566889999999999
Q ss_pred CCCCCCCCh-----HHHHH
Q 011092 298 YEPRERPNP-----KSLVT 311 (494)
Q Consensus 298 ~dp~~Rps~-----~~vl~ 311 (494)
.||.+|||+ .+++.
T Consensus 233 ~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCHHHcCCCCCCCHHHHhc
Confidence 999999999 77775
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=298.82 Aligned_cols=248 Identities=20% Similarity=0.210 Sum_probs=201.3
Q ss_pred CccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC----C----hHHHHHHHHHHhcc-CCCCCccEEEEEecC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP----D----PRQFLEEARSVGQL-RNNRLTNLLGCCCEG 128 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~ 128 (494)
|..++--..+|+|..++|-++. ..+|..+|+|++...... . .+.-.+|+.||+++ .||||+.+.+++..+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3333333444899999999888 556899999999643221 1 23456899999999 899999999999999
Q ss_pred CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 129 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
...++|+|.|+.|.|.|+|. +.-.+++....+|+.|+..|+.|||.++ ||||||||+|||++++.++||+|||++..
T Consensus 96 sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred chhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEeccceeec
Confidence 99999999999999999997 4567999999999999999999999999 99999999999999999999999999998
Q ss_pred CCCCC---ccccCCCcCCCcCCCC------CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCC
Q 011092 209 SRDGK---SYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 209 ~~~~~---~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (494)
...+. ..+||++|+|||.+.- ..|+...|+|+.|||+|.|+.|.+||+....-.+......... .....
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky--qF~sp 250 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY--QFRSP 250 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc--ccCCc
Confidence 87764 5689999999998742 3488899999999999999999988875433322221111111 11112
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
-..+.+....+||.+||+.||.+|.|+++++.
T Consensus 251 eWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 251 EWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred chhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 23466788999999999999999999999996
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=312.40 Aligned_cols=245 Identities=26% Similarity=0.357 Sum_probs=200.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
++.+.+.||+|+||.||++...++..+|+|.+..... ....|.+|+++++.++||||+++++++...+..++||||++|
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4556778899999999999987777899999865432 346788999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc-----c
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----Y 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-----~ 215 (494)
++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++....... .
T Consensus 84 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 84 GCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence 9999998642 346899999999999999999999999 99999999999999999999999999876543221 1
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.++..|+|||.+.+..++.++||||||+++|+|++ |..||............... .....+...+..+.+++.+
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-----YRLYRPKLAPTEVYTIMYS 236 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHH
Confidence 22457999999998889999999999999999999 67776543222211111111 1112233456889999999
Q ss_pred HccCCCCCCCChHHHHHHh
Q 011092 295 CLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L 313 (494)
||..+|++|||+.++++.|
T Consensus 237 cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 237 CWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HhcCChhhCcCHHHHHHHh
Confidence 9999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-41 Score=327.19 Aligned_cols=236 Identities=19% Similarity=0.258 Sum_probs=195.0
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++++..||+|+||.||+|... ++..||||++..... .....+..|..++..+ +||+|+.+++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 456677899999999999954 578999999975421 2234567788888877 68999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----C
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 212 (494)
|+++|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence 9999999998863 456899999999999999999999999 99999999999999999999999999875332 2
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......+....... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li 232 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAIC 232 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCcCCHHHHHHH
Confidence 3456899999999999989999999999999999999999998765433322221111 1123445668899999
Q ss_pred HHHccCCCCCCCCh
Q 011092 293 SRCLQYEPRERPNP 306 (494)
Q Consensus 293 ~~cl~~dp~~Rps~ 306 (494)
.+||+.+|.+|++.
T Consensus 233 ~~~l~~~p~~R~~~ 246 (323)
T cd05616 233 KGLMTKHPGKRLGC 246 (323)
T ss_pred HHHcccCHHhcCCC
Confidence 99999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=313.45 Aligned_cols=238 Identities=19% Similarity=0.338 Sum_probs=191.7
Q ss_pred cCCCCCCCeEEEEEEcC-------------CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 67 EHGEKAPNVVYKGKLEN-------------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.||+|+||.||+|...+ ...|++|.+..........|..|+.++..++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 56999999999998432 23589999876544445678899999999999999999999999889999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC-------eEEcccCCc
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-------PRLSTFGLM 206 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~-------~kl~Dfgla 206 (494)
||||+++++|..++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999988753 2356899999999999999999999999 999999999999987664 899999998
Q ss_pred ccCCCCCccccCCCcCCCcCCC-CCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 207 KNSRDGKSYSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 207 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
..........++..|+|||.+. +..++.++||||||+++|||++ |..|+........... .. ... ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-~~----~~~--~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-YE----GQC--MLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-Hh----cCc--cCCCCC
Confidence 7765555667888999999886 4568899999999999999984 6666544322211110 00 000 112233
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHHHh
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
+.++.+|+.+||+.||.+||++.+++..|
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 57899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=327.49 Aligned_cols=240 Identities=17% Similarity=0.258 Sum_probs=193.6
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||++.. .+++.||||+++.... .....+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999995 4589999999975322 2245688899999998 7999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----CCCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~~~~~ 217 (494)
+|.+++. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++... ......|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 9998886 3467999999999999999999999999 9999999999999999999999999987422 1234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-----hhhccccccccccccCCCCchhHHHHHHHH
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
|+.|+|||++.+..++.++|||||||++|+|+||+.||....... ........+... ....|..++..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence 999999999998889999999999999999999999885311100 000000001111 1123455668899999
Q ss_pred HHHccCCCCCCCC------hHHHHH
Q 011092 293 SRCLQYEPRERPN------PKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps------~~~vl~ 311 (494)
.+||+.||.+||| +.++++
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999999999997 556654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=312.41 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=203.4
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec-CCccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~e~ 137 (494)
..++.+.+.+|+|+||.||++... |..|++|.++... ..+.|.+|+.++++++|+||+++++++.. ++..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 345667788899999999999864 7789999986543 35679999999999999999999997654 4568999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Cccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 216 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 216 (494)
+++++|.+++.......+++..++.++.||+.||+|||+++ ++||||||+||++++++.+||+|||++...... ....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 99999999997544456899999999999999999999999 999999999999999999999999998764432 2334
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
++..|+|||++.+..++.++||||||+++|+|++ |+.|+.......+....... .....+...+..+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHHHH
Confidence 4678999999988889999999999999999998 88777654333222111111 11123345668899999999
Q ss_pred ccCCCCCCCChHHHHHHhccc
Q 011092 296 LQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~ 316 (494)
|+.+|.+|||+.++++.|+.+
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=319.81 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=203.9
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.+.+.+.+|.|+||.||++... ++..||+|.+..........+.+|++++.+++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 85 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 3456677799999999999842 2456899998765444456799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEccc
Q 011092 135 AEYMPNETLAKHLFHWE-----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 203 (494)
|||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+|||+++++.++|+||
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccC
Confidence 99999999999986321 134899999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccc
Q 011092 204 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 276 (494)
Q Consensus 204 gla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
|++....... ...+++.|+|||++.+..++.++||||||+++++|+| |..||.................
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~---- 240 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV---- 240 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc----
Confidence 9987543221 2234678999999998889999999999999999999 7777654432222111111110
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
...+...+..+.+|+.+||+.+|.+|||+.+++..|+.+...
T Consensus 241 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 -LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111233457899999999999999999999999999888643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=318.02 Aligned_cols=250 Identities=22% Similarity=0.273 Sum_probs=202.2
Q ss_pred CccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
+..+.+.++||+|+||.||++... ++..|++|.+..........|.+|+++++.++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 345667788999999999999732 35689999987655444668999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCC-------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeE
Q 011092 133 LVAEYMPNETLAKHLFHWET-------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~k 199 (494)
++|||+++++|.+++..... ..+++..++.++.||+.||+|||+.+ ++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEE
Confidence 99999999999999864321 34889999999999999999999999 99999999999999999999
Q ss_pred EcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccc
Q 011092 200 LSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLT 272 (494)
Q Consensus 200 l~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 272 (494)
|+|||++...... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...............
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-- 240 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-- 240 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC--
Confidence 9999998754322 12234678999999998889999999999999999998 77776443222111111111
Q ss_pred cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.....+..++..+.+++.+||+.||.+||++.+|+..|+
T Consensus 241 ---~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 ---RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111223345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=336.24 Aligned_cols=246 Identities=18% Similarity=0.182 Sum_probs=197.8
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+++++.||+|+||.||++.. .+++.||||++.... ......+.+|+.++.+++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 567888899999999999994 458999999996432 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 82 YIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 9999999999963 456889999999999999999999999 99999999999999999999999999742210
Q ss_pred ------------------------------------------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHH
Q 011092 212 ------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249 (494)
Q Consensus 212 ------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ell 249 (494)
.....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 01246899999999999888999999999999999999
Q ss_pred hCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCC---ChHHHHHH
Q 011092 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVTA 312 (494)
Q Consensus 250 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~vl~~ 312 (494)
+|+.||................. .........++..+.+++.+|+ .+|.+|+ |+.+++..
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWET--TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCc--cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999876543222111111000 0011112245678889999977 5999999 88888863
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=313.32 Aligned_cols=248 Identities=22% Similarity=0.292 Sum_probs=201.3
Q ss_pred ccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+.+...||.|+||.||+|.+.. ...||||.++..... ....|.+|+.++.+++||||+++++++...+..++|||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 3455666999999999999642 358999998754422 24578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
|+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 86 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 86 YMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred cCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 99999999998642 347899999999999999999999999 9999999999999999999999999988764211
Q ss_pred ---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 214 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+................ ....+...+..+.
T Consensus 164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~ 238 (266)
T cd05033 164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-----RLPPPMDCPSALY 238 (266)
T ss_pred eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHH
Confidence 1233578999999998889999999999999999998 887775443322222111111 1112334567899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+++.+||+.+|.+||++.++++.|+.+
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=315.15 Aligned_cols=254 Identities=18% Similarity=0.235 Sum_probs=205.7
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+.+++.+.||.|++|.||++. ..++..|+||.+...... ....|.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 345667778999999999999 457899999988653322 2457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 136 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988632 2356899999999999999999999999 999999999999999999999999988755432
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+.......... ...+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH--hhhhhcCCCCCCCcccccHHHH
Confidence 23467889999999988889999999999999999999998875433221110 0011111111112234667899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+++.+||..+|++|||+.+|++.++.+
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=329.21 Aligned_cols=241 Identities=20% Similarity=0.253 Sum_probs=195.6
Q ss_pred ccccccCCCCCCCeEEEEEE----cCCCEEEEEEecCCC----CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 62 ENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
+++++.||+|+||.||+++. .+++.||+|++.... ....+.+..|+.++..+ +||||+++++++..++..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 55778889999999999884 357899999996432 12245678899999999 5999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 99999999999999863 456999999999999999999999999 999999999999999999999999998754321
Q ss_pred -----CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccccccccccCCCCc
Q 011092 213 -----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEGQFTD 282 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 282 (494)
....||+.|+|||++.+.. ++.++|||||||++|||+||+.||..... ..+...... .....+.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~------~~~~~~~ 232 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK------CDPPFPS 232 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc------CCCCCCC
Confidence 2356899999999998654 78899999999999999999998853211 111111110 1112344
Q ss_pred hhHHHHHHHHHHHccCCCCCCC-----ChHHHHH
Q 011092 283 DDGTELVRLASRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
..+..+.+++.+||+.||++|| ++.++++
T Consensus 233 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 233 FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 5667899999999999999999 6667775
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.92 Aligned_cols=248 Identities=20% Similarity=0.257 Sum_probs=205.4
Q ss_pred cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+-...+.+++.+|.|++|.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++.+..+...++||
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 3345677888889999999999994 568999999998766555678899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||++|++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 97 EYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred cccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 9999999999985 346899999999999999999999999 999999999999999999999999988754322
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||............. .........+...+..+.++
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l 249 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDF 249 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh---cCCCCCCCCccccCHHHHHH
Confidence 23467889999999988888999999999999999999999886543211111000 01111112234456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||..+|++|||+.+++.
T Consensus 250 i~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 250 LNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHHCcCCcccCcCHHHHhh
Confidence 99999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=325.91 Aligned_cols=253 Identities=22% Similarity=0.325 Sum_probs=199.6
Q ss_pred cccccccCCCCCCCeEEEEEE-c-----CCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecC-Ccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-E-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-DER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~-~~~ 131 (494)
.+++++.||.|+||.||+|.. . +++.||+|+++..... ..+.+.+|+.++.++ +||||++++++|... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 466778889999999999973 2 2478999999754322 235678899999999 899999999988654 567
Q ss_pred ceeeecCCCCCHHHHhcccC-----------------------------------------------------------C
Q 011092 132 LLVAEYMPNETLAKHLFHWE-----------------------------------------------------------T 152 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~-----------------------------------------------------------~ 152 (494)
+++|||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999885321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC------CccccCCCcCCCcC
Q 011092 153 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEY 226 (494)
Q Consensus 153 ~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~ 226 (494)
.++++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++...... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 26889999999999999999999999 999999999999999999999999998765322 12344678999999
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCC
Q 011092 227 LRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305 (494)
Q Consensus 227 ~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 305 (494)
+.+..++.++|||||||+++||++ |..||............... ......+...+.++.+++.+||+.+|.+||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE----GTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc----cCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 998999999999999999999998 88777542211110000000 0011123345578999999999999999999
Q ss_pred hHHHHHHhccccc
Q 011092 306 PKSLVTALSPLQK 318 (494)
Q Consensus 306 ~~~vl~~L~~~~~ 318 (494)
+.++++.|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-41 Score=328.92 Aligned_cols=246 Identities=20% Similarity=0.304 Sum_probs=192.3
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~l 133 (494)
+++.+.||+|+||.||+|.. .+|..||||.+.... ......+.+|+.+++.++||||+++++++...+ ..|+
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 45677889999999999994 468999999987432 223457889999999999999999999886532 4799
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+. ++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 82 VFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 999995 78998886 3456999999999999999999999999 999999999999999999999999998754321
Q ss_pred ------CccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh-------------------h
Q 011092 213 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-------------------D 265 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~-------------------~ 265 (494)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||......... .
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 23468899999999865 56899999999999999999999888653211100 0
Q ss_pred ccc----ccccc--ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 266 RNL----QMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 266 ~~~----~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... ..+.. +..........+..+.+++.+||+.||.+|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 00000 00000001134567899999999999999999999997
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=316.86 Aligned_cols=239 Identities=23% Similarity=0.373 Sum_probs=190.3
Q ss_pred cCCCCCCCeEEEEEEcC-------------------------CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccE
Q 011092 67 EHGEKAPNVVYKGKLEN-------------------------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNL 121 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 121 (494)
.||+|+||.||+|.... ...|++|.+..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 47999999999998421 14689999865443334578899999999999999999
Q ss_pred EEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-----
Q 011092 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----- 196 (494)
Q Consensus 122 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~----- 196 (494)
++++..++..++||||+++++|..++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999998864 3456899999999999999999999999 99999999999997644
Q ss_pred --CeEEcccCCcccCCCCCccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHH-hCCCCCCCchhHHhhhccccccc
Q 011092 197 --NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLL-SGKHIPPSHALDLIRDRNLQMLT 272 (494)
Q Consensus 197 --~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~ell-tg~~p~~~~~~~~~~~~~~~~~~ 272 (494)
.+|++|||++..........++..|+|||.+.+ ..++.++||||||+++|||+ +|..|+........... ...
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~-- 236 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEK-- 236 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHh--
Confidence 389999998865544445567889999998875 45789999999999999995 67777654322211110 000
Q ss_pred cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
....+......+.+++.+||+.+|.+|||+.++++.|.
T Consensus 237 ----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 237 ----KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ----ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 01122233467999999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=341.44 Aligned_cols=246 Identities=18% Similarity=0.223 Sum_probs=201.6
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCC--------
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-------- 129 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-------- 129 (494)
.|.+.+.||+|+||+||++. ..+|+.||||++...... ....+.+|+.++..++|+||++++..+...+
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~ 112 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVL 112 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccce
Confidence 55666777999999999999 556999999999754322 2456889999999999999999988775432
Q ss_pred ccceeeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 130 ERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 113 ~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 113 MIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred EEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 257999999999999988642 2357899999999999999999999999 9999999999999999999999999987
Q ss_pred cCCC------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 208 NSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 208 ~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+......... ...+
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~-----~~~~ 266 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY-----DPLP 266 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-----CCCC
Confidence 5432 2345689999999999988899999999999999999999999876544333222211111 1234
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
...+.++.+++.+||+.||.+||++.+++..
T Consensus 267 ~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 267 PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 4566889999999999999999999999863
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=326.65 Aligned_cols=232 Identities=21% Similarity=0.246 Sum_probs=190.2
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHH-HHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||+||+|.. .+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 469999999999995 4689999999965321 12345556655 467789999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 99998863 457899999999999999999999999 99999999999999999999999999875322 223468
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|..||................ ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHhh
Confidence 999999999998889999999999999999999999987654333222221111 11233456789999999999
Q ss_pred CCCCCCCChH
Q 011092 298 YEPRERPNPK 307 (494)
Q Consensus 298 ~dp~~Rps~~ 307 (494)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (323)
T cd05575 233 KDRTKRLGAK 242 (323)
T ss_pred cCHHhCCCCC
Confidence 9999999885
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=311.15 Aligned_cols=244 Identities=19% Similarity=0.277 Sum_probs=202.9
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+...||+|++|.||++.. .++..|++|.+..... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 34556679999999999995 4689999999865432 23567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----c
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 214 (494)
+|++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++...... .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 9999999997644567999999999999999999999999 9999999999999999999999999987654332 3
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+++.|+|||++.+..++.++|+||||+++++|++|+.|+................ ....+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-----FPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCccccCHHHHHHHHH
Confidence 457889999999998889999999999999999999999886554322222111111 112233456789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.+|++||++.++++
T Consensus 236 ~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 236 CLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HccCCcccCcCHHHHhh
Confidence 99999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-41 Score=334.86 Aligned_cols=244 Identities=18% Similarity=0.185 Sum_probs=194.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.+++.||+|+||+||+|.. .+++.||+|++..... .....+.+|+.++++++||||+++++++..++..++||||
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~ 82 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 82 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence 55778889999999999994 5688999999965321 1245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC------
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 211 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 211 (494)
++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 83 ~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 83 IPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 999999999863 356899999999999999999999999 99999999999999999999999999742210
Q ss_pred ---------------------------------------------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHH
Q 011092 212 ---------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 246 (494)
Q Consensus 212 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ 246 (494)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 01235889999999999888999999999999999
Q ss_pred HHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCC---hHHHHH
Q 011092 247 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 311 (494)
Q Consensus 247 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~vl~ 311 (494)
||++|+.||.................. .........++++.+++.+|+ .+|.+|++ +.+++.
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTS--LHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCC--cCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999998754322211111110000 000111234578888888876 59999987 777764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=320.39 Aligned_cols=256 Identities=22% Similarity=0.296 Sum_probs=202.6
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCC--EEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
+.++.+.+.||+|+||.||+|... ++. .+++|.++.... .....|.+|+.++.++ +||||+++++++..++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 445667778899999999999953 454 457887764332 2245788999999999 89999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeE
Q 011092 134 VAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~k 199 (494)
||||+++++|.+++.... ...+++..++.++.||+.||+|||+.+ ++||||||+|||++.++.+|
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEE
Confidence 999999999999986421 135789999999999999999999999 99999999999999999999
Q ss_pred EcccCCcccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccccccc
Q 011092 200 LSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSC 275 (494)
Q Consensus 200 l~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 275 (494)
|+|||++...... .....+..|+|||++.+..++.++||||||++++||+| |..||.............. .
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~ 239 (303)
T cd05088 165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----G 239 (303)
T ss_pred eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-----C
Confidence 9999998643211 11223567999999988889999999999999999998 8887754332222111111 1
Q ss_pred ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 276 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 276 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
.....+...+..+.+++.+||+.+|++||++.+++..|..+....
T Consensus 240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111223345678999999999999999999999999998776543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=315.73 Aligned_cols=240 Identities=24% Similarity=0.360 Sum_probs=193.3
Q ss_pred cCCCCCCCeEEEEEEcC-C-------CEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 67 EHGEKAPNVVYKGKLEN-Q-------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.||.|+||.||+|.... + ..|++|.+........+.|..|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 57999999999998532 2 348888886554444567899999999999999999999999989999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC--------eEEcccCCcccCC
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTFGLMKNSR 210 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~--------~kl~Dfgla~~~~ 210 (494)
++|+|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 999999999642 346899999999999999999999999 999999999999987765 6999999987766
Q ss_pred CCCccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 211 DGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 211 ~~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
......+++.|+|||++.+. .++.++||||||+++|+|++|..++.............. .....+.....++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE------DRHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH------ccccCCCCCcHHHH
Confidence 65666788999999999864 478999999999999999999644432211111000000 01123334457899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhc
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
+++.+||+.+|++|||++++++.|+
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=316.98 Aligned_cols=250 Identities=23% Similarity=0.329 Sum_probs=198.3
Q ss_pred cccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecC--Ccccee
Q 011092 63 NIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLV 134 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~lv 134 (494)
.+++.||.|+||+||++.. .++..||+|.++.... .....|.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5677889999999988652 3578999999976532 2356788999999999999999999998764 357899
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+++ ++||||||+|||+++++.++|+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999853 46999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH---Hhhhcc-------cccccccccc
Q 011092 214 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD---LIRDRN-------LQMLTDSCLE 277 (494)
Q Consensus 214 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~---~~~~~~-------~~~~~~~~~~ 277 (494)
...++..|+|||.+.+..++.++||||||+++++|+||..|+...... ...... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 123456799999998888999999999999999999999876432110 000000 0000011111
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
...+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 123445668999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=325.59 Aligned_cols=235 Identities=18% Similarity=0.260 Sum_probs=189.8
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||++.. .+++.||+|+++.... .....+..|+.++.++ +||||+++++++..++..++||||++++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 469999999999995 4588999999976422 2245677899888877 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-----hhhccccccccccccCCCCchhHHHHHHHH
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
|+.|+|||++.+..++.++|||||||++|+|++|+.||....... ........+.. ....+|...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHH
Confidence 999999999998889999999999999999999999884211000 00000000000 01124555668899999
Q ss_pred HHHccCCCCCCCCh
Q 011092 293 SRCLQYEPRERPNP 306 (494)
Q Consensus 293 ~~cl~~dp~~Rps~ 306 (494)
.+||+.||.+||++
T Consensus 237 ~~~L~~dP~~R~~~ 250 (329)
T cd05618 237 KSFLNKDPKERLGC 250 (329)
T ss_pred HHHhcCCHHHcCCC
Confidence 99999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=314.54 Aligned_cols=251 Identities=17% Similarity=0.228 Sum_probs=198.2
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCC----EEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++++++.||.|+||+||+|.. .++. .|++|.+...... ...++..|+.++.++.||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 455677889999999999995 3454 4778887543322 23567788889999999999999998864 557899
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
+||+++|+|.+++.. ....+++..+..|+.||+.||.|||+++ ++||||||+|||+++++.+||+|||+++.....
T Consensus 87 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 87 TQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 999999999999964 2457899999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 213 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
....++..|++||.+.++.++.++||||||+++|||+| |..|+.+............ ......+...+..
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 239 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK-----GERLAQPQICTID 239 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-----CCcCCCCCCCCHH
Confidence 12345678999999998889999999999999999998 8888765432221111100 0011112234467
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+..++.+||..+|.+|||+.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 89999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=310.29 Aligned_cols=247 Identities=22% Similarity=0.323 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
.+++.+.||+|++|.||++...++..||+|.+.... ...+.|.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 356667789999999999997776789999986543 23567899999999999999999999885 4568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----cc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 215 (494)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 99999997544456899999999999999999999999 9999999999999999999999999987553321 22
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.++..|+|||...+..++.++||||||+++|+|+| |..|+................ ....+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-----RMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----CCCCCcccCHHHHHHHHH
Confidence 34678999999988889999999999999999999 777776543322222111111 112234566889999999
Q ss_pred HccCCCCCCCChHHHHHHhcc
Q 011092 295 CLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~ 315 (494)
||..+|.+||++.++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=309.97 Aligned_cols=248 Identities=26% Similarity=0.385 Sum_probs=205.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
++++...+|.|+||.||+|... |+.||+|.++.... ..+++.+|+.+++.++|+||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4556677799999999999864 78999999976543 467899999999999999999999999988899999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-ccccCC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNL 219 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~t~ 219 (494)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.++...... ....+.
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 163 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV 163 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcc
Confidence 99999997544457999999999999999999999999 9999999999999999999999999988664332 223456
Q ss_pred CcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC
Q 011092 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298 (494)
Q Consensus 220 ~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 298 (494)
.|+|||++.+..++.++||||||+++++|++ |..|+............... .....+...+..+.+++.+||..
T Consensus 164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~ 238 (256)
T cd05039 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-----YRMEAPEGCPPEVYKVMKDCWEL 238 (256)
T ss_pred cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-----CCCCCccCCCHHHHHHHHHHhcc
Confidence 7999999988889999999999999999997 88777654433322211111 11122344568899999999999
Q ss_pred CCCCCCChHHHHHHhccc
Q 011092 299 EPRERPNPKSLVTALSPL 316 (494)
Q Consensus 299 dp~~Rps~~~vl~~L~~~ 316 (494)
+|.+|||+.++++.|+.+
T Consensus 239 ~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 239 DPAKRPTFKQLREQLALI 256 (256)
T ss_pred ChhhCcCHHHHHHHHhcC
Confidence 999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=316.39 Aligned_cols=254 Identities=20% Similarity=0.298 Sum_probs=199.5
Q ss_pred cccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
.+++++.||+|+||.||++.. .++..||+|.+........+.|.+|++++.+++||||+++++++... ...++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 456778889999999999974 24789999999765544466789999999999999999999987543 45789
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||++++++.+||+|||++.......
T Consensus 85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999999864 2346899999999999999999999999 9999999999999999999999999988654322
Q ss_pred c-------cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh---ccc--------ccccccc
Q 011092 214 S-------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNL--------QMLTDSC 275 (494)
Q Consensus 214 ~-------~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~---~~~--------~~~~~~~ 275 (494)
. ..++..|+|||++.+..++.++||||||++++||++|..++.......... ... .......
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 122346999999988889999999999999999999876543221111100 000 0000001
Q ss_pred ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 276 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 276 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
.....+...+..+.+|+.+||+.+|++|||+.+++..|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11112344567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-40 Score=307.78 Aligned_cols=241 Identities=25% Similarity=0.404 Sum_probs=198.8
Q ss_pred cCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHH
Q 011092 67 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 145 (494)
.||.|+||.||+|...++..||+|.+....... ...|.+|++++..++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 469999999999998788999999987654222 3468899999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----ccccCCC
Q 011092 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLA 220 (494)
Q Consensus 146 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~ 220 (494)
++.. ....+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.+||+|||++....... ...+++.
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 8864 2346889999999999999999999999 9999999999999999999999999987543321 2233567
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (494)
|+|||++.+..++.++||||||+++|++++ |..||............... .....+...+..+.+++.+||+.+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-----YRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999988889999999999999999998 88787654332222111111 111234456688999999999999
Q ss_pred CCCCCChHHHHHHhc
Q 011092 300 PRERPNPKSLVTALS 314 (494)
Q Consensus 300 p~~Rps~~~vl~~L~ 314 (494)
|++||++.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=329.89 Aligned_cols=247 Identities=17% Similarity=0.180 Sum_probs=197.8
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+++++.||+|+||.||++... +++.||+|++.... ......+.+|+.+++.++||||+++++++..++..++||
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM 122 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46777888899999999999954 58899999986421 123456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||++||+|.+++. ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++......
T Consensus 123 Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 123 EYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred cCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 9999999999985 346889999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCCCcCCCcCCCCCC----CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.....................+ .....+.
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~s~ 276 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFP--EDVEISK 276 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCC--CcccCCH
Confidence 2456899999999987533 7889999999999999999999987654322222111111000011 1123467
Q ss_pred HHHHHHHHHccCCCCC--CCChHHHHHH
Q 011092 287 ELVRLASRCLQYEPRE--RPNPKSLVTA 312 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~--Rps~~~vl~~ 312 (494)
.+.+++..||..++.+ |+|+.++++.
T Consensus 277 ~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 277 HAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 8999999999866554 8899999873
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=317.23 Aligned_cols=254 Identities=21% Similarity=0.272 Sum_probs=202.9
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCC--EEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv 134 (494)
+++.+.+.||.|+||.||+|... ++. .+++|.++.... ...+.|.+|+.++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 45667778899999999999854 343 578888874322 2245789999999999 799999999999999999999
Q ss_pred eecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEE
Q 011092 135 AEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 200 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 200 (494)
|||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEEE
Confidence 99999999999986421 135889999999999999999999999 999999999999999999999
Q ss_pred cccCCcccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccc
Q 011092 201 STFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 276 (494)
Q Consensus 201 ~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||............... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~-----~ 235 (297)
T cd05089 161 ADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-----Y 235 (297)
T ss_pred CCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----C
Confidence 999998643221 11223457999999988889999999999999999998 88887654433222211111 1
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
....+..++..+.+|+.+||+.+|.+|||+.++++.|+.+...
T Consensus 236 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 236 RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1122344567899999999999999999999999999877654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=326.76 Aligned_cols=235 Identities=18% Similarity=0.210 Sum_probs=191.5
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHH-HHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||+||++.. .+|+.||+|++.... ......+..|.. +++.++||||+++++++..++..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 469999999999994 568999999996532 122345566655 467789999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|..++. ....+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 9998886 3467999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|..||.......+........ ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP------LVLRPGASLTAWSILEELLE 232 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC------ccCCCCCCHHHHHHHHHHhc
Confidence 999999999998889999999999999999999999987654333322221111 11223455789999999999
Q ss_pred CCCCCCCChHHHH
Q 011092 298 YEPRERPNPKSLV 310 (494)
Q Consensus 298 ~dp~~Rps~~~vl 310 (494)
.+|.+||++.+.+
T Consensus 233 ~~p~~R~~~~~~~ 245 (325)
T cd05604 233 KDRQRRLGAKEDF 245 (325)
T ss_pred cCHHhcCCCCCCH
Confidence 9999999886433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=314.84 Aligned_cols=247 Identities=21% Similarity=0.333 Sum_probs=197.2
Q ss_pred ccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+++.+.||.|+||.||+|... .+..||||++..... .....|.+|+.+++.++||||+++++++..+...++|
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 87 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 87 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEE
Confidence 456677799999999998743 246799999865332 2245688999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 135 AEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999986421 124678889999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCC
Q 011092 207 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 207 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (494)
+...... ...+++.|+|||++.+..++.++||||||+++|||++ |..|+............... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~~ 241 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GLLD 241 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcCC
Confidence 7543221 2234678999999998889999999999999999999 56676544332222111110 0112
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.+...+..+.+++.+||+.+|.+|||+.+++..|+
T Consensus 242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 242 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 23445678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=309.39 Aligned_cols=248 Identities=25% Similarity=0.377 Sum_probs=205.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
++.+.+.||.|+||.||+|...++..||||.+.... ...+.+.+|+.++++++||||+++++++......++||||+++
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK 85 (261)
T ss_pred heeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence 455667789999999999998778899999997544 3467899999999999999999999999988899999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----cc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 215 (494)
++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 86 ~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 164 (261)
T cd05034 86 GSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA 164 (261)
T ss_pred CCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhcc
Confidence 99999997644467999999999999999999999999 9999999999999999999999999987654321 22
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+..|+|||.+.+..++.++||||||+++++|+| |+.||................ ....+...+..+.+++.+
T Consensus 165 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~ 239 (261)
T cd05034 165 KFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-----RMPRPPNCPEELYDLMLQ 239 (261)
T ss_pred CCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHHH
Confidence 34568999999998889999999999999999999 888876543222221111111 111233446789999999
Q ss_pred HccCCCCCCCChHHHHHHhcc
Q 011092 295 CLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~ 315 (494)
||..+|.+||++.++++.|+.
T Consensus 240 ~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 240 CWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HcccCcccCCCHHHHHHHHhc
Confidence 999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=320.24 Aligned_cols=246 Identities=24% Similarity=0.340 Sum_probs=205.7
Q ss_pred cccCCCCCCCeEEEEEEcC---C--CEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 65 VSEHGEKAPNVVYKGKLEN---Q--RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~---~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
-+.||.|-||.||+|...+ | -.||||.-+.+.. .+.+.|+.|..+++.++|||||+++|+|.+ ...|||||.+
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~ 472 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELA 472 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecc
Confidence 3567999999999999432 3 3689999987543 347789999999999999999999999976 4689999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcccc-
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST- 217 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~- 217 (494)
+.|.|..+|.. +...++......++.||+.||.|||++. +|||||-..|||+...-.+||+|||+++...+...+..
T Consensus 473 ~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS 550 (974)
T KOG4257|consen 473 PLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS 550 (974)
T ss_pred cchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence 99999999975 3456888999999999999999999998 99999999999999999999999999998776644332
Q ss_pred ----CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 218 ----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 218 ----t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
.+.|||||.+....+|.+||||-|||++||++. |..||.+-. ................|+.+|+.++.|+
T Consensus 551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk-----NsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK-----NSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc-----ccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 478999999999999999999999999999887 777876532 2222222222333345778889999999
Q ss_pred HHHccCCCCCCCChHHHHHHhccccc
Q 011092 293 SRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+||..+|.+||++.++...|..+..
T Consensus 626 skcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999988876543
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=320.70 Aligned_cols=245 Identities=20% Similarity=0.215 Sum_probs=209.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC---ChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.|++.+.||.|.||+||+++.. +|+.+|+|++.+.... +...+.+|+.+|+++. |||||.+++++...+..++||
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm 115 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM 115 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence 4666678899999999999954 5999999999765443 3458899999999997 999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC----CCCeEEcccCCcccCCC
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~----~~~~kl~Dfgla~~~~~ 211 (494)
|++.||.|.+.+... .+++.....++.||+.++.|||+.| ++||||||+|+|+.. ++.+|++|||++.....
T Consensus 116 EL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999754 3999999999999999999999999 999999999999953 35799999999988766
Q ss_pred C---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 212 G---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 212 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
. ...+||+.|+|||++...+++..+||||+||++|.|++|..||................. ..........+..+
T Consensus 192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~a 269 (382)
T KOG0032|consen 192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISESA 269 (382)
T ss_pred CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHHH
Confidence 3 356899999999999999999999999999999999999999987764433332211111 22333445667899
Q ss_pred HHHHHHHccCCCCCCCChHHHHH
Q 011092 289 VRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+++..||..||..|+|+.++++
T Consensus 270 kd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 270 KDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHHHHhcccCcccCCCHHHHhc
Confidence 99999999999999999999999
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=324.80 Aligned_cols=235 Identities=20% Similarity=0.231 Sum_probs=190.5
Q ss_pred cCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHH-HHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||+||++... +++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 4699999999999954 578999999965321 12334455544 567789999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|.+++.. ...+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 99998863 456888899999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|+|++|..||............... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998765433222211111 112233556789999999999
Q ss_pred CCCCCCCChHHHH
Q 011092 298 YEPRERPNPKSLV 310 (494)
Q Consensus 298 ~dp~~Rps~~~vl 310 (494)
.||.+||++.+.+
T Consensus 233 ~~p~~R~~~~~~~ 245 (325)
T cd05602 233 KDRTKRLGAKDDF 245 (325)
T ss_pred cCHHHCCCCCCCH
Confidence 9999999887544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=308.97 Aligned_cols=242 Identities=20% Similarity=0.266 Sum_probs=195.1
Q ss_pred cCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||+|.+. .+..||+|.+...... ..+.|.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3799999999999853 3557999999765322 2467899999999999999999999885 457899999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc-------c
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------Y 215 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-------~ 215 (494)
|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++........ .
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 2457899999999999999999999999 99999999999999999999999999875433211 1
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+.......+....... .....+...+.++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG-----KRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHHHH
Confidence 22468999999988889999999999999999996 88887543322211111111 1122344556899999999
Q ss_pred HccCCCCCCCChHHHHHHhccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
||..+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=316.38 Aligned_cols=256 Identities=17% Similarity=0.201 Sum_probs=206.3
Q ss_pred HHHHHhcCCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCC
Q 011092 51 QLKNATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129 (494)
Q Consensus 51 ~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 129 (494)
++.......+.+++++.||.|+||.||+|... ++..|++|.+........+.+.+|+.+++.++||||+++++++..++
T Consensus 3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 82 (292)
T cd06644 3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG 82 (292)
T ss_pred hhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence 45555556677889999999999999999954 58999999997655444667889999999999999999999999999
Q ss_pred ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
..++||||+++++|..++.. ....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++...
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred eEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999888754 2356899999999999999999999999 999999999999999999999999987653
Q ss_pred CCC----CccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCC
Q 011092 210 RDG----KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 210 ~~~----~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (494)
... ....+++.|+|||++. ...++.++|||||||++|+|++|..|+................ ......
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~ 237 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---PPTLSQ 237 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC---CccCCC
Confidence 322 2345788999999985 3346889999999999999999998875432211111111100 011112
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+...+.++.+++.+||+.+|++||++.++++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 238 PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 3345678999999999999999999999986
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=319.63 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=202.9
Q ss_pred cccccccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCC-CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 130 (494)
.+.+...||.|+||.||++... ++..||+|.+.... ......+.+|+.++..+ +||||+++++++...+.
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 95 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCc
Confidence 4556678899999999999731 24579999987543 22356789999999999 89999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~ 196 (494)
.++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~ 174 (304)
T cd05101 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENN 174 (304)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCC
Confidence 999999999999999987432 135788899999999999999999999 99999999999999999
Q ss_pred CeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccc
Q 011092 197 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 269 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 269 (494)
.+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+.......+......
T Consensus 175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 254 (304)
T cd05101 175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 254 (304)
T ss_pred cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc
Confidence 99999999987654321 2234578999999988889999999999999999998 6666655433332221111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
. .....+...+..+.+++.+||+.+|.+|||+.++++.|+.+..
T Consensus 255 ~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 255 G-----HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred C-----CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 1 1112234556889999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=323.22 Aligned_cols=232 Identities=21% Similarity=0.245 Sum_probs=189.7
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHH-HHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||.|+||.||+|+. .++..||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 469999999999995 4589999999965321 12344556654 578889999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 9998886 3456889999999999999999999999 99999999999999999999999999875322 223568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
|+.|+|||++.+..++.++|||||||++|||++|..||............... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 89999999999888999999999999999999999998765433332222111 112344556789999999999
Q ss_pred CCCCCCCChH
Q 011092 298 YEPRERPNPK 307 (494)
Q Consensus 298 ~dp~~Rps~~ 307 (494)
.||.+||+..
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=330.54 Aligned_cols=245 Identities=13% Similarity=0.130 Sum_probs=195.8
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++++++.||+|+||.||++.. .+++.||||++.... ......+..|+.++..++||||+++++.+...+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 355677789999999999995 468999999996432 2235568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++||+|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 9999999999863 456899999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCC
Q 011092 213 -----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 257 (494)
Q Consensus 213 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~ 257 (494)
....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 124689999999999988899999999999999999999999876
Q ss_pred chhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCC---hHHHHH
Q 011092 258 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 311 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~vl~ 311 (494)
...................+. ....+.++.+++.+++. ||.+|++ +.+++.
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPP--EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCHHHHHHHHHcCCCceecCC--CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 543332222111100000111 11245788999999874 9999985 556654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=309.39 Aligned_cols=246 Identities=21% Similarity=0.247 Sum_probs=189.9
Q ss_pred cCCCCCCCeEEEEEEcC---CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||+|...+ +..+|+|.++..... ....|.+|+.++++++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 57999999999998543 457999998764422 23578899999999999999999999999889999999999999
Q ss_pred HHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC------C
Q 011092 143 LAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------K 213 (494)
Q Consensus 143 L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~ 213 (494)
|.+++.... ....++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence 999986422 234667788899999999999999999 999999999999999999999999998754322 1
Q ss_pred ccccCCCcCCCcCCCCC-------CCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 214 SYSTNLAFTPPEYLRTG-------RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~-------~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...++..|+|||++.+. .++.++||||||+++|||++ |..||.............................+
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLS 240 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCC
Confidence 23456789999998642 35789999999999999996 98887543222211111111000111111222345
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
..+.+++..|| .+|.+|||+.+|+..|.
T Consensus 241 ~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 241 DRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 77899999999 68999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=316.23 Aligned_cols=250 Identities=23% Similarity=0.311 Sum_probs=201.9
Q ss_pred ccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
++++..||+|+||.||++... ....||+|.+..... .....+.+|++++.++ +||||+++++++..++..++
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 93 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV 93 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence 456677799999999999853 236899999875432 2245688999999999 89999999999999999999
Q ss_pred eeecCCCCCHHHHhccc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeE
Q 011092 134 VAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~k 199 (494)
+|||+++++|.+++... ....+++..++.++.|++.||.|||+++ |+||||||+||++++++.+|
T Consensus 94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEE
Confidence 99999999999998632 2356889999999999999999999999 99999999999999999999
Q ss_pred EcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccc
Q 011092 200 LSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLT 272 (494)
Q Consensus 200 l~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 272 (494)
|+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..|++..............
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-- 250 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-- 250 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC--
Confidence 99999987654321 1234568999999988889999999999999999998 87777654332222211111
Q ss_pred cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.....+...+..+.+|+.+||..+|++|||+.++++.|+.+.
T Consensus 251 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 251 ---YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ---CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111233445678999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=317.20 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=206.7
Q ss_pred HhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 55 ATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 55 ~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
..+....+.+++.||.|++|.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++++..++..++
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 334446677888899999999999994 5689999999987655556778899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++......
T Consensus 94 v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 94 VMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred eecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999999985 356899999999999999999999999 999999999999999999999999998754332
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....+++.|+|||.+.+..++.++||||||+++|+|++|..||.......... ............+...+..+.
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPERLSAVFR 246 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCCCCCCCccccCHHHH
Confidence 23457889999999998889999999999999999999998885432211100 000111111123345567899
Q ss_pred HHHHHHccCCCCCCCChHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+++.+||+.+|.+||++.+++.
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhc
Confidence 9999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=310.16 Aligned_cols=245 Identities=16% Similarity=0.207 Sum_probs=203.2
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++++.||.|+||.||++.. .++..||+|.++... ....+.+..|+.+++.++||||+++++++..++..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 45677889999999999995 468999999986432 2335678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
+++|.+++.......+++.....++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++...... ...
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 999999886544567899999999999999999999999 999999999999999999999999998765432 235
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.+++.|+|||++.+..++.++|+||||+++|+|++|..||................ ....+...+..+.+++.+|
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~ 235 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-----YKPLPSHYSYELRSLIKQM 235 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC-----CCCCCcccCHHHHHHHHHH
Confidence 67889999999988889999999999999999999999987554322221111111 1112334567899999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011092 296 LQYEPRERPNPKSLVTA 312 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~ 312 (494)
|+.||.+|||+.+++..
T Consensus 236 l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 236 FKRNPRSRPSATTILSR 252 (255)
T ss_pred HhCCcccCCCHHHHhhc
Confidence 99999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=335.58 Aligned_cols=251 Identities=18% Similarity=0.184 Sum_probs=206.3
Q ss_pred cccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEE-ec---CC---cc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCC-CE---GD---ER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~-~~---~~---~~ 131 (494)
..++.+.|.+|+|+.||+|.... |..||+|++-..+....+...+||++|++|+ |+|||.+++.. .. .+ .+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 45566777999999999999655 4999999998776666788999999999995 99999999932 22 11 36
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
+|.||||.||+|-+++..+....|++.++++|+.++++|+++||... +|||||||-+||||+.+|..||||||-+....
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 79999999999999998766677999999999999999999999976 59999999999999999999999999876322
Q ss_pred CCC-------------ccccCCCcCCCcCC---CCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc
Q 011092 211 DGK-------------SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 274 (494)
Q Consensus 211 ~~~-------------~~~~t~~y~aPE~~---~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 274 (494)
... ....|+.|+|||++ .+.+.++|+|||+|||+||-|+....||.......+..+.+.-.
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P--- 274 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFP--- 274 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCC---
Confidence 111 12468999999987 46679999999999999999999999997664433333332211
Q ss_pred cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 275 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
..+..+..+.+||..||+.||.+||+.-+|+..+-.+...
T Consensus 275 -----~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 275 -----PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -----CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 1236778999999999999999999999999888665443
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=327.21 Aligned_cols=246 Identities=17% Similarity=0.162 Sum_probs=198.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.+++.||+|+||.||++.. .+|+.||+|+++.... ...+.+.+|+.++..++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 355667779999999999995 4689999999975322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
|++||+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999999642 357999999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccCCCcCCCcCCC------CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 214 --SYSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~------~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...+|+.|+|||++. ...++.++|||||||++|+|++|+.||..................... ......+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKF--PEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCC--CCCCCCC
Confidence 235789999999986 455789999999999999999999998654332221111111000000 0112356
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+++.+||. +|.+|||+.+++.
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 789999999998 9999999999985
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=314.45 Aligned_cols=245 Identities=18% Similarity=0.246 Sum_probs=197.7
Q ss_pred ccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 64 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
..+.||.|+||+||++.. .+++.||+|.+...... ....+.+|+++++.++|+||+.+++++..++..++||||++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence 345569999999999995 46899999998654322 23457889999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Cccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 216 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 216 (494)
+++|.+++......++++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++...... ....
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 162 (285)
T cd05632 84 GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRV 162 (285)
T ss_pred CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCC
Confidence 999998886544457999999999999999999999999 999999999999999999999999998654332 2346
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
++..|+|||++.+..++.++|+||||+++|+|++|..||................... ...++...+..+.+|+..||
T Consensus 163 g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l 240 (285)
T cd05632 163 GTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKMLL 240 (285)
T ss_pred CCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHHHc
Confidence 7899999999998889999999999999999999999886543221111111111111 11233445678999999999
Q ss_pred cCCCCCCCC-----hHHHHH
Q 011092 297 QYEPRERPN-----PKSLVT 311 (494)
Q Consensus 297 ~~dp~~Rps-----~~~vl~ 311 (494)
+.||.+||+ +.+++.
T Consensus 241 ~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 241 TKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cCCHhHcCCCcccChHHHHc
Confidence 999999999 556664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=322.10 Aligned_cols=235 Identities=17% Similarity=0.256 Sum_probs=192.9
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceeeec
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.++.||+|+||.||+|.. .+|+.||+|++.... ....+.+..|..++..+. |++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey 82 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY 82 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence 3456679999999999995 468999999997532 223456788999998885 57788899999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CC
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 213 (494)
++||+|.+++. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... ..
T Consensus 83 ~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 83 VNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 99999999886 3456999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ....+...+.++.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSICK 233 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHH
Confidence 456899999999999888999999999999999999999998765433222221111 11234455678999999
Q ss_pred HHccCCCCCCCCh
Q 011092 294 RCLQYEPRERPNP 306 (494)
Q Consensus 294 ~cl~~dp~~Rps~ 306 (494)
+||+.+|.+|++.
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05615 234 GLMTKHPSKRLGC 246 (323)
T ss_pred HHcccCHhhCCCC
Confidence 9999999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=308.30 Aligned_cols=242 Identities=21% Similarity=0.295 Sum_probs=197.7
Q ss_pred cCCCCCCCeEEEEEEcC--CC--EEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLEN--QR--RIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|++|.||+|.+.+ ++ .||||.+..... ...+.|.+|+.++++++||||+++++++.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 46999999999998533 33 699999987654 346689999999999999999999999988 8899999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-------Cc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KS 214 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------~~ 214 (494)
+|.+++.......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9999997533356899999999999999999999999 999999999999999999999999998765432 12
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..|+|||++.+..++.++||||||+++|+|++ |..|+............... ......+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE----GERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc----CCcCCCCccCCHHHHHHHH
Confidence 345678999999998889999999999999999999 88887543222211111110 0111123345678999999
Q ss_pred HHccCCCCCCCChHHHHHHhc
Q 011092 294 RCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~ 314 (494)
+||+.+|.+|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=327.42 Aligned_cols=253 Identities=17% Similarity=0.173 Sum_probs=199.5
Q ss_pred HhcCCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCc
Q 011092 55 ATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 55 ~~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 130 (494)
..-....+++++.||+|+||.||++... +++.||+|++.... ......+.+|+.++..++||||+++++++..++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3334456777888899999999999954 58899999986422 1224557889999999999999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 999999999999999985 345889999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-----CccccCCCcCCCcCCCCC----CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 211 DG-----KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 211 ~~-----~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
.. ....||+.|+|||++.+. .++.++|||||||++|||++|+.||..................... ...
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~ 271 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF--PDD 271 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccC--CCc
Confidence 32 245689999999998653 2788999999999999999999998765432222221111110001 112
Q ss_pred chhHHHHHHHHHHHccCCCCC--CCChHHHHHHh
Q 011092 282 DDDGTELVRLASRCLQYEPRE--RPNPKSLVTAL 313 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~--Rps~~~vl~~L 313 (494)
...+..+.+++..||..++.+ |+++.++++..
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 272 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 245688999999999844443 67888888743
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=315.83 Aligned_cols=245 Identities=18% Similarity=0.277 Sum_probs=198.4
Q ss_pred ccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 64 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
..+.||+|+||.||++.. .+++.||+|.+....... ...+..|+.++++++|+||+.+++.+...+..++||||++
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred eeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC
Confidence 345569999999999995 468999999987543222 3457889999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYS 216 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~~ 216 (494)
|++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...
T Consensus 84 g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 162 (285)
T cd05630 84 GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV 162 (285)
T ss_pred CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCC
Confidence 999999886544557999999999999999999999999 9999999999999999999999999987654332 346
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
|+..|+|||++.+..++.++||||||+++|+|++|..||.......... ........ .....+...+.++.+|+.+||
T Consensus 163 g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~li~~~l 240 (285)
T cd05630 163 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVKE-VQEEYSEKFSPDARSLCKMLL 240 (285)
T ss_pred CCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH-HHHhhhhh-hhhhcCccCCHHHHHHHHHHh
Confidence 7899999999998889999999999999999999999886532110000 00001000 111233445678999999999
Q ss_pred cCCCCCCCC-----hHHHHH
Q 011092 297 QYEPRERPN-----PKSLVT 311 (494)
Q Consensus 297 ~~dp~~Rps-----~~~vl~ 311 (494)
+.||.+||| +.++++
T Consensus 241 ~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 241 CKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hcCHHHccCCCCCchHHHHc
Confidence 999999999 788886
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-40 Score=317.61 Aligned_cols=253 Identities=21% Similarity=0.297 Sum_probs=203.8
Q ss_pred cccccccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 130 (494)
.+.+.+.||+|+||.||++... ++..||+|.++.... .....+..|+.++..+ +||||+++++++...+.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 4677788899999999999742 235799999976432 2345688899999999 89999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~ 196 (494)
.++||||+++++|.+++..... ..+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 177 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDN 177 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCC
Confidence 9999999999999999974321 34889999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccc
Q 011092 197 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 269 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 269 (494)
.+||+|||++....... ...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.......+......
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 257 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 257 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc
Confidence 99999999987554321 1223468999999988889999999999999999998 7777655433322221111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
. .....+...+.++.+++.+||..+|.+|||+.++++.|+.+...
T Consensus 258 ~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 258 G-----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred C-----CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1 11123345567899999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-40 Score=314.01 Aligned_cols=252 Identities=19% Similarity=0.326 Sum_probs=198.6
Q ss_pred ccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
+.+++.||+|+||.||++.. .++..||+|.++.... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 45677889999999999973 3478999999875432 2346789999999999999999999999875 56789
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
||||++|++|.+++.. ....+++..+..++.||+.||+|||+++ ++||||||+||+++.++.++|+|||++.......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999864 2346899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh-----------cccccccccc
Q 011092 214 -------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNLQMLTDSC 275 (494)
Q Consensus 214 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~-----------~~~~~~~~~~ 275 (494)
...++..|+|||++.+..++.++||||||+++|+|+|++.|........... .....+...
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG- 242 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC-
Confidence 2345678999999988889999999999999999999876542211100000 000000000
Q ss_pred ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 276 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 276 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
.....+...+..+.+|+.+||+.+|.+|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 01112344668899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=314.33 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=201.7
Q ss_pred ccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+++...||+|+||.||+|... ....|++|.+...... ....+.+|+.++..++||||+++++.+...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 345677799999999999842 2357899988754321 245788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee
Q 011092 135 AEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill 192 (494)
|||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEE
Confidence 99999999999875321 135788999999999999999999999 9999999999999
Q ss_pred cCCCCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhh
Q 011092 193 DEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRD 265 (494)
Q Consensus 193 ~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~ 265 (494)
++++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++++|+| |..|+.......+..
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 240 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 999999999999987543221 2234678999999988889999999999999999999 887776543332222
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 266 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.... ......+...+..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 241 ~~~~-----~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 241 LLKT-----GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHhC-----CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1111 11112244556789999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=313.45 Aligned_cols=245 Identities=16% Similarity=0.199 Sum_probs=199.0
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+++++.||.|+||.||++... ++..+++|.+........+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 467788999999999999954 5788999998765544466789999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 216 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 216 (494)
++|..++.. ...++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999988753 3457999999999999999999999999 999999999999999999999999998654322 2346
Q ss_pred cCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 217 TNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 217 ~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
++..|+|||++. +..++.++|||||||++|+|++|+.||................. .....+...+.++.++
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP---PTLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC---CCCCCccccCHHHHHH
Confidence 788999999984 34577899999999999999999988764322111111111100 0111233456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.+|.+||++.+++.
T Consensus 242 i~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999986
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=335.22 Aligned_cols=245 Identities=22% Similarity=0.278 Sum_probs=190.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC--------Ccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--------DER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--------~~~ 131 (494)
.+.+++.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++... ...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 467778889999999999995 468999999985432 3346799999999999999999887432 236
Q ss_pred ceeeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCccc
Q 011092 132 LLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKN 208 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~ 208 (494)
++||||++ ++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.
T Consensus 143 ~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 68999998 5787776532 3467999999999999999999999999 9999999999999965 4799999999986
Q ss_pred CCCC---CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc---------------
Q 011092 209 SRDG---KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------- 269 (494)
Q Consensus 209 ~~~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~--------------- 269 (494)
.... ....+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+............
T Consensus 221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~ 300 (440)
T PTZ00036 221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNP 300 (440)
T ss_pred ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhch
Confidence 5432 345678999999998764 589999999999999999999988865432111000000
Q ss_pred --------ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 --------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 --------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
......+...++...+.++.+|+.+||+.||.+|||+.+++.
T Consensus 301 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 301 NYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred hhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000001111233345678999999999999999999999985
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=327.84 Aligned_cols=251 Identities=18% Similarity=0.208 Sum_probs=205.5
Q ss_pred hcCCccccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 56 TSGFAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 56 ~~~~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.+.-+..++|+.||.|+||.||+|+.++ +-.-|.|++........+.|+-|++||..++||+||+|++.|...+.+|++
T Consensus 28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence 3333456899999999999999999544 556678888766666688899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR---- 210 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 210 (494)
.|||.||-.+.++.. -+++++++++..+++|++.||.|||+++ |||||||..|||++-+|.++|+|||.+....
T Consensus 108 iEFC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q 185 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ 185 (1187)
T ss_pred EeecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence 999999999888865 3578999999999999999999999998 9999999999999999999999999865432
Q ss_pred CCCccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 211 DGKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 211 ~~~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...++.||+.|||||+.. ..+|+.++||||||++|.||..+.+|-..-..-.+.-..... .++ ....|...+
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS-ePP--TLlqPS~Ws 262 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPP--TLLQPSHWS 262 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc-CCC--cccCcchhh
Confidence 235789999999999864 467999999999999999999998664332211111111110 111 112356677
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+|+.+||.+||..||++.++++
T Consensus 263 ~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 263 RSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 89999999999999999999999986
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=311.87 Aligned_cols=248 Identities=22% Similarity=0.357 Sum_probs=200.8
Q ss_pred cccccccCCCCCCCeEEEEEEcC------CCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
++.+++.||.|+||.||+|.... +..||+|.+..... .....+.+|+.++..++||||+++++++...+..++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~ 86 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV 86 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence 45667888999999999998532 36899999865432 224578899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCC
Q 011092 134 VAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~ 165 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCccc
Confidence 999999999999986422 124788899999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccC
Q 011092 206 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 206 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
++..... ....++..|+|||.+.+..++.++||||||+++|||+| |..|+.............. ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~ 240 (277)
T cd05032 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID-----GGHL 240 (277)
T ss_pred chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc-----CCCC
Confidence 8754332 22345678999999988889999999999999999998 8777754432222211110 0111
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
..+...+..+.+++.+||+.+|.+|||+.+++..|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 234445688999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=309.85 Aligned_cols=246 Identities=20% Similarity=0.261 Sum_probs=188.0
Q ss_pred cCCCCCCCeEEEEEEcC---CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
+||+|+||.||+|...+ ...+++|.+...... ....|.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 57999999999997433 357888887644322 24568899999999999999999999999999999999999999
Q ss_pred HHHHhcccCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC------C
Q 011092 143 LAKHLFHWET---HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------K 213 (494)
Q Consensus 143 L~~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~ 213 (494)
|.+++..... ...++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence 9999864321 23567888999999999999999999 999999999999999999999999998653221 2
Q ss_pred ccccCCCcCCCcCCCC-------CCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 214 SYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...+++.|+|||++.. ..++.++||||||+++|||++ |..|+.........................+...+
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYS 240 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCC
Confidence 2334677999998642 346889999999999999999 56665443221111111111111111122334566
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
..+..++..|| .||.+|||+.+|++.|.
T Consensus 241 ~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 241 DRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 78889999999 59999999999999873
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=314.33 Aligned_cols=253 Identities=18% Similarity=0.267 Sum_probs=199.6
Q ss_pred cccccccCCCCCCCeEEEEEEcC-----------------CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEE
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-----------------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLL 122 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~ 122 (494)
.+++++.||+|+||.||++.... +..||+|.+...... ..+.|.+|++++.+++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 56788899999999999988532 245899998765422 356788999999999999999999
Q ss_pred EEEecCCccceeeecCCCCCHHHHhcccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec
Q 011092 123 GCCCEGDERLLVAEYMPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193 (494)
Q Consensus 123 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~ 193 (494)
+++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeec
Confidence 99999999999999999999999986432 126899999999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh--CCCCCCCchhHHhhh
Q 011092 194 EDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRD 265 (494)
Q Consensus 194 ~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt--g~~p~~~~~~~~~~~ 265 (494)
.++.++|+|||+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIE 244 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHH
Confidence 9999999999998754322 22345678999999988889999999999999999998 445554322211111
Q ss_pred cccccc--ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 266 RNLQML--TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 266 ~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
...... .........+...+.++.+++.+||+.||.+|||+.++++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 245 NAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111000 0001111123345678999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=306.71 Aligned_cols=242 Identities=30% Similarity=0.424 Sum_probs=201.9
Q ss_pred cCCCCCCCeEEEEEEc-C---CCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||.|+||.||+|... . +..|++|.+....... .+.+.+|+.++..++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 4699999999999954 3 7899999998655433 678899999999999999999999999989999999999999
Q ss_pred CHHHHhcccC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 142 TLAKHLFHWE-------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 142 sL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
+|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999997531 367999999999999999999999999 999999999999999999999999998876542
Q ss_pred ----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 213 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
....+++.|+|||.+....++.++||||||+++++|++ |..|+.......+...... ......+...+.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 235 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPDE 235 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCChH
Confidence 23456789999999988889999999999999999999 5777765433222221111 1111234455688
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
+.+++.+||..+|.+|||+.+++..|+
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 236 LYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=308.51 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=204.4
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.+.+.||.|++|.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 3455666799999999999965 789999999864322 225678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 137 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|+++++|.+++... ....+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999988642 2356899999999999999999999999 999999999999999999999999998754332
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....+++.|+|||.+.+..++.++||||||+++|+|++|+.|+.......... ...+.............+..+.+
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEKCDYPPLPADHYSEELRD 239 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH--HhhhhcCCCCCCChhhcCHHHHH
Confidence 23457889999999988889999999999999999999998875432211100 00000000111111245578999
Q ss_pred HHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 291 LASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
++.+||..+|.+|||+.+|++.|+.+.
T Consensus 240 ~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 240 LVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=308.37 Aligned_cols=248 Identities=22% Similarity=0.327 Sum_probs=198.3
Q ss_pred cccccCCCCCCCeEEEEEEc-C---CCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCc------
Q 011092 63 NIVSEHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------ 130 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~------ 130 (494)
.+.+.||+|+||.||+|... + +..||||.++..... ....+.+|+++++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 35567799999999999853 2 368999999754322 24578999999999999999999999876554
Q ss_pred cceeeecCCCCCHHHHhccc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 131 RLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
.++||||+++++|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccce
Confidence 78999999999999988532 2246899999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCC
Q 011092 207 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 207 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (494)
+...... ....+..|+|||.+.+..++.++||||||+++|||++ |..|+.......+....... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-----NRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCC
Confidence 7654322 1234578999999988889999999999999999999 77666543322221111111 1112
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
.+...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3445667899999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=327.32 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=200.3
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccC-CCCCccEEEEEecCCccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 132 (494)
.+.+.+.||+|+||.||+|++. .+..||||+++...... ...+.+|+.++.++. |||||+++++|...+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 3456678899999999999853 24689999997643322 457889999999996 999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccC-------------------------------------------------------------
Q 011092 133 LVAEYMPNETLAKHLFHWE------------------------------------------------------------- 151 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 151 (494)
+||||+++|+|.++++...
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 9999999999999986421
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC
Q 011092 152 -----------------------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196 (494)
Q Consensus 152 -----------------------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~ 196 (494)
...+++..+..|+.||+.||.|||+.+ ++||||||+|||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~ 276 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGK 276 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCC
Confidence 123677888999999999999999998 99999999999999999
Q ss_pred CeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccc
Q 011092 197 NPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 269 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 269 (494)
.+||+|||+++..... ....+++.|+|||.+.+..++.++||||||+++|||++ |..|+..............
T Consensus 277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~ 356 (401)
T cd05107 277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK 356 (401)
T ss_pred EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH
Confidence 9999999998754321 12345678999999988889999999999999999998 7777754322111111000
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
.......+...+.++.+|+.+||..+|..||++.+|+..|+.+
T Consensus 357 ----~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 357 ----RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred ----cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0011123444568899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=314.82 Aligned_cols=250 Identities=20% Similarity=0.315 Sum_probs=200.2
Q ss_pred ccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
+.+.+.||.|+||.||++.. ..+..||||.++..... ..+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 116 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV 116 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence 44556779999999999973 12457999998764322 245688999999999 89999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
||||+++++|.+++.......+++.++..++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||+++......
T Consensus 117 v~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 195 (302)
T cd05055 117 ITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS 195 (302)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCC
Confidence 999999999999997533345899999999999999999999999 9999999999999999999999999987554322
Q ss_pred ------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 214 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 214 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. .......+...+.
T Consensus 196 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 271 (302)
T cd05055 196 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK----EGYRMAQPEHAPA 271 (302)
T ss_pred ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH----cCCcCCCCCCCCH
Confidence 2234678999999998889999999999999999998 8877754332211111100 0011112334457
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
.+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 272 EIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=314.50 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=192.6
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhcc---CCCCCccEEEEEecC-----Cc
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL---RNNRLTNLLGCCCEG-----DE 130 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~~-----~~ 130 (494)
+++++.||+|+||+||+|.. .+++.||+|.++..... ....+.+|+.+++.+ +||||+++++++... ..
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 45677889999999999995 46899999998754322 234566788777766 699999999998652 34
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++ ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 789999997 68988887544456899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------c------ccc
Q 011092 211 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------M------LTD 273 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~--------~------~~~ 273 (494)
.. ....+|..|+|||++.+..++.++|||||||++|+|++|++||.............. . ...
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239 (288)
T ss_pred CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence 32 234578899999999888899999999999999999999988754322111100000 0 000
Q ss_pred ccc-------cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 SCL-------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ~~~-------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... ........+..+.+++.+||+.||.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00112245678899999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=310.91 Aligned_cols=251 Identities=19% Similarity=0.255 Sum_probs=199.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCC----EEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+.+++..||.|+||+||+|.+ .+|. .||+|.++..... ....+.+|+.++..++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~ 86 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV 86 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence 455667789999999999984 4454 4899998754322 24578899999999999999999999975 457899
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||+++++.+||+|||+++......
T Consensus 87 ~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 87 TQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred EEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 999999999999864 2356899999999999999999999999 9999999999999999999999999988654322
Q ss_pred -----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 214 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 214 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
...+++.|++||.+.+..++.++||||||+++|||++ |..|+............... .....+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 239 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-----ERLPQPPICTID 239 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----CcCCCCccCCHH
Confidence 1233568999999988889999999999999999998 77776543222211111110 011123345678
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.+++.+||..||+.||++.+++..|..+...
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 99999999999999999999999998877554
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=314.43 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=196.8
Q ss_pred cccccccCCCCCCCeEEEEEEcC---------------CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEE
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN---------------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGC 124 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~ 124 (494)
.+++.+.||+|+||.||++.... ...||+|.++..... ....|.+|++++.+++||||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 56777889999999999987532 235899998764322 24568999999999999999999999
Q ss_pred EecCCccceeeecCCCCCHHHHhcccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC
Q 011092 125 CCEGDERLLVAEYMPNETLAKHLFHWE----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194 (494)
Q Consensus 125 ~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~ 194 (494)
+...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||++++
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcC
Confidence 999999999999999999999985321 123688899999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhC--CCCCCCchhHHhhhc
Q 011092 195 DGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG--KHIPPSHALDLIRDR 266 (494)
Q Consensus 195 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg--~~p~~~~~~~~~~~~ 266 (494)
++.+||+|||++....... ...++..|+|||++.++.++.++||||||+++++|+++ ..|+...........
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 9999999999987543321 12346789999999888899999999999999999984 445443222111111
Q ss_pred cccccc--cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 267 NLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 267 ~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
...... ........+...+..+.+|+.+||+.+|.+|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 245 TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 000000 000011123345678999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=312.90 Aligned_cols=245 Identities=20% Similarity=0.270 Sum_probs=203.4
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+.+++.||.|++|.||+|.. .+|+.|++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4577778889999999999994 568999999997655555678899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 99 ~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 99 AGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred CCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 9999999885 346899999999999999999999999 999999999999999999999999988754332 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..++..|+|||.+.+..++.++|||||||++|+|++|+.||.............. ........+...+..+.+++.+
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~ 251 (296)
T cd06655 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSPIFRDFLNR 251 (296)
T ss_pred cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cCCcccCCcccCCHHHHHHHHH
Confidence 4578899999999988899999999999999999999988865432111100000 0011112234456789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||..||.+|||+.+++.
T Consensus 252 ~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 252 CLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HhhcChhhCCCHHHHhh
Confidence 99999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=305.83 Aligned_cols=246 Identities=18% Similarity=0.217 Sum_probs=203.4
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
|+.++.||.|+||.||.++ ..++..|++|.+.... ......+.+|++++++++|+||+++++++.+.+..+++|||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 4566778999999999999 4568999999986543 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999997544457899999999999999999999999 999999999999999999999999998765432 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+++.|+|||.+.+...+.++||||||+++|+|++|..||................ . ...+...+.++.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGN----Y-TPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC----C-CCCccccCHHHHHHHHH
Confidence 567899999999988888999999999999999999998886543322221111111 1 11123456789999999
Q ss_pred HccCCCCCCCChHHHHHHh
Q 011092 295 CLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L 313 (494)
||..+|.+|||+.++++.+
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=323.76 Aligned_cols=195 Identities=17% Similarity=0.201 Sum_probs=172.3
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-C-----CCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N-----NRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----pnIv~l~~~~~~~~~~~l 133 (494)
.|.+++.||+|+||.|.+|. ..+++.||||+++... .-..+-..|+.+|..|+ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 55788899999999999999 5679999999997643 22455677999999996 4 379999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC--CCeEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~ 211 (494)
|+|.+. .+|.+++....-.+++...+..|+.||+.||.+||+.+ |||+||||+||||.+- ..+||+|||.+.....
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 999995 99999998777778999999999999999999999999 9999999999999644 4699999999887654
Q ss_pred C-CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc
Q 011092 212 G-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 258 (494)
Q Consensus 212 ~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~ 258 (494)
. -++..+..|+|||++.|.+|+.+.||||||||+.||++|.++|++.
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 3 3567789999999999999999999999999999999999888764
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=306.16 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=201.7
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+..+++.+.||.|+||.||++.. +++.||+|.++... ....+.+|+.+++.++||||+++++++..+ ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 34567778889999999999975 67889999986532 356789999999999999999999998764 579999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Ccccc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYST 217 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~ 217 (494)
++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .....
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 9999999997544556899999999999999999999999 999999999999999999999999998765432 22334
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
+..|+|||.+.+..++.++||||||+++|+|++ |+.||............... .....+...+..+.+++.+||
T Consensus 160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l 234 (254)
T cd05083 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-----YRMEPPEGCPADVYVLMTSCW 234 (254)
T ss_pred CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----CCCCCCCcCCHHHHHHHHHHc
Confidence 578999999988889999999999999999998 88777654333222211111 111223445678999999999
Q ss_pred cCCCCCCCChHHHHHHhc
Q 011092 297 QYEPRERPNPKSLVTALS 314 (494)
Q Consensus 297 ~~dp~~Rps~~~vl~~L~ 314 (494)
+.+|..||++.+++..|+
T Consensus 235 ~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 235 ETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCChhhCcCHHHHHHHHc
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=306.23 Aligned_cols=242 Identities=18% Similarity=0.224 Sum_probs=197.7
Q ss_pred ccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-----ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 64 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.+.||.|++|.||++.. .++..||+|.+...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 85 (263)
T cd06625 6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEY 85 (263)
T ss_pred ccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEE
Confidence 344559999999999994 56899999998654321 134688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 212 (494)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++.....
T Consensus 86 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 162 (263)
T cd06625 86 MPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT 162 (263)
T ss_pred CCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceeccccccccc
Confidence 999999998863 456899999999999999999999999 999999999999999999999999998754321
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||............. ........+...+..+.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 238 (263)
T cd06625 163 GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA----TQPTNPQLPSHVSPDARN 238 (263)
T ss_pred cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh----ccCCCCCCCccCCHHHHH
Confidence 23456789999999998889999999999999999999998875432211111111 111112344556688999
Q ss_pred HHHHHccCCCCCCCChHHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~~ 312 (494)
++.+||..+|.+|||+.+++..
T Consensus 239 li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 239 FLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHhhcCcccCCCHHHHhhC
Confidence 9999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=320.45 Aligned_cols=249 Identities=19% Similarity=0.181 Sum_probs=195.7
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++++++.||+|+||.||++.. .+++.||+|++.... ....+.|.+|+.++..++||||+.+++++..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 466778889999999999995 458999999996421 1224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
|++||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999864 2356899999999999999999999999 9999999999999999999999999987543322
Q ss_pred --ccccCCCcCCCcCCCC-----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 214 --SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
...||+.|+|||++.. ..++.++|||||||++|+|++|+.||...................... ......+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP-PDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC-CccCCCCH
Confidence 2358999999999863 457889999999999999999999987643322211111110000011 11123567
Q ss_pred HHHHHHHHHccCCCCC--CCChHHHHHH
Q 011092 287 ELVRLASRCLQYEPRE--RPNPKSLVTA 312 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~--Rps~~~vl~~ 312 (494)
.+.+++.+||..++.+ ||++.+++..
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 8999999988654443 7899998874
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=309.29 Aligned_cols=246 Identities=17% Similarity=0.189 Sum_probs=198.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+.+++.||.|+||.||+|.. .+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 455667779999999999994 5689999999976654445678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~ 215 (494)
+++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..... ....
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 90 GGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 9999998863 457999999999999999999999999 99999999999999999999999999865432 2345
Q ss_pred ccCCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-hhhccccccccccccCCCCchhHHHHHHH
Q 011092 216 STNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 216 ~~t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
.++..|+|||++. ...++.++|||||||++|+|++|..|+....... ...........+... .....+..+.++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 244 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHHF 244 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHHH
Confidence 6789999999874 4558889999999999999999998875332111 110000011111110 111345679999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.+|++|||+.++++
T Consensus 245 i~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 245 VKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHccCCchhCcCHHHHhc
Confidence 99999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=321.12 Aligned_cols=235 Identities=19% Similarity=0.255 Sum_probs=190.4
Q ss_pred cCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||++.. .+++.||+|+++.... ...+.+..|+.++.++ +||||+.+++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 469999999999995 4588999999975432 2245678899999888 6999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcccc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 217 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 217 (494)
+|..++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 99988863 457999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH---hhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
|+.|+|||++.+..++.++|||||||++|+|++|+.||....... ........... .....|...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CCCCCCCCCCHHHHHHHHH
Confidence 999999999998899999999999999999999999885311000 00000000001 0112344566889999999
Q ss_pred HccCCCCCCCCh
Q 011092 295 CLQYEPRERPNP 306 (494)
Q Consensus 295 cl~~dp~~Rps~ 306 (494)
||+.||.+|+++
T Consensus 237 ~L~~dP~~R~~~ 248 (327)
T cd05617 237 FLNKDPKERLGC 248 (327)
T ss_pred HhccCHHHcCCC
Confidence 999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=314.51 Aligned_cols=249 Identities=19% Similarity=0.235 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
++++++.||.|+||.||++.. .++..||+|.+...... ....+.+|++++.+++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 355667789999999999995 45889999998754322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCCC--CCcc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY 215 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~ 215 (494)
+|++|.+++.. ...+++..+..++.||+.||.|||++ + ++|+||||+|||++.++.++|+|||++..... ....
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 99999999963 36789999999999999999999984 6 99999999999999999999999999875433 2345
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc---ccccccc------------------
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQMLTDS------------------ 274 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~---~~~~~~~------------------ 274 (494)
.++..|+|||.+.+..++.++||||||+++++|++|+.|+............ .......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 6789999999998888999999999999999999999887543221111000 0000000
Q ss_pred ----------cccCCCC-chhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 275 ----------CLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 275 ----------~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
......+ ...+.++.+++.+||..+|++|||+.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000111 1245679999999999999999999999874
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=317.03 Aligned_cols=250 Identities=18% Similarity=0.308 Sum_probs=197.5
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
...+.+++.||.|+||.||+|... ++..||+|.++..... ....+.+|+.++++++||||+++++++..++..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 345788889999999999999954 5889999999754322 24567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 85 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 85 YLD-KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred CCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 997 588887754 2345889999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc-----------c------ccc
Q 011092 213 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------L------TDS 274 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~-----------~------~~~ 274 (494)
....+++.|+|||.+.+ ..++.++||||||+++|+|+||+.||............... + ...
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 23456889999998865 45788999999999999999999888654322111100000 0 000
Q ss_pred cccC-------CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 CLEG-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.... .....++.++.+++.+||+.||.+|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 011234678899999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=310.43 Aligned_cols=247 Identities=20% Similarity=0.298 Sum_probs=197.9
Q ss_pred ccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+.+++.||.|++|.||+|... .+..|++|.+....... ...|..|+.+++.++||||+++++++...+..++|
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL 87 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence 445567799999999999954 35689999886543222 35689999999999999999999999998899999
Q ss_pred eecCCCCCHHHHhcccCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC---CeEEcccCCc
Q 011092 135 AEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLM 206 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfgla 206 (494)
|||++|++|.+++..... ..+++..++.++.||+.||.|||+++ ++|+||||+||+++.++ .+||+|||++
T Consensus 88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccc
Confidence 999999999999864321 25889999999999999999999999 99999999999998654 5999999998
Q ss_pred ccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCC
Q 011092 207 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 207 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (494)
+...... ....+..|+|||++.+..++.++|||||||++|+|++ |..||.......+...... .....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~~ 241 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-----GGRLD 241 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CCcCC
Confidence 7653221 1223467999999988889999999999999999997 8877765433322211111 11122
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.+...+..+.+++.+||+.+|++|||+.+|++.|.
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 34456688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=307.51 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=194.9
Q ss_pred ccccCCCCCCCeEEEEEEcC-CC--EEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecC------Cccc
Q 011092 64 IVSEHGEKAPNVVYKGKLEN-QR--RIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERL 132 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~~~ 132 (494)
+.+.||+|+||.||+|...+ +. .||+|.++.... ...+.|.+|+.++..++||||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 34667999999999999644 33 689999875432 2256788999999999999999999987542 2468
Q ss_pred eeeecCCCCCHHHHhccc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 133 LVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
++|||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||+++++.++|+|||+++.
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccc
Confidence 999999999999887421 2345889999999999999999999999 99999999999999999999999999886
Q ss_pred CCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 209 SRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 209 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
..... ...+++.|++||++.+..++.++||||||+++|+|++ |..||.......+....... .....+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~ 236 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-----NRLKQP 236 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CCCCCC
Confidence 54321 2234678999999998889999999999999999999 67777543322221111110 011123
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
...+..+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 237 PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 34567899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=321.91 Aligned_cols=246 Identities=16% Similarity=0.193 Sum_probs=192.2
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCC------c
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~ 130 (494)
..+.+++.||+|+||.||++.. .+|..||||++.... ......+.+|+.+++.++||||+++++++...+ .
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 4567778889999999999995 458999999996532 223567889999999999999999999986543 4
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++ ++|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 101 VYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred eEEEEeCCC-cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 689999997 56766663 34888999999999999999999999 9999999999999999999999999987543
Q ss_pred CC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc-------------------
Q 011092 211 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------------- 268 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~------------------- 268 (494)
.. ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||.............
T Consensus 175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (359)
T cd07876 175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR 254 (359)
T ss_pred cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 32 23467899999999998889999999999999999999999886432110000000
Q ss_pred ---c---cccccccc-----------CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 ---Q---MLTDSCLE-----------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 ---~---~~~~~~~~-----------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ........ .......+..+.+|+.+||..||.+|||+.+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00000000 0011123467899999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=304.05 Aligned_cols=241 Identities=28% Similarity=0.422 Sum_probs=198.4
Q ss_pred cCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHH
Q 011092 67 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 145 (494)
.||.|+||.||++...+++.|++|.+...... ....|..|++++++++||||+++++++......++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 56999999999999766999999998765433 35678999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC------ccccCC
Q 011092 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNL 219 (494)
Q Consensus 146 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~ 219 (494)
++.. ....+++..+..++.+++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ....+.
T Consensus 82 ~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T cd05041 82 FLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI 159 (251)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence 9864 2346889999999999999999999999 9999999999999999999999999987654221 122356
Q ss_pred CcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC
Q 011092 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298 (494)
Q Consensus 220 ~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 298 (494)
.|+|||.+.++.++.++|+||||+++++|+| |..|+.............. ......+...+..+.+++.+||..
T Consensus 160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~ 234 (251)
T cd05041 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-----GYRMPAPQLCPEEIYRLMLQCWAY 234 (251)
T ss_pred ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-----CCCCCCCccCCHHHHHHHHHHhcc
Confidence 7999999988889999999999999999999 6666654332222211111 011122445567899999999999
Q ss_pred CCCCCCChHHHHHHhc
Q 011092 299 EPRERPNPKSLVTALS 314 (494)
Q Consensus 299 dp~~Rps~~~vl~~L~ 314 (494)
+|.+|||+.++++.|+
T Consensus 235 ~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 235 DPENRPSFSEIYNELQ 250 (251)
T ss_pred ChhhCcCHHHHHHHhh
Confidence 9999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=305.77 Aligned_cols=248 Identities=20% Similarity=0.308 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
.+.+.+.||+|+||.||++...++..|++|.+.... .....|.+|+.+++.++|+||+++++++.. ...+++|||+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAK 84 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCC
Confidence 456777889999999999997777889999987543 235678999999999999999999999887 778999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----cc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 215 (494)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 163 (260)
T cd05073 85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 163 (260)
T ss_pred CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCC
Confidence 99999997544556889999999999999999999999 9999999999999999999999999987554322 12
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.++..|+|||++.+..++.++|+||||+++++++| |..||............... .....+...+..+.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~ 238 (260)
T cd05073 164 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIMMR 238 (260)
T ss_pred cccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-----CCCCCcccCCHHHHHHHHH
Confidence 34567999999998889999999999999999999 78777654322222111111 1111233456789999999
Q ss_pred HccCCCCCCCChHHHHHHhccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
||+.+|++||++.+++..|+.+
T Consensus 239 ~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 239 CWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred HcccCcccCcCHHHHHHHHhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=309.58 Aligned_cols=250 Identities=22% Similarity=0.282 Sum_probs=201.0
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CC---CEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQ---RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.++++.+.||.|+||.||+|... ++ ..||||.++... ......|..|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34567788899999999999954 33 369999987542 22356799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 214 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 214 (494)
|||+++++|.+++... ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 9999999999998642 456899999999999999999999999 99999999999999999999999998875432211
Q ss_pred -------cc--cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 215 -------YS--TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 215 -------~~--~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
.. .+..|++||.+.+..++.++||||||+++|||++ |..||............... .....+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~ 236 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-----YRLPPPMDC 236 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CcCCCcccC
Confidence 11 1347999999998889999999999999999886 88887654322222211111 011123345
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+..+.+++.+||+.+|.+||++.+++..|+.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 67899999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=309.88 Aligned_cols=252 Identities=17% Similarity=0.239 Sum_probs=201.4
Q ss_pred HHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCc
Q 011092 52 LKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 52 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 130 (494)
++..++++....++ |+|+||.||+|.. .++..|++|.+........+.+.+|+.++++++|+||+++++++..++.
T Consensus 3 ~~~~~~~~~~~~~l---g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (268)
T cd06624 3 YEYEYDENGERVVL---GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79 (268)
T ss_pred cccccccCCceEEE---ecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence 34456777766655 9999999999994 4688999999876655556789999999999999999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEEcccCCcc
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMK 207 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla~ 207 (494)
.++|+||+++++|.+++... ..++ ++..+..++.||+.||.|||+++ |+||||||+||+++. ++.++|+|||++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999998642 2345 78888999999999999999999 999999999999986 6799999999886
Q ss_pred cCCCC----CccccCCCcCCCcCCCCCC--CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 208 NSRDG----KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 208 ~~~~~----~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
..... ....++..|+|||++.+.. ++.++||||||+++|+|++|..|+........... ...........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~ 234 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMF---KVGMFKIHPEIP 234 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHh---hhhhhccCCCCC
Confidence 54321 2345788999999986544 78899999999999999999988754211100000 000001112334
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+.++.+++.+||+.+|.+|||+.+++.
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 556688999999999999999999999986
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=318.38 Aligned_cols=247 Identities=17% Similarity=0.198 Sum_probs=191.7
Q ss_pred ccccCCCC--CCCeEEEEE-EcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 64 IVSEHGEK--APNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 64 ~i~~lG~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+++.||+| +|++||++. ..+|..||||.+....... .+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45677888 778999998 4568999999997543222 345778999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-------
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------- 211 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------- 211 (494)
++++|.+++.......+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++++||+.......
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999996544456899999999999999999999999 99999999999999999999999986433211
Q ss_pred ----CCccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh----ccccccccc-------
Q 011092 212 ----GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----RNLQMLTDS------- 274 (494)
Q Consensus 212 ----~~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~----~~~~~~~~~------- 274 (494)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... .......+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 112245678999999976 358899999999999999999999886432111100 000000000
Q ss_pred -----------------c------------ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 -----------------C------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 -----------------~------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. .........+..+.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 000011234568999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=322.87 Aligned_cols=247 Identities=17% Similarity=0.227 Sum_probs=193.7
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCC------c
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~ 130 (494)
..+.+++.||+|+||.||++.. ..++.||||.+...... ....+.+|+.+++.++||||+++++++.... .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 4566778889999999999995 45889999999754322 2457889999999999999999999986543 4
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~~lv~e~~~-~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 97 VYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred eEEEhhhhc-ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 689999997 56777664 35889999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc-----------------
Q 011092 211 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM----------------- 270 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~----------------- 270 (494)
.. ....+|..|+|||++.+..++.++|||||||++|+|++|+.||...............
T Consensus 171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (355)
T cd07874 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_pred CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence 33 2356789999999999888999999999999999999999988654211100000000
Q ss_pred -----------cc------cccc--cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 271 -----------LT------DSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 271 -----------~~------~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
.. +... ....+...+..+.+|+.+||+.||.+|||+.++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 0000 001112234678999999999999999999999973
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=303.14 Aligned_cols=243 Identities=19% Similarity=0.257 Sum_probs=206.0
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
..+++.||+|+||.||++.+ .+|..||||.+.... +.+++.+|+.++.+++.|+||++||.+.....+|+|||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 34667889999999999995 569999999987654 688999999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 216 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 216 (494)
||+.++++- +++++++.++..|+...++||+|||... -||||||..|||++-+|.+||+|||.|....+. .+..
T Consensus 113 GSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 113 GSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 999999875 4678999999999999999999999987 799999999999999999999999998866543 4668
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
||+.|||||++..-.|..++||||||++..||..|++|+..- .-++ ..+.....+.+.-.-|...+.++-+++++||
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI--HPMR-AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CL 267 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI--HPMR-AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCL 267 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc--cccc-eeEeccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence 999999999999888999999999999999999999776421 1111 1111111222222345567889999999999
Q ss_pred cCCCCCCCChHHHHH
Q 011092 297 QYEPRERPNPKSLVT 311 (494)
Q Consensus 297 ~~dp~~Rps~~~vl~ 311 (494)
-+.|++|.|+.++++
T Consensus 268 iK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 268 IKKPEERKTALRLCE 282 (502)
T ss_pred cCCHHHHHHHHHHhh
Confidence 999999999988876
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=307.53 Aligned_cols=245 Identities=23% Similarity=0.305 Sum_probs=195.1
Q ss_pred cCCCCCCCeEEEEEEc-CCC--EEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|... ++. .+++|.++.... ...+.+.+|++++.++ +||||+++++++...+..++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 4699999999999954 444 568888875332 2346788999999999 8999999999999999999999999999
Q ss_pred CHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 142 TLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 142 sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986421 124789999999999999999999999 9999999999999999999999999986
Q ss_pred cCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCch
Q 011092 208 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 208 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
..... .....+..|+|||++.+..++.++||||||++++||++ |..||.............. ......+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-----CCCCCCCCc
Confidence 33211 11223567999999988889999999999999999997 8888754332221111111 011122334
Q ss_pred hHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 284 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.+..+.+++.+||..+|.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5578999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=310.81 Aligned_cols=243 Identities=19% Similarity=0.265 Sum_probs=194.9
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++++.||+|+||.||+|.. .++..||+|.+...... ....|.+|+.++.+++||||+++++++...+..++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 45667789999999999994 56899999998654322 24568899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--Ccccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYST 217 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~ 217 (494)
+++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ....+
T Consensus 83 ~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (279)
T cd06619 83 GGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG 155 (279)
T ss_pred CCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCC
Confidence 99996543 4788899999999999999999999 999999999999999999999999998765432 34568
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH---hhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
+..|+|||++.+..++.++||||||+++|+|++|+.||....... ......................+.++.+++.+
T Consensus 156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (279)
T cd06619 156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ 235 (279)
T ss_pred ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence 899999999998889999999999999999999998875321100 00000000011111111122345789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.+|.+||++++++.
T Consensus 236 ~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 236 CMRKQPKERPAPENLMD 252 (279)
T ss_pred HhhCChhhCCCHHHHhc
Confidence 99999999999999987
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=304.45 Aligned_cols=247 Identities=22% Similarity=0.339 Sum_probs=201.8
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++++.+.||.|+||.||++...++..+|+|.+.... .....|.+|++++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4566778889999999999997668899999987543 235679999999999999999999999999899999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 214 (494)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 83 HGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9999999864 2346889999999999999999999999 9999999999999999999999999987543321 2
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..|+|||.+.++.++.++||||||+++|||++ |..|+................ ....+...+..+.+|+.
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~ 235 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF-----RLYKPRLASQSVYELMQ 235 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-----CCCCCCCCCHHHHHHHH
Confidence 234578999999998889999999999999999998 887775443222221111100 00112234578999999
Q ss_pred HHccCCCCCCCChHHHHHHhc
Q 011092 294 RCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~ 314 (494)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHcccChhhCCCHHHHHHhhC
Confidence 999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=323.08 Aligned_cols=242 Identities=19% Similarity=0.269 Sum_probs=202.7
Q ss_pred ccccCCCCCCCeEEEEEEcC--CC--EEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 64 IVSEHGEKAPNVVYKGKLEN--QR--RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+.||+|.||+|++|.|.. |+ .||||+++.+... ....|++|+.+|.+|+|||+++|||+..+ ....+|||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 33566999999999999643 44 6899999876654 47789999999999999999999999987 6789999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcc---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--- 215 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~--- 215 (494)
+.|||.+.|++.....|.......++.||+.||.||.+++ +|||||-..|+|+-....+||+||||.+........
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998755567888999999999999999999998 999999999999999999999999999977654322
Q ss_pred ----ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCC-CCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 216 ----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 216 ----~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
...+.|+|||.+....++.+||||+|||+||||+|+. .|+.+..-..+.+ ..+....-..|..+++.+++
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~-----~iD~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILK-----NIDAGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHH-----hccccccCCCCCCChHHHHH
Confidence 2357899999999999999999999999999999965 5665543222221 12222233457788999999
Q ss_pred HHHHHccCCCCCCCChHHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~~ 312 (494)
++..||..+|.+|||+..|.+.
T Consensus 347 imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred HHHHhccCCccccccHHHHHHh
Confidence 9999999999999999999743
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=326.40 Aligned_cols=246 Identities=18% Similarity=0.232 Sum_probs=193.7
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~l 133 (494)
.++++.||+|+||.||++.. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 34567779999999999995 5689999999865321 23467889999999999999999999998776 6899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999996 68888775 3467999999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc-------------------
Q 011092 213 ----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------------- 268 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~------------------- 268 (494)
....++..|+|||++.+. .++.++|||||||++|||++|+.||.............
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 223568899999998874 47899999999999999999999886542211100000
Q ss_pred ----cccc-cccc--cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 ----QMLT-DSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 ----~~~~-~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.... .+.. ........++++.+|+.+||+.||.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0000 0000 00122334678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=305.36 Aligned_cols=237 Identities=25% Similarity=0.369 Sum_probs=190.8
Q ss_pred cCCCCCCCeEEEEEEcC-C----------CEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 67 EHGEKAPNVVYKGKLEN-Q----------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.||+|+||.||+|...+ + ..|++|.+...... ...|.+|+.++++++||||+++++++.. +..++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 56999999999999654 3 25788887655432 6789999999999999999999999988 7789999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-------CeEEcccCCccc
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-------NPRLSTFGLMKN 208 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-------~~kl~Dfgla~~ 208 (494)
||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999999742 236899999999999999999999999 99999999999999887 799999999887
Q ss_pred CCCCCccccCCCcCCCcCCCCC--CCCCCCCchhHHHHHHHHHhC-CCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 209 SRDGKSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 209 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
........++..|+|||++.+. .++.++||||||+++|+|++| ..|+.......... ... .....+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~------~~~~~~~~~~ 230 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQ------DQHRLPMPDC 230 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHh------cCCCCCCCCc
Confidence 6655556677889999999876 689999999999999999996 44443321111110 000 0011112222
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
..+.+++.+||..+|.+|||+.++++.|.
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 78999999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=307.27 Aligned_cols=249 Identities=22% Similarity=0.298 Sum_probs=200.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-C---CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
++++.+.||+|+||.||+|... + +..||+|.++..... ..+.|..|+.++.+++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 4556678899999999999853 2 337999998754322 2457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc-
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS- 214 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~- 214 (494)
||+++++|.+++.. ....+++.+++.++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++........
T Consensus 85 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 85 EYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999999964 2356899999999999999999999999 99999999999999999999999999876543221
Q ss_pred ------cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 215 ------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 215 ------~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
..++..|++||++.+..++.++||||||++++++++ |..|+................ ....+...+..
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 237 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-----RLPAPMDCPAA 237 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-----cCCCCCCCCHH
Confidence 112457999999998889999999999999999886 888875433221111111111 11123345678
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=314.33 Aligned_cols=252 Identities=22% Similarity=0.310 Sum_probs=201.8
Q ss_pred ccccccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcc
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~ 131 (494)
+.+.+.||+|+||.||++... ....||+|.++.... .....+..|+.++.++ +||||+++++++...+..
T Consensus 14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (314)
T cd05099 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL 93 (314)
T ss_pred eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence 456678899999999999741 245799999875432 2245688999999999 699999999999998899
Q ss_pred ceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~ 197 (494)
++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++| ++||||||+|||+++++.
T Consensus 94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCc
Confidence 99999999999999996432 235889999999999999999999999 999999999999999999
Q ss_pred eEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccc
Q 011092 198 PRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 270 (494)
Q Consensus 198 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 270 (494)
+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..||...............
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 252 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG 252 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999997654321 1223467999999988889999999999999999999 77777554332222111111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.....+...+..+.+++.+||..+|.+|||+.++++.|+.+...
T Consensus 253 -----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 253 -----HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 11122345567899999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=304.22 Aligned_cols=246 Identities=17% Similarity=0.215 Sum_probs=186.6
Q ss_pred cCCCCCCCeEEEEEEcCC---CEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKLENQ---RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||+|...++ ..+++|.+..... ...+.|.+|+.+++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 579999999999984333 3566777665432 235689999999999999999999999999999999999999999
Q ss_pred HHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC------CCc
Q 011092 143 LAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------GKS 214 (494)
Q Consensus 143 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~~ 214 (494)
|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999997432 234667788899999999999999998 99999999999999999999999998764221 223
Q ss_pred cccCCCcCCCcCCCC-------CCCCCCCCchhHHHHHHHHHhCC-CCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 215 YSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
..++..|+|||++.. ..++.++||||||+++|||+++. .|+.........................+...+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 457789999998753 23578999999999999999864 4553322211111111111111111222334567
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.+.+++..|| .+|.+||++.++++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 8899999999 67999999999998773
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=305.56 Aligned_cols=240 Identities=20% Similarity=0.324 Sum_probs=197.2
Q ss_pred ccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---------hHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 64 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+.+.||.|++|.||+|.. .++..||+|.+....... .+.+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNI 83 (267)
T ss_pred ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEE
Confidence 345679999999999995 458899999986543322 1457899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 84 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 84 FLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred EEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 9999999999999963 356899999999999999999999999 999999999999999999999999998765421
Q ss_pred ---------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCch
Q 011092 213 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 213 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
....++..|+|||.+.+..++.++||||||+++|+|++|..||........... ... ......+..
T Consensus 161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~ 235 (267)
T cd06628 161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK----IGE-NASPEIPSN 235 (267)
T ss_pred ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH----Hhc-cCCCcCCcc
Confidence 123567899999999988899999999999999999999998865322111000 000 111223445
Q ss_pred hHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 284 DGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+..+.+++.+||+.||.+||++.++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 236 ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 6688999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=311.55 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=202.3
Q ss_pred ccccccccCCCCCCCeEEEEEEc-----CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEec--CCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~ 131 (494)
..+.+++.||+|+||.||++... ++..||||.++..... ..+.|.+|+++++.++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 34567788899999999999853 3679999999765533 35679999999999999999999999877 5578
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 9999999999999999642 235999999999999999999999999 99999999999999999999999999886653
Q ss_pred CC-------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh----------hccccccccc
Q 011092 212 GK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNLQMLTDS 274 (494)
Q Consensus 212 ~~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~----------~~~~~~~~~~ 274 (494)
.. ...++..|++||.+.+..++.++||||||++++||+||..|+......... ..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 21 123345699999998888999999999999999999999876432211100 0000000000
Q ss_pred cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 275 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
......+...+.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111112334557899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=311.02 Aligned_cols=249 Identities=17% Similarity=0.224 Sum_probs=202.5
Q ss_pred CCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..+.+++++.||.|++|.||++.. .++..||+|.+........+.|.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 345677888999999999999995 4589999999976554446679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|+++++|.+++.. ...++++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 83 FCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence 9999999998864 2356999999999999999999999999 999999999999999999999999987654322
Q ss_pred CccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 213 KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
....+++.|++||.+. +..++.++||||||+++|+|++|+.||............... .......+...+.+
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 237 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS---EPPTLDQPSKWSSS 237 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC---CCCCcCCcccCCHH
Confidence 2345788999999874 344678999999999999999999887653221111111110 00111123345678
Q ss_pred HHHHHHHHccCCCCCCCChHHHHH
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+++.+||+.+|.+||++.++++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhc
Confidence 999999999999999999999987
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=310.60 Aligned_cols=249 Identities=23% Similarity=0.324 Sum_probs=199.5
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
++++++.||.|+||.||++... ++..||+|.+...... ....|.+|+.++.+++||||+++++++..++..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 4567778899999999999853 4678999998754322 24568899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec
Q 011092 134 VAEYMPNETLAKHLFHWE--------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~ 193 (494)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+||+++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~ 164 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVG 164 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEec
Confidence 999999999999996321 124788899999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhc
Q 011092 194 EDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDR 266 (494)
Q Consensus 194 ~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~ 266 (494)
.++.++|+|||++...... .....++.|+|||.+.+..++.++|||||||++|+|++ |..||...........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~ 244 (288)
T cd05050 165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYY 244 (288)
T ss_pred CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999999999998754322 12234567999999988889999999999999999998 7667654322222111
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcc
Q 011092 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
... ... ...+...+.++.+++.+||+.+|.+|||+.++++.|++
T Consensus 245 ~~~----~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 245 VRD----GNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred Hhc----CCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 110 000 11233456789999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=306.27 Aligned_cols=243 Identities=14% Similarity=0.199 Sum_probs=194.3
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecC------Ccccee
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG------DERLLV 134 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~------~~~~lv 134 (494)
+++..||.|+||.||+|.. .+++.||+|.+.... .....+..|+.++.++ +||||+++++++... ...++|
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 87 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 87 (272)
T ss_pred hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence 3455669999999999995 458899999997543 3456788999999999 799999999998753 357899
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC---
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 211 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 211 (494)
|||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~ 166 (272)
T cd06637 88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 166 (272)
T ss_pred EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccc
Confidence 99999999999987544567899999999999999999999999 99999999999999999999999999875432
Q ss_pred -CCccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 212 -GKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 212 -~~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
.....+++.|+|||++. +..++.++|||||||++|||++|+.|+............ .........+...+
T Consensus 167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 242 (272)
T cd06637 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRNPAPRLKSKKWS 242 (272)
T ss_pred cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH----hcCCCCCCCCCCcC
Confidence 23456788999999986 335788999999999999999999887543211111100 00111111223455
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+|+.+||..+|.+|||+.+++.
T Consensus 243 ~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 243 KKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 78999999999999999999999976
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=310.78 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=202.4
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+++++++.||+|+||+||++.. .+|..||+|++..... ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4567788889999999999994 4689999999865432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCC--CCc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKS 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~ 214 (494)
+++++|.+++.. .+++++..+..++.+++.||.|||+ .+ ++|+||+|+||++++++.++|+|||++..... ...
T Consensus 85 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 999999998863 4578999999999999999999997 46 99999999999999999999999999865432 234
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH--------HhhhccccccccccccCCCCchhHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--------LIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
..++..|+|||++.+..++.++|||||||++|+|+||+.||...... .+.. ..................+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQEPPPRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH-HHHHHhhccCCCCCchhcCH
Confidence 56789999999998888999999999999999999999988643221 0000 00111111111111112557
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.+.+++.+||+.||.+|||+.++++...
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 8999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=306.99 Aligned_cols=246 Identities=21% Similarity=0.279 Sum_probs=198.2
Q ss_pred ccccCCCCCCCeEEEEEEc-CC---CEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 64 IVSEHGEKAPNVVYKGKLE-NQ---RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+.||+|+||.||+|... ++ ..|++|.++.... ...+.+..|++++++++||||+++++++...+..++||||+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcC
Confidence 3455699999999999954 33 3799999875432 22567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc----
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---- 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---- 214 (494)
++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 166 (268)
T cd05063 89 ENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYT 166 (268)
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceeccccccccee
Confidence 99999999864 2356899999999999999999999999 99999999999999999999999999875543211
Q ss_pred ---cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 215 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 215 ---~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
...++.|+|||++.+..++.++||||||+++|||++ |..|+.......+........ ....+...+..+.+
T Consensus 167 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~ 241 (268)
T cd05063 167 TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-----RLPAPMDCPSAVYQ 241 (268)
T ss_pred ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-----CCCCCCCCCHHHHH
Confidence 112357999999988889999999999999999998 888876543222221111111 11122345678999
Q ss_pred HHHHHccCCCCCCCChHHHHHHhccc
Q 011092 291 LASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
++.+||+.+|.+||++.++++.|+.+
T Consensus 242 li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 242 LMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=309.99 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+.+++.||+|+||.||+|... .+..||+|.+...... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 4567788899999999999743 2458999998654321 23468889999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCC
Q 011092 134 VAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
||||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~ 165 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGM 165 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCc
Confidence 999999999999996421 133567788999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccC
Q 011092 206 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 206 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
++..... ....++..|+|||.+.++.++.++|||||||++|||++ |..|+............... . ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~----~-~~ 240 (288)
T cd05061 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG----G-YL 240 (288)
T ss_pred cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----C-CC
Confidence 8754322 12234678999999998889999999999999999999 66666543322222111110 0 11
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
..+...+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 12334457899999999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=303.39 Aligned_cols=242 Identities=22% Similarity=0.307 Sum_probs=195.6
Q ss_pred cCCCCCCCeEEEEEEc-CC---CEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE-NQ---RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|... .+ ..||+|.+...... ..+.+.+|+++++.+.||||+++++++. .+..++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~ 80 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG 80 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence 5799999999999842 22 68999999765432 3567899999999999999999999876 45689999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc-------
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------- 214 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------- 214 (494)
+|.+++.. ...+++..+..++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 81 PLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred cHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 99999974 346899999999999999999999999 99999999999999999999999999876543221
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 232 (257)
T cd05060 158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-----ERLPRPEECPQEIYSIML 232 (257)
T ss_pred ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHH
Confidence 112457999999988889999999999999999998 88777543222111111110 111234455678999999
Q ss_pred HHccCCCCCCCChHHHHHHhcccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
+||..+|.+||++.++++.|+.+.
T Consensus 233 ~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 233 SCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHhcCChhhCcCHHHHHHHHHhcc
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=307.13 Aligned_cols=242 Identities=18% Similarity=0.267 Sum_probs=200.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+++++.+|.|++|.||+|... ++..||+|.+.... ......+.+|+++++.++||||+++++++..+...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 3556677899999999999954 58999999997543 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
++++|.+++.. .++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++..... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999853 37899999999999999999999999 999999999999999999999999998765433 24
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCch-hHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD-DGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 293 (494)
..++..|+|||++.+..++.++||||||+++|+|+||..|+............... .....+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHHH
Confidence 46778899999999888999999999999999999999887543221111111111 11111222 5678999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||..+|++|||+++++.
T Consensus 233 ~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 233 LCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHhhCChhhCcCHHHHhh
Confidence 999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=311.05 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=196.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-----------------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEE
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-----------------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLL 122 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~ 122 (494)
.+++.+.||+|+||.||++... ++..||+|.+...... ....|.+|+.+++.++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3566778899999999998532 2447899999754322 246789999999999999999999
Q ss_pred EEEecCCccceeeecCCCCCHHHHhcccCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec
Q 011092 123 GCCCEGDERLLVAEYMPNETLAKHLFHWET---------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193 (494)
Q Consensus 123 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~ 193 (494)
+++..++..++||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEc
Confidence 999999999999999999999999864221 24778899999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh--CCCCCCCchhHHhhh
Q 011092 194 EDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRD 265 (494)
Q Consensus 194 ~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt--g~~p~~~~~~~~~~~ 265 (494)
.++.++|+|||++....... ...+++.|++||+..++.++.++|||||||++|||++ |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987543321 1233578999999888889999999999999999998 555654332211111
Q ss_pred ccccccc--cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 266 RNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 266 ~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
....... ........+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000000 000001112345578999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=314.18 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=203.1
Q ss_pred cccccccCCCCCCCeEEEEEEcC--------CCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 130 (494)
.+++.+.||+|+||.||++.... +..||+|.++..... ..+.+.+|+.++.++ +||||+++++++...+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 35677889999999999997321 236899988754322 256789999999999 89999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~ 196 (494)
.+++|||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~ 171 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDN 171 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCC
Confidence 999999999999999986421 234788999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccc
Q 011092 197 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 269 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 269 (494)
.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++ |..|+..............
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 251 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE 251 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999987654321 1223467999999998889999999999999999998 7777765433332221111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
. .....+...+..+.+++.+||+.+|.+|||+.+++..|+.+...
T Consensus 252 ~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 252 G-----HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred C-----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 1 11122344567899999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=307.86 Aligned_cols=251 Identities=18% Similarity=0.238 Sum_probs=201.3
Q ss_pred ccccccCCCCCCCeEEEEEEcC-----CCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEec-CCcccee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLEN-----QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLV 134 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 134 (494)
+.+.+.||+|+||.||+|.... +..|++|.+..... .....+.+|+.++++++||||+++++++.. +...+++
T Consensus 8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 87 (280)
T cd05043 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVL 87 (280)
T ss_pred eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEE
Confidence 4455667999999999999654 68899999875432 225668899999999999999999998876 4678999
Q ss_pred eecCCCCCHHHHhcccCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 135 AEYMPNETLAKHLFHWET------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
++|+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||+++.
T Consensus 88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred EEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 999999999999864321 46899999999999999999999999 99999999999999999999999999975
Q ss_pred CCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 209 SRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 209 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
..... ...++..|+|||++.+..++.++||||||+++||+++ |+.|+.......+....... .....+
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~ 241 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-----YRLAQP 241 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-----CCCCCC
Confidence 53221 2335678999999988889999999999999999999 88887654322222111111 111122
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
..++..+.+++.+||..+|++|||+.+++..|+.+..
T Consensus 242 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 242 INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 3456789999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=317.81 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=198.0
Q ss_pred cccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecC-Ccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-DER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~-~~~ 131 (494)
.+++.+.||.|+||.||+|.. .+++.||||.++..... ....+.+|+.++.++ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 567788889999999999973 34678999999764322 245688999999999 789999999988654 457
Q ss_pred ceeeecCCCCCHHHHhcccC------------------------------------------------------------
Q 011092 132 LLVAEYMPNETLAKHLFHWE------------------------------------------------------------ 151 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 151 (494)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC------ccccCCC
Q 011092 152 -----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLA 220 (494)
Q Consensus 152 -----~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~ 220 (494)
...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....... ...+++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 124678888999999999999999999 9999999999999999999999999987643221 2234567
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (494)
|+|||.+.+..++.++||||||+++|+|++ |..|++............. . ......+...++.+.+++..||+.+
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK---E-GTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh---c-cCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 7777654321110000000 0 0011122234568999999999999
Q ss_pred CCCCCChHHHHHHhccccc
Q 011092 300 PRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 300 p~~Rps~~~vl~~L~~~~~ 318 (494)
|.+|||+.++++.|+.+.+
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=303.36 Aligned_cols=244 Identities=16% Similarity=0.197 Sum_probs=200.2
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEec-CCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~e~ 137 (494)
|++++.||.|++|.||++.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++.+.. .+..++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 56777889999999999995 4578999999965432 234568899999999999999999998764 3457899999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
+++++|.+++.......+++.++..++.+++.||.+||+++ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 99999999997544566899999999999999999999999 999999999999999999999999998755332 2
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...+++.|+|||++.+..++.++||||||+++++|++|+.||................ ....+...+..+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-----LPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-----CCCCccccCHHHHHHHH
Confidence 3457889999999998889999999999999999999998886543322221111111 11233456688999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||+.+|.+|||+.+++.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 236 TMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHhccCcccCCCHHHHhc
Confidence 999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=303.14 Aligned_cols=247 Identities=17% Similarity=0.203 Sum_probs=201.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+++...+|.|+||.||++.. .++..+++|.+........+.+.+|++++++++||||+++++++..++..+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 355667779999999999995 4588999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ...
T Consensus 84 ~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 84 GGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 9999998864 2357999999999999999999999999 999999999999999999999999998754432 234
Q ss_pred ccCCCcCCCcCCCCC---CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh-ccccccccccccCCCCchhHHHHHHH
Q 011092 216 STNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-RNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~---~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
.++..|++||.+.+. .++.++||||||+++|+|+||+.|+.......... .......... ...+...+.++.++
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 239 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK--LKDKEKWSPVFHDF 239 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc--ccchhhhhHHHHHH
Confidence 577889999999776 78899999999999999999998876532111111 0011011111 11233456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||..+|..|||+.+++.
T Consensus 240 i~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 240 IKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHcCCChhhCCCHHHHhc
Confidence 99999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=303.45 Aligned_cols=244 Identities=25% Similarity=0.314 Sum_probs=190.9
Q ss_pred cCCCCCCCeEEEEEEc----CCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEec-CCccceeeecCCC
Q 011092 67 EHGEKAPNVVYKGKLE----NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEYMPN 140 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~e~~~~ 140 (494)
.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.. ++..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 4699999999999843 23579999986432 2235678899999999999999999998764 5568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--------
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------- 212 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------- 212 (494)
++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++.....
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 9999998642 345678888999999999999999998 999999999999999999999999998754321
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCC-CCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....++..|+|||.+.+..++.++||||||+++|||++|..| +.......+....... .....+...+..+.++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 234 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-----RRLLQPEYCPDPLYEV 234 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHHH
Confidence 122346789999999888899999999999999999996544 4332211111111110 0111123345789999
Q ss_pred HHHHccCCCCCCCChHHHHHHhcccc
Q 011092 292 ASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
+.+||..+|++||++.+++..|+.+.
T Consensus 235 i~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 235 MLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=316.44 Aligned_cols=242 Identities=12% Similarity=0.157 Sum_probs=188.8
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+.+++.||.|+||.||+|... ++..||+|..... ....|+.++++++||||+++++++..++..++||||+.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 4667788899999999999964 4789999985432 23579999999999999999999999999999999996
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Cccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 216 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 216 (494)
++|.+++.. ...++++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 788888864 3457999999999999999999999999 999999999999999999999999998753322 2456
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhh------hcccc--cccccccc-------
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIR------DRNLQ--MLTDSCLE------- 277 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~------~~~~~--~~~~~~~~------- 277 (494)
||+.|+|||++.+..++.++|||||||++|||+++..++..... .... ..... ........
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 89999999999988899999999999999999997655422100 0000 00000 00000000
Q ss_pred ----------C-----C----CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 ----------G-----Q----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 ----------~-----~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. . .....+..+.++|.+||+.||.+|||+.++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 0 0 00123456778999999999999999999986
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=320.79 Aligned_cols=246 Identities=15% Similarity=0.207 Sum_probs=193.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecC------Cc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~ 130 (494)
..+.+++.||+|+||.||++.. ..++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 4566777889999999999995 4588999999975322 2346788999999999999999999988653 34
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 104 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred EEEEEeCCC-CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 699999997 57777774 34888999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc-------------
Q 011092 211 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------- 274 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~------------- 274 (494)
.. ....+|..|+|||++.+..++.++|||||||++|+|++|+.||...............+..+
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 32 23567899999999998889999999999999999999999886532211110000000000
Q ss_pred --------------------c---ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 --------------------C---LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 --------------------~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. .........+..+.+++.+||+.||.+|||+.++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000011112457899999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=340.60 Aligned_cols=247 Identities=18% Similarity=0.234 Sum_probs=194.6
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
+..+.+++.||.|+||+||++.. .++..||+|.+...... ....|..|+.++.+|+|||||+++++|... ..+||
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 45678888999999999999995 45789999998754322 245789999999999999999999988653 56899
Q ss_pred eeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccccccccceeecC-----------
Q 011092 134 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG------RALYHDLNAYRILFDE----------- 194 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~------~ivH~Dlkp~Nill~~----------- 194 (494)
||||+++++|.++|... ....+++..++.|+.||+.||.|||+.+ .||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999998642 1357999999999999999999999832 2999999999999964
Q ss_pred ------CCCeEEcccCCcccCCCC---CccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchh-HH
Q 011092 195 ------DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DL 262 (494)
Q Consensus 195 ------~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~-~~ 262 (494)
.+.+||+|||++...... ....+|+.|+|||++.+ ..++.++||||||||||+|+||..||..... ..
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 345899999998765432 24468999999999864 3488999999999999999999999864321 11
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 263 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+... +...+. ......+.++.+||..||+.+|.+||++.+++.
T Consensus 252 li~~-lk~~p~-----lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 252 LISE-LKRGPD-----LPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHH-HhcCCC-----CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 1110 111000 011234578999999999999999999999984
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=317.73 Aligned_cols=249 Identities=18% Similarity=0.182 Sum_probs=196.0
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++.+++.||+|+||.||+++.. +++.||+|.+.... ......+..|+.++..++|+||+.+++++..++..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4667788899999999999954 58899999986421 1123457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
|++||+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 y~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 82 YYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 99999999999642 356899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccCCCcCCCcCCCC-----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 214 --SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
...||+.|+|||++.+ +.++.++|||||||++|+|++|+.||..................... .......+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~~~ 238 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHITDVSE 238 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC-CCccccCCH
Confidence 2468999999999875 45788999999999999999999998654332222111111000001 111223567
Q ss_pred HHHHHHHHHccCCCCC--CCChHHHHHH
Q 011092 287 ELVRLASRCLQYEPRE--RPNPKSLVTA 312 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~--Rps~~~vl~~ 312 (494)
++.+++.+||..++.+ |++++++++.
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 8999999999876654 3678877753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=310.87 Aligned_cols=251 Identities=18% Similarity=0.281 Sum_probs=198.9
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.+..+.+++.||.|+||.||+|... ++..||+|.+..... .....+.+|+.+++.++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 4567888899999999999999954 588999999875432 23456789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9997 689888864 2456889999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc-----------cccccc------
Q 011092 213 -KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTD------ 273 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~-----------~~~~~~------ 273 (494)
....+++.|+|||.+.+. .++.++||||||+++|+|+||+.||............ ......
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 233467899999988654 4788999999999999999999888654322111000 000000
Q ss_pred ---cccc----CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 ---SCLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ---~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+... ......++..+.+||.+||+.||.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0111235678899999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=319.93 Aligned_cols=236 Identities=19% Similarity=0.197 Sum_probs=187.7
Q ss_pred CCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhcc---CCCCCccEEEEEecCCccceeeecCCC
Q 011092 68 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL---RNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 68 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
||+|+||+||+|.. .++..||||++..... .....+..|..++..+ +||||+.+++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 59999999999995 4589999999964321 1233455677777665 699999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 216 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~ 216 (494)
|+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++..... .....
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999886 3456999999999999999999999999 99999999999999999999999999875322 22456
Q ss_pred cCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 217 ~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
||+.|+|||++.+. .++.++|||||||++|+|+||+.||................. ... ....+..+.+++.+|
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~---~~~~~~~~~~li~~~ 232 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV--RFP---KNVLSDEGRQFVKGL 232 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC--CCC---CccCCHHHHHHHHHH
Confidence 89999999998764 478999999999999999999999876543322221111100 010 113457899999999
Q ss_pred ccCCCCCCCC----hHHHHH
Q 011092 296 LQYEPRERPN----PKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rps----~~~vl~ 311 (494)
|+.||.+||+ +.++++
T Consensus 233 L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 233 LNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cCCCHHHCCCCCCCHHHHhc
Confidence 9999999984 555554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=300.80 Aligned_cols=244 Identities=18% Similarity=0.217 Sum_probs=201.1
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+++++.||.|++|.||++.. .++..||||.+...... ....+..|++++++++||||+++++.+..++..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 45667779999999999994 46889999999754322 3567889999999999999999999999889999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCCCC---Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~---~~ 214 (494)
++++|.+++.......+++..+..++.+++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 9999999997544556899999999999999999999999 9999999999999855 46899999998765433 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..++..|+|||.+.+..++.++||||||+++|+|++|+.|+................ ....+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~ 235 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-----FAPISDRYSPDLRQLILS 235 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-----CCCCCCCcCHHHHHHHHH
Confidence 457889999999998888999999999999999999998886543322221111111 112233456789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.+|.+|||+.+++.
T Consensus 236 ~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 236 MLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HccCChhhCCCHHHHhh
Confidence 99999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=311.31 Aligned_cols=239 Identities=19% Similarity=0.273 Sum_probs=196.3
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHH
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~ 144 (494)
..||.|+||.||++.. .++..||||.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 4579999999999995 458899999987655444667899999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----CccccCCC
Q 011092 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLA 220 (494)
Q Consensus 145 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 220 (494)
+++. ...+++..+..++.||+.||.|||+++ ++||||||+||++++++.++|+|||++...... ....++..
T Consensus 108 ~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 183 (292)
T cd06658 108 DIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPY 183 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCcc
Confidence 9884 346899999999999999999999999 999999999999999999999999988654322 23457889
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 300 (494)
|+|||.+.+..++.++||||||++++||++|+.|+................ .... ......+..+.+++.+||..||
T Consensus 184 y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~~l~~~P 260 (292)
T cd06658 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL-PPRV--KDSHKVSSVLRGFLDLMLVREP 260 (292)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCcc--ccccccCHHHHHHHHHHccCCh
Confidence 999999988889999999999999999999999886543221111110111 1111 1112345689999999999999
Q ss_pred CCCCChHHHHH
Q 011092 301 RERPNPKSLVT 311 (494)
Q Consensus 301 ~~Rps~~~vl~ 311 (494)
.+|||+.++++
T Consensus 261 ~~Rpt~~~il~ 271 (292)
T cd06658 261 SQRATAQELLQ 271 (292)
T ss_pred hHCcCHHHHhh
Confidence 99999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=302.04 Aligned_cols=244 Identities=16% Similarity=0.215 Sum_probs=202.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+++.||.|+||.||++.. .+|+.||+|.+..... ...+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 45677789999999999994 5689999999865322 23457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----c
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 214 (494)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 9999999986544456899999999999999999999999 9999999999999999999999999987654432 3
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+++.|+|||++.+...+.++|+||||+++++|++|+.|+................ ....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----YPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----CCCCcccCCHHHHHHHHH
Confidence 457888999999988889999999999999999999998876543322221111111 112234556789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.+|.+||++.++++
T Consensus 236 ~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 236 LFKRNPRDRPSVNSILE 252 (256)
T ss_pred HhhCChhhCcCHHHHhh
Confidence 99999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=325.76 Aligned_cols=241 Identities=20% Similarity=0.213 Sum_probs=190.0
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+.+.+.||.|+||.||++... +++.||||... ...+.+|++++++++|||||++++++..++..++|||++.
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 566778899999999999965 48899999643 2346789999999999999999999999999999999995
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC------Cc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KS 214 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~ 214 (494)
++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 244 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 244 SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 788888854 2347999999999999999999999999 999999999999999999999999998754322 13
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch------------hHHhhhcccc--ccccc------
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------------LDLIRDRNLQ--MLTDS------ 274 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~------------~~~~~~~~~~--~~~~~------ 274 (494)
..||+.|+|||++.+..++.++|||||||++|||++|..++.... ...+...... .....
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 458999999999998889999999999999999999875543211 1111111100 00000
Q ss_pred -----------cccCCCC-----chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 -----------CLEGQFT-----DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 -----------~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
......+ ...+..+.+||.+||+.||.+|||+.|+++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 0000000 023357889999999999999999999997
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=309.17 Aligned_cols=248 Identities=18% Similarity=0.263 Sum_probs=200.2
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
++++++.||.|+||.||++... ++..||+|.+..... .....+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4678889999999999999964 689999999865422 22457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCCC--CCc
Q 011092 139 PNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~ 214 (494)
++++|..++.... ...+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.++|+|||++..... ...
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999998886321 23789999999999999999999974 7 99999999999999999999999999876533 233
Q ss_pred cccCCCcCCCcCCCCCC------CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 215 YSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~------~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
..++..|+|||.+.+.. ++.++|+|||||++|+|++|+.||........... ...+... .....+..++.++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 238 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVDG-DPPTLPSGYSDDA 238 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH-HHHHhhc-CCCCCCcccCHHH
Confidence 45778999999986543 48899999999999999999998865432221111 0111111 1123344567899
Q ss_pred HHHHHHHccCCCCCCCChHHHHH
Q 011092 289 VRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+++.+||+.+|.+||++.+++.
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhc
Confidence 99999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=303.50 Aligned_cols=243 Identities=18% Similarity=0.246 Sum_probs=197.9
Q ss_pred cccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.+.||.|+||.||+|...++..+|||.+...... ....+.+|++++++++|+||+++++++...+..++|||
T Consensus 3 ~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (265)
T cd06631 3 TKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFME 82 (265)
T ss_pred cccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEe
Confidence 455667999999999999878899999998653321 12458899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
|+++++|.+++.. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (265)
T cd06631 83 FVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG 159 (265)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence 9999999999963 356889999999999999999999999 99999999999999999999999998865321
Q ss_pred -----CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 212 -----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 212 -----~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
.....++..|+|||++.+..++.++||||||+++++|++|..||.............. ........+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 236 (265)
T cd06631 160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGA---HRGLMPRLPDSFSA 236 (265)
T ss_pred cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhh---ccCCCCCCCCCCCH
Confidence 1234578899999999988899999999999999999999988854221111000000 00111223445668
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+++.+||+.+|.+||++.+++.
T Consensus 237 ~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 237 AAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhc
Confidence 8999999999999999999999976
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=307.23 Aligned_cols=242 Identities=18% Similarity=0.287 Sum_probs=198.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+..++.||.|+||.||+|.. .++..||+|.+...... ..+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 34556679999999999985 45789999998754322 24578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 215 (494)
+++|.+++. ...+++..+..++.|++.||.|||+++ ++|+||+|+||++++++.++|+|||++....... ..
T Consensus 86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999999884 457899999999999999999999999 9999999999999999999999999987654322 23
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.++..|+|||++.+..++.++||||||++++||+||+.|+........... +. .......+...+..+.+++.+|
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL----IP-KNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh----hh-cCCCCCCCcccCHHHHHHHHHH
Confidence 568899999999988899999999999999999999988754321111110 10 0111122334567899999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011092 296 LQYEPRERPNPKSLVTA 312 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~ 312 (494)
|+.+|.+||++.+++..
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 237 LNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCCcccCcCHHHHHHh
Confidence 99999999999999973
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=304.66 Aligned_cols=243 Identities=18% Similarity=0.268 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+..++.||.|+||.||+|.. .++..||+|.+..... .....+.+|+.+++++.||||+++++++..++..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 355667889999999999995 4588999999875432 23567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
+|++|.+++. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 85 GGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 9999999885 356899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..++..|+|||++.+..++.++||||||+++|||+||..|+............ ........+...+..+.+++.+
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-----PKNNPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-----hcCCCCCCchhhhHHHHHHHHH
Confidence 35678899999998888999999999999999999999887643322111111 1111123344567889999999
Q ss_pred HccCCCCCCCChHHHHHH
Q 011092 295 CLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~ 312 (494)
||+.+|.+||++.+++..
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 236 CLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HcccCcccCcCHHHHHhC
Confidence 999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=311.08 Aligned_cols=245 Identities=20% Similarity=0.207 Sum_probs=199.5
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+++++.||.|++|.||++... ++..||+|.+...... ..+.+..|++++..++||||+++++++..++..++||||
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 82 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY 82 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence 456677799999999999954 5899999999765432 345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 212 (494)
+.|++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 99999999987544567999999999999999999999999 999999999999999999999999987643211
Q ss_pred ----------------------------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh
Q 011092 213 ----------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 264 (494)
Q Consensus 213 ----------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~ 264 (494)
....|+..|+|||++.+..++.++||||||+++|+|++|+.||.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~ 241 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF 241 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence 1235678899999999888999999999999999999999998654332211
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCC----hHHHHH
Q 011092 265 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSLVT 311 (494)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~vl~ 311 (494)
...... ..........+..+.+++.+||..+|++||| +.+++.
T Consensus 242 ~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 242 SNILKK----EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHhcC----CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 111111 0000111125689999999999999999999 777766
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=314.49 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=195.9
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++++++.||+|+||.||++... +++.||+|++.... ......|..|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 4567778899999999999954 47899999986421 1123457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 2356899999999999999999999999 999999999999999999999999998654322
Q ss_pred -CccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 213 -KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....||+.|+|||++. ...++.++|||||||++|||++|+.||..................... ......++.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccC-CCccccCCH
Confidence 1246899999999986 345788999999999999999999998765432222211111100001 111234568
Q ss_pred HHHHHHHHHccCCCCC--CCChHHHHHH
Q 011092 287 ELVRLASRCLQYEPRE--RPNPKSLVTA 312 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~--Rps~~~vl~~ 312 (494)
++.+++.+||..++.+ |+++.++++.
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 8999999999765554 6889998864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=302.83 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=200.5
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+++.+.+|.|+||+||+|.. .++..|++|++..... .....+.+|+++++.++|+||+++++.+..++..++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 345667779999999999994 4688999999975432 24567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 139 PNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999974322 56899999999999999999999999 9999999999999999999999999887544322
Q ss_pred ----ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCC-CCchhHHH
Q 011092 214 ----SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ-FTDDDGTE 287 (494)
Q Consensus 214 ----~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 287 (494)
...++..|++||++... .++.++||||||+++++|++|+.|+................. ...... .....+..
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 239 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDP-PSLETGADYKKYSKS 239 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCC-CCcCCccccccccHH
Confidence 23578899999998876 689999999999999999999988754322111111111111 111111 11345688
Q ss_pred HHHHHHHHccCCCCCCCChHHHHH
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+++.+||..||.+|||+.+++.
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 240 FRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhh
Confidence 999999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=319.52 Aligned_cols=243 Identities=16% Similarity=0.187 Sum_probs=194.1
Q ss_pred cccccccCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.+++++.||.|+||.||++... .+..||+|.+... ..+.+|++++++++||||+++++++...+..++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 4778888999999999999743 3578999998643 2456899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 212 (494)
+. ++|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 96 78888884 4567999999999999999999999999 999999999999999999999999998754432
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH----Hhh---hc-c--ccccc---------
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIR---DR-N--LQMLT--------- 272 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~----~~~---~~-~--~~~~~--------- 272 (494)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .+. .. . .....
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 2346899999999999888999999999999999999999988653211 000 00 0 00000
Q ss_pred ------cc-cccCCC-----CchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 273 ------DS-CLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 273 ------~~-~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
.. ...... ....+.++.++|.+||..||++|||+.+++..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000 11235678899999999999999999999983
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=303.88 Aligned_cols=246 Identities=19% Similarity=0.243 Sum_probs=195.6
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--C--------hHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--D--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~--------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
.+.+.||.|+||.||+|.. .+|..||+|.++..... . .+.+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (272)
T cd06629 4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYL 83 (272)
T ss_pred eecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCce
Confidence 3456679999999999984 46899999998542111 0 23578899999999999999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||+|+||+++.++.++|+|||++.....
T Consensus 84 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 84 SIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred EEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 999999999999999974 357899999999999999999999999 99999999999999999999999999875443
Q ss_pred C------CccccCCCcCCCcCCCCCC--CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCch
Q 011092 212 G------KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 212 ~------~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
. ....++..|+|||.+.... ++.++||||||++++++++|..|+............................
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMN 240 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccccc
Confidence 2 2345788999999987654 7899999999999999999998875432211111111111111111222234
Q ss_pred hHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 284 DGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
++..+.+++.+||..+|..|||+.+++.
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 241 LSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 5688999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=304.14 Aligned_cols=250 Identities=19% Similarity=0.254 Sum_probs=202.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCC----EEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++++++.||+|+||.||+|... +|. .||+|.+...... ....+.+|+.++.+++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v 86 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI 86 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence 4566778899999999999853 343 6899988765432 24578899999999999999999999987 788999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 214 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 214 (494)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.......
T Consensus 87 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 87 TQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 999999999999864 2346899999999999999999999998 99999999999999999999999999876543221
Q ss_pred ------cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 215 ------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 215 ------~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
..++..|+|||.+....++.++|+||||++++|+++ |+.|+.......+........ ....+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 239 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-----RLPQPPICTID 239 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-----CCCCCCCCCHH
Confidence 122467999999988889999999999999999999 888876544333322111110 11122334568
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
+.+++.+||..+|..||++.++++.|..+.+
T Consensus 240 ~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 240 VYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=304.22 Aligned_cols=242 Identities=23% Similarity=0.353 Sum_probs=195.4
Q ss_pred cCCCCCCCeEEEEEEcC-------CCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 67 EHGEKAPNVVYKGKLEN-------QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.||.|+||.||+|...+ +..|+||.+..... .....|.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 46999999999998532 25799999865432 23567899999999999999999999999989999999999
Q ss_pred CCCCHHHHhcccC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-----CeEEcccCCccc
Q 011092 139 PNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMKN 208 (494)
Q Consensus 139 ~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-----~~kl~Dfgla~~ 208 (494)
++++|.+++.... ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++ .++|+|||++..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999996421 234788999999999999999999999 99999999999999877 899999999875
Q ss_pred CCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 209 SRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 209 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
.... ....++..|+|||++.++.++.++||||||+++|+|+| |..|+............. .......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-----AGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-----cCCccCCc
Confidence 4322 12234678999999998889999999999999999998 887775432221111110 00111233
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456788999999999999999999999999885
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=309.77 Aligned_cols=249 Identities=18% Similarity=0.159 Sum_probs=200.0
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+++++.||.|+||.||++... +++.|++|.+..... .....+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 3456677799999999999954 588999999876432 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
|++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999963 356899999999999999999999999 99999999999999999999999998763210
Q ss_pred --------------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccccccc
Q 011092 212 --------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 212 --------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (494)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||.+.....+.......... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~---~ 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---W 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---C
Confidence 01234677899999998888999999999999999999999998765433322222111100 0
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcc
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
.......+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 01112456789999999999999999997666666654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-39 Score=307.42 Aligned_cols=248 Identities=20% Similarity=0.258 Sum_probs=194.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+++.||.|++|.||+|.. .++..||||.++..... ....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 45677789999999999995 46899999998654322 2467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 139 PNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
+ ++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 7 68888886433 357899999999999999999999999 999999999999999999999999998754322 1
Q ss_pred ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------------ccc------
Q 011092 214 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------MLT------ 272 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~--------------~~~------ 272 (494)
...+++.|+|||.+.+. .++.++||||||+++++|+||+.||.............. ...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 23457889999988654 468899999999999999999988764321110000000 000
Q ss_pred cc---cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 DS---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. ..........+.++.+++.+||+.||.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0000112235678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=287.58 Aligned_cols=248 Identities=20% Similarity=0.281 Sum_probs=199.3
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC-CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+.+.++.+|.|+.|+|+++++ .+|...|||.+.+.. ....++++..++++... ..|.||+.+|+|..+...++.|
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 34567788999999999999995 458999999997654 33466788888887776 4899999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 213 (494)
|.|. ..++.++. +-.+++++..+-++...++.||.||..+..|+|||+||+|||+|+.|++||||||++....+..
T Consensus 171 elMs-~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 171 ELMS-TCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HHHH-HHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 9993 44555443 3567899999999999999999999987669999999999999999999999999987765543
Q ss_pred -ccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh-hccccccccccccCCCCchhHHHH
Q 011092 214 -SYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-DRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
...|-+.|||||.+.- ..|+.++||||||++|+||.||..|+.+...+..- .......+ +.++.. ...++.+
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~--~gFSp~F 325 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGH--MGFSPDF 325 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCcc--cCcCHHH
Confidence 3457789999999864 34889999999999999999999999874333211 11222111 222221 2267899
Q ss_pred HHHHHHHccCCCCCCCChHHHHH
Q 011092 289 VRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+++..||++|+.+||.+.++++
T Consensus 326 ~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 326 QSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHHHHhhcCcccCcchHHHhc
Confidence 99999999999999999999987
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=317.03 Aligned_cols=247 Identities=19% Similarity=0.276 Sum_probs=193.2
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecC------Cc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~ 130 (494)
..+.+++.||.|+||+||+|.. .++..||||.+..... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 4566778889999999999994 5688999999975322 1245678999999999999999999988643 34
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 95 ~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 95 VYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred EEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecC
Confidence 68999998 789998874 456999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------ccccc---
Q 011092 211 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTDS--- 274 (494)
Q Consensus 211 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-----------~~~~~--- 274 (494)
.. ....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .+...
T Consensus 170 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07878 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHAR 249 (343)
T ss_pred CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHH
Confidence 43 34568999999999876 4688999999999999999999988865321110000000 00000
Q ss_pred ----ccc-------CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 ----CLE-------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ----~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... .......++.+.+|+.+||+.||.+|||+.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 250 KYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0001123456889999999999999999999996
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=300.82 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=200.4
Q ss_pred cccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+++...+|.|+||.||+|.... +..|++|.+..... .+.+.+|++++++++||||+++++++......++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 34566677999999999999654 88999999975432 6789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 215 (494)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 82 ~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 9999999864 2457899999999999999999999999 9999999999999999999999999987654332 33
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.++..|++||++.+..++.++||||||+++|+|++|+.|+.............. ........+...+..+.+++.+|
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCCCCchhhcCHHHHHHHHHH
Confidence 468899999999888899999999999999999999988764322111100000 00011112334557899999999
Q ss_pred ccCCCCCCCChHHHHH
Q 011092 296 LQYEPRERPNPKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~ 311 (494)
|+.+|.+|||+.+++.
T Consensus 237 l~~~P~~Rps~~~il~ 252 (256)
T cd06612 237 LVKDPEERPSAIQLLQ 252 (256)
T ss_pred HhcChhhCcCHHHHhc
Confidence 9999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=310.02 Aligned_cols=242 Identities=16% Similarity=0.259 Sum_probs=183.3
Q ss_pred ccCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec--CCccceeeecCCC
Q 011092 66 SEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAEYMPN 140 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~lv~e~~~~ 140 (494)
.+||+|+||+||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 46799999999999853 46789999987543 23467899999999999999999999864 345789999996
Q ss_pred CCHHHHhccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee----cCCCCeEEcccCCcccC
Q 011092 141 ETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 141 gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 209 (494)
++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 6888877521 1235889999999999999999999999 9999999999999 45678999999999765
Q ss_pred CCC-------CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHH----------hh---h---
Q 011092 210 RDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------IR---D--- 265 (494)
Q Consensus 210 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~----------~~---~--- 265 (494)
... ....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||....... +. .
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 322 234678999999998764 48899999999999999999998875321100 00 0
Q ss_pred -------cccccccc----------cccc--------CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 266 -------RNLQMLTD----------SCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 266 -------~~~~~~~~----------~~~~--------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
........ .... .......+..+.+++.+||+.||.+|||++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 0000 0000112346889999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=309.40 Aligned_cols=240 Identities=20% Similarity=0.258 Sum_probs=198.0
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHH
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~ 144 (494)
..||.|+||.||++.. .++..||+|.+........+.+.+|+.++..++||||+++++++..++..++||||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 4679999999999995 468999999997655445677889999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----CccccCCC
Q 011092 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLA 220 (494)
Q Consensus 145 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 220 (494)
+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..
T Consensus 107 ~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 182 (297)
T cd06659 107 DIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPY 182 (297)
T ss_pred HHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCcc
Confidence 9874 356899999999999999999999999 999999999999999999999999998654322 23467899
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 300 (494)
|+|||++.+..++.++||||||++++||++|+.||............ ..... .........+..+.+++.+||+.+|
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~P 259 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-RDSPP--PKLKNAHKISPVLRDFLERMLTREP 259 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-hccCC--CCccccCCCCHHHHHHHHHHhcCCc
Confidence 99999999888999999999999999999999887543221111110 00000 0111223455789999999999999
Q ss_pred CCCCChHHHHHH
Q 011092 301 RERPNPKSLVTA 312 (494)
Q Consensus 301 ~~Rps~~~vl~~ 312 (494)
.+||++.++++.
T Consensus 260 ~~Rps~~~ll~~ 271 (297)
T cd06659 260 QERATAQELLDH 271 (297)
T ss_pred ccCcCHHHHhhC
Confidence 999999999983
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=307.73 Aligned_cols=250 Identities=20% Similarity=0.295 Sum_probs=197.5
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCC----EEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
++.++.||+|+||.||+|.. .+|. .||+|.+....... ...+.+|+.+++.++||||+++++++... ..++++
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~ 87 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT 87 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeee
Confidence 34567789999999999984 3454 57899887543322 34688999999999999999999998754 567999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 213 (494)
||+++|+|.+++.. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++......
T Consensus 88 e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 165 (303)
T cd05110 88 QLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 165 (303)
T ss_pred hhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccc
Confidence 99999999999864 2346889999999999999999999999 9999999999999999999999999987654321
Q ss_pred ----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 214 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 214 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
...++..|++||++.+..++.++||||||+++|||++ |+.|+............... .....+...+..+
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 240 (303)
T cd05110 166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-----ERLPQPPICTIDV 240 (303)
T ss_pred cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHH
Confidence 1234678999999988889999999999999999998 77777554322221111000 0001122345689
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+++..||..+|.+||++.++++.|..+...
T Consensus 241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 241 YMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999887554
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=306.05 Aligned_cols=242 Identities=18% Similarity=0.280 Sum_probs=205.5
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
|.+-+-||+|-|.+|-+|+ .-+|..||||++.+..... ...+.+|+..|+.++|||||+||.+......+|||+|.=
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 3344566999999999998 4579999999998765444 457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEcccCCcccCCCC---Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~ 214 (494)
++|+|.+++.+.. ..+.++...+++.||..|+.|+|+.. +|||||||+||++- .-|-+||.|||++-.+..+ .+
T Consensus 100 D~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 9999999997643 46999999999999999999999998 99999999999875 6799999999998776655 46
Q ss_pred cccCCCcCCCcCCCCCCCC-CCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~-~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
.+|++.|.|||.+.|..|+ ++.||||||||||-|++|+.||............+ + | .-..|..++.+..+||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm----D-C-KYtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM----D-C-KYTVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh----c-c-cccCchhhhHHHHHHHH
Confidence 7899999999999998885 58999999999999999999886533222211111 1 1 12457788999999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
.||..||++|.|.++|..
T Consensus 252 sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVS 269 (864)
T ss_pred HHHhcCchhhccHHHHhc
Confidence 999999999999999986
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=302.59 Aligned_cols=249 Identities=20% Similarity=0.306 Sum_probs=199.1
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+.++..||.|+||.||+|... +...|++|.+...... ....+.+|++++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence 4556777899999999999953 2467999998654433 24679999999999999999999999999899999
Q ss_pred eeecCCCCCHHHHhcccCC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 134 VAEYMPNETLAKHLFHWET-------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
||||+++++|.+++..... ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||++
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccc
Confidence 9999999999999974331 26899999999999999999999999 999999999999999999999999997
Q ss_pred ccCCCC-----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCC
Q 011092 207 KNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 207 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (494)
...... ....++..|++||.+.+...+.++||||||+++++|++ |..||............ .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~ 240 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL----QAGKLELPV 240 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH----HcCCcCCCC
Confidence 643321 22344677999999988888999999999999999999 66666432221111111 111111112
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
+...+..+.+++.+||+.+|.+|||+.+++..|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=299.56 Aligned_cols=244 Identities=28% Similarity=0.417 Sum_probs=199.0
Q ss_pred ccccCCCCCCCeEEEEEEcC-C----CEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 64 IVSEHGEKAPNVVYKGKLEN-Q----RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+++.+|.|+||.||++.... + ..||+|.+...... ..+.+..|+.++..++||||+++++++...+..+++|||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 55677999999999999543 3 88999999765543 466899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc---
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 214 (494)
+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK 161 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence 99999999997433323899999999999999999999999 99999999999999999999999999876554321
Q ss_pred --cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 215 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 215 --~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
..+++.|++||.+.+..++.++||||||+++++|++ |..|+................ ....+...+..+.++
T Consensus 162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 236 (258)
T smart00219 162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-----RLPKPENCPPEIYKL 236 (258)
T ss_pred ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-----CCCCCCcCCHHHHHH
Confidence 225688999999988889999999999999999999 666665432222211111111 112233456789999
Q ss_pred HHHHccCCCCCCCChHHHHHHh
Q 011092 292 ASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~~L 313 (494)
+.+||..+|.+|||+.++++.|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=302.61 Aligned_cols=249 Identities=22% Similarity=0.277 Sum_probs=199.3
Q ss_pred ccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+.+...||.|+||.||+|...+ ...|+||...... ....+.|..|+.+++.++||||+++++++.. +..++|||
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e 86 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVME 86 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEE
Confidence 4456677999999999998533 2478999986544 2235678999999999999999999999875 56789999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
|+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 87 LAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred cCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 99999999999642 345899999999999999999999999 9999999999999999999999999987654332
Q ss_pred --ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 214 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
...++..|+|||.+....++.++||||||+++++|++ |..||............... .....+..++..+.+
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 239 (270)
T cd05056 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTLYS 239 (270)
T ss_pred cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHH
Confidence 1223467999999988889999999999999999986 88887654322211111000 011123455678999
Q ss_pred HHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 291 LASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
++.+||..+|.+|||+.+++..|+.+..
T Consensus 240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 240 LMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=305.46 Aligned_cols=248 Identities=21% Similarity=0.292 Sum_probs=196.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.++++..||.|++|.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 3567778899999999999965 589999999865432 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
+++++|..++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988888765 3446899999999999999999999999 9999999999999999999999999987654432
Q ss_pred ccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh---ccc-----------------cccc
Q 011092 214 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNL-----------------QMLT 272 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~---~~~-----------------~~~~ 272 (494)
...++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... ... ....
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456789999999876 457889999999999999999998886432111000 000 0000
Q ss_pred cccccCC-----CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 DSCLEGQ-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+..... .....+..+.+++.+||+.+|++|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000 01234678999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=304.88 Aligned_cols=242 Identities=20% Similarity=0.254 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.+++.||.|++|.||++... +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 4567778899999999999954 589999999865322 234668899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Ccc
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 215 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 215 (494)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999864 367899999999999999999999999 999999999999999999999999998765443 344
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.+++.|+|||.+.+...+.++||||||+++++|++|..|+............... ....+...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHH
Confidence 6788999999998888899999999999999999999887654322211111110 1123344568899999999
Q ss_pred ccCCCCCCC-----ChHHHHH
Q 011092 296 LQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rp-----s~~~vl~ 311 (494)
|..+|.+|+ ++.+++.
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ccCCHHHccCcccCCHHHHHc
Confidence 999999998 6677764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=305.04 Aligned_cols=244 Identities=20% Similarity=0.238 Sum_probs=197.5
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+..+..||.|+||.||+|.. .++..||+|.+....... .+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 96 (307)
T cd06607 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY 96 (307)
T ss_pred hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHh
Confidence 55667789999999999995 468999999986543322 34688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 217 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 217 (494)
++ |+|.+.+.. ...++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++..........+
T Consensus 97 ~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (307)
T cd06607 97 CL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVG 173 (307)
T ss_pred hC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCccC
Confidence 97 677777643 2456899999999999999999999999 99999999999999999999999999887666666778
Q ss_pred CCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 218 NLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 218 t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
++.|+|||++. ...++.++||||||+++|+|+||..|+............... ......+...+..+.+++.+
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~ 249 (307)
T cd06607 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLSSNDWSDYFRNFVDS 249 (307)
T ss_pred CccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----CCCCCCchhhCHHHHHHHHH
Confidence 89999999874 355888999999999999999999887543221111100000 00111122355789999999
Q ss_pred HccCCCCCCCChHHHHHH
Q 011092 295 CLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~ 312 (494)
||+.+|.+||++.+++..
T Consensus 250 ~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 250 CLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HhcCChhhCcCHHHHhcC
Confidence 999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=305.13 Aligned_cols=240 Identities=19% Similarity=0.267 Sum_probs=197.5
Q ss_pred cccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 65 VSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
...||.|++|.||++.. .++..|++|++........+.+.+|+.+++.++||||+++++++..++..++|+||++|++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 34569999999999995 46889999998765444466789999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----CccccCC
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNL 219 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 219 (494)
.+++.. .++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....+++
T Consensus 104 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 104 TDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 999853 56899999999999999999999999 999999999999999999999999987654322 2345788
Q ss_pred CcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCC
Q 011092 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299 (494)
Q Consensus 220 ~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (494)
.|+|||.+.+..++.++||||||+++++|++|..|+............... .... ...+...+..+.+++.+||+.+
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~l~~li~~~l~~~ 256 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPK--LKNLHKVSPRLRSFLDRMLVRD 256 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCC--CcccccCCHHHHHHHHHHcccC
Confidence 999999998888999999999999999999999887553222111111111 1111 1112235678999999999999
Q ss_pred CCCCCChHHHHH
Q 011092 300 PRERPNPKSLVT 311 (494)
Q Consensus 300 p~~Rps~~~vl~ 311 (494)
|++|||+.++++
T Consensus 257 p~~Rpt~~~il~ 268 (285)
T cd06648 257 PAQRATAAELLN 268 (285)
T ss_pred hhhCcCHHHHcc
Confidence 999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=308.70 Aligned_cols=244 Identities=25% Similarity=0.410 Sum_probs=197.5
Q ss_pred ccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCCh--HHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
|++++.||+|+||+||++.... +..||+|.+........ ....+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4677888999999999999654 67999999987653222 23456999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccC----CCCCc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 214 (494)
++++|.+++. ....+++..+..++.||+.||.+||+++ ++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9889999996 3467899999999999999999999999 999999999999999999999999998752 12234
Q ss_pred cccCCCcCCCcCCC-CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH----HhhhccccccccccccCCCCchhHHHHH
Q 011092 215 YSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 215 ~~~t~~y~aPE~~~-~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
..++..|+|||++. +...+.++||||||+++++|++|..|+...... ............. ..........+.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 234 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS---SQQSREKSEELR 234 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH---TTSHTTSHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc---ccccchhHHHHH
Confidence 56788999999998 778999999999999999999999888764111 1111111111110 011111237899
Q ss_pred HHHHHHccCCCCCCCChHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+++.+||+.||++|||+.++++
T Consensus 235 ~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 235 DLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHccCChhHCcCHHHHhc
Confidence 9999999999999999999986
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=299.76 Aligned_cols=252 Identities=16% Similarity=0.169 Sum_probs=197.9
Q ss_pred HHHHHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEe
Q 011092 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCC 126 (494)
Q Consensus 49 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~ 126 (494)
..++....++|...+.++ +|.|+||.||++.. .++..+|+|.+........ |+.....+ +||||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe
Confidence 345555556666555554 69999999999994 5688999999875432211 22222222 7999999999999
Q ss_pred cCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCC
Q 011092 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGL 205 (494)
Q Consensus 127 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl 205 (494)
.++..++||||+++++|.+++.. ..++++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .++|+|||+
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 99999999999999999999963 347999999999999999999999999 99999999999999888 999999999
Q ss_pred cccCCCCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 206 MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 206 a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
+..........++..|+|||++.+..++.++||||||+++++|++|+.|+.................. .....+...+
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 234 (267)
T PHA03390 157 CKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNVS 234 (267)
T ss_pred ceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCcccccC
Confidence 88776666677899999999999888999999999999999999999888643221111011111111 1112233566
Q ss_pred HHHHHHHHHHccCCCCCCCC-hHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPN-PKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps-~~~vl~ 311 (494)
..+.+++.+||+.+|.+||+ ++++++
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 235 KNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHHHHHhccChhhCCchHHHHhc
Confidence 88999999999999999995 688875
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=305.77 Aligned_cols=245 Identities=20% Similarity=0.269 Sum_probs=201.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+.+++.||.|+||.||++.. .++..|++|.+........+.+..|+.+++.++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 4556777889999999999984 468899999987654445677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 99 ~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (293)
T cd06647 99 AGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174 (293)
T ss_pred CCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceeccccccccccc
Confidence 9999999985 346889999999999999999999999 999999999999999999999999987654332 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+++.|++||.+.+..++.++||||||+++|++++|+.||........... ...........+...+..+.+++.+
T Consensus 175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~ 251 (293)
T cd06647 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFRDFLNR 251 (293)
T ss_pred ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee---hhcCCCCCCCCccccCHHHHHHHHH
Confidence 3577889999999888899999999999999999999998865432111000 0001111111233456789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||..+|++||++.+++.
T Consensus 252 ~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 252 CLEMDVEKRGSAKELLQ 268 (293)
T ss_pred HccCChhhCcCHHHHhc
Confidence 99999999999999996
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=303.68 Aligned_cols=255 Identities=15% Similarity=0.219 Sum_probs=198.7
Q ss_pred CHHHHHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEE
Q 011092 48 TLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCC 125 (494)
Q Consensus 48 ~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~ 125 (494)
++.++....+.| +++..+|.|+||.||+|.. .++..||+|.+.... .....+..|+.++.++ +||||+++++++
T Consensus 7 ~~~~~~~~~~~~---~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIF---ELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhh---hhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 344444444444 4556669999999999995 568899999986543 2345788899999999 799999999998
Q ss_pred ec------CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeE
Q 011092 126 CE------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199 (494)
Q Consensus 126 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~k 199 (494)
.. .+..+++|||+++++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEE
Confidence 53 456799999999999999997545566889999999999999999999999 99999999999999999999
Q ss_pred EcccCCcccCCC----CCccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc
Q 011092 200 LSTFGLMKNSRD----GKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 270 (494)
Q Consensus 200 l~Dfgla~~~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~ 270 (494)
|+|||++..... .....++..|+|||.+. ...++.++|||||||++|+|++|..||.......... .
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~----~ 237 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF----L 237 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh----h
Confidence 999999875432 23456788999999875 3457889999999999999999998875432111100 0
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..............+..+.+++.+||+.||.+|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11111111122345678999999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=303.40 Aligned_cols=247 Identities=22% Similarity=0.303 Sum_probs=197.0
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+.+.||.|++|.||+|.. .+|..|++|++..... .....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 56677889999999999995 4689999999976542 23567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 213 (494)
+++|.+++... ..++++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 -~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 82 -PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred -CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99999998642 367999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------------------ccc
Q 011092 214 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLT 272 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~--------------------~~~ 272 (494)
...++..|+|||.+.+.. ++.++||||||+++++|+||.+++.............. .+.
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 345788999999986544 68899999999999999999766654321110000000 000
Q ss_pred ccc----ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 DSC----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ~~~----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... .........+..+.+++.+||+.+|.+|||+++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000 000111234588999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=298.79 Aligned_cols=243 Identities=18% Similarity=0.185 Sum_probs=193.4
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHH-hccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+.+|.|+||.||+|.. .+|+.||||.+....... ...+..|..++ ...+||||+++++++..++..++||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4579999999999995 458999999986543211 22344555444 455899999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCccccCCC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 220 (494)
++|.+++.. ..++++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........++..
T Consensus 82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 999999863 356899999999999999999999999 99999999999999999999999999887665556678899
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 300 (494)
|++||.+.+..++.++||||||+++++|++|..|+................. .........++..+.+++.+||+.+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--NWPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CCCCcccccCCHHHHHHHHHHccCCH
Confidence 9999999888889999999999999999999998865433322211111100 01112223456889999999999999
Q ss_pred CCCCChHHHHHHh
Q 011092 301 RERPNPKSLVTAL 313 (494)
Q Consensus 301 ~~Rps~~~vl~~L 313 (494)
.+||++.++.+.|
T Consensus 237 ~~R~~~~~~~~~l 249 (260)
T cd05611 237 AKRLGANGYQEIK 249 (260)
T ss_pred HHccCCCcHHHHH
Confidence 9999876555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=301.81 Aligned_cols=257 Identities=14% Similarity=0.192 Sum_probs=197.7
Q ss_pred HHHHHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEe
Q 011092 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCC 126 (494)
Q Consensus 49 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~ 126 (494)
++.+....++| ++++.||+|+||.||++.. .+++.||+|++.... .....+..|+.++..+ +||||+++++++.
T Consensus 10 ~~~~~~~~~~~---~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 10 FDSFPDPSDTW---EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eecCCCcccce---eeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 34444455555 4666779999999999995 458899999986533 2245688899999999 7999999999884
Q ss_pred -----cCCccceeeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeE
Q 011092 127 -----EGDERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199 (494)
Q Consensus 127 -----~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~k 199 (494)
.++..++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEE
Confidence 345689999999999999987532 2356889999999999999999999998 99999999999999999999
Q ss_pred EcccCCcccCCCC----CccccCCCcCCCcCCCC-----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc
Q 011092 200 LSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 270 (494)
Q Consensus 200 l~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~ 270 (494)
|+|||++...... ....+++.|+|||++.. ..++.++|||||||++|+|++|+.|+...............
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~ 244 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN 244 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc
Confidence 9999998754332 23457899999998853 44788999999999999999999887543211111000000
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHh
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
. ......+...+..+.+++.+||+.||++|||+.++++.+
T Consensus 245 -~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 245 -P--PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred -C--CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 001112223456899999999999999999999998743
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=298.07 Aligned_cols=248 Identities=17% Similarity=0.276 Sum_probs=198.0
Q ss_pred ccccccCCCCCCCeEEEEEEcC--CCEEEEEEecCCCC----------CChHHHHHHHHHHhc-cCCCCCccEEEEEecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMAW----------PDPRQFLEEARSVGQ-LRNNRLTNLLGCCCEG 128 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~ 128 (494)
+.++..||.|+||.||++.... +..+|+|.+..... .....+.+|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 3455677999999999999644 78999999864221 123457788888875 6999999999999999
Q ss_pred CccceeeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCC
Q 011092 129 DERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 129 ~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
+..++||||++|++|.+++... ....+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999987531 34568999999999999999999996 66 99999999999999999999999999
Q ss_pred cccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc
Q 011092 206 MKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282 (494)
Q Consensus 206 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (494)
+...... ....++..|++||.+.+..++.++||||||+++|+|++|+.|+..................+ ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~ 236 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP----LPEG 236 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc----CCcc
Confidence 8765443 24457889999999998889999999999999999999998875443222221111111111 1111
Q ss_pred hhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 283 DDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
..+..+.+++.+||+.||.+||++.++..++.
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 34578999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=304.67 Aligned_cols=246 Identities=19% Similarity=0.243 Sum_probs=193.3
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+..++.||.|+||.||++.. .++..||+|.+...... ....+.+|+.++.++. ||||+++++++..++..+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 33456779999999999995 45899999998754322 3457889999999995 999999999999988999999999
Q ss_pred CCCCHHHHhc---ccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 139 PNETLAKHLF---HWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 139 ~~gsL~~~l~---~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
. ++|.++.. ......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++|+|||++......
T Consensus 86 ~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 86 D-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred c-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 6 56655432 22346799999999999999999999985 7 999999999999999999999999998754332
Q ss_pred -CccccCCCcCCCcCCCCC---CCCCCCCchhHHHHHHHHHhCCCCCCCchh--HHhhhccccccccccccCCCCchhHH
Q 011092 213 -KSYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~---~~~~~sDv~slG~vl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....++..|+|||++.+. .++.++||||||+++|+|++|+.||..... ..+... .. ...+......+...+.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 241 (288)
T cd06616 164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV-VK-GDPPILSNSEEREFSP 241 (288)
T ss_pred cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh-cC-CCCCcCCCcCCCccCH
Confidence 234578899999999766 588999999999999999999988764321 111111 00 1111112222234667
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+|+.+||+.+|.+|||+.+++.
T Consensus 242 ~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 242 SFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=303.38 Aligned_cols=251 Identities=18% Similarity=0.249 Sum_probs=197.1
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecC--Cccc
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 132 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~ 132 (494)
++..++++..||.|+||.||+|... +++.|++|.++...... ...+.+|+.++.+++||||+++++++... +..+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 3456677788899999999999964 58899999997543222 34577899999999999999999999877 7899
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||++ ++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 lv~e~~~-~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 83 MVMEYVE-HDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred EEehhcC-cCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 9999997 5999888642 346899999999999999999999999 999999999999999999999999998765443
Q ss_pred ----CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhc---------------------
Q 011092 213 ----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------------- 266 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~--------------------- 266 (494)
....+++.|+|||.+.+.. .+.++|+||||+++++|++|..||...........
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 2234678899999987644 68899999999999999999988754321111000
Q ss_pred ----cccccccccccCCCCch-hHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 267 ----NLQMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 267 ----~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.............++.. .+..+.+++.+||+.+|++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000011111122222 4678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=296.12 Aligned_cols=243 Identities=20% Similarity=0.296 Sum_probs=197.7
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
|.+.+.||.|+||.||+|.. .+++.|++|.++..... ..+.+..|+++++.++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 45567779999999999995 46899999999765543 4667899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 213 (494)
++++|.+++.. ...+++..+..|+.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 82 SGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred CCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 99999999863 345889999999999999999999999 9999999999999999999999999987654321
Q ss_pred ---ccccCCCcCCCcCCCCCC---CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc--hhH
Q 011092 214 ---SYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD--DDG 285 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 285 (494)
...+++.|++||++.+.. .+.++||||||+++++|++|..||............... ......+. ..+
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 234 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQLS 234 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCcccccC
Confidence 235678999999998766 889999999999999999999988543111100000000 00111222 236
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+++.+||+.+|.+|||+.+++.
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhc
Confidence 78899999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=297.51 Aligned_cols=241 Identities=22% Similarity=0.235 Sum_probs=197.3
Q ss_pred ccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-----CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 64 IVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-----PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
....||.|++|.||+|... ++..|++|.+..... ...+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEe
Confidence 3355699999999999965 789999999865432 1245788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Cc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 214 (494)
+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 84 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 84 VPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 999999999863 346899999999999999999999999 999999999999999999999999988764432 34
Q ss_pred cccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..|++||.+.... ++.++|+||||+++|+|++|..||............. ........+...+..+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG----RSKELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH----hcccCCCcCCCcCHHHHHHHH
Confidence 55788999999987666 8899999999999999999998875433111111100 000111234455688999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||+.+|.+||++.+++.
T Consensus 237 ~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 237 KCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHhhcCcccCcCHHHHhc
Confidence 999999999999999986
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=305.45 Aligned_cols=247 Identities=19% Similarity=0.234 Sum_probs=193.0
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+++++.||.|+||.||+|.. .+|..||+|.++..... ....+.+|+.++++++||||+++++++.+.+..++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 45667789999999999995 46899999999653221 2356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
+ ++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ..
T Consensus 82 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 D-QDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred C-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 7 688887754 2456999999999999999999999999 999999999999999999999999998765432 22
Q ss_pred cccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCc-hhHHhhhcc--------------cccccccccc-
Q 011092 215 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRN--------------LQMLTDSCLE- 277 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~-~~~~~~~~~--------------~~~~~~~~~~- 277 (494)
..++..|+|||++.+.. ++.++|||||||++|+|+||+.|+... ......... .....+....
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 35678999999987644 688999999999999999998875322 111000000 0000000000
Q ss_pred --------CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 --------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 --------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
......++.++.+++.+||+.||.+|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0112235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=306.77 Aligned_cols=242 Identities=16% Similarity=0.254 Sum_probs=182.6
Q ss_pred ccCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec--CCccceeeecCCC
Q 011092 66 SEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAEYMPN 140 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~lv~e~~~~ 140 (494)
..||+|+||.||+|... ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 35799999999999954 35789999987543 23467899999999999999999999854 456789999997
Q ss_pred CCHHHHhccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee----cCCCCeEEcccCCcccC
Q 011092 141 ETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 141 gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 209 (494)
++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 6787776421 1235889999999999999999999999 9999999999999 56689999999999765
Q ss_pred CCC-------CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh-------------h---
Q 011092 210 RDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-------------D--- 265 (494)
Q Consensus 210 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~-------------~--- 265 (494)
... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.....+... .
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 234578899999998764 4789999999999999999999887532110000 0
Q ss_pred ----cccc---------ccccc---------cc---cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 266 ----RNLQ---------MLTDS---------CL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 266 ----~~~~---------~~~~~---------~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.... ..... .. ...........+.+++.+||+.||.+|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0000 00000 00 00001112356888999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=303.79 Aligned_cols=248 Identities=18% Similarity=0.238 Sum_probs=199.8
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..++.||.|+||.||+++. .++..||+|.+...... ....+..|++++++++|||++++++++..++..++||||+
T Consensus 28 ~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 107 (317)
T cd06635 28 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC 107 (317)
T ss_pred hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCC
Confidence 3456679999999999995 46899999998754322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCccccC
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 218 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t 218 (494)
+ |+|.+.+.. ...++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++
T Consensus 108 ~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (317)
T cd06635 108 L-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGT 184 (317)
T ss_pred C-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCC
Confidence 7 578777653 3456899999999999999999999999 999999999999999999999999998877666667789
Q ss_pred CCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 219 LAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 219 ~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
+.|+|||++. .+.++.++||||||+++|+|++|+.||............... ..........+..+.+++.+|
T Consensus 185 ~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~ 260 (317)
T cd06635 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPTLQSNEWSDYFRNFVDSC 260 (317)
T ss_pred ccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc----cCCCCCCccccHHHHHHHHHH
Confidence 9999999974 456889999999999999999999887543221111111110 011111234557899999999
Q ss_pred ccCCCCCCCChHHHHHHhcccc
Q 011092 296 LQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~ 317 (494)
|+.+|.+||++.+++..+..+.
T Consensus 261 l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 261 LQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ccCCcccCcCHHHHHhChhhhc
Confidence 9999999999999998665543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=297.91 Aligned_cols=242 Identities=18% Similarity=0.189 Sum_probs=192.9
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-----ChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
+.+...||.|+||.||++.. .+|..||||.+...... ..+.+.+|+.++.+++||||+++++++.+. ..+++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 34455669999999999995 45899999998643211 134688899999999999999999998764 45789
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||++|++|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 9999999999999863 346889999999999999999999999 99999999999999999999999998875432
Q ss_pred -----CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 212 -----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 212 -----~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||............. ........+...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 236 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA----TQPTNPVLPPHVSD 236 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh----cCCCCCCCchhhCH
Confidence 123457889999999988889999999999999999999998875432111111111 11111223445667
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+++.+||. +|++||++++++.
T Consensus 237 ~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 237 HCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 88999999995 9999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=301.69 Aligned_cols=243 Identities=19% Similarity=0.283 Sum_probs=199.4
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
++.++.||.|++|.||++... +++.|++|.+...... ....+.+|++++++++||||+++++++...+..++|+||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 455667799999999999964 5899999999765432 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCCC--Cccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 216 (494)
+++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||++++++.++|+|||.+...... ....
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (265)
T cd06605 83 GGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV 160 (265)
T ss_pred CCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence 99999998642 2678999999999999999999999 88 999999999999999999999999988654322 2356
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch-----hHHhhhccccccccccccCCCCch-hHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-----LDLIRDRNLQMLTDSCLEGQFTDD-DGTELVR 290 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 290 (494)
++..|+|||.+.+..++.++||||||+++++|++|+.|+.... ........... . ....+.. .+.++.+
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~ 235 (265)
T cd06605 161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE----P-PPRLPSGKFSPDFQD 235 (265)
T ss_pred CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC----C-CCCCChhhcCHHHHH
Confidence 7889999999998889999999999999999999998876431 11111111110 0 1111222 5678999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
+|.+||..+|.+|||+.+++.
T Consensus 236 li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 236 FVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHcCCCchhCcCHHHHhh
Confidence 999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=302.49 Aligned_cols=258 Identities=16% Similarity=0.166 Sum_probs=200.2
Q ss_pred ccCHHHHHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEE
Q 011092 46 EFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLG 123 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~ 123 (494)
.+++.++...+++|. ++..||.|+||.||++.. .+++.+|+|++.... .....+.+|+.++.++ +||||+++++
T Consensus 11 ~~~~~~~~~~~~~y~---~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~ 86 (291)
T cd06639 11 MLGLESLGDPTDTWE---IIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYG 86 (291)
T ss_pred hhhcccCCCCCCCeE---EEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 355566666666665 445569999999999995 568999999986543 2245678899999999 8999999999
Q ss_pred EEecC-----CccceeeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC
Q 011092 124 CCCEG-----DERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196 (494)
Q Consensus 124 ~~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~ 196 (494)
++... +..++||||++|++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~ 165 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEG 165 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCC
Confidence 98754 3579999999999999988531 2457899999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCcccCCCC----CccccCCCcCCCcCCCCC-----CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc
Q 011092 197 NPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 267 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~-----~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~ 267 (494)
.+||+|||++...... ....++..|+|||++... .++.++|||||||++|+|++|+.|+............
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~ 245 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI 245 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHH
Confidence 9999999998754432 234578899999998643 2688999999999999999999887643221111110
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... .......+...+..+.+++.+||+.+|++||++.++++
T Consensus 246 ~~~---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 246 PRN---PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred hcC---CCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000 00011112334567999999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=300.31 Aligned_cols=244 Identities=19% Similarity=0.260 Sum_probs=199.5
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
++....+|.|++|.||++... ++..|++|++..... ..+.+..|+++++.++|+||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 99 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG 99 (286)
T ss_pred chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence 445566699999999999965 588999999976543 466789999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 216 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 216 (494)
++|.+++.... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 100 ~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 177 (286)
T cd06614 100 GSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVV 177 (286)
T ss_pred CcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcccc
Confidence 99999997532 37999999999999999999999999 999999999999999999999999987654332 2345
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
++..|++||.+.+..++.++||||||+++|+|++|..|+................. .....+..++..+.+++.+||
T Consensus 178 ~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l 254 (286)
T cd06614 178 GTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI---PPLKNPEKWSPEFKDFLNKCL 254 (286)
T ss_pred CCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---CCCcchhhCCHHHHHHHHHHh
Confidence 67899999999888899999999999999999999988754322211111101000 011112235678999999999
Q ss_pred cCCCCCCCChHHHHH
Q 011092 297 QYEPRERPNPKSLVT 311 (494)
Q Consensus 297 ~~dp~~Rps~~~vl~ 311 (494)
+.+|..|||+.+++.
T Consensus 255 ~~~p~~Rpt~~~il~ 269 (286)
T cd06614 255 VKDPEKRPSAEELLQ 269 (286)
T ss_pred ccChhhCcCHHHHhh
Confidence 999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-39 Score=307.06 Aligned_cols=245 Identities=19% Similarity=0.259 Sum_probs=198.6
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC--CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..|++++.||+|+.+.||++...+.+.||+|++..... .....|..|+..|.+| .|.+||+|++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 47889999999999999999988888999998865432 2367799999999999 69999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
|=+ .+|..+|.........| .+..+..|++.++.++|..| |||.||||.|+|+- .|.+||+|||+|.......
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred ccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 986 89999998644433444 78889999999999999999 99999999999987 5789999999998766543
Q ss_pred ---ccccCCCcCCCcCCCCC-----------CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCC
Q 011092 214 ---SYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~-----------~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (494)
+..||+.||+||.+... ..+.+|||||||||||+|+.|+.||..- ... ...+..+.++...-+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-~n~--~aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-INQ--IAKLHAITDPNHEIE 593 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-HHH--HHHHHhhcCCCcccc
Confidence 56899999999987532 2678999999999999999999877432 111 223344444433323
Q ss_pred CCchh-HHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 280 FTDDD-GTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 280 ~~~~~-~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+|.-. ..++.++++.||..||++|||..++|+
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 33221 134999999999999999999999987
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=304.36 Aligned_cols=248 Identities=19% Similarity=0.280 Sum_probs=195.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.+++++.||.|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 3556778899999999999965 5899999998653322 245788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
+++++|.++... ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 999999887652 345899999999999999999999999 999999999999999999999999998764332 2
Q ss_pred ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------------cccc
Q 011092 214 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------QMLT 272 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--------------------~~~~ 272 (494)
...++..|+|||++.+. .++.++||||||+++++|++|+.|+............. ....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 23567899999998753 47889999999999999999998775432111000000 0000
Q ss_pred cccc-----cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 DSCL-----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.. .......++..+.+++.+||+.+|.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000 00112245678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=296.42 Aligned_cols=244 Identities=19% Similarity=0.257 Sum_probs=200.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEec--CCccceeee
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAE 136 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~lv~e 136 (494)
+++++.+|.|+||.||++.. .++..||+|.+...... ..+.+..|++++++++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 45677889999999999994 56889999998754332 24568899999999999999999998764 345789999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHH-----hcCCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 137 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCT-----SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 137 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH-----~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
|+++++|.+++... ...++++..++.++.||+.||.||| +.+ ++|+||+|+||+++.++.+||+|||++...
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999998642 2457899999999999999999999 888 999999999999999999999999998866
Q ss_pred CCCC----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 210 RDGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 210 ~~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
.... ...++..|++||.+.+..++.++||||||+++++|++|..|+.......+....... .....+...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 235 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG-----KFRRIPYRYS 235 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC-----CCCCCccccC
Confidence 5432 346788999999999888999999999999999999999888654322222211111 1122344566
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+++.+||+.+|.+||++.+|++
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhh
Confidence 88999999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=298.51 Aligned_cols=240 Identities=18% Similarity=0.232 Sum_probs=190.9
Q ss_pred ccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-----ChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccceee
Q 011092 64 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVA 135 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~lv~ 135 (494)
..+.+|+|+||.||++.. .++..|++|.+...... ....+.+|+.+++.++||||+++++++... ...+++|
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~ 85 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFM 85 (266)
T ss_pred ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEE
Confidence 344559999999999995 46899999998643221 134688899999999999999999998753 5678999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||+++++|.+++.. ...+++...+.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.....
T Consensus 86 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 86 EYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred eCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 99999999999863 356899999999999999999999998 999999999999999999999999998754321
Q ss_pred ----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 213 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
....++..|+|||++.+..++.++||||||+++|+|++|+.||............ .........+...+..+
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 238 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI----ATQPTNPQLPSHISEHA 238 (266)
T ss_pred CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHH----hcCCCCCCCchhcCHHH
Confidence 1235788999999999888999999999999999999999887543211111111 11111223344556778
Q ss_pred HHHHHHHccCCCCCCCChHHHHH
Q 011092 289 VRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..++ .||..+|++||++.+++.
T Consensus 239 ~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 239 RDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHH-HHhcCChhhCcCHHHHhc
Confidence 8888 688899999999999976
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=299.84 Aligned_cols=248 Identities=17% Similarity=0.239 Sum_probs=196.6
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~lv~e~ 137 (494)
++.+++||.|++|.||++.. .+++.||+|.+...... ....+.+|++++++++||||+++++++... +..++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 44566779999999999996 45889999999754332 356789999999999999999999998654 468999999
Q ss_pred CCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--C
Q 011092 138 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 213 (494)
++|++|.+++... ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 9999999887532 2456889999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-----HHhhhccccccccccccCCCC--chhHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNLQMLTDSCLEGQFT--DDDGT 286 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~ 286 (494)
...++..|++||.+.+..++.++||||||+++|+|++|+.|+..... ......... ........... ...++
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-MPNPELKDEPGNGIKWSE 240 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-CCchhhccCCCCCCchHH
Confidence 34568899999999988899999999999999999999988764411 011110000 00111111111 23467
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+++.+||+.+|.+|||+.+++.
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHh
Confidence 8999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-38 Score=302.34 Aligned_cols=250 Identities=19% Similarity=0.287 Sum_probs=193.7
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+..+++++.||.|++|.||+|... +++.||||.+...... ....+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 345677888899999999999954 6899999999754322 23467789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++ ++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~-~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 84 YLD-TDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred cCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 998 5999988642 346899999999999999999999999 999999999999999999999999998654321
Q ss_pred CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchh--HHhh---h-------ccccccc-------
Q 011092 213 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIR---D-------RNLQMLT------- 272 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~--~~~~---~-------~~~~~~~------- 272 (494)
....++..|+|||++.+ ..++.++||||||+++|+|++|..||..... .... . .......
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 12345788999999875 4578899999999999999999988754321 0000 0 0000000
Q ss_pred ------cccccCCCCchhH--HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 ------DSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ------~~~~~~~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
............. ..+.+++.+||+.+|.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 241 YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000001122 67889999999999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=298.87 Aligned_cols=242 Identities=18% Similarity=0.267 Sum_probs=199.3
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+.+++.||.|+||.||+|.. .++..||||.+...... ....|.+|+.++.+++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 44667789999999999985 46889999998654322 24578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
+++|.+++. ...+++..+..++.|++.++.|||+++ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999884 356899999999999999999999999 999999999999999999999999998754432 234
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.++..|++||.+.+...+.++||||||+++|+|++|..|+.............. ......+...+.++.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc-----CCCCCCCcccCHHHHHHHHHH
Confidence 578889999999888889999999999999999999988754322211111100 111123344567899999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011092 296 LQYEPRERPNPKSLVTA 312 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~ 312 (494)
|+.+|..||++.+++..
T Consensus 237 l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 237 LNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCChhhCcCHHHHHhC
Confidence 99999999999999983
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=302.64 Aligned_cols=247 Identities=20% Similarity=0.277 Sum_probs=194.9
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
++.+..||.|++|.||+|.. .+|..||||.+...... ....+..|++++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 35667779999999999995 46899999998754322 2457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
+ ++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 68998886545567899999999999999999999999 999999999999999999999999998754332 22
Q ss_pred cccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc------------------------
Q 011092 215 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------------ 269 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~------------------------ 269 (494)
..++..|+|||++.+.. ++.++||||||+++|+|+||+.||..............
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887644 58899999999999999999988865422111000000
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
....... .......+.++.++|.+||+.||.+|||+.+++.
T Consensus 240 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 240 KWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred cccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000 0011234567899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=299.12 Aligned_cols=243 Identities=19% Similarity=0.309 Sum_probs=196.0
Q ss_pred cccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 65 VSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
...||.|++|.||++. ..++..||+|.+...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~ 84 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW 84 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEec
Confidence 3556999999999999 467899999999653311 135688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~---- 212 (494)
+++++|.+++.. ..++++..+..++.||+.||.|||+++ ++|+||+|+||+++.++ .++|+|||++......
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 161 (268)
T cd06630 85 MAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA 161 (268)
T ss_pred cCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC
Confidence 999999999863 457899999999999999999999999 99999999999998776 5999999998754322
Q ss_pred ----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 213 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
....++..|+|||.+.+..++.++||||||+++++|++|..|+.......... ..............+...+.++
T Consensus 162 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd06630 162 GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLSPGL 240 (268)
T ss_pred CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhCHHH
Confidence 12356789999999988888999999999999999999998875322110000 0001111111223445567889
Q ss_pred HHHHHHHccCCCCCCCChHHHHH
Q 011092 289 VRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+++.+||..+|..|||+.+++.
T Consensus 241 ~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 241 RDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHHHHHcCCCcccCcCHHHHhc
Confidence 99999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=297.29 Aligned_cols=241 Identities=21% Similarity=0.289 Sum_probs=196.6
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccC---CCCCccEEEEEecCCccceeee
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+..+..||.|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++ ||||+++++++..++..++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 34566779999999999995 5689999999875432 33567889999999996 9999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++|++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 83 YAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred cCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 999999999885 347899999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc-hhHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVR 290 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 290 (494)
....++..|+|||.+.++ .++.++||||||+++|+|++|..|+............ .... ....+. ..+.++.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~ 233 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-PKSK----PPRLEDNGYSKLLRE 233 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-ccCC----CCCCCcccCCHHHHH
Confidence 234578899999988754 4688999999999999999999888654322111111 0011 111111 25578999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||+.||.+||++.+++.
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhh
Confidence 999999999999999999987
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-38 Score=299.59 Aligned_cols=244 Identities=18% Similarity=0.273 Sum_probs=191.3
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHH-HhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARS-VGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
++.+++.||.|+||.||++.. .+|..||+|.++.... .....+..|+.+ ++.++||||+++++++..++..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 355667789999999999995 4699999999976432 223456667765 5566999999999999999999999999
Q ss_pred CCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 138 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
++ ++|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 97 7888877542 235689999999999999999999997 7 9999999999999999999999999987654322
Q ss_pred --ccccCCCcCCCcCCCC----CCCCCCCCchhHHHHHHHHHhCCCCCCCch--hHHhhhccccccccccccCCCCchhH
Q 011092 214 --SYSTNLAFTPPEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~----~~~~~~sDv~slG~vl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...++..|+|||.+.+ ..++.++|+||||+++|+|++|+.|+.... ...+... . ............+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~ 234 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV-V----EEPSPQLPAEKFS 234 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH-H----hcCCCCCCccccC
Confidence 2457889999998865 346889999999999999999998875321 1111111 0 0000111112356
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.++.+++.+||..+|.+||++.+++.
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 78999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=299.02 Aligned_cols=237 Identities=19% Similarity=0.279 Sum_probs=193.6
Q ss_pred CCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 68 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 68 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
||.|+||+||++.. .+|+.||+|.+..... .....+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 58999999999984 4689999999865321 2245678899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---CccccCCC
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLA 220 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 220 (494)
.+++.......+++..+..++.|++.||.|||+++ ++|+||+|+||++++++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 99997544457999999999999999999999999 999999999999999999999999988754422 23456789
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
|++||++.+..++.++||||||+++++|++|+.||..... ..+...... .....+...+..+.+++.+||
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l 233 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE------MAVEYPDKFSPEAKDLCEALL 233 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc------ccccCCccCCHHHHHHHHHHc
Confidence 9999999888899999999999999999999988754322 111111111 111234445688999999999
Q ss_pred cCCCCCCC-----ChHHHHH
Q 011092 297 QYEPRERP-----NPKSLVT 311 (494)
Q Consensus 297 ~~dp~~Rp-----s~~~vl~ 311 (494)
+.+|.+|| ++.+++.
T Consensus 234 ~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 234 QKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCChhHccCCCcccHHHHHh
Confidence 99999999 5666664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=321.43 Aligned_cols=246 Identities=17% Similarity=0.209 Sum_probs=185.9
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCC------CCCccEEEEEecC-Cccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN------NRLTNLLGCCCEG-DERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~l~~~~~~~-~~~~ 132 (494)
.+++++.||+|+||+||+|.. .++..||||+++... .....+..|+.++..++| ++|+.+++++..+ ...+
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 456777789999999999995 458899999996432 123455667777777754 4588898988764 4688
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCC---------------
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG--------------- 196 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~--------------- 196 (494)
+|||++ |++|.+++.. ...+++..+..|+.||+.||.|||++ + ||||||||+|||++.++
T Consensus 209 iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 209 IVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 999998 6889888863 45799999999999999999999984 8 99999999999998665
Q ss_pred -CeEEcccCCcccCCC-CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh---cccccc
Q 011092 197 -NPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNLQML 271 (494)
Q Consensus 197 -~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~---~~~~~~ 271 (494)
.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 499999998765432 235678999999999999899999999999999999999999986532111000 000000
Q ss_pred ----------------c------cccccC---------C-C-CchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 ----------------T------DSCLEG---------Q-F-TDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ----------------~------~~~~~~---------~-~-~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. .+.... . . .......+.+||.+||+.||.+|||++++++
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 0 000000 0 0 0001356789999999999999999999997
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=297.70 Aligned_cols=241 Identities=22% Similarity=0.272 Sum_probs=200.4
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+++++.||.|+||.||++... ++..||+|.+..... ...+.+.+|++++++++||||+++++++..++..++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 456677799999999999954 589999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Cc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 214 (494)
++|++|.+++.. ..++++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 999999999963 357999999999999999999999999 999999999999999999999999988765443 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh---HHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+..... ......... .....+...+..+.++
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------ADVLYPATWSTEAIDA 232 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------ccccCcccCcHHHHHH
Confidence 4577899999999888889999999999999999999998865432 211111110 1123344566899999
Q ss_pred HHHHccCCCCCCCCh--HHHHH
Q 011092 292 ASRCLQYEPRERPNP--KSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~--~~vl~ 311 (494)
+.+||+.||.+||++ .++++
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHccCChhHcCCccHHHHhc
Confidence 999999999999999 66553
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=300.81 Aligned_cols=248 Identities=21% Similarity=0.324 Sum_probs=196.6
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.+++++.||.|++|.||+|... ++..|+||+++.... ...+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 3566777899999999999954 588999999875322 2246789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
++++.|..+.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 3456899999999999999999999999 9999999999999999999999999987654332
Q ss_pred -ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-hhh-c------------------ccc--
Q 011092 214 -SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRD-R------------------NLQ-- 269 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~-~~~-~------------------~~~-- 269 (494)
...++..|+|||++.+. .++.++||||||+++|+|++|..|+....... ... . ...
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 78999999999999999999998776432110 000 0 000
Q ss_pred ccccc----cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 MLTDS----CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..... .....++..++.++.+++.+||..+|++|||+++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000 0011123334788999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=300.89 Aligned_cols=253 Identities=21% Similarity=0.224 Sum_probs=196.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-----ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+++++.||.|++|.||+|.. .+|+.|+||.+...... ....+..|++++++++|+||+++++++...+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 34556779999999999995 46899999999765432 1345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 213 (494)
||+ +++|.+++.... ..+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 899999996422 36999999999999999999999999 9999999999999999999999999987654332
Q ss_pred --ccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------------cccc---
Q 011092 214 --SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------MLTD--- 273 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~--------------~~~~--- 273 (494)
...+++.|+|||.+.+ ..++.++||||||+++++|++|..+|.............. ....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 2345678999998865 4578899999999999999999766543221100000000 0000
Q ss_pred -----ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 274 -----SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 274 -----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
...........+..+.+++.+||+.+|++|||+.+++. ..+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~--~~~~~~ 287 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE--HPYFSN 287 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh--CccccC
Confidence 00001112334678999999999999999999999998 444443
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=295.38 Aligned_cols=242 Identities=19% Similarity=0.295 Sum_probs=201.4
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++.+.||.|++|.||++... ++..|+||++..... .....+..|+.++.+++||||+++++++..++..++||||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 455677799999999999965 589999999976543 235679999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCCCC----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 214 (494)
+++|.+++.. ..++++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 159 (264)
T cd06623 83 GGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT 159 (264)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence 9999999963 3679999999999999999999999 98 9999999999999999999999999987654332 3
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch---hHHhhhccccccccccccCCCCch-hHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDD-DGTELVR 290 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 290 (494)
..++..|+|||.+.+..++.++||||||+++|+|+||..|+.... ......... .... ...+.. .+..+.+
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~l~~ 234 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DGPP-PSLPAEEFSPEFRD 234 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cCCC-CCCCcccCCHHHHH
Confidence 456789999999998889999999999999999999998875542 111111111 1111 112233 5688999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||..+|.+|||+.++++
T Consensus 235 li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 235 FISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHHHHccCChhhCCCHHHHHh
Confidence 999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=294.83 Aligned_cols=243 Identities=17% Similarity=0.273 Sum_probs=198.7
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+.+.+|.|+||.||++.. .+|..||+|.+..... ...+.+.+|+.+++.++||||+++++.+...+..++|+||++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (257)
T cd08225 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCD 82 (257)
T ss_pred eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCC
Confidence 3455679999999999995 4588999999865422 235578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCCCC----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDGK----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~~----~ 214 (494)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++ .++|+|||.+....... .
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 161 (257)
T cd08225 83 GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT 161 (257)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccccc
Confidence 999999997544456899999999999999999999999 99999999999999875 46999999887654332 2
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+++.|+|||++.+..++.++||||||+++++|++|..|+................. .......+..+.+++.+
T Consensus 162 ~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~ 236 (257)
T cd08225 162 CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF-----APISPNFSRDLRSLISQ 236 (257)
T ss_pred cCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC-----CCCCCCCCHHHHHHHHH
Confidence 3578899999999888899999999999999999999988765433222211111111 11223455789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||..+|++|||+.+++.
T Consensus 237 ~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 237 LFKVSPRDRPSITSILK 253 (257)
T ss_pred HhccChhhCcCHHHHhh
Confidence 99999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=295.39 Aligned_cols=247 Identities=20% Similarity=0.303 Sum_probs=193.8
Q ss_pred ccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCC------cc
Q 011092 64 IVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ER 131 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~ 131 (494)
+.+.||+|+||.||+|... ++..||||++...... ..+++.+|+++++.++||||+++++++...+ ..
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence 4456799999999999843 3678999999754322 2457889999999999999999999986542 23
Q ss_pred ceeeecCCCCCHHHHhccc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 132 LLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
+++++|+++|+|.+++... ....+++.....++.||+.||+|||+++ ++||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccc
Confidence 6889999999999887421 1235788999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCC
Q 011092 208 NSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 208 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (494)
...... ...+++.|++||.+....++.++||||||+++|+|++ |+.|+................ ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~ 236 (273)
T cd05074 162 KIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-----RLKQ 236 (273)
T ss_pred cccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-----cCCC
Confidence 653221 2234578999999988889999999999999999999 776665433222111111100 0112
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
+...+..+.+++.+||+.+|.+|||+.+++..|+.+
T Consensus 237 ~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 237 PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 234557899999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=299.44 Aligned_cols=239 Identities=19% Similarity=0.269 Sum_probs=195.9
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHH
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~ 144 (494)
..||+|+||.||++.. .++..||||++..........+.+|+.+++.++||||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 4569999999999985 568999999986544344567889999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----CccccCCC
Q 011092 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLA 220 (494)
Q Consensus 145 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 220 (494)
+++. ...+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9874 346899999999999999999999999 999999999999999999999999987654322 23457889
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 300 (494)
|++||.+.+..++.++|+||||+++|+|++|..|+.................. .. ......+..+.+++.+||+.+|
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KL--KNLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-cc--CCcccCCHHHHHHHHHHHhCCc
Confidence 99999998888899999999999999999999887654322111111111110 00 0122345789999999999999
Q ss_pred CCCCChHHHHH
Q 011092 301 RERPNPKSLVT 311 (494)
Q Consensus 301 ~~Rps~~~vl~ 311 (494)
.+||++.+++.
T Consensus 259 ~~R~~~~~ll~ 269 (292)
T cd06657 259 AQRATAAELLK 269 (292)
T ss_pred ccCcCHHHHhc
Confidence 99999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=296.16 Aligned_cols=246 Identities=15% Similarity=0.197 Sum_probs=195.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCC------ccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD------ERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~------~~~ 132 (494)
.+++++.||.|++|.||+|... +++.|++|++..... ....|.+|+.+++++ .||||+++++++.... ..+
T Consensus 7 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred heeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 4556777799999999999964 578999999876542 346789999999999 7999999999997644 489
Q ss_pred eeeecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 133 LVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~ 164 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQLD 164 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceecc
Confidence 9999999999999886433 467899999999999999999999999 9999999999999999999999999987543
Q ss_pred CC----CccccCCCcCCCcCCCC-----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 211 DG----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 211 ~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
.. ....++..|+|||++.. ..++.++||||||+++++|++|..||............... .......+
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~ 241 (275)
T cd06608 165 STLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PPPTLKSP 241 (275)
T ss_pred cchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CCCCCCch
Confidence 32 23457889999998753 23678999999999999999999887543211111111111 01111112
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+..+.+++.+||..||++|||+.+++.
T Consensus 242 ~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 242 ENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 235678999999999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=293.27 Aligned_cols=237 Identities=19% Similarity=0.225 Sum_probs=195.6
Q ss_pred CCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 68 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 68 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
||.|++|.||++... ++..|++|++...... ..+.+.+|+.+++.++||||+++++++..++..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 589999999999954 4899999999754322 246789999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---CccccCCC
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLA 220 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 220 (494)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999963 356899999999999999999999999 999999999999999999999999998765543 23457889
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch--hHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 298 (494)
|++||.+.+..++.++|+||||+++|+|++|..|+.... ......... ........+...+..+.+++.+||+.
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~ 233 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL----KGNGKLEFPNYIDKAAKDLIKQLLRR 233 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh----ccCCCCCCCcccCHHHHHHHHHHccC
Confidence 999999988889999999999999999999998886543 111111111 11111223444468899999999999
Q ss_pred CCCCCCC-----hHHHHH
Q 011092 299 EPRERPN-----PKSLVT 311 (494)
Q Consensus 299 dp~~Rps-----~~~vl~ 311 (494)
+|.+||+ +.++++
T Consensus 234 ~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 234 NPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ChhhCcCCcccCHHHHhc
Confidence 9999999 677765
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=307.42 Aligned_cols=248 Identities=20% Similarity=0.253 Sum_probs=212.9
Q ss_pred cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+.+..+.++..||+|.|+.|.++++ .++..||||.+.+..... ...+.+|++++..+.|||||+++.+......+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 3455677888889999999999994 469999999998765433 4568899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||+.+|.+++++.+ .+...+.....++.|+.+|++|||+++ |+|||||.+||||+.+.++||+|||++..+..
T Consensus 133 V~eya~~ge~~~yl~~--~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVK--HGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEeccCchhHHHHHh--cccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccc
Confidence 9999999999999984 345666888899999999999999999 99999999999999999999999999887654
Q ss_pred -CCccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 -GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 -~~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
..+++|++.|.|||++.+..+ ++.+|+||+|++||-|+.|..||.+.....++...+.... .++..++.+..
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------rIp~~ms~dce 283 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------RIPFYMSCDCE 283 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------cccceeechhH
Confidence 357899999999999998775 6799999999999999999999988766555544333221 23445567899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHh
Q 011092 290 RLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
++|+++|.++|.+|++..++.+.-
T Consensus 284 ~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 284 DLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred HHHHHhhccCccccCCHHHhhhhc
Confidence 999999999999999999998743
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=290.73 Aligned_cols=245 Identities=20% Similarity=0.284 Sum_probs=202.1
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+.+...||.|++|.||++... ++..|++|++..........+.+|+++++.++||||+++++++...+..++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 445677799999999999964 6889999999776544567899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Ccccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 217 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~ 217 (494)
++|.+++... ...+++..+..++.|++.||.+||+.+ ++|+||+|+||++++++.++|+|||.+...... ....+
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 82 GSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 9999998642 257899999999999999999999998 999999999999999999999999998766543 35567
Q ss_pred CCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 011092 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297 (494)
Q Consensus 218 t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (494)
+..|++||.+.+...+.++||||||+++++|++|+.|+................. ... ..+...+..+.+++.+||+
T Consensus 160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~i~~~l~ 236 (253)
T cd05122 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP-PGL--RNPEKWSDEFKDFLKKCLQ 236 (253)
T ss_pred CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC-CCc--CcccccCHHHHHHHHHHcc
Confidence 8899999999888899999999999999999999988765421111111111000 000 0111225789999999999
Q ss_pred CCCCCCCChHHHHH
Q 011092 298 YEPRERPNPKSLVT 311 (494)
Q Consensus 298 ~dp~~Rps~~~vl~ 311 (494)
.||++|||+.+++.
T Consensus 237 ~~p~~R~t~~~~l~ 250 (253)
T cd05122 237 KNPEKRPTAEQLLK 250 (253)
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999986
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=296.11 Aligned_cols=236 Identities=19% Similarity=0.204 Sum_probs=187.7
Q ss_pred CCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhc---cCCCCCccEEEEEecCCccceeeecCCC
Q 011092 68 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQ---LRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 68 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~---l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
||+|+||.||++.. .+++.||+|.+...... ....+.+|..++.. .+||||+.+++++..++..++||||++|
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 69999999999995 45899999998654322 12334555544443 4799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--CccccC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN 218 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~t 218 (494)
++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||++...... ....++
T Consensus 82 ~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 999998863 456999999999999999999999999 999999999999999999999999998654322 234688
Q ss_pred CCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH---HhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 219 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD---LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 219 ~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..|+|||.+.+ ..++.++|||||||++++|++|..||...... .+..... ......+...+.++.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~ 232 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------TVNVELPDSFSPELKSLLEG 232 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh------cCCcCCccccCHHHHHHHHH
Confidence 99999999864 45789999999999999999999988543211 1111110 11122344566889999999
Q ss_pred HccCCCCCCC-----ChHHHHHH
Q 011092 295 CLQYEPRERP-----NPKSLVTA 312 (494)
Q Consensus 295 cl~~dp~~Rp-----s~~~vl~~ 312 (494)
||..||.+|| |+.++++.
T Consensus 233 ~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 233 LLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HhcCCHHHhcCCCCCCHHHHHhC
Confidence 9999999999 59888873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=302.77 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=188.2
Q ss_pred CCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHH
Q 011092 69 GEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145 (494)
Q Consensus 69 G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 145 (494)
|.|+||+||++.. .+|+.||+|.+...... ..+.+.+|+.+++.++||||+++++++..++..++||||+++++|.+
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~ 88 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS 88 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence 4559999999995 46999999998754322 24578899999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----------Cc
Q 011092 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KS 214 (494)
Q Consensus 146 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----------~~ 214 (494)
++.......+++..+..++.|++.||.|||+++ ++||||||+|||++.++.++++||+.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (328)
T cd08226 89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQF 167 (328)
T ss_pred HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccc
Confidence 987544456899999999999999999999999 999999999999999999999999854322110 11
Q ss_pred cccCCCcCCCcCCCCC--CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------------------
Q 011092 215 YSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----------------------- 269 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~----------------------- 269 (494)
..++..|++||++.+. .++.++|||||||++|+|++|+.||..............
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (328)
T cd08226 168 STSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ 247 (328)
T ss_pred ccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccch
Confidence 2245679999999764 478899999999999999999988864321111000000
Q ss_pred ------------------ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ------------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...........+...+..+.+|+.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000000011112345678999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=296.77 Aligned_cols=241 Identities=20% Similarity=0.243 Sum_probs=194.8
Q ss_pred ccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 64 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+..||.|+||.||+|+. .+|..|++|.+....... ...+..|+++++.++||||+++++++...+..++||||++
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 345679999999999995 468999999987543222 3468899999999999999999999999999999999996
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCccccCC
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 219 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 219 (494)
++|.+++.. ...++++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||++..........++.
T Consensus 105 -~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 181 (313)
T cd06633 105 -GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181 (313)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence 678777753 3457899999999999999999999999 9999999999999999999999999987665555677889
Q ss_pred CcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 011092 220 AFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296 (494)
Q Consensus 220 ~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (494)
.|+|||++. ...++.++||||||+++|+|++|..|+................ .........+..+.+++.+||
T Consensus 182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND----SPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----CCCCCccccCHHHHHHHHHHc
Confidence 999999984 3558889999999999999999998876532211111111100 111112234467999999999
Q ss_pred cCCCCCCCChHHHHH
Q 011092 297 QYEPRERPNPKSLVT 311 (494)
Q Consensus 297 ~~dp~~Rps~~~vl~ 311 (494)
+.+|.+||++.+++.
T Consensus 258 ~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 258 QKIPQERPASAELLR 272 (313)
T ss_pred cCChhhCcCHHHHhc
Confidence 999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=296.67 Aligned_cols=247 Identities=21% Similarity=0.271 Sum_probs=194.4
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
++++.||.|++|.||+|.. .+|..||+|++...... ....+..|+++++.++||||+++++++..++..+++|||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 4566779999999999995 46999999998754322 24578899999999999999999999999999999999995
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ...
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 159 (283)
T cd07835 82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE 159 (283)
T ss_pred -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence 79999986533346899999999999999999999998 999999999999999999999999998754322 123
Q ss_pred ccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------ccc-------cc
Q 011092 216 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------QML-------TD 273 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--------------~~~-------~~ 273 (494)
.++..|+|||++.+. .++.++||||||+++|+|++|+.||............. ..+ ..
T Consensus 160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07835 160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239 (283)
T ss_pred ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence 457889999988764 46889999999999999999998875432111000000 000 00
Q ss_pred --ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 --SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 --~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...........+..+.+++.+||+.+|.+|||+++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00001122345578999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=298.42 Aligned_cols=258 Identities=22% Similarity=0.268 Sum_probs=197.6
Q ss_pred cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecC--Ccc
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DER 131 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~ 131 (494)
++.+.+++++.||.|+||.||+|.. .+|..||+|.++...... ...+.+|+.++++++|+||+++++++... +..
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 3456677888889999999999995 458999999997543222 33567899999999999999999998765 458
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 84 FLVMEYCE-QDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEEecCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 99999997 688888864 2367999999999999999999999999 99999999999999999999999999876543
Q ss_pred CC----ccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc--------------
Q 011092 212 GK----SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-------------- 272 (494)
Q Consensus 212 ~~----~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-------------- 272 (494)
.. ...++..|+|||.+.+ ..++.++||||||+++|+|++|..||.................
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 21 2234678999999875 4578999999999999999999988864422211110000000
Q ss_pred ---cccccCC-------CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 273 ---DSCLEGQ-------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 273 ---~~~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
....... .....+..+.++|.+||+.||++|||+.+++. ..+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~--h~~f~~ 295 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE--SSYFKE 295 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc--Chhhcc
Confidence 0000000 00123577899999999999999999999997 444443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=298.59 Aligned_cols=250 Identities=20% Similarity=0.251 Sum_probs=193.8
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..+++++.||.|++|.||+|... +|+.||+|.+..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 45667788899999999999954 689999999865432 224578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEEcccCCcccCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~--- 212 (494)
|++ ++|.+++.......+++..+..++.||+.||+|||+++ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 68888876444445688889999999999999999999 999999999999985 567999999998754322
Q ss_pred -CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------------ccc---
Q 011092 213 -KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LTD--- 273 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~--------------~~~--- 273 (494)
....+++.|+|||++.+. .++.++||||||+++|+|+||..||............... +.+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 233567899999988764 4788999999999999999999887543211110000000 000
Q ss_pred ------ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 ------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...........+..+.+++.+||+.+|++||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000012234577999999999999999999999986
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=309.31 Aligned_cols=238 Identities=17% Similarity=0.227 Sum_probs=194.0
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCC----CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCc--cceeeecC
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE--RLLVAEYM 138 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~--~~lv~e~~ 138 (494)
..||+|+|-+||+|.. .+|..||.-.++.. .....++|..|+.+|+.|+||||+++|.+|.+... +.+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 3459999999999995 45888886555321 22235789999999999999999999999988665 77999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-Ccccccccccceeec-CCCCeEEcccCCcccCCCC--Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~--~~ 214 (494)
..|+|..++.+ -+.++...+..|++||++||.|||++. ||||||||.+||+|+ ..|.|||+|+|||...... ..
T Consensus 126 TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks 203 (632)
T KOG0584|consen 126 TSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS 203 (632)
T ss_pred cCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence 99999999974 456888899999999999999999986 499999999999998 5599999999999876543 45
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-HhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..|||.|||||++. ..|+..+||||||++++||+|+..|+....-. .+.......+.+..+. ..-.+++++||.
T Consensus 204 vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~----kV~dPevr~fIe 278 (632)
T KOG0584|consen 204 VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALS----KVKDPEVREFIE 278 (632)
T ss_pred eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhh----ccCCHHHHHHHH
Confidence 68999999999998 78999999999999999999999998654322 2333333333322222 122378999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||.. ...|||+.++|.
T Consensus 279 kCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 279 KCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHhcC-chhccCHHHHhh
Confidence 99999 999999999996
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=289.66 Aligned_cols=244 Identities=20% Similarity=0.264 Sum_probs=203.9
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+++.||.|++|.||++... ++..|++|++..... .....+.+|+++++.++|||++++++.+..++..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 445667799999999999954 589999999976543 34567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 139 PNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999999997532 467999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...+++.|+|||.+.+..++.++||||||+++++|++|+.|+.......+........ ....+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i 235 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNLV 235 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHHH
Confidence 3457788999999988889999999999999999999998876543332222211111 1123345668899999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||..+|.+|||+.+++.
T Consensus 236 ~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 236 SSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHcCCChhhCcCHHHHhc
Confidence 9999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=295.49 Aligned_cols=248 Identities=20% Similarity=0.232 Sum_probs=191.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+.+++.||+|+||.||+|.. .+|..||+|.+....... ...+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 456677789999999999984 468999999997543322 346789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||+++..... ..
T Consensus 86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 162 (291)
T cd07870 86 H-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS 162 (291)
T ss_pred c-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence 6 677776643 2346788889999999999999999999 999999999999999999999999998754322 23
Q ss_pred cccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhH--Hhhhc--------------------ccccc
Q 011092 215 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDR--------------------NLQML 271 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~--~~~~~--------------------~~~~~ 271 (494)
..+++.|+|||.+.+. .++.++||||||+++|+|++|..||...... .+... .....
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07870 163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242 (291)
T ss_pred ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence 3468899999998754 4788999999999999999999887543211 00000 00000
Q ss_pred ccccccCCC-----CchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 TDSCLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
......... ....+..+.+++.+||..||.+|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000 0012467889999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=320.38 Aligned_cols=250 Identities=16% Similarity=0.189 Sum_probs=182.9
Q ss_pred ccccccccCCCCCCCeEEEEEEcC--CCEEEEEEec--------------C---CCCCChHHHHHHHHHHhccCCCCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFN--------------R---MAWPDPRQFLEEARSVGQLRNNRLTN 120 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~hpnIv~ 120 (494)
..|++++.||+|+||.||++..+. +..+++|.+. . ........+.+|+.++.+++|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 467888899999999999987432 2222222111 0 01112346789999999999999999
Q ss_pred EEEEEecCCccceeeecCCCCCHHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC
Q 011092 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 121 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~ 197 (494)
+++++...+..++|++++. ++|.+++.... ...........|+.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGK 305 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCC
Confidence 9999999999999999996 67777764311 122345667889999999999999999 999999999999999999
Q ss_pred eEEcccCCcccCCCC-----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhc-c
Q 011092 198 PRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDR-N 267 (494)
Q Consensus 198 ~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~-~ 267 (494)
+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..++..... ..+... .
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~ 385 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID 385 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence 999999999765432 235689999999999988899999999999999999999865432110 000000 0
Q ss_pred -c----cccccc-----------c---ccCCC-----CchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 -L----QMLTDS-----------C---LEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 -~----~~~~~~-----------~---~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ..+++. . ..... ....+..+.+++.+||+.||.+|||+.+++.
T Consensus 386 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 386 SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 000000 0 00000 0123456788899999999999999999987
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=284.52 Aligned_cols=251 Identities=16% Similarity=0.249 Sum_probs=193.1
Q ss_pred CccccccccCCCCCCCeEEEEEE-cC----CCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEec-CCc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-EN----QRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDE 130 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~ 130 (494)
...|++++.||+|+||.||+|+- .+ ...+|||.++..... -.....+|+.+++.++||||+.+..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 34678999999999999999973 22 237999999765322 24467899999999999999999999987 778
Q ss_pred cceeeecCCCCCHHHHhccc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC----CCeEEccc
Q 011092 131 RLLVAEYMPNETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTF 203 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~----~~~kl~Df 203 (494)
.++++||.+ -+|..+++.. ..+.++...+..|+.||+.|+.|||++. |+||||||.|||+..+ |++||+||
T Consensus 103 v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 103 VWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999998 7898888743 2457899999999999999999999999 9999999999999876 99999999
Q ss_pred CCcccCCCC-------CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh---------c
Q 011092 204 GLMKNSRDG-------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---------R 266 (494)
Q Consensus 204 gla~~~~~~-------~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~---------~ 266 (494)
|+++.+.+. .....|+.|.|||.+.|.. ||.+.|||+.|||+.||+|-.+.|.+.....-.. +
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r 260 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR 260 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence 999976643 2345689999999998865 8999999999999999999887664431110000 0
Q ss_pred cccccccc---cc----------------cCCCCch------------hHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 267 NLQMLTDS---CL----------------EGQFTDD------------DGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 267 ~~~~~~~~---~~----------------~~~~~~~------------~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+..+..+ .+ ......+ -++...+|+.++|+.||.+|.|+++.++
T Consensus 261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 00000000 00 0000000 1234789999999999999999999987
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=293.55 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=190.0
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccC-CCCCccEEEEEecC--Cccceeeec
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLR-NNRLTNLLGCCCEG--DERLLVAEY 137 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~--~~~~lv~e~ 137 (494)
++++.+|.|+||.||+|.. .++..||+|.++.... .......+|+.++.++. ||||+++++++.++ +..++||||
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 4667889999999999994 4689999999875422 22334567999999994 99999999999987 889999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Cc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 214 (494)
++ ++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++||||+|+||+++. +.+||+|||++...... ..
T Consensus 82 ~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~ 157 (282)
T cd07831 82 MD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE 157 (282)
T ss_pred CC-ccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcCC
Confidence 97 688887754 2356899999999999999999999999 999999999999999 99999999998765432 23
Q ss_pred cccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc-------c---------cccccccc
Q 011092 215 YSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------Q---------MLTDSCLE 277 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~-------~---------~~~~~~~~ 277 (494)
..++..|+|||++.. ..++.++|||||||++|||++|..||............. . ........
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07831 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP 237 (282)
T ss_pred CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence 456889999997654 457889999999999999999998886532211000000 0 00000000
Q ss_pred C-------CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 G-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 ~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ......+..+.+++.+||+.+|.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0 011235688999999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=296.78 Aligned_cols=244 Identities=20% Similarity=0.225 Sum_probs=196.2
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+..++.||.|+||.||+|+. .++..|++|.+...... ....+.+|+++++.++|||++++++++...+..++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 34456779999999999995 45889999998643222 234688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 217 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 217 (494)
+. ++|.+.+.. ...++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........+
T Consensus 97 ~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (308)
T cd06634 97 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG 173 (308)
T ss_pred cC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence 97 688777653 2456899999999999999999999999 99999999999999999999999999887666666778
Q ss_pred CCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 218 NLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 218 t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
+..|+|||.+. ...++.++|||||||++|+|++|..|+............... ..........+..+.++|.+
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~ 249 (308)
T cd06634 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (308)
T ss_pred CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc----CCCCcCcccccHHHHHHHHH
Confidence 89999999874 345788999999999999999999887543221111111110 00111123456789999999
Q ss_pred HccCCCCCCCChHHHHHH
Q 011092 295 CLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~ 312 (494)
||+.+|.+||++.+++..
T Consensus 250 cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 250 CLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HhhCCcccCCCHHHHhhC
Confidence 999999999999999974
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=304.23 Aligned_cols=247 Identities=17% Similarity=0.260 Sum_probs=190.9
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccce
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~l 133 (494)
.+.+++.||.|+||.||+|. ..+|..||||.+..... .....+.+|+.++++++||||+++++++.... ..++
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 45567777999999999999 45689999999965322 23456889999999999999999999876543 4789
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
|+||+. ++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 86 v~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 86 VQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred Eehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 999997 68888774 457999999999999999999999999 999999999999999999999999998764322
Q ss_pred ------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc-----------cccccc-
Q 011092 213 ------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTD- 273 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~-----------~~~~~~- 273 (494)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||............ ...+..
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 12356888999998754 45889999999999999999999888643211100000 000000
Q ss_pred -------c-cccC-----CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 274 -------S-CLEG-----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 274 -------~-~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
. .... ......+..+.+++.+||+.+|.+|||+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0000 0011235679999999999999999999999974
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=292.32 Aligned_cols=238 Identities=23% Similarity=0.264 Sum_probs=194.8
Q ss_pred CCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 68 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 68 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
||.|+||.||++... +|..|++|.+..... ...+.+.+|++++.+++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 489999999975443 2356788999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----------
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------- 212 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------- 212 (494)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999974 247899999999999999999999999 999999999999999999999999988754322
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCch--hHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD--DGTELV 289 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 289 (494)
....++..|++||.+.....+.++||||||+++++|++|..|+................. ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI------EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc------CCCccccCCHHHH
Confidence 123467889999999888889999999999999999999988865443322221111100 11112 367899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhc
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
+++.+||+.+|.+|||+..+.+.|+
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHhc
Confidence 9999999999999999955555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=287.50 Aligned_cols=242 Identities=22% Similarity=0.301 Sum_probs=200.9
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+...||.|++|.||++... ++..|++|.+..... .....+.+|++++.+++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 345667799999999999854 588999999977654 23567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----c
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 214 (494)
++++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 99999999863 367999999999999999999999999 9999999999999999999999999988655432 3
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..++..|++||...+..++.++||||||+++++|++|..|+.............. ......+...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-----DDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-----cCCCCCCCCCCHHHHHHHHH
Confidence 4578899999999877789999999999999999999988754321111111110 11112344566889999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||..+|++|||+.+++.
T Consensus 234 ~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 234 CFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHhCChhhCcCHHHHhc
Confidence 99999999999999975
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=295.82 Aligned_cols=247 Identities=13% Similarity=0.102 Sum_probs=183.0
Q ss_pred cccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCCCCh-----------HHHHHHHHHHhccCCCCCccEEEEE
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPDP-----------RQFLEEARSVGQLRNNRLTNLLGCC 125 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~hpnIv~l~~~~ 125 (494)
.+.+.+.||+|+||.||+|...+ +..+|+|.......... .....+...+..+.|+||+++++++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 56677888999999999999543 45667776433221110 1122344456677999999999987
Q ss_pred ecCC----ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEc
Q 011092 126 CEGD----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201 (494)
Q Consensus 126 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~ 201 (494)
.... ..+++++++. .++.+.+.. ....++..+..|+.|++.||.|||+++ ++||||||+|||++.++.++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 93 SFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred eEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEE
Confidence 6543 3468888875 577776642 234678889999999999999999999 9999999999999999999999
Q ss_pred ccCCcccCCC-----------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh--HHh---hh
Q 011092 202 TFGLMKNSRD-----------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLI---RD 265 (494)
Q Consensus 202 Dfgla~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~--~~~---~~ 265 (494)
|||+++.... .....||+.|+|||++.+..++.++|||||||+++||++|+.||..... ... ..
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~ 248 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC 248 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence 9999875421 1224689999999999988999999999999999999999998865411 111 01
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 266 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.....+.... ......+..+.+++..||+.+|++||++.++++.|.
T Consensus 249 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 249 DFIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111111111 112344688999999999999999999999998763
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=296.86 Aligned_cols=248 Identities=19% Similarity=0.230 Sum_probs=190.6
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCc-----cc
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE-----RL 132 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~-----~~ 132 (494)
+++.+.||.|+||.||+|.. .+++.||||.+...... ....+.+|+.++..+ +||||+++++++...+. .+
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 45566779999999999995 46899999998654322 245788999999999 56999999999987665 79
Q ss_pred eeeecCCCCCHHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEEcccCCccc
Q 011092 133 LVAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKN 208 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 208 (494)
+||||++ ++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||+|+||+++. ++.+||+|||++..
T Consensus 83 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 83 LVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEeeccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeeccccee
Confidence 9999998 48888876422 246899999999999999999999999 999999999999998 89999999999875
Q ss_pred CCCC----CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc-----------
Q 011092 209 SRDG----KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----------- 272 (494)
Q Consensus 209 ~~~~----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~----------- 272 (494)
.... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...............+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 4322 22345788999998865 4478999999999999999999988865322111100000000
Q ss_pred -----------cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 -----------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 -----------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+..........+..+.++|.+||..||.+||++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000111235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=285.49 Aligned_cols=233 Identities=20% Similarity=0.243 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
...++.||+|.||.|-+++ ..+|+.+|+|++++...-. ...-+.|-++|...+||.+..+.-.|...+.+|+||||
T Consensus 170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey 249 (516)
T KOG0690|consen 170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY 249 (516)
T ss_pred hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence 3455666999999999999 6679999999998765433 34567899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----CCC
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGK 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~ 213 (494)
..||.|.-+|. ..+.++++....+...|+.||.|||+++ ||+||||.+|.|+|.+|++||.|||+++..- ...
T Consensus 250 anGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k 326 (516)
T KOG0690|consen 250 ANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK 326 (516)
T ss_pred ccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence 99999998886 3567999999999999999999999998 9999999999999999999999999998532 346
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
+++||+.|+|||++....|+.+.|+|.+|||+|||++|+.||....-+.+-.-.... .-.+|..++++...|+.
T Consensus 327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------d~kFPr~ls~eAktLLs 400 (516)
T KOG0690|consen 327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------DLKFPRTLSPEAKTLLS 400 (516)
T ss_pred cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh------hccCCccCCHHHHHHHH
Confidence 889999999999999999999999999999999999999998754332222111110 12456777889999999
Q ss_pred HHccCCCCCC
Q 011092 294 RCLQYEPRER 303 (494)
Q Consensus 294 ~cl~~dp~~R 303 (494)
.+|.+||.+|
T Consensus 401 GLL~kdP~kR 410 (516)
T KOG0690|consen 401 GLLKKDPKKR 410 (516)
T ss_pred HHhhcChHhh
Confidence 9999999999
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=287.56 Aligned_cols=242 Identities=19% Similarity=0.258 Sum_probs=200.1
Q ss_pred ccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecC--CccceeeecC
Q 011092 64 IVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAEYM 138 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~lv~e~~ 138 (494)
+...||.|++|.||+|... ++..|++|++..... ...+.+.+|+.++++++||||+++++.+... +..++|+||+
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 4455699999999999965 689999999976543 2356789999999999999999999999988 7899999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC------
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 212 (494)
++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 84 ~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 84 SGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99999999974 337999999999999999999999999 999999999999999999999999998765543
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
....++..|++||.+.+...+.++||||||+++++|++|..|+......... .............+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i 237 (260)
T cd06606 161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA---LYKIGSSGEPPEIPEHLSEEAKDFL 237 (260)
T ss_pred cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH---HHhccccCCCcCCCcccCHHHHHHH
Confidence 2345788999999998888999999999999999999999887654311000 0011111112234445578999999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.+|.+||++.+++.
T Consensus 238 ~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 238 RKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHhCcCChhhCCCHHHHhh
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-37 Score=293.52 Aligned_cols=246 Identities=22% Similarity=0.299 Sum_probs=193.8
Q ss_pred cccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccceeeec
Q 011092 63 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAEY 137 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~lv~e~ 137 (494)
++++.||.|++|.||+|... ++..||+|.+.... ......+.+|++++++++||||+++++++... +..++||||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY 81 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence 46677899999999999954 58899999998653 22345788999999999999999999999987 789999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
++ ++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 82 MD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred cc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 97 5898888642 257999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc-----------ccc-------
Q 011092 214 -SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTD------- 273 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~-----------~~~------- 273 (494)
...++..|+|||.+.+. .++.++||||||+++|+|+||+.|+............... ...
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL 238 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence 23457789999987653 5789999999999999999999887544322111100000 000
Q ss_pred ---c----cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 ---S----CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ---~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. .........++..+.+++.+||+.+|.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0 0000011112678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=301.07 Aligned_cols=245 Identities=15% Similarity=0.200 Sum_probs=192.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCC------cc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~ 131 (494)
.+.+++.||.|+||.||+|.. .+|+.||||.+.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 96 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDV 96 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcE
Confidence 456677789999999999994 468999999986432 223456788999999999999999999986442 46
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 97 YLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred EEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 89999996 688887742 2889999999999999999999999 99999999999999999999999999986543
Q ss_pred CC---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------------
Q 011092 212 GK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------- 268 (494)
Q Consensus 212 ~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~-------------------- 268 (494)
.. ...++..|+|||.+.+..++.++|||||||++++|++|+.||.............
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 32 3456889999999998889999999999999999999998886432110000000
Q ss_pred -------------ccccccc----ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 -------------QMLTDSC----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 -------------~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
....... .....+...+..+.+++.+||+.||.+|||+.+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000 000012234667899999999999999999999996
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=296.76 Aligned_cols=243 Identities=19% Similarity=0.255 Sum_probs=203.5
Q ss_pred cCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
+.|..++++ |+|+||.||-++ ..+|+-+|.|++.+.... .....+.|-.||.+++.+.||.+--.|.+.+.+|
T Consensus 185 n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 185 NTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred cceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 557777777 999999999999 456999999998543221 2334678999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
||+..|.||+|.-+|...++..+++.....++.+|+-||++||+.+ ||+|||||+|||||+.|+++|+|+|+|......
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 9999999999999887766678999999999999999999999999 999999999999999999999999999987765
Q ss_pred C---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhc-cccccccccccCCCCchhHHHH
Q 011092 213 K---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 213 ~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 288 (494)
. ...||.+|||||++....|+...|+|||||+||||+.|+.||.......-.+. ....+. ...+++...++++
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~---~~~ey~~kFS~ea 417 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE---DPEEYSDKFSEEA 417 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc---chhhcccccCHHH
Confidence 4 34789999999999999999999999999999999999999865322111100 011111 1234667788999
Q ss_pred HHHHHHHccCCCCCCCCh
Q 011092 289 VRLASRCLQYEPRERPNP 306 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~ 306 (494)
.+|...+|++||.+|...
T Consensus 418 kslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 418 KSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred HHHHHHHHccCHHHhccC
Confidence 999999999999999543
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=288.76 Aligned_cols=242 Identities=19% Similarity=0.215 Sum_probs=194.7
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC-----CCChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
+++.+.||.|+||.||+|.. .++..||+|.+.... ......|.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 44556679999999999994 568999999885321 11245788999999999999999999998764 45789
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+++++|.+++.. ...+++.....++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 84 FVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 9999999999999863 346889999999999999999999999 999999999999999999999999998754321
Q ss_pred ------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 213 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....++..|+|||++.+...+.++||||||+++++|++|+.||.......... ...........+...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~p~~~~~ 236 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF----KIATQPTKPMLPDGVSD 236 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH----HHHcCCCCCCCCcccCH
Confidence 23457889999999988888999999999999999999998875432211111 11111122344666778
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+++.+||. +|..||+..+++.
T Consensus 237 ~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 237 ACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHHHhc-CcccCccHHHHhc
Confidence 99999999999 5799999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=289.48 Aligned_cols=235 Identities=20% Similarity=0.217 Sum_probs=187.4
Q ss_pred CCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHH---HHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 68 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEAR---SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 68 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~---~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
||+|+||.||++.. .+++.||+|.+....... ...+..|.. .++...||||+.+++++...+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 69999999999994 568999999987543221 223444444 34445799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--CCccccC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTN 218 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~~~t 218 (494)
++|.+++. ....+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..... .....++
T Consensus 82 ~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 99999886 3457999999999999999999999999 99999999999999999999999999875432 2245688
Q ss_pred CCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchh---HHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 219 LAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 219 ~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..|+|||++.++ .++.++||||||+++|+|++|+.||..... ........ ......+...+..+.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~s~~~~~li~~ 232 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------TMAVELPDSFSPELRSLLEG 232 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh------ccCCCCCCcCCHHHHHHHHH
Confidence 999999998754 588999999999999999999988865411 11111110 01112334456889999999
Q ss_pred HccCCCCCCC-----ChHHHHH
Q 011092 295 CLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rp-----s~~~vl~ 311 (494)
||..+|.+|| ++.++++
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHh
Confidence 9999999999 8989986
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=296.68 Aligned_cols=239 Identities=21% Similarity=0.248 Sum_probs=186.1
Q ss_pred CCCeEEEEE-EcCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHHHhc
Q 011092 72 APNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF 148 (494)
Q Consensus 72 ~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 148 (494)
++|.||.++ ..+++.||||++.... ....+.+.+|+++++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 445666666 3368999999997642 2345689999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----------Ccccc
Q 011092 149 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KSYST 217 (494)
Q Consensus 149 ~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----------~~~~~ 217 (494)
......+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||.+...... ....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 544556899999999999999999999999 999999999999999999999999987643221 12345
Q ss_pred CCCcCCCcCCCCC--CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh-hhc---cccccc-------------------
Q 011092 218 NLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-RDR---NLQMLT------------------- 272 (494)
Q Consensus 218 t~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~-~~~---~~~~~~------------------- 272 (494)
+..|+|||.+.+. .++.++||||||+++|||++|+.||........ ... ......
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 6789999998753 478899999999999999999988864321110 000 000000
Q ss_pred -c----ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 -D----SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 -~----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ...........+.++.+++.+||..||.+|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0 00001112234578899999999999999999999997
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=298.42 Aligned_cols=248 Identities=17% Similarity=0.240 Sum_probs=190.7
Q ss_pred ccccccCCCCCCCeEEEEEEc---CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
+.+++.||+|++|.||+|... ++..||+|.+.... ......+.+|+.++..++||||+++++++... +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 456677899999999999953 47899999997633 23346788999999999999999999999988 77999
Q ss_pred eeecCCCCCHHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC----CCCeEEcccCCc
Q 011092 134 VAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLM 206 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~----~~~~kl~Dfgla 206 (494)
||||++ ++|.+.+.... ...+++..+..++.||+.||.|||+++ ++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999997 56777664221 236899999999999999999999999 999999999999999 999999999998
Q ss_pred ccCCCC-------CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHH----------hhh---
Q 011092 207 KNSRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------IRD--- 265 (494)
Q Consensus 207 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~----------~~~--- 265 (494)
...... ....++..|+|||++.+. .++.++||||||+++++|++|..|+....... +..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 764332 123567889999988764 47889999999999999999998875432111 000
Q ss_pred ----------------ccccccccccccCCCC-----------chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 266 ----------------RNLQMLTDSCLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 266 ----------------~~~~~~~~~~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...............+ ...+..+.+++.+||+.||++|||+.+++.
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000000000011 034467899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=330.97 Aligned_cols=236 Identities=19% Similarity=0.257 Sum_probs=196.1
Q ss_pred cCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 67 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
.||.|.||.||.|. .++|...|+|.++.... ...+...+|+.++..+.|||+|+++|+-.+.+..+|.||||.||+|
T Consensus 1242 ~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsL 1321 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSL 1321 (1509)
T ss_pred ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcH
Confidence 45999999999999 67799999999865332 2345678999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--------Ccc
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSY 215 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--------~~~ 215 (494)
.+.+.+ ++..++.....+..|++.|+.|||+.| ||||||||.||+|+.+|.+|++|||.|...... ...
T Consensus 1322 a~ll~~--gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~ 1398 (1509)
T KOG4645|consen 1322 ASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSM 1398 (1509)
T ss_pred HHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhh
Confidence 999973 455777777888999999999999999 999999999999999999999999998865443 245
Q ss_pred ccCCCcCCCcCCCCCC---CCCCCCchhHHHHHHHHHhCCCCCCCch--hHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 216 STNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~---~~~~sDv~slG~vl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
.||+.|||||++.+.. ...+.||||||||++||+||+.|+..-. +..+.. +.....+.+|..++.+-.+
T Consensus 1399 ~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~------V~~gh~Pq~P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1399 MGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH------VAAGHKPQIPERLSSEGRD 1472 (1509)
T ss_pred cCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH------HhccCCCCCchhhhHhHHH
Confidence 7899999999998644 4568999999999999999999874321 111111 1111223456678899999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||+.||+.|.++.++++
T Consensus 1473 Fle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HHHHHHhcCchhhhHHHHHHH
Confidence 999999999999999988876
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=257.44 Aligned_cols=247 Identities=20% Similarity=0.283 Sum_probs=198.3
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+...+.||+|.||+||+|+ ..++..||+|.++.+... -....++|+-+|+.++|.|||+++++...+...-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4456678999999999999 566899999999764432 2567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
. .+|..+... -++.++.+....++.|+++||.|+|+.+ ++|||+||.|.||+.+|.+|++|||+++-.... ..
T Consensus 84 d-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 84 D-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred h-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 6 888888754 3567999999999999999999999998 999999999999999999999999999876543 23
Q ss_pred cccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcc--------------ccccccccccC
Q 011092 215 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN--------------LQMLTDSCLEG 278 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~--------------~~~~~~~~~~~ 278 (494)
...|..|.+|.++.+.. |++..|+||.|||+.|+.. |++.|++...+....+. +..+++....+
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 45689999999998866 8999999999999999987 55556665443222111 11222222222
Q ss_pred CCC---------chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 279 QFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 279 ~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.++ +.+...-+++++++|.-+|.+|.++++.++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 222 123345678999999999999999998876
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-37 Score=293.10 Aligned_cols=248 Identities=19% Similarity=0.275 Sum_probs=194.2
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++++.||.|++|.||+|... +|..||||.++..... ....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 456677799999999999964 5899999999765432 34677889999999999999999999999999999999998
Q ss_pred CCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 140 NETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++...... ..
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 82 -KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred -ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 58888876422 246899999999999999999999999 999999999999999999999999998754322 23
Q ss_pred cccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------cccc-cccc----
Q 011092 215 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTD-SCLE---- 277 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-----------~~~~-~~~~---- 277 (494)
..++..|++||++.+. .++.++||||||+++|+|++|+.||.............. .+.. +...
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 3467889999988664 468899999999999999999988764322111100000 0000 0000
Q ss_pred -------CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 -------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 -------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.......+..+.+++.+||+.||.+||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011234567899999999999999999999985
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=298.51 Aligned_cols=245 Identities=21% Similarity=0.298 Sum_probs=189.9
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC--CCCChHHHHHHHHHHhcc-CCCCCccEEEEEecC--Cccceee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM--AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG--DERLLVA 135 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~--~~~~lv~ 135 (494)
+.+.+.||.|+||.||+|... +|..||||++... .......+.+|+.++.++ +||||+++++++... ...++||
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVF 88 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEe
Confidence 445566799999999999954 5889999998542 222345677899999999 999999999998654 3579999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 213 (494)
||++ ++|.+++.. ..+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 89 e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 89 EYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred cccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 9997 699988853 37889999999999999999999999 9999999999999999999999999987543221
Q ss_pred -------ccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc------------------
Q 011092 214 -------SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------ 267 (494)
Q Consensus 214 -------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~------------------ 267 (494)
...++..|+|||.+.+ ...+.++||||||+++|+|+||+.||............
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP 243 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence 2356889999998865 45788999999999999999999887543211100000
Q ss_pred -----cccccc--ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 -----LQMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 -----~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...... ...........+.++.+++.+||+.+|.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 000000 00001111225678999999999999999999999997
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=287.35 Aligned_cols=244 Identities=18% Similarity=0.238 Sum_probs=201.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+++++.+|.|++|.||++.. .++..+++|.+...... ....+.+|+++++.++||||+++++++......++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 45667779999999999984 46889999999764322 2456789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--Cc
Q 011092 139 PNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 214 (494)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 9999999886421 356899999999999999999999999 999999999999999999999999998765443 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..++..|++||.+.+..++.++|+||||+++++|++|+.|+................ ....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-----YPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCchhhCHHHHHHHHH
Confidence 456789999999998889999999999999999999998886544332222111111 112233566789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.+|.+|||+.++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 236 MLQVKPKLRPNCDKILA 252 (256)
T ss_pred HcCCCcccCCCHHHHhc
Confidence 99999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=337.37 Aligned_cols=255 Identities=25% Similarity=0.421 Sum_probs=198.8
Q ss_pred cCHHHHHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEE
Q 011092 47 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 125 (494)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 125 (494)
++..++. ..+...++ ||+|+||.||+|.. .++..||||++..... ....|++++++++|||||+++|+|
T Consensus 683 ~~~~~~~---~~~~~~~~---ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~ 752 (968)
T PLN00113 683 ITINDIL---SSLKEENV---ISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLC 752 (968)
T ss_pred hhHHHHH---hhCCcccE---EccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEE
Confidence 4444443 34555544 49999999999995 5789999999865432 123568899999999999999999
Q ss_pred ecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccccccccceeecCCCCeEEcc
Q 011092 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT---SKGRALYHDLNAYRILFDEDGNPRLST 202 (494)
Q Consensus 126 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~ivH~Dlkp~Nill~~~~~~kl~D 202 (494)
...+..++||||+++|+|.+++. .++|..+.+|+.||+.||+||| +.+ |+||||||+||+++.++..++.
T Consensus 753 ~~~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~- 825 (968)
T PLN00113 753 RSEKGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR- 825 (968)
T ss_pred EcCCCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-
Confidence 99999999999999999999994 3899999999999999999999 556 9999999999999999888875
Q ss_pred cCCcccCCCCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-----HHhh-----hccccccc
Q 011092 203 FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIR-----DRNLQMLT 272 (494)
Q Consensus 203 fgla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-----~~~~-----~~~~~~~~ 272 (494)
||............+|+.|+|||++.+..++.++|||||||++|||+||+.|+..... ..+. ........
T Consensus 826 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (968)
T PLN00113 826 LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWI 905 (968)
T ss_pred eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhee
Confidence 6665544344445678999999999988999999999999999999999998743210 0010 01111122
Q ss_pred cccccC--CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 273 DSCLEG--QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 273 ~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
++.... ..+.....++.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 906 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 906 DPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 222211 1223445678899999999999999999999999988754
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=293.30 Aligned_cols=246 Identities=22% Similarity=0.310 Sum_probs=196.1
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
++++.||.|++|.||++.. .++..+++|.+...... ....+.+|++++++++||||+++++++..++..++||||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 4567789999999999995 46899999998765432 35678899999999999999999999999999999999997
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 215 (494)
++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... ..
T Consensus 82 -~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 82 -TDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred -CCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 5888888642 357999999999999999999999999 9999999999999999999999999887654432 24
Q ss_pred ccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------cccc----------
Q 011092 216 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTD---------- 273 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-----------~~~~---------- 273 (494)
.++..|+|||.+.+. ..+.++||||||+++++|+||+.||+............. ....
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 467789999998876 688999999999999999999988754322111000000 0000
Q ss_pred ---ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 ---SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...........+.++.+++.+||+.||.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000112245678999999999999999999999986
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=276.43 Aligned_cols=236 Identities=19% Similarity=0.215 Sum_probs=194.0
Q ss_pred cCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCCCHH
Q 011092 67 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~ 144 (494)
.||+|+|+.|--++ ..+|..||||++.+.....+.+..+|++++.++ .|+||+.++++|+++..+|||||-|.||+|-
T Consensus 85 ~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplL 164 (463)
T KOG0607|consen 85 LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLL 164 (463)
T ss_pred HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHH
Confidence 45999999999999 788999999999887666688999999999999 6999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC---CCeEEcccCCcccCC-----------
Q 011092 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSR----------- 210 (494)
Q Consensus 145 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~----------- 210 (494)
.+++ ..+-+++.+..++..+|+.||.|||.+| |.||||||+|||..+- .-+|||||.+..-..
T Consensus 165 shI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP 241 (463)
T KOG0607|consen 165 SHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTP 241 (463)
T ss_pred HHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCc
Confidence 9997 4567999999999999999999999999 9999999999999644 348999998865321
Q ss_pred CCCccccCCCcCCCcCCC---C--CCCCCCCCchhHHHHHHHHHhCCCCCCCchh-------------------HHhhhc
Q 011092 211 DGKSYSTNLAFTPPEYLR---T--GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------------------DLIRDR 266 (494)
Q Consensus 211 ~~~~~~~t~~y~aPE~~~---~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~-------------------~~~~~~ 266 (494)
.-.+.+|+..|||||+.. + ..|+.+.|.||||||||-|++|.+||.+.-- +.++++
T Consensus 242 ~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG 321 (463)
T KOG0607|consen 242 ELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG 321 (463)
T ss_pred cccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc
Confidence 112446778999999763 2 2488899999999999999999999965311 111111
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. . ++..-...++.+..+++..+|..|+.+|.++..++.
T Consensus 322 kY-e-----FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 322 KY-E-----FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CC-c-----CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11 1 111222357789999999999999999998888875
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=299.97 Aligned_cols=247 Identities=17% Similarity=0.261 Sum_probs=192.8
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~l 133 (494)
+.+++.||.|+||+||++.. .++..||||.+.... ......+.+|+.+++.++||||+++++++.... ..++
T Consensus 7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 86 (337)
T cd07858 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYI 86 (337)
T ss_pred eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEE
Confidence 45566779999999999994 568999999987532 223456788999999999999999999886542 4799
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+. ++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 87 VYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred EEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 999996 789888863 457999999999999999999999999 999999999999999999999999998865433
Q ss_pred ---CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh-------------------cc--
Q 011092 213 ---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RN-- 267 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~-------------------~~-- 267 (494)
....++..|+|||.+.. ..++.++||||||+++|+|++|+.||.......... ..
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07858 163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR 242 (337)
T ss_pred ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhh
Confidence 23457889999998865 458899999999999999999998885432110000 00
Q ss_pred --ccccccc--cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 268 --LQMLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 268 --~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
....... ..........+.++.+++.+||+.+|.+|||+.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 243 RYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000 00001122456789999999999999999999999974
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=292.03 Aligned_cols=247 Identities=20% Similarity=0.308 Sum_probs=193.0
Q ss_pred CccccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+..+.+++.||.|++|.||+|...+ +..||||.++..... ....+..|+.++.++ .||||+++++++......++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3456677888999999999999654 899999999764322 245677788777777 5999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
||++ ++|.+++.. ....+++..+..++.||+.||.|||+ .+ ++||||+|+||++++++.+||+|||++.......
T Consensus 94 e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 94 ELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 9995 678777654 23579999999999999999999998 47 9999999999999999999999999987654322
Q ss_pred --ccccCCCcCCCcCCCCCC----CCCCCCchhHHHHHHHHHhCCCCCCCchh--HHhhhccccccccccccCCCCchhH
Q 011092 214 --SYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~vl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||..... ..... ...... ... ......+
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~-~~~--~~~~~~~ 246 (296)
T cd06618 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK-ILQEEP-PSL--PPNEGFS 246 (296)
T ss_pred ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHH-HhcCCC-CCC--CCCCCCC
Confidence 234678899999987553 78899999999999999999988854211 11111 011000 000 1111345
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
.++.+++.+||+.||.+||++.+++..
T Consensus 247 ~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 247 PDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 789999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=299.57 Aligned_cols=246 Identities=20% Similarity=0.317 Sum_probs=197.0
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~l 133 (494)
+.+.+.||.|++|.||+|... ++..||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 456677899999999999954 58999999997643 233567899999999999999999999998775 7899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
||||++ ++|.+++.. ..++++..+..++.||+.||.|||+.| ++|+||||+|||++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 82 VTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred Eecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 999997 689888863 347999999999999999999999999 9999999999999999999999999988654432
Q ss_pred -------ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc-------------
Q 011092 214 -------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------- 272 (494)
Q Consensus 214 -------~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~------------- 272 (494)
...++..|+|||.+.+. .++.++|+||||+++++|++|..||.................
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 34567889999999887 789999999999999999999988865432211110000000
Q ss_pred ------c------ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 ------D------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ------~------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ...........+..+.+++.+||+.+|.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0 00000112235678999999999999999999999997
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=291.80 Aligned_cols=245 Identities=18% Similarity=0.254 Sum_probs=193.3
Q ss_pred ccccccCCCCCCCeEEEEEE----cCCCEEEEEEecCCCC----CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 62 ENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
+++.+.||.|+||.||++.. .+|..||+|+++.... ...+.+..|+.++.++ +|+||+.+++++..++..+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 45667789999999999985 3688999999975321 2246688899999999 6999999999999988999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++.. ..++++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999863 456889999999999999999999999 999999999999999999999999998765332
Q ss_pred -----CccccCCCcCCCcCCCCC--CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 213 -----KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
....++..|+|||.+.+. .++.++||||||+++|+|++|..|+...............+... ....+...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--CCCCCccCC
Confidence 134578899999998753 46789999999999999999998875321110000000011000 112344456
Q ss_pred HHHHHHHHHHccCCCCCCC-----ChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
..+.+++.+||+.+|.+|| +..+++.
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 7899999999999999997 6666655
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=298.85 Aligned_cols=246 Identities=17% Similarity=0.269 Sum_probs=191.4
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEec----CCcccee
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 134 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lv 134 (494)
+.+.+.||.|++|.||+|.. .+|..||+|++..... .....+.+|+.++++++||||+++++++.. ....++|
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEE
Confidence 44556679999999999994 5699999999975422 235678889999999999999999998763 3467999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 87 ~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 87 MDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred Eehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99996 789998863 456999999999999999999999999 999999999999999999999999998754321
Q ss_pred ------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh-------------------c
Q 011092 213 ------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------R 266 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~-------------------~ 266 (494)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... .
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 242 (334)
T cd07855 163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD 242 (334)
T ss_pred CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence 12357789999999865 458899999999999999999999886542110000 0
Q ss_pred ccc----ccccc--cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 267 NLQ----MLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 267 ~~~----~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... ..... ..........+..+.+++.+||+.+|.+|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 00000 0000011234678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=289.19 Aligned_cols=247 Identities=21% Similarity=0.260 Sum_probs=192.7
Q ss_pred cccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhcc---CCCCCccEEEEEecCCc-----c
Q 011092 63 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL---RNNRLTNLLGCCCEGDE-----R 131 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~hpnIv~l~~~~~~~~~-----~ 131 (494)
++++.||.|+||.||+|... ++..||+|+++...... ...+.+|+.++.++ .||||+++++++...+. .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 45667799999999999965 48999999997543222 34566788877666 59999999999988776 8
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
+++|||++ ++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 82 TLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred EEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 99999997 58998886544446899999999999999999999999 99999999999999999999999999876543
Q ss_pred CC---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc--------c------cc
Q 011092 212 GK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------T------DS 274 (494)
Q Consensus 212 ~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~--------~------~~ 274 (494)
.. ...++..|+|||.+.+..++.++||||||+++|+|++|..|+................ . ..
T Consensus 160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07838 160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS 239 (287)
T ss_pred CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence 32 2346788999999998889999999999999999999987776543221111000000 0 00
Q ss_pred cc-------cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 CL-------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ~~-------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. ........+..+.+++.+||+.||.+||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 01111234578899999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=292.63 Aligned_cols=250 Identities=20% Similarity=0.248 Sum_probs=189.5
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCc-----
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----- 130 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----- 130 (494)
...+++++.||.|+||.||+|.. .++..||||.+...... ....+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34567778889999999999995 45899999998653322 23456789999999999999999999876543
Q ss_pred ---cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 131 ---RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 131 ---~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
.++||||+. ++|.+.+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 499999996 688887753 2346899999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCC--------ccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh---ccccccccc-
Q 011092 208 NSRDGK--------SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNLQMLTDS- 274 (494)
Q Consensus 208 ~~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~---~~~~~~~~~- 274 (494)
...... ...++..|+|||.+.+.. ++.++||||||+++|+|+||..|+.......... .........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 543221 234578899999887644 6889999999999999999998775432211000 000000000
Q ss_pred -------------cccCC---------CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 -------------CLEGQ---------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 -------------~~~~~---------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..... .+...+..+.++|.+||..||.+|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000 00012356789999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=298.05 Aligned_cols=257 Identities=17% Similarity=0.229 Sum_probs=194.7
Q ss_pred HHHHHHHh-cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEE
Q 011092 49 LEQLKNAT-SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGC 124 (494)
Q Consensus 49 ~~~~~~~~-~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~ 124 (494)
.+++..++ .-...+.++..||.|+||.||+|.. .+|..||||++..... .....+.+|+.+++.++||||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 34444443 2223456677789999999999995 4689999999875321 124568899999999999999999999
Q ss_pred EecCC------ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCe
Q 011092 125 CCEGD------ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 198 (494)
Q Consensus 125 ~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~ 198 (494)
+.... ..++|+||+. .+|..++ ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~ 156 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCEL 156 (342)
T ss_pred ecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCE
Confidence 87543 3589999996 5777665 246899999999999999999999999 9999999999999999999
Q ss_pred EEcccCCcccCCCC-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-------
Q 011092 199 RLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------- 269 (494)
Q Consensus 199 kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~------- 269 (494)
+|+|||+++..... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..............
T Consensus 157 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred EEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999998765432 23456788999999876 4588899999999999999999998865432111000000
Q ss_pred ------------cc---ccccccC---CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ------------ML---TDSCLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ------------~~---~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. ....... ......+..+.+++.+||+.||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0000000 001124567899999999999999999999985
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=292.35 Aligned_cols=245 Identities=19% Similarity=0.267 Sum_probs=196.5
Q ss_pred ccccccCCCCCCCeEEEEEE----cCCCEEEEEEecCCCC----CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 62 ENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
+.+++.||.|++|.||++.. .++..||||.++.... ...+.+..|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 45667789999999999884 2468899999875321 2245688999999999 6999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 99999999999999863 356899999999999999999999999 999999999999999999999999998754332
Q ss_pred C-----ccccCCCcCCCcCCCCCC--CCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccccccccccCCCC
Q 011092 213 K-----SYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 213 ~-----~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 281 (494)
. ...++..|++||.+.+.. .+.++||||||+++++|++|..|+..... ..+....... ....+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~------~~~~~ 232 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS------KPPFP 232 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc------CCCCC
Confidence 1 235788999999987655 78899999999999999999988753211 1111111110 11223
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhcc
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
...+..+.+++.+||+.+|++|||+.++...|..
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 233 KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 3456789999999999999999999888777654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=290.60 Aligned_cols=247 Identities=18% Similarity=0.304 Sum_probs=193.1
Q ss_pred cccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceeeecCC
Q 011092 63 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+++.||.|++|+||+|... +++.|+||++...... ......+|+..+.+++ ||||+++++++..++..++||||+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 80 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM- 80 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence 45567899999999999964 5889999998654321 2334567999999998 999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Cccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 216 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 216 (494)
+++|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV 159 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence 789999887544457899999999999999999999999 999999999999999999999999998765443 2345
Q ss_pred cCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc---------------------ccccccc
Q 011092 217 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------LQMLTDS 274 (494)
Q Consensus 217 ~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~---------------------~~~~~~~ 274 (494)
++..|+|||++.+ ..++.++|+||||+++++|++|+.||+........... .......
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07830 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ 239 (283)
T ss_pred CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence 6889999998854 44789999999999999999999887543221110000 0000000
Q ss_pred cc---cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 CL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. ........+..+.+++.+||+.+|.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00 00011122478999999999999999999999976
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=288.19 Aligned_cols=253 Identities=18% Similarity=0.264 Sum_probs=194.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc--CCCCCccEEEEEecCC----cccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEGD----ERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~hpnIv~l~~~~~~~~----~~~lv 134 (494)
..++++.+|+|.||.||+|.+. ++.||||++.... .+.|..|-+|.+.. +|+||++++++-..+. .++||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3445566699999999999984 4899999997543 56788887776655 8999999999887665 78999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCcccccccccceeecCCCCeEEcccCCc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
++|.+.|+|.++|. ...++|....+|+..+++||+|||+. .+|+|||||+.|||+.+|++.-|+|||+|
T Consensus 287 t~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999994 67899999999999999999999974 13999999999999999999999999999
Q ss_pred ccCCCCC------ccccCCCcCCCcCCCCCC-CC-----CCCCchhHHHHHHHHHhCCCCCC-C------c---------
Q 011092 207 KNSRDGK------SYSTNLAFTPPEYLRTGR-VT-----PESVIYSFGTLLLDLLSGKHIPP-S------H--------- 258 (494)
Q Consensus 207 ~~~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~sDv~slG~vl~elltg~~p~~-~------~--------- 258 (494)
.....+. ...||.+|||||++.+.. +. .+.||||+|.|||||+++..... + .
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 8765432 357899999999998643 22 26899999999999999753221 0 0
Q ss_pred -hhHHhhhccccccccccccCCC-CchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 259 -ALDLIRDRNLQMLTDSCLEGQF-TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 259 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
..+.++.........+.++... .......+.+.+..||+.||+.|.|+.=+.+.+..+....
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 1112222111211122111111 1123467899999999999999999999988887776543
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=290.82 Aligned_cols=242 Identities=21% Similarity=0.256 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~ 135 (494)
++.+.+.||.|++|.||++.. .++..|++|++..... .....+..|+.++.+++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 355667789999999999995 4689999999875322 12456888999999998 999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 213 (494)
||+++++|.+++.. ...+++..++.|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999974 347999999999999999999999999 9999999999999999999999999887543321
Q ss_pred ----------------------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc
Q 011092 214 ----------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 271 (494)
Q Consensus 214 ----------------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 271 (494)
...++..|++||.+....++.++||||||++++++++|..|+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--- 235 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL--- 235 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH---
Confidence 2345788999999988889999999999999999999998876543221111111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHccCCCCCCCCh----HHHHH
Q 011092 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP----KSLVT 311 (494)
Q Consensus 272 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~vl~ 311 (494)
......+...++.+.+++.+||+.+|.+|||+ ++++.
T Consensus 236 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 ---KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 01112344556889999999999999999999 77765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=304.68 Aligned_cols=191 Identities=25% Similarity=0.316 Sum_probs=167.6
Q ss_pred ccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCC------ccceeeec
Q 011092 66 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ERLLVAEY 137 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~~lv~e~ 137 (494)
+.||.|+||.||+|+ ..+|+.||||.++... ....+...+|+++|++++|||||+++++-.+.. ...+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 456999999999999 6679999999997643 344678899999999999999999999866543 46899999
Q ss_pred CCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec--CCCC--eEEcccCCcccCCCC
Q 011092 138 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGN--PRLSTFGLMKNSRDG 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~--~~~~--~kl~Dfgla~~~~~~ 212 (494)
|.||||...+.+.+ ...+++.+.+.++..++.||.|||++| |+||||||.||++- .+|+ .||+|||.|+...+.
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 99999999998644 357999999999999999999999999 99999999999983 4444 799999999988776
Q ss_pred C---ccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCC
Q 011092 213 K---SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPS 257 (494)
Q Consensus 213 ~---~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~ 257 (494)
. +..||..|.+||.+.. ..|+..+|.|||||++|+.+||..||-.
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 4 5689999999999984 7899999999999999999999999844
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=277.04 Aligned_cols=240 Identities=15% Similarity=0.148 Sum_probs=196.5
Q ss_pred ccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecC----CccceeeecCC
Q 011092 66 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG----DERLLVAEYMP 139 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~----~~~~lv~e~~~ 139 (494)
..||-|-.|.|-.+. ..+|..+|+|++... ....+|+++.-.. .|||||.++++|.+. ..+.+|||.++
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 456999999999998 456999999998643 3456888887777 799999999998753 34679999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec---CCCCeEEcccCCcccCCCC---C
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG---K 213 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~---~ 213 (494)
||.|...+..++...+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.. .|-.+||+|||+|+..... .
T Consensus 143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 999999999888889999999999999999999999999 99999999999996 4556999999999976532 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc--cccCCCCchhHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDGTELVRL 291 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l 291 (494)
+.+.|+.|.|||++....|+...|+||+||++|-|++|.+||....-..+..+....+... .++..-...+++...++
T Consensus 222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdl 301 (400)
T KOG0604|consen 222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDL 301 (400)
T ss_pred CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHH
Confidence 5567999999999998899999999999999999999999986543222222221111111 12222234578899999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
|+.+|..+|.+|.|..+++.
T Consensus 302 IR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 302 IRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred HHHHhcCCchhheeHHHhhc
Confidence 99999999999999999987
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=291.58 Aligned_cols=248 Identities=21% Similarity=0.239 Sum_probs=189.9
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCC--------
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-------- 129 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-------- 129 (494)
.+.+.+.+|.|+||.||+|... +|+.||+|.++.... .....+.+|++++++++||||+++++++....
T Consensus 8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~ 87 (302)
T cd07864 8 KFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKD 87 (302)
T ss_pred hhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcccc
Confidence 3445566699999999999964 589999999975432 22456788999999999999999999987654
Q ss_pred --ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 130 --ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 130 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
..++|+||+++ +|...+.. ....+++..+..++.||+.||.|||+.+ |+|+||||+||++++++.+||+|||++.
T Consensus 88 ~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 88 KGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred CCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccc
Confidence 68999999985 77777653 2346899999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCC-----ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh----hhc---c----ccc
Q 011092 208 NSRDGK-----SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI----RDR---N----LQM 270 (494)
Q Consensus 208 ~~~~~~-----~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~----~~~---~----~~~ 270 (494)
...... ...++..|++||.+.+. ..+.++|||||||++++|++|+.||........ ... . ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD 244 (302)
T ss_pred cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence 654322 12346789999988653 468899999999999999999988754321110 000 0 000
Q ss_pred ccccc-------------ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 LTDSC-------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 ~~~~~-------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+.... .........+..+.+++.+||+.+|.+|||+.+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 000011234678999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=279.05 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=193.7
Q ss_pred ccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCC
Q 011092 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
-++.||.|+||+|+|-. .++|+..|||+++.... .+.++|+.|.+...+- +.||||++||.+..++..|+.||.|+
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 35788999999999988 45699999999987664 3467899999877766 78999999999999999999999996
Q ss_pred CCHHHHhcc---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---Cc
Q 011092 141 ETLAKHLFH---WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 214 (494)
Q Consensus 141 gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 214 (494)
.||+.+... -....+++..+-+|..-...||.||-..-+|||||+||+|||++..|.+||||||++....+. ..
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~ 226 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV 226 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence 888765542 234568899899999999999999988656999999999999999999999999998765443 22
Q ss_pred cccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc-c-ccc-cCCCCchhHHHHH
Q 011092 215 YSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-D-SCL-EGQFTDDDGTELV 289 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~l~ 289 (494)
-.|-..|||||.+.. ..|+.+|||||||++|+|+.||+.|+..+.. +.++..+... + +.+ ...-..+.+..+.
T Consensus 227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~ 304 (361)
T KOG1006|consen 227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLFDKECVHYSFSMV 304 (361)
T ss_pred ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecCcccccccCHHHH
Confidence 356788999999864 3488999999999999999999988765422 2221111111 1 111 1111223667899
Q ss_pred HHHHHHccCCCCCCCChHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+|..||.+|-..||.+.++++
T Consensus 305 ~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 305 RFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHhhcccccCcchhhhhc
Confidence 9999999999999999999876
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=296.50 Aligned_cols=246 Identities=17% Similarity=0.221 Sum_probs=190.1
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC-----------
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG----------- 128 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----------- 128 (494)
.+.+++.||.|+||.||+|.. .+|..||+|.+........+.+.+|+++++.++||||+++++++...
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSL 85 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccc
Confidence 456677789999999999995 56899999999766555567789999999999999999999876543
Q ss_pred ---CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEcccC
Q 011092 129 ---DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFG 204 (494)
Q Consensus 129 ---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg 204 (494)
...++||||++ ++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++ +++.++|+|||
T Consensus 86 ~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 86 TELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred cccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCcc
Confidence 34689999997 68988884 356899999999999999999999999 99999999999997 55678999999
Q ss_pred CcccCCCC-------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-------
Q 011092 205 LMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------- 269 (494)
Q Consensus 205 la~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~------- 269 (494)
++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE 240 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 98754321 12346788999998754 4578899999999999999999988854321110000000
Q ss_pred --------cc---------ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 --------ML---------TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 --------~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. .............+.++.+++.+||+.||.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00 0000000011234578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=293.65 Aligned_cols=259 Identities=17% Similarity=0.234 Sum_probs=198.2
Q ss_pred cccCHHHHHHHhcCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccE
Q 011092 45 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNL 121 (494)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l 121 (494)
+.....++...+++|. +++.||+|+||.||++. ..++..||+|++...... ..+.+.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~~~~~~~y~---~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~ 81 (345)
T cd07877 5 RQELNKTIWEVPERYQ---NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 81 (345)
T ss_pred hhhHHHHHhhccCceE---EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccce
Confidence 4455566666776665 55666999999999998 456899999999753221 24568899999999999999999
Q ss_pred EEEEecC------CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 122 LGCCCEG------DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 122 ~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
++++... +..+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~ 156 (345)
T cd07877 82 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNED 156 (345)
T ss_pred eeeeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCC
Confidence 9988643 3467888887 789998884 346999999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc------
Q 011092 196 GNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------ 267 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~------ 267 (494)
+.+||+|||++...... ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||............
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999999998765443 23467889999998865 45788999999999999999999887543211100000
Q ss_pred -----cccccc-----------ccc---cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 -----LQMLTD-----------SCL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 -----~~~~~~-----------~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+.. ... ........+.++.+++.+||+.||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 000000 000 00001123567899999999999999999999986
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=293.86 Aligned_cols=242 Identities=19% Similarity=0.233 Sum_probs=189.4
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--------------hHHHHHHHHHHhccCCCCCccEEEEEecCCc
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--------------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 130 (494)
..||.|+||+||+|.. .+++.||||.++...... ...+.+|+++++.++||||+++++++..++.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 94 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF 94 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence 4579999999999995 468999999986543221 1247799999999999999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++ ++|.+++. ....+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYG 170 (335)
T ss_pred EEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeecc
Confidence 999999997 68999886 3456899999999999999999999999 9999999999999999999999999887544
Q ss_pred CC------------------CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc
Q 011092 211 DG------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 271 (494)
Q Consensus 211 ~~------------------~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 271 (494)
.. ....++..|+|||.+.+.. ++.++||||||+++++|+||+.|+...............+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~ 250 (335)
T PTZ00024 171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELL 250 (335)
T ss_pred cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 10 1223567899999987644 6889999999999999999998876543211110000000
Q ss_pred ---ccc-------------------cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 ---TDS-------------------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ---~~~-------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... ..........+..+.+++.+||+.+|.+|||+.+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 251 GTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 000 0000011234577899999999999999999999997
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=281.40 Aligned_cols=235 Identities=23% Similarity=0.277 Sum_probs=195.1
Q ss_pred CCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 68 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 68 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
||.|+||.||++... ++..|++|.+...... ....+..|+.++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 589999999999954 5899999998765432 245788999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----CccccCC
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNL 219 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 219 (494)
.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999963 346899999999999999999999998 999999999999999999999999998765432 2445788
Q ss_pred CcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCC
Q 011092 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299 (494)
Q Consensus 220 ~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (494)
.|++||.+.+...+.++|+||||+++|+|++|..||.............. .....+...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999888889999999999999999999988865432222111111 111234445688999999999999
Q ss_pred CCCCCCh---HHHHH
Q 011092 300 PRERPNP---KSLVT 311 (494)
Q Consensus 300 p~~Rps~---~~vl~ 311 (494)
|++||++ ++++.
T Consensus 232 p~~R~~~~~~~~l~~ 246 (250)
T cd05123 232 PTKRLGSGGAEEIKA 246 (250)
T ss_pred HhhCCCcccHHHHHh
Confidence 9999999 55543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=291.70 Aligned_cols=245 Identities=18% Similarity=0.275 Sum_probs=191.0
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEec-CCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~e~ 137 (494)
+.++..||.|+||.||++. ..++..||||++.... ....+.+..|++++..++||||+++++++.. ....++||||
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~ 91 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTEL 91 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeeh
Confidence 4456667999999999999 4468999999986432 1234678899999999999999999999876 4578999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Cccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 216 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 216 (494)
+ +++|.+++. ..++++.....++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ....
T Consensus 92 ~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 166 (328)
T cd07856 92 L-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYV 166 (328)
T ss_pred h-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCc
Confidence 9 579998884 456888889999999999999999999 999999999999999999999999998754432 3345
Q ss_pred cCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh---------------hhc----ccc----ccc
Q 011092 217 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---------------RDR----NLQ----MLT 272 (494)
Q Consensus 217 ~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~---------------~~~----~~~----~~~ 272 (494)
++..|+|||.+.+ ..++.++||||||+++++|+||+.||+....... ... ... ...
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (328)
T cd07856 167 STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLP 246 (328)
T ss_pred ccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc
Confidence 6889999998865 4689999999999999999999988864321100 000 000 000
Q ss_pred --cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 --DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 --~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
............+..+.+++.+||+.+|++|||+.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 247 KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000111234578999999999999999999999986
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=290.75 Aligned_cols=250 Identities=20% Similarity=0.262 Sum_probs=189.5
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCC------
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ 129 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 129 (494)
...+.+++.||.|+||.||+|.. .+++.||||.+......+ ...+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 34667778889999999999995 458999999986543222 346788999999999999999999875543
Q ss_pred --ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 130 --ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 130 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
..++||||+. ++|...+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccch
Confidence 3589999997 577777653 2457999999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCC---------------ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc---
Q 011092 208 NSRDGK---------------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--- 268 (494)
Q Consensus 208 ~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--- 268 (494)
...... ...+++.|+|||.+.+. .++.++||||||+++|+|++|++||.............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543221 12346779999988654 47899999999999999999998875432211100000
Q ss_pred --------------cccccccccCCCC-------chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 --------------QMLTDSCLEGQFT-------DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 --------------~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
............+ ......+.+++.+||+.||.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000001 123367889999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=285.05 Aligned_cols=246 Identities=23% Similarity=0.282 Sum_probs=194.8
Q ss_pred cccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 63 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.++..||+|.+|.||+|... +++.|++|.+.... ....+.+..|+.++++++||||+++++++...+..++||||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 34567799999999999954 58999999998653 2235678899999999999999999999999999999999997
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 215 (494)
++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++....... ..
T Consensus 82 -~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 -MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred -cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 6999999642 246999999999999999999999999 9999999999999999999999999987654322 23
Q ss_pred ccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------------cccccc
Q 011092 216 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------QMLTDS 274 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--------------------~~~~~~ 274 (494)
.++..|+|||.+.+. .++.++||||||++++||++|+.||............. ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 446789999998766 78999999999999999999988876543211100000 000000
Q ss_pred ---cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 ---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..........+..+.+++.+||..+|++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000111123578999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=297.15 Aligned_cols=238 Identities=21% Similarity=0.262 Sum_probs=197.0
Q ss_pred CCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.+..+++...+|.|+|++|-++. ..+++..+||++.... ..-.+|+.++... +||||+++.+++.++...|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 35678888899999999999998 5568999999997652 2234677777766 8999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee-cCCCCeEEcccCCcccCCCCC-
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill-~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|++.|+-|.+.+.. .+.....+..|+.+|+.|+.|||++| +|||||||+|||+ ++.++++|+|||.++......
T Consensus 396 e~l~g~ell~ri~~---~~~~~~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS---KPEFCSEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999988887752 23333677789999999999999999 9999999999999 699999999999998776552
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-HhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
+.+-|..|.|||++....+|+++|+||||++||+|++|+.|+....-+ .+... +. .+.+...++....+|+
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~----i~----~~~~s~~vS~~AKdLl 543 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR----IQ----MPKFSECVSDEAKDLL 543 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh----hc----CCccccccCHHHHHHH
Confidence 335688999999999889999999999999999999999988655433 11111 11 1222356778999999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.||.+||++.++..
T Consensus 544 ~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 544 QQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHhccCChhhCcChhhhcc
Confidence 9999999999999999987
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=293.04 Aligned_cols=246 Identities=17% Similarity=0.210 Sum_probs=192.7
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCC------cc
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~ 131 (494)
.+.++..||.|+||.||++. ..++..||||.+...... ....+.+|+.+++.++||||+++++++.... ..
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF 95 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence 46677888999999999998 456899999998653222 2356889999999999999999999987654 34
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 96 ~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 96 YLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred EEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 8999999 789998884 357999999999999999999999999 99999999999999999999999999876543
Q ss_pred C-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------------------
Q 011092 212 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------- 269 (494)
Q Consensus 212 ~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-------------------- 269 (494)
. ....+++.|++||.+.+ ..++.++|+||||+++++|++|..||..............
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07880 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKN 250 (343)
T ss_pred CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence 3 23457889999999875 3578899999999999999999988864321110000000
Q ss_pred ---ccccc--cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ---MLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ---~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+... ..........+..+.+++.+||+.||.+|||+.+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0000112244567899999999999999999999985
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=302.76 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=205.5
Q ss_pred cccccCCCCCCCeEEEEE-EcCC----CEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 63 NIVSEHGEKAPNVVYKGK-LENQ----RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~-~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
...++||.|+||+||+|. ...| -+||||++...... ...+++.|+-+|.+++|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 345778999999999999 4444 47899998765433 3678999999999999999999999998765 899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcc-
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY- 215 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~- 215 (494)
|+|+|+|.++++. .+.++.....+.|..||++||.|||.+. +|||||-..|||+..-..+||.|||+++........
T Consensus 778 ~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred hcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999999976 3457888899999999999999999998 999999999999999999999999999987654322
Q ss_pred -----ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 216 -----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 216 -----~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
...+.|||-|.+....+|.++|||||||++||++| |..|+.+.....+..- .....+-..|+.++-+++
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl-----le~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL-----LEKGERLSQPPICTIDVY 930 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH-----HhccccCCCCCCccHHHH
Confidence 22578999999999999999999999999999998 6677766544443321 111112234666778999
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.++.+||..|+..||+++++...+....+
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 99999999999999999999988765544
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=282.35 Aligned_cols=243 Identities=16% Similarity=0.212 Sum_probs=194.3
Q ss_pred ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC-----CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+.+.+.||+|+||.||++... .+..+++|.++... ......+..|+.+++.++||||+++++++...+..++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 456677899999999999854 35556667665422 112345778999999999999999999999988999999
Q ss_pred ecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 136 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||++++ +.++|+|||++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999988632 3457999999999999999999999999 999999999999975 56999999988765332
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....+++.|++||.+.+..++.++|+||||+++|+|++|..|+.............. ......+...+.++.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-----GPTPSLPETYSRQLN 234 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-----CCCCCCcchhcHHHH
Confidence 234578899999999888889999999999999999999988865433222211111 111123445668899
Q ss_pred HHHHHHccCCCCCCCChHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+++.+||..+|.+||++.++++
T Consensus 235 ~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 235 SIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHhcCChhhCcCHHHHhh
Confidence 9999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=290.91 Aligned_cols=246 Identities=18% Similarity=0.250 Sum_probs=188.0
Q ss_pred ccccccCCCCCCCeEEEEEE-cC--CCEEEEEEecCCCCC--ChHHHHHHHHHHhcc-CCCCCccEEEEEecC----Ccc
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-EN--QRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG----DER 131 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~----~~~ 131 (494)
+.+.+.||.|+||.||++.. .+ +..||+|++...... ..+.+.+|+.++.++ +||||+++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 34566779999999999994 34 789999998653221 245788999999999 599999999976432 346
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++++||+. ++|.+++. ....+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 88999986 78999886 3467999999999999999999999999 99999999999999999999999999875432
Q ss_pred C--------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------cc
Q 011092 212 G--------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------ML 271 (494)
Q Consensus 212 ~--------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-----------~~ 271 (494)
. ....++..|+|||++.+ ..++.++||||||+++++|++|+.||.............. .+
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 22457889999998765 4588999999999999999999988754321110000000 00
Q ss_pred --------------ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 --------------TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 --------------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.............+..+.+++.+||+.||.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000111223578999999999999999999999985
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=312.62 Aligned_cols=247 Identities=19% Similarity=0.270 Sum_probs=183.4
Q ss_pred HHHhcCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecC--
Q 011092 53 KNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-- 128 (494)
Q Consensus 53 ~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-- 128 (494)
.+..+.|.+..++ |+|+||.||+++ .-+|+.||||++.... ...-....+|+.+|.+|+|||||+++..|.+.
T Consensus 475 SRY~~DFEEL~lL---GkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 475 SRYLNDFEELELL---GKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhHhhhhHHHHHh---cCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 3455556555555 999999999999 4579999999997654 12245688999999999999999887432100
Q ss_pred --------------------------------------------------------------------------------
Q 011092 129 -------------------------------------------------------------------------------- 128 (494)
Q Consensus 129 -------------------------------------------------------------------------------- 128 (494)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred -------------------------------------CccceeeecCCCCCHHHHhcccCCCCC-CHHHHHHHHHHHHHH
Q 011092 129 -------------------------------------DERLLVAEYMPNETLAKHLFHWETHPM-KWAMRLRVVLHLAQA 170 (494)
Q Consensus 129 -------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l-~~~~~~~i~~~i~~~ 170 (494)
-.+||-||||+..+|.+++.. +... .....++++.+|+.|
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRDEAWRLFREILEG 709 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhHHHHHHHHHHHHH
Confidence 014788999997777777753 2222 467889999999999
Q ss_pred HHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----------------------CCCccccCCCcCCCcCCC
Q 011092 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----------------------DGKSYSTNLAFTPPEYLR 228 (494)
Q Consensus 171 l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----------------------~~~~~~~t~~y~aPE~~~ 228 (494)
|.|+|+.| ||||||||.||++++++.|||+|||+|.... +.....||..|+|||++.
T Consensus 710 LaYIH~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 710 LAYIHDQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHHHhCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999999 9999999999999999999999999988511 112356889999999997
Q ss_pred CCC---CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccccccc--CCCCchhHHHHHHHHHHHccCCCCCC
Q 011092 229 TGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE--GQFTDDDGTELVRLASRCLQYEPRER 303 (494)
Q Consensus 229 ~~~---~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~R 303 (494)
+.. |+.|+|+||||||++||+. ||....-.. ..+..+.++.++ ..+..+..+.-..+|+++++.||.+|
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa---~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERA---SILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHHHH---HHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccC
Confidence 654 9999999999999999986 443321111 111111111111 12233334566789999999999999
Q ss_pred CChHHHHH
Q 011092 304 PNPKSLVT 311 (494)
Q Consensus 304 ps~~~vl~ 311 (494)
||+.++|.
T Consensus 863 PtA~eLL~ 870 (1351)
T KOG1035|consen 863 PTATELLN 870 (1351)
T ss_pred CCHHHHhh
Confidence 99999986
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=312.06 Aligned_cols=255 Identities=18% Similarity=0.177 Sum_probs=208.2
Q ss_pred HHHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEe
Q 011092 51 QLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCC 126 (494)
Q Consensus 51 ~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 126 (494)
.+....-+-++++++..||+|+||.|..+++ .+++.||+|++++.. ..+...|..|-++|..-..+.|+.++-.|.
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 3444444556778888889999999999995 568999999997632 223556889999999999999999999999
Q ss_pred cCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 127 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
+++++|+||||++||+|-.++.+.. +++++.+..++..|..||.-||+.| +|||||||+|||||.+|++||+|||-+
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhH
Confidence 9999999999999999999997543 7999999999999999999999999 999999999999999999999999976
Q ss_pred ccCCCC-----CccccCCCcCCCcCCC----C-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccc
Q 011092 207 KNSRDG-----KSYSTNLAFTPPEYLR----T-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276 (494)
Q Consensus 207 ~~~~~~-----~~~~~t~~y~aPE~~~----~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
-..... ...+|||-|.+||++. + +.|++.+|+||+||++|||+.|..||..+........+..-...-.+
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~F 302 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSF 302 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCC
Confidence 655432 2457999999999985 2 56899999999999999999999999887665554443332111111
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCC---hHHHHH
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 311 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~vl~ 311 (494)
+. ...++++..+||.+.+. +|..|.. .+++-.
T Consensus 303 P~--~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 303 PD--ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred Cc--ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 11 13477899999999885 6888876 888765
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=276.50 Aligned_cols=218 Identities=20% Similarity=0.230 Sum_probs=178.0
Q ss_pred CCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHHHhcc
Q 011092 71 KAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 149 (494)
Q Consensus 71 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 149 (494)
|.+|.||++.. .+++.||+|.+.... .+.+|...+....||||+++++++...+..++||||++|++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 78999999994 568999999997643 234455556666799999999999999999999999999999999863
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-CccccCCCcCCCcCCC
Q 011092 150 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLR 228 (494)
Q Consensus 150 ~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~ 228 (494)
...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 346899999999999999999999999 999999999999999999999999987654432 2334567899999998
Q ss_pred CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCCh
Q 011092 229 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 306 (494)
Q Consensus 229 ~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 306 (494)
+..++.++||||+|++++||++|..|+...... .. .......+...+..+.+++.+||+.||.+||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG-IN---------THTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-cc---------cccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888999999999999999999998765432111 00 000112344456789999999999999999987
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=294.92 Aligned_cols=247 Identities=19% Similarity=0.268 Sum_probs=193.3
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCCc------
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------ 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~------ 130 (494)
..+.++..||.|++|.||+|... ++..||||++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 34667788899999999999954 58899999986532 1224567889999999999999999988866554
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++|+||+ +++|.+++. ..++++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 95 VYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 89999999 689999885 357999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc--cc-------------
Q 011092 211 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--TD------------- 273 (494)
Q Consensus 211 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~--~~------------- 273 (494)
.. ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||................ ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07851 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESAR 249 (343)
T ss_pred ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHH
Confidence 33 34467888999998865 357889999999999999999998886442211111000000 00
Q ss_pred ----ccc---cC---CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 ----SCL---EG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ----~~~---~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... .. ......+..+.+++.+||+.+|.+|||+.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000 00 001123578999999999999999999999986
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=311.00 Aligned_cols=146 Identities=23% Similarity=0.285 Sum_probs=129.8
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+..+.+++.||.|+||.||+|... +++.||||+++...... ...+..|+.++..++||||+++++++...+..|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 345677888899999999999964 68999999997543222 35788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
|||++|++|.+++.. .+.+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999863 356889999999999999999999999 9999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=285.81 Aligned_cols=238 Identities=20% Similarity=0.254 Sum_probs=196.8
Q ss_pred ccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 66 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
+.||+|.||+||-|+ .++|+.||||++.+-... ...++..|+.||..++||.||.+-..|+..+..++|||-+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 356999999999999 457999999999765433 34678899999999999999999999999999999999996 55
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC---CCeEEcccCCcccCCCC---Cccc
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG---KSYS 216 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~---~~~~ 216 (494)
.-+.+...+.+.+++.....++.||+-||.|||.++ |+|+||||+|||+.+. ..+||||||+|+..+.. .+..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 555555556778999999999999999999999999 9999999999999643 56999999999988754 4678
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch--hHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
||+.|+|||+++...|...-|+||.|||+|--++|..||..+. -+.++.... .. +.....+++.+..+||..
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF--My----Pp~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF--MY----PPNPWSEISPEAIDLINN 801 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc--cc----CCCchhhcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999886542 111211111 11 112234567889999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
+|+..-.+|-|....+.
T Consensus 802 LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 802 LLQVKMRKRYSVDKSLS 818 (888)
T ss_pred HHHHHHHHhcchHhhcc
Confidence 99999999998887764
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=278.79 Aligned_cols=235 Identities=20% Similarity=0.271 Sum_probs=199.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+.+.+..||+|+||.|-+|.. .+...+|||+++++.. .+.+--+.|-++|... +-|.+++++.+|..-+.+|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 455677889999999999984 4478999999987542 2344456677777777 5688999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----C
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----D 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~ 211 (494)
||+.||+|-..++. -+.+.+.....++.+|+-||-|||++| ||+||||.+|||++.+|.+||+|||+++..- .
T Consensus 430 EyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred EEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence 99999999888873 456888889999999999999999999 9999999999999999999999999998532 3
Q ss_pred CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 212 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 212 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
..+++||+.|+|||.+...+|+..+|+|||||+||||+.|.+||.++..+.+-+..... .-.+|..++.+..++
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------nvsyPKslSkEAv~i 580 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------NVSYPKSLSKEAVAI 580 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc------cCcCcccccHHHHHH
Confidence 45789999999999999999999999999999999999999999887665544433222 124677888999999
Q ss_pred HHHHccCCCCCCC
Q 011092 292 ASRCLQYEPRERP 304 (494)
Q Consensus 292 i~~cl~~dp~~Rp 304 (494)
+...|.+.|.+|.
T Consensus 581 ckg~ltK~P~kRL 593 (683)
T KOG0696|consen 581 CKGLLTKHPGKRL 593 (683)
T ss_pred HHHHhhcCCcccc
Confidence 9999999999993
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=305.38 Aligned_cols=246 Identities=21% Similarity=0.311 Sum_probs=199.9
Q ss_pred ccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 66 SEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+|+|.||.|++|... ....||||.++..... +.+.+..|+++|..+ +||||+.++|+|...+..++|+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~ 381 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV 381 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence 36799999999999832 1357999999865433 467899999999999 7999999999999989999999
Q ss_pred ecCCCCCHHHHhcccC------C--------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEc
Q 011092 136 EYMPNETLAKHLFHWE------T--------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~ 201 (494)
||+..|+|.+++++.+ . ..++....+.++.||+.||+||+++. +|||||-..|||+.++..+||+
T Consensus 382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIa 460 (609)
T KOG0200|consen 382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIA 460 (609)
T ss_pred EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEc
Confidence 9999999999997533 0 13888999999999999999999998 9999999999999999999999
Q ss_pred ccCCcccCCCCCcc-----c--cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCC-CCCCCch-hHHhhhccccccc
Q 011092 202 TFGLMKNSRDGKSY-----S--TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHA-LDLIRDRNLQMLT 272 (494)
Q Consensus 202 Dfgla~~~~~~~~~-----~--~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~-~p~~~~~-~~~~~~~~~~~~~ 272 (494)
|||+++.......+ . -...|||||.+....++.+||||||||+|||++|.. .|+++-. ...+.+ ..
T Consensus 461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-----~l 535 (609)
T KOG0200|consen 461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE-----FL 535 (609)
T ss_pred cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-----HH
Confidence 99999965443322 1 235699999999988999999999999999999955 4555411 111111 11
Q ss_pred cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
........|..++.+++++++.||+.+|++||++.++.+.|+...
T Consensus 536 ~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 536 KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 111222345566789999999999999999999999999998853
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=291.55 Aligned_cols=243 Identities=15% Similarity=0.229 Sum_probs=201.1
Q ss_pred cccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEec-----CCccceee
Q 011092 63 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE-----GDERLLVA 135 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~-----~~~~~lv~ 135 (494)
+++..||.|.+|.||+++ .++++.+|||++...... .+++..|.++|+.. .|||++.++|++.. ++.+||||
T Consensus 22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVM 100 (953)
T KOG0587|consen 22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVM 100 (953)
T ss_pred EEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEe
Confidence 455566999999999999 677999999998776533 46778899999998 79999999999864 46799999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 211 (494)
|||.|||..|++..-.+..+.|+.+..|++.++.|+.+||... ++|||||-.|||++.++.+||+|||++.....
T Consensus 101 EfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 101 EFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred eccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeeccccc
Confidence 9999999999998766778999999999999999999999997 99999999999999999999999998875543
Q ss_pred CCccccCCCcCCCcCCCC-----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc-ccccccccccCCCCchhH
Q 011092 212 GKSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 212 ~~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 285 (494)
..+..||+.|||||++.- ..|+.++|+||||++..||..|.+|+...-. -.. +....++.+....|...+
T Consensus 180 RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP----mraLF~IpRNPPPkLkrp~kWs 255 (953)
T KOG0587|consen 180 RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP----MRALFLIPRNPPPKLKRPKKWS 255 (953)
T ss_pred ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch----hhhhccCCCCCCccccchhhHH
Confidence 346789999999999853 2478899999999999999999977532211 111 112222333334466778
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.++.++|..||.+|..+||++.++++
T Consensus 256 ~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 256 KKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred HHHHHHHHHHHhhccccCcchhhhcc
Confidence 99999999999999999999999885
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=271.11 Aligned_cols=250 Identities=18% Similarity=0.246 Sum_probs=194.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc--CCCCCccEEEEEecCC----ccceee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEGD----ERLLVA 135 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~hpnIv~l~~~~~~~~----~~~lv~ 135 (494)
..+++.||+|.||.||+|.+ .|..||||++... +.+.+.+|.+|.+.+ +|+||+.+++.-..++ .+|||+
T Consensus 213 I~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 213 IVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred eEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 45778889999999999998 4689999999654 356788888888776 9999999998876543 479999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-----C--CcccccccccceeecCCCCeEEcccCCccc
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-----G--RALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~--~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
+|.++|||.|+|. ..+++....++++..++.||++||.. | .|.|||||+.|||+.+++..-|+|+|||..
T Consensus 289 dYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 289 DYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred ecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 9999999999995 57899999999999999999999963 2 299999999999999999999999999976
Q ss_pred CCCC--------CccccCCCcCCCcCCCCCC----C-C-CCCCchhHHHHHHHHHhCC----------CCCCCc-----h
Q 011092 209 SRDG--------KSYSTNLAFTPPEYLRTGR----V-T-PESVIYSFGTLLLDLLSGK----------HIPPSH-----A 259 (494)
Q Consensus 209 ~~~~--------~~~~~t~~y~aPE~~~~~~----~-~-~~sDv~slG~vl~elltg~----------~p~~~~-----~ 259 (494)
.... ....||-+|||||++.... + + ..+||||||.|+||++... .||... .
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs 445 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS 445 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence 5432 3467999999999986432 2 2 3689999999999997642 343221 2
Q ss_pred hHHhhhcccccccccccc-CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 260 LDLIRDRNLQMLTDSCLE-GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+.++.-.-.....+..+ .-...+....+.++++.||..+|..|-|+-.+-+.|..+..
T Consensus 446 ~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 446 FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 222222211111112111 12234556788999999999999999999999999988764
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=247.21 Aligned_cols=199 Identities=18% Similarity=0.215 Sum_probs=168.8
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCC-CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
...+.+||+|++|.|-+-+ ..+|...|+|.+..... +..++.++|+++..+. ..|.+|++||........|+.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 3456788999999999888 56799999999976432 2356788999887776 7999999999999999999999999
Q ss_pred CCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc--
Q 011092 139 PNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-- 214 (494)
Q Consensus 139 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-- 214 (494)
. .||+.+..+ ..++.+++..+-+|+..|..||.|||++-.+||||+||+||||+.+|++|+||||++....+.-.
T Consensus 128 ~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 128 D-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred h-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 6 888877653 24577999999999999999999999986699999999999999999999999999887665432
Q ss_pred -cccCCCcCCCcCCCC----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH
Q 011092 215 -YSTNLAFTPPEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 261 (494)
Q Consensus 215 -~~~t~~y~aPE~~~~----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~ 261 (494)
..|--.|||||.+.. ..|+.+|||||||+++.||.+++.|++.+...
T Consensus 207 ~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 207 MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 346678999998854 35889999999999999999999998766544
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=280.05 Aligned_cols=241 Identities=17% Similarity=0.197 Sum_probs=203.2
Q ss_pred CCccccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+++.+++.-||-|+||.|-+....+ ...+|+|.+++...- ..+....|-.+|..++.|.||++|-.|.+....|+
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 34566788889999999999998644 335899999764332 35568889999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
.||-|-||.|+..|+ .++.++..+...++.-+..|++|||++| ||+|||||+|.+++.+|.+||.|||+|+....+.
T Consensus 498 LmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 498 LMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 999999999999998 4567999999999999999999999999 9999999999999999999999999999876653
Q ss_pred ---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 214 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
+++||+.|.|||.+.....+.++|.||||++++||++|.+||.+...-...+..+..+ -.-.+|..++....+
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi----d~i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI----DKIEFPRRITKTATD 650 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh----hhhhcccccchhHHH
Confidence 6899999999999998889999999999999999999999987643322222222221 122355667788999
Q ss_pred HHHHHccCCCCCCCC
Q 011092 291 LASRCLQYEPRERPN 305 (494)
Q Consensus 291 li~~cl~~dp~~Rps 305 (494)
+|+++...+|.+|..
T Consensus 651 Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 651 LIKKLCRDNPTERLG 665 (732)
T ss_pred HHHHHHhcCcHhhhc
Confidence 999999999999954
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=261.48 Aligned_cols=233 Identities=22% Similarity=0.283 Sum_probs=192.7
Q ss_pred CCCeEEEEEEc-CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHHHhcc
Q 011092 72 APNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 149 (494)
Q Consensus 72 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 149 (494)
+||.||+|... +|..|++|++....... .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 47899999965 48999999998765544 67899999999999999999999999998999999999999999999863
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---CccccCCCcCCCcC
Q 011092 150 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEY 226 (494)
Q Consensus 150 ~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~ 226 (494)
...+++..+..++.+++.++.+||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 233899999999999999999999998 999999999999999999999999998866543 34567889999999
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHhCCCCCCC-chhHHhhhccccccccccccCCCCc-hhHHHHHHHHHHHccCCCCCCC
Q 011092 227 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVRLASRCLQYEPRERP 304 (494)
Q Consensus 227 ~~~~~~~~~sDv~slG~vl~elltg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dp~~Rp 304 (494)
+.+..++.++||||||+++++|++|..|+.. .....+....... ........ ..+..+.+++.+||..+|.+||
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKP----KPPFPPPEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc----CCCCccccccCCHHHHHHHHHHccCCchhcc
Confidence 9888889999999999999999999988755 2222221111111 11100011 1557899999999999999999
Q ss_pred ChHHHHH
Q 011092 305 NPKSLVT 311 (494)
Q Consensus 305 s~~~vl~ 311 (494)
++.++++
T Consensus 234 ~~~~~~~ 240 (244)
T smart00220 234 TAEEALQ 240 (244)
T ss_pred CHHHHhh
Confidence 9999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=258.37 Aligned_cols=250 Identities=20% Similarity=0.284 Sum_probs=191.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecC--------
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-------- 128 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-------- 128 (494)
+.++.+..||+|.||.||+|+. .+|+.||+|++-..+ ..-...-++|+.+|..++|+|++.++..|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 4566677889999999999994 458889998874432 12245678999999999999999999888642
Q ss_pred CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 129 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
..+|+||.+|+ .+|..+|.. ....++..++.+++.++..||.|+|... |+|||+||.|+||+.+|.+||+|||+++.
T Consensus 97 ~t~ylVf~~ce-hDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 97 ATFYLVFDFCE-HDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ceeeeeHHHhh-hhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccc
Confidence 24799999997 789998864 2356999999999999999999999998 99999999999999999999999999975
Q ss_pred CCCCC--------ccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhH----Hhhh---ccccccc
Q 011092 209 SRDGK--------SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIRD---RNLQMLT 272 (494)
Q Consensus 209 ~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~----~~~~---~~~~~~~ 272 (494)
+.... ....|..|.+||.+.|.. ++++.|||+.|||+.||+||.+.+.+.... .+.. .......
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 54322 223488999999998755 899999999999999999999777554211 1110 0000000
Q ss_pred cc--------------cccCCC--------CchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 273 DS--------------CLEGQF--------TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 273 ~~--------------~~~~~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
+. ...+.. |-.-..+..+|+.++|..||.+|+++.+++..
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 00 000000 00112478899999999999999999999874
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=267.78 Aligned_cols=247 Identities=21% Similarity=0.293 Sum_probs=193.8
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCC-CCCC------hHHHHHHHHHHhccCCCCCccEEEEEec-CCcc
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM-AWPD------PRQFLEEARSVGQLRNNRLTNLLGCCCE-GDER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~------~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~ 131 (494)
.|-++..||+|+|+.||+|. +...+.||||+-... +|.+ .+...+|.+|.+.|.||.||++|+++.- .+.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 35567788999999999999 556889999987532 3333 3456789999999999999999999975 4568
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-Ccccccccccceeec---CCCCeEEcccCCcc
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD---EDGNPRLSTFGLMK 207 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~---~~~~~kl~Dfgla~ 207 (494)
|-|+|||+|.+|+-+|. ..+-+++.+...|+.||+.||.||.... +|||=||||.||||- ..|.+||.|||+++
T Consensus 544 CTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred eeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 99999999999998886 3467999999999999999999999864 599999999999994 45889999999998
Q ss_pred cCCCC-----------CccccCCCcCCCcCCCCC----CCCCCCCchhHHHHHHHHHhCCCCCCCch-hH-Hhhhccccc
Q 011092 208 NSRDG-----------KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHA-LD-LIRDRNLQM 270 (494)
Q Consensus 208 ~~~~~-----------~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~vl~elltg~~p~~~~~-~~-~~~~~~~~~ 270 (494)
...+. ....||+.|++||.+.-+ ..+.++||||+|||+|..+.|+.||.... .. .+....+..
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk 701 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK 701 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence 76543 234689999999998643 37889999999999999999999996432 11 122222211
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.....++ ..+.++.+...||++||++.-++|....++..
T Consensus 702 AtEVqFP--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 702 ATEVQFP--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ceeccCC--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1111111 12245678999999999999999988877764
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=247.01 Aligned_cols=257 Identities=20% Similarity=0.268 Sum_probs=203.5
Q ss_pred ccCHHHHHHHhcCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEE
Q 011092 46 EFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLG 123 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~ 123 (494)
-++++.....+++-+++++++++|+|.++.||.|. ..++..++||.+++.. .+.+.+|+.+|..|. ||||+.+++
T Consensus 24 YWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~D 100 (338)
T KOG0668|consen 24 YWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLD 100 (338)
T ss_pred hcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhh
Confidence 36777777777888899999999999999999999 5678899999998754 567889999999995 999999999
Q ss_pred EEecC--CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEE
Q 011092 124 CCCEG--DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRL 200 (494)
Q Consensus 124 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl 200 (494)
+..+. ..+.||+||+.+.+...+. ..++.-.+..++.+++.||.|+|+.| |+|||+||.|++||. ...++|
T Consensus 101 iV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrl 174 (338)
T KOG0668|consen 101 IVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRL 174 (338)
T ss_pred hhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeee
Confidence 99875 4578999999988887665 35888889999999999999999999 999999999999994 566999
Q ss_pred cccCCcccCCCCCcc---ccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCch--hH------------H
Q 011092 201 STFGLMKNSRDGKSY---STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHA--LD------------L 262 (494)
Q Consensus 201 ~Dfgla~~~~~~~~~---~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~--~~------------~ 262 (494)
+|+|+|.....+..+ ..+..|-.||.+..- .++..-|+|||||++..|+..+.||.... .+ .
T Consensus 175 IDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~e 254 (338)
T KOG0668|consen 175 IDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDE 254 (338)
T ss_pred eecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHH
Confidence 999999988777654 346678899998754 48889999999999999999999985321 00 0
Q ss_pred hhh--cccccccccc----------------ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 263 IRD--RNLQMLTDSC----------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 263 ~~~--~~~~~~~~~~----------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+.. .....-.++. .......-.++++.+++.++|..|-++|+|+.|.+.
T Consensus 255 l~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 255 LYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 000 0000001110 001111123478999999999999999999999875
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=290.43 Aligned_cols=253 Identities=21% Similarity=0.250 Sum_probs=166.4
Q ss_pred CccccccccCCCCCCCeEEEEEE-cC----CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEE------Eec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-EN----QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGC------CCE 127 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~------~~~ 127 (494)
...+.+.+.||+|+||.||+|.. .+ +..||||++..... .+.+..+ .+....+.+++.+... +..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 44667778889999999999995 45 68999999864331 1111111 1222222333322211 234
Q ss_pred CCccceeeecCCCCCHHHHhcccCC------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccc
Q 011092 128 GDERLLVAEYMPNETLAKHLFHWET------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189 (494)
Q Consensus 128 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~N 189 (494)
+...++||||+++++|.+++..... .......+..|+.||+.||.|||+++ |+||||||+|
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~N 285 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQN 285 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHH
Confidence 5678999999999999998864210 01123345679999999999999999 9999999999
Q ss_pred eeecC-CCCeEEcccCCcccCCCC-----CccccCCCcCCCcCCCCCC----------------------CCCCCCchhH
Q 011092 190 ILFDE-DGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGR----------------------VTPESVIYSF 241 (494)
Q Consensus 190 ill~~-~~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~----------------------~~~~sDv~sl 241 (494)
||++. ++.+||+|||+++..... ....+++.|+|||.+.... ++.++|||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 99985 689999999999754322 3456789999999654222 3346799999
Q ss_pred HHHHHHHHhCCCCCCCchhHHhh---hccc-----cccccccccC------CCCchhHHHHHHHHHHHccCCCCCCCChH
Q 011092 242 GTLLLDLLSGKHIPPSHALDLIR---DRNL-----QMLTDSCLEG------QFTDDDGTELVRLASRCLQYEPRERPNPK 307 (494)
Q Consensus 242 G~vl~elltg~~p~~~~~~~~~~---~~~~-----~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 307 (494)
||+||||+++..++......... .... .......... ...........+|+.+||+.||.+|||+.
T Consensus 366 GviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~ 445 (566)
T PLN03225 366 GLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK 445 (566)
T ss_pred HHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence 99999999986554332211110 0000 0000000000 00111123456899999999999999999
Q ss_pred HHHHHhccccc
Q 011092 308 SLVTALSPLQK 318 (494)
Q Consensus 308 ~vl~~L~~~~~ 318 (494)
++++ +++..
T Consensus 446 e~L~--Hpff~ 454 (566)
T PLN03225 446 AALA--HPYFD 454 (566)
T ss_pred HHhC--CcCcC
Confidence 9998 45443
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=263.40 Aligned_cols=248 Identities=16% Similarity=0.177 Sum_probs=194.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC--CCC----CccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--NNR----LTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpn----Iv~l~~~~~~~~~~~l 133 (494)
.+.+++.+|+|.||.|-.+.. ..+..||||+++.... -.+.-+-|+++|.++. .|+ +|.+.++|...++.||
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi 168 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI 168 (415)
T ss_pred ceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence 567778889999999999994 4578999999975431 2445667999999993 233 7888899999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-------------------
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE------------------- 194 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~------------------- 194 (494)
|+|.+ |.|+.+++...+-.+++...+..++.|++.+++|||+.+ ++|-||||+|||+.+
T Consensus 169 vfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 169 VFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred EEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 99999 689999998766678999999999999999999999998 999999999999832
Q ss_pred -CCCeEEcccCCcccCCCC-CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH---hhhcccc
Q 011092 195 -DGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQ 269 (494)
Q Consensus 195 -~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~---~~~~~~~ 269 (494)
+..++|+|||-|...... .+...|..|.|||++.+-..+..+||||+||||+|+.||...|..+.... +.+....
T Consensus 247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG 326 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG 326 (415)
T ss_pred CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC
Confidence 234799999998765443 45677999999999999999999999999999999999998775432100 0000000
Q ss_pred cc---------------------------------cccccc----CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ML---------------------------------TDSCLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ~~---------------------------------~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+ .+++.+ ....+....++.+|+.+||..||.+|+|+.|++.
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 00 000000 0112234567999999999999999999999986
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=272.18 Aligned_cols=248 Identities=18% Similarity=0.220 Sum_probs=193.1
Q ss_pred CHHHHHHHhcCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEE
Q 011092 48 TLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLG 123 (494)
Q Consensus 48 ~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~ 123 (494)
.+-.++++.-.-+-...|+-||-|+||.|-++. .++...||+|.+++...- .......|.+||...+.+.||+||-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 334455555555556778889999999999998 566788999999764321 2345678999999999999999999
Q ss_pred EEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEccc
Q 011092 124 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203 (494)
Q Consensus 124 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 203 (494)
.|.+.+.+|+||+|++||++-.+|.+ .+.|.+.....++.++..|+++.|..| +|||||||+|||||.+|.+||.||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeec
Confidence 99999999999999999999999873 467889999999999999999999999 999999999999999999999999
Q ss_pred CCcccCC---------CC-------------------------------------CccccCCCcCCCcCCCCCCCCCCCC
Q 011092 204 GLMKNSR---------DG-------------------------------------KSYSTNLAFTPPEYLRTGRVTPESV 237 (494)
Q Consensus 204 gla~~~~---------~~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sD 237 (494)
||+.-+. .+ -...||+.|+|||++....++..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9976211 00 0135789999999999889999999
Q ss_pred chhHHHHHHHHHhCCCCCCCchhHHhhhcc--ccccccccccCCCCchhHHHHHHHHHHHccCCCCCC
Q 011092 238 IYSFGTLLLDLLSGKHIPPSHALDLIRDRN--LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303 (494)
Q Consensus 238 v~slG~vl~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 303 (494)
+||.|||||||+.|+.||............ +....+- .+..+++.+..++|.+++. +++.|
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~----~~~~~ls~e~~~li~kLc~-sad~R 916 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHI----PYQGNLSKEALDLIQKLCC-SADSR 916 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccc----ccccccCHHHHHHHHHHhc-Chhhh
Confidence 999999999999999998654332222211 1111111 1233455677777766543 45566
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=252.71 Aligned_cols=244 Identities=18% Similarity=0.281 Sum_probs=188.3
Q ss_pred ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccceeeec
Q 011092 66 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLLVAEY 137 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~lv~e~ 137 (494)
+-||.|+||+||.... ++|+.||+|++.... ....+++.+|+.+|..++|.|++..++...-.. .+|+++|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 5669999999999994 569999999985432 223578999999999999999999988765432 46899999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc---
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 214 (494)
+. .+|..++. ...+++.+.+.-+++||++||.|||+.+ |+||||||.|.|+++|..+||||||+++.......
T Consensus 139 mQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM 214 (449)
T KOG0664|consen 139 MQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM 214 (449)
T ss_pred HH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence 96 88988887 5678999999999999999999999999 99999999999999999999999999997654433
Q ss_pred --cccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchh----HH------------hh---hc-ccccc
Q 011092 215 --YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHAL----DL------------IR---DR-NLQML 271 (494)
Q Consensus 215 --~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~----~~------------~~---~~-~~~~~ 271 (494)
...|-.|.|||.+.|.+ |+.+.||||.|||+.||+..+..|..... +. ++ ++ ....+
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L 294 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL 294 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence 24567899999999865 89999999999999999988866643210 00 00 00 00000
Q ss_pred c----ccccc----CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHh
Q 011092 272 T----DSCLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 272 ~----~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
. .+... -..+..-..+...++.+++..||..|.+..+.+..+
T Consensus 295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0 00000 011123345677899999999999999999888654
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=274.54 Aligned_cols=250 Identities=17% Similarity=0.192 Sum_probs=175.2
Q ss_pred cccccccCCCCCCCeEEEEEE-----------------cCCCEEEEEEecCCCCCChHH--------------HHHHHHH
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-----------------ENQRRIAVKRFNRMAWPDPRQ--------------FLEEARS 109 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~~~ 109 (494)
.+.+.+.||+|+||+||+|.. ..++.||||++........+. +..|+.+
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~ 225 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM 225 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence 445566669999999999963 235689999997543222223 3457777
Q ss_pred HhccCCCCC-----ccEEEEEec--------CCccceeeecCCCCCHHHHhcccC----------------------CCC
Q 011092 110 VGQLRNNRL-----TNLLGCCCE--------GDERLLVAEYMPNETLAKHLFHWE----------------------THP 154 (494)
Q Consensus 110 l~~l~hpnI-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~ 154 (494)
+.+++|.++ ++++++|.. .+..||||||+++++|.+++.... ...
T Consensus 226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 778876654 677777753 346799999999999999886321 113
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----ccccCCCcCCCcCCCC
Q 011092 155 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 229 (494)
Q Consensus 155 l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~y~aPE~~~~ 229 (494)
+++..+..|+.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++....... ...+++.|+|||.+..
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~ 384 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM 384 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence 467788899999999999999999 9999999999999999999999999987543321 1234789999998754
Q ss_pred CCC----------------------CCCCCchhHHHHHHHHHhCCC-CCCCch-h-HHhhh--cc---ccccccccccCC
Q 011092 230 GRV----------------------TPESVIYSFGTLLLDLLSGKH-IPPSHA-L-DLIRD--RN---LQMLTDSCLEGQ 279 (494)
Q Consensus 230 ~~~----------------------~~~sDv~slG~vl~elltg~~-p~~~~~-~-~~~~~--~~---~~~~~~~~~~~~ 279 (494)
... ..+.||||+||++++|++|.. |+.... . ..... .. ..........-.
T Consensus 385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~ 464 (507)
T PLN03224 385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS 464 (507)
T ss_pred CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc
Confidence 321 124799999999999999975 332110 0 00000 00 000000111111
Q ss_pred CCchhHHHHHHHHHHHccCCC---CCCCChHHHHH
Q 011092 280 FTDDDGTELVRLASRCLQYEP---RERPNPKSLVT 311 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp---~~Rps~~~vl~ 311 (494)
.....++...+|+.+||..+| .+|+|+.++++
T Consensus 465 ~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 465 LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 223456789999999999876 68999999987
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=255.25 Aligned_cols=241 Identities=17% Similarity=0.255 Sum_probs=195.0
Q ss_pred CccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
..+..++..||+|+|..|..+. .++.+.+|+|++++.- ..+..-...|-.+..+. +||.+|-++.+|..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 3456778888999999999999 5568999999997643 23345566777777777 79999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC---
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--- 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 210 (494)
|.||++||+|--+++ ..+.++++....+...|+.||.|||+.| ||+||||.+|||+|..|.+||.|+|+++..-
T Consensus 329 vieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence 999999999965554 4567999999999999999999999999 9999999999999999999999999987532
Q ss_pred -CCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh----hhccccccccccccCCCCchhH
Q 011092 211 -DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI----RDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 211 -~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...+++||+.|.|||.+++..|+...|+|+|||+++||+.|+.||.--..+.. .....+.+... .-.+|..++
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprsls 483 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRSLS 483 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--cccccceee
Confidence 34678999999999999999999999999999999999999999853211100 00011111111 113455666
Q ss_pred HHHHHHHHHHccCCCCCCC
Q 011092 286 TELVRLASRCLQYEPRERP 304 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rp 304 (494)
.....+++.-|.+||.+|.
T Consensus 484 vkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 484 VKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhhHHHHHHhhcCCcHHhc
Confidence 7788999999999999993
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-33 Score=271.00 Aligned_cols=250 Identities=18% Similarity=0.213 Sum_probs=205.9
Q ss_pred cCCccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+.-++++++.++|+|+||.|||++ ..++...|+|+++.....+..-..+|+-+++.++|||||.++|.+...+..|+.|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 334578899999999999999999 5679999999999877777778889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----C
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----D 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~ 211 (494)
|||.||+|++..+ ..+++++.++..+.+..+.||+|||+.| =+|||||-.|||+++.|.+|+.|||.+..+. .
T Consensus 92 EycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 92 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred EecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhh
Confidence 9999999999886 6789999999999999999999999999 8999999999999999999999999876544 3
Q ss_pred CCccccCCCcCCCcCC---CCCCCCCCCCchhHHHHHHHHHhCCCCCCCc-hhHHhhhccccccccccccCCCCchhHHH
Q 011092 212 GKSYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 212 ~~~~~~t~~y~aPE~~---~~~~~~~~sDv~slG~vl~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
...+.||+.|||||+. ..+.|...+|||++|+...|+-.-.+|.... ......-........+.+ .-+....+.
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l--kDk~kws~~ 246 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL--KDKTKWSEF 246 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc--cCCccchHH
Confidence 4678999999999986 3456899999999999999997776553221 111111001111111111 112345578
Q ss_pred HHHHHHHHccCCCCCCCChHHHHH
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+|++.||.++|++|||++.++.
T Consensus 247 fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhhee
Confidence 999999999999999999998875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-32 Score=274.68 Aligned_cols=239 Identities=22% Similarity=0.233 Sum_probs=181.0
Q ss_pred CccccccccCCCCCCC-eEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPN-VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
|+..+++ |.|+.| .||+|.. .|+.||||++-... .....+|+..|+.- .|||||++++.-.+....||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4555555 666664 5899998 56899999986543 34567999999999 79999999999999999999999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---C--CCeEEcccCCcccC
Q 011092 137 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---D--GNPRLSTFGLMKNS 209 (494)
Q Consensus 137 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~--~~~kl~Dfgla~~~ 209 (494)
.|. .+|.+++... ..........+.++.|++.||++||+.+ ||||||||.||||+. + .+++|+|||+++..
T Consensus 584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 996 9999999642 1011111345678899999999999998 999999999999975 3 46999999999876
Q ss_pred CCC-------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhC-CCCCCCchhHHhhhccccccccccccCCCC
Q 011092 210 RDG-------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 210 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
..+ ....||.+|+|||++.....+.++||||+|||+|+.++| .+||...... +..+..- ..++..-.+
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R---~~NIl~~-~~~L~~L~~ 737 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER---QANILTG-NYTLVHLEP 737 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh---hhhhhcC-ccceeeecc
Confidence 543 245689999999999988888899999999999999998 5666443211 1110000 000000011
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. ..+..+||.+|+.++|..||++.+|+.
T Consensus 738 ~~-d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 738 LP-DCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred Cc-hHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 11 118899999999999999999999985
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=233.45 Aligned_cols=206 Identities=28% Similarity=0.419 Sum_probs=182.5
Q ss_pred CCCCCCCeEEEEEEcC-CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHH
Q 011092 68 HGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145 (494)
Q Consensus 68 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 145 (494)
||.|++|.||++...+ +..+++|++...... ....+.+|++.++.++|++|+++++++......+++|||++|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 5899999999999654 899999999865532 24679999999999999999999999999889999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEEcccCCcccCCCC----CccccCCC
Q 011092 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLA 220 (494)
Q Consensus 146 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~----~~~~~t~~ 220 (494)
++.... ..+++..+..++.+++.++.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 986321 46899999999999999999999999 999999999999998 899999999998765543 33456789
Q ss_pred cCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCC
Q 011092 221 FTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299 (494)
Q Consensus 221 y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (494)
|++||.+... ..+.++|+|++|+++++| ..+.+++..|++.+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999877 788999999999999999 46889999999999
Q ss_pred CCCCCChHHHHHH
Q 011092 300 PRERPNPKSLVTA 312 (494)
Q Consensus 300 p~~Rps~~~vl~~ 312 (494)
|.+||++.++++.
T Consensus 202 p~~R~~~~~l~~~ 214 (215)
T cd00180 202 PEKRPSAKEILEH 214 (215)
T ss_pred cccCcCHHHHhhC
Confidence 9999999999874
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=235.82 Aligned_cols=243 Identities=17% Similarity=0.221 Sum_probs=186.9
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC--CCCChHHHHHHHHHHhccCCCCCccEEEEEecCC------ccc
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ERL 132 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~~ 132 (494)
+.-+..+|.|+- .|--+.. -.+++||+|++... .....++..+|..++..+.|+||++++.++.-.. ..|
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y 97 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY 97 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence 444566688887 4444442 24889999998542 2334567889999999999999999999997543 479
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+|||++. .+|...+. -.++-.+...|+.|++.|++|||+.| |+||||||+||++..++.+||.|||+++.....
T Consensus 98 ~v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 98 LVMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred HHHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcc
Confidence 9999996 89988885 34677888999999999999999999 999999999999999999999999999865543
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-Hhh------------------h-----
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIR------------------D----- 265 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~~------------------~----- 265 (494)
..+..|..|.|||++.+..+.+.+||||+||++.||++|+..|++...- .+. .
T Consensus 172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y 251 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY 251 (369)
T ss_pred cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence 3456788999999999888999999999999999999999877654110 000 0
Q ss_pred ---------cc-ccccccccccCC--CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 266 ---------RN-LQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 266 ---------~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.. ...+++..++.. .+.--+..+.+++.+||..+|++|.|++++|.
T Consensus 252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00 001111111111 11123467889999999999999999999997
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=253.87 Aligned_cols=200 Identities=16% Similarity=0.216 Sum_probs=172.7
Q ss_pred HHhcCCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC-----CC---ChHHHHHHHHHHhccC---CCCCccE
Q 011092 54 NATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-----WP---DPRQFLEEARSVGQLR---NNRLTNL 121 (494)
Q Consensus 54 ~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~---~~~~~~~E~~~l~~l~---hpnIv~l 121 (494)
...++|+++..++.+|.|+||.|++|.++ +...|+||.+.+.. |- +.-..-.|++||..++ |+||+++
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 34578999999999999999999999954 57889999986532 11 1223457999999996 9999999
Q ss_pred EEEEecCCccceeeecC-CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEE
Q 011092 122 LGCCCEGDERLLVAEYM-PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 200 (494)
Q Consensus 122 ~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 200 (494)
+++|++++.+||+||-. +|.+|.+++. -...+++.+...|+.||+.|+++||+.| |||||||-+||.++.+|.+||
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEE
Confidence 99999999999999965 4678999996 3456999999999999999999999999 999999999999999999999
Q ss_pred cccCCcccCCCC--CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCC
Q 011092 201 STFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPP 256 (494)
Q Consensus 201 ~Dfgla~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~ 256 (494)
+|||-+.....+ ..+.||..|.|||++.|.+| +..-|||++|++||.++....|+.
T Consensus 712 idfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999988765543 57899999999999999886 567899999999999998887764
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-30 Score=248.79 Aligned_cols=195 Identities=18% Similarity=0.180 Sum_probs=167.3
Q ss_pred cccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccC------CCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLR------NNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~l~~~~~~~~~~~l 133 (494)
.|++.+..|.|-|++|.+|.... |..||||+|...... .+.=++|+++|++|. .-|+++|+..|...+++||
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl 511 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL 511 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence 57788889999999999999544 789999999764321 334468999999994 3479999999999999999
Q ss_pred eeecCCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~ 211 (494)
|+|-+. .+|.++|.+.+. -.|....+..++.|+.-||..|-..| |+|.||||+|||+++. ..+||||||-|.....
T Consensus 512 VFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 512 VFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred Eehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCcccccccc
Confidence 999995 899999986543 45788899999999999999999999 9999999999999965 5689999998876654
Q ss_pred C--CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc
Q 011092 212 G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 258 (494)
Q Consensus 212 ~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~ 258 (494)
. ..+..+..|.|||.+.|-+|+...|+||+||+||||.||+..|++.
T Consensus 590 neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 590 NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 3 3455678999999999999999999999999999999999888765
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=227.61 Aligned_cols=191 Identities=25% Similarity=0.304 Sum_probs=168.6
Q ss_pred ccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 64 IVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
+...||.|++|.||++.... +..+++|.+...... ..+.+.+|++.+..++|+|++++++++...+..++++||++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence 34567999999999999654 899999999876544 5678899999999999999999999999988999999999999
Q ss_pred CHHHHhcccCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Ccc
Q 011092 142 TLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSY 215 (494)
Q Consensus 142 sL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 215 (494)
+|.+++... .. +++..+..++.+++.++.+||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 83 ~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 83 DLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 999998642 23 889999999999999999999998 999999999999999999999999998876544 345
Q ss_pred ccCCCcCCCcCC-CCCCCCCCCCchhHHHHHHHHHhCCCCCCC
Q 011092 216 STNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIPPS 257 (494)
Q Consensus 216 ~~t~~y~aPE~~-~~~~~~~~sDv~slG~vl~elltg~~p~~~ 257 (494)
.++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 677889999998 666678899999999999999999998865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-30 Score=238.84 Aligned_cols=243 Identities=23% Similarity=0.326 Sum_probs=190.3
Q ss_pred cccccccCCCCCCCeEEEEEE-c---CCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-E---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.+.++..||.|+|++||++.. . .++.||+|.+...+ ...+...|+++|..+ .+.||+.+.+++..++...+|+
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 356677889999999999993 2 46799999998765 356789999999999 7999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEcccCCcccCC----
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSR---- 210 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~---- 210 (494)
||+++.+..++.. .++...+..+++.++.||.++|.+| ||||||||+|+|.+ .-+.-.|.|||+|....
T Consensus 115 p~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 115 PYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 9999999988884 3778889999999999999999999 99999999999998 55778999999986100
Q ss_pred -------------C--C-----------------------------CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHH
Q 011092 211 -------------D--G-----------------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLL 245 (494)
Q Consensus 211 -------------~--~-----------------------------~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl 245 (494)
. + ....||++|.|||++...+ .++++||||.|||+
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0 0124789999999997654 78999999999999
Q ss_pred HHHHhCCCCCCCchhH--------------Hhh-----hcc------------------cccc-cccccc--------CC
Q 011092 246 LDLLSGKHIPPSHALD--------------LIR-----DRN------------------LQML-TDSCLE--------GQ 279 (494)
Q Consensus 246 ~elltg~~p~~~~~~~--------------~~~-----~~~------------------~~~~-~~~~~~--------~~ 279 (494)
+.+++++.||.....+ .++ .+. ...+ ...+.. ..
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 9999999998432100 000 000 0000 001111 01
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.....+..+.+++.+||+.||.+|.|+++.|+
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 11223458999999999999999999999987
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-30 Score=235.23 Aligned_cols=243 Identities=20% Similarity=0.237 Sum_probs=194.4
Q ss_pred ccccCCCCCCCeEEEEEEcC------CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecC-Cccceee
Q 011092 64 IVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLLVA 135 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-~~~~lv~ 135 (494)
+...+-+|.||.||+|.+.+ .+.|-+|.++....+ ....|+.|.-.+..+.|||+..+.+++.+. ...++++
T Consensus 288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y 367 (563)
T KOG1024|consen 288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY 367 (563)
T ss_pred chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence 34445799999999997542 346778888765433 256789999999999999999999998764 5688999
Q ss_pred ecCCCCCHHHHhccc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 136 EYMPNETLAKHLFHW------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 136 e~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
.+..-|+|..++... ..+.++..+...++.|++.||+|||+.+ +||.||-..|.+||+..++||+|-.+++..
T Consensus 368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDL 446 (563)
T KOG1024|consen 368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDL 446 (563)
T ss_pred eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhcccc
Confidence 999889999999721 2345777788899999999999999999 999999999999999999999999998865
Q ss_pred CCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCC----chhHHhhhccccccccccccC
Q 011092 210 RDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPS----HALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 210 ~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~----~~~~~~~~~~~~~~~~~~~~~ 278 (494)
-... ....+..||+||.+....|+.++|||||||++|||+| |+.|+-. +....++.+.. -
T Consensus 447 FP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR---------l 517 (563)
T KOG1024|consen 447 FPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR---------L 517 (563)
T ss_pred CcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce---------e
Confidence 4432 2234678999999999999999999999999999999 4545422 22222222221 1
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
..|.++|.++..++..||...|++||+++++..-|...
T Consensus 518 aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 518 AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 23567789999999999999999999999999888655
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=234.52 Aligned_cols=131 Identities=17% Similarity=0.184 Sum_probs=112.5
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-----CC---CCccEEEEEec----
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----NN---RLTNLLGCCCE---- 127 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----hp---nIv~l~~~~~~---- 127 (494)
.|.++++||.|-|++||+|. ..+.+.||+|+.+... .-.+.-+.||.+|++++ |+ +||+|++.|..
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 68899999999999999999 5668899999987532 12345678999999993 33 59999999975
Q ss_pred CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec
Q 011092 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193 (494)
Q Consensus 128 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~ 193 (494)
+.+.|+|+|++ |.+|-.+|....-+.++...+.+|+.||+.||.|||.+..|||-||||+|||+.
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 45789999999 789999998777788999999999999999999999975599999999999984
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=222.83 Aligned_cols=243 Identities=21% Similarity=0.228 Sum_probs=182.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEE-EecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGC-CCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~-~~~~~~~~lv~e~ 137 (494)
.+++.+.+|+|-||.+-++.++ +.+.+++|-+.... ...++|.+|..---.| .|.||+.-|++ |...+.+++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 5667788899999999999964 57899999986543 2468899998876667 68999987765 5566778899999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec--CCCCeEEcccCCcccCCCCCcc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGKSY 215 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~~~ 215 (494)
+|.|+|.+-+ ....+.+....+++.|+++||.|+|+++ +||||||.+||||- +..++||||||+.+..+.....
T Consensus 104 aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred Cccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 9999999888 4566888999999999999999999999 99999999999993 4457999999998766544332
Q ss_pred -ccCCCcCCCcCCCCC-----CCCCCCCchhHHHHHHHHHhCCCCCCCchhH---HhhhccccccccccccCCCCchhHH
Q 011092 216 -STNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALD---LIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 216 -~~t~~y~aPE~~~~~-----~~~~~sDv~slG~vl~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
..+..|.+||..... ...+.+|||.||++++.++||+.|+...... .+..........+..+. .....++
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~-~F~~fs~ 258 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK-KFNPFSE 258 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch-hhcccCH
Confidence 335779999976432 2578899999999999999999887422111 01111111111111111 1224567
Q ss_pred HHHHHHHHHccCCCCCCCChHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSL 309 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~v 309 (494)
.+..+.++-|..+|++|--..++
T Consensus 259 ~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 259 KALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred HHHHHHHHhcCCcccccchhHHH
Confidence 88899999999999999333333
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=263.73 Aligned_cols=190 Identities=15% Similarity=0.173 Sum_probs=139.9
Q ss_pred ccCC-CCCccEEEEE-------ecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 011092 112 QLRN-NRLTNLLGCC-------CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183 (494)
Q Consensus 112 ~l~h-pnIv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~ 183 (494)
.++| +||++++++| .....++++|||+ +++|.+++.. ...++++..++.|+.||+.||.|||++| |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4455 5888888887 2334578889988 5799999964 2456999999999999999999999999 9999
Q ss_pred cccccceeecC-------------------CCCeEEcccCCcccCCCC--------------------CccccCCCcCCC
Q 011092 184 DLNAYRILFDE-------------------DGNPRLSTFGLMKNSRDG--------------------KSYSTNLAFTPP 224 (494)
Q Consensus 184 Dlkp~Nill~~-------------------~~~~kl~Dfgla~~~~~~--------------------~~~~~t~~y~aP 224 (494)
||||+||||+. ++.+|++|||+++..... ....+|+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 455677777776532110 013467889999
Q ss_pred cCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCC
Q 011092 225 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304 (494)
Q Consensus 225 E~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 304 (494)
|++.+..++.++|||||||+||||++|..|+..... .+.... .....+. .. ........++.+||+++|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~~~-~~~~~~~----~~-~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSSLR-HRVLPPQ----IL-LNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHHHH-HhhcChh----hh-hcCHHHHHHHHHhCCCChhhCc
Confidence 999999999999999999999999998866543211 111000 0111110 01 1123467889999999999999
Q ss_pred ChHHHHH
Q 011092 305 NPKSLVT 311 (494)
Q Consensus 305 s~~~vl~ 311 (494)
++.++++
T Consensus 258 s~~eil~ 264 (793)
T PLN00181 258 SMSELLQ 264 (793)
T ss_pred ChHHHhh
Confidence 9999987
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-28 Score=214.03 Aligned_cols=254 Identities=19% Similarity=0.265 Sum_probs=201.2
Q ss_pred CCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.|+..+++-+|.....|..|+|+++.+ .+++|++..... ...+.|..|.-.|+-+.||||..++|.|....++.++.
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 355677778888889999999998654 566677764332 23567999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccc-cccccceeecCCCCeEEcccCCcccCCCCCc
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 214 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~-Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 214 (494)
.|+|.|||...++...+-.++-.+..+++.+|++|++|||+..+++-| -|.+..|+||++.+++|+ .+-++..-....
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence 999999999999865555577788999999999999999998777776 899999999999998875 233333333344
Q ss_pred cccCCCcCCCcCCCCCCC---CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRV---TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~---~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
...++.||+||.++..+- -.++|+|||.+++|||.|...||.....-...- .+.-..+...+|+..+..+..|
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm----kialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM----KIALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh----hhhhccccccCCCCccHHHHHH
Confidence 456799999999987653 357999999999999999998885432211111 1111223445677888899999
Q ss_pred HHHHccCCCCCCCChHHHHHHhcccc
Q 011092 292 ASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
+.-|+..||.+||.+..++-.|+.++
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999999888753
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=206.50 Aligned_cols=166 Identities=18% Similarity=0.158 Sum_probs=126.4
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCccccCCC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 220 (494)
|||.+++.. .+.++++..++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||++....... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 789999964 2457999999999999999999999986 999999999999999 99987654433 367899
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-HHhhhcccccccccccc-CCCCchhHH--HHHHHHHHHc
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLE-GQFTDDDGT--ELVRLASRCL 296 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~cl 296 (494)
|||||++.+..++.++|||||||++|||+||+.||..... ................. ...+..... .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999988754311 00111111111110000 011222333 6999999999
Q ss_pred cCCCCCCCChHHHHHHhcccc
Q 011092 297 QYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 297 ~~dp~~Rps~~~vl~~L~~~~ 317 (494)
..+|.+||++.++++.+....
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hcccccccCHHHHHHHHHHHH
Confidence 999999999999999876543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=199.70 Aligned_cols=254 Identities=15% Similarity=0.154 Sum_probs=202.2
Q ss_pred cccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCC-CCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+.+++.||+|+||.+|.|. ..+|..||||+-.... ...++..|..+.+.|+| ..|+.+..+..+...-.+||+.+
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred ceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence 57899999999999999999 7789999999976544 24578889999999965 78999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec---CCCCeEEcccCCcccCCC----
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~---- 211 (494)
|.||.+++.- ..+.++..+++-++-|++.-++|+|.++ +|||||||+|+|.. ....+.|+|||+++...+
T Consensus 94 -GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 94 -GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred -CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 8999998864 3567999999999999999999999999 99999999999986 345689999999986543
Q ss_pred -------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc---ccccccccccCCCC
Q 011092 212 -------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQMLTDSCLEGQFT 281 (494)
Q Consensus 212 -------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 281 (494)
.....||..|.+--...+...+.+.|+-|+|.+|..+..|..|+.+-... .+.+. +.+..-..+.....
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~-tk~QKyEkI~EkK~s~~ie~LC 249 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA-TKKQKYEKISEKKMSTPIEVLC 249 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh-hHHHHHHHHHHhhcCCCHHHHh
Confidence 23467889999877777777888999999999999999999887653221 11111 11111111222334
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
...|.++.-.+..|-..--++-|...-+.+.+.-+....
T Consensus 250 ~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 250 KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 456788999999999999999999888877776655443
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=214.57 Aligned_cols=252 Identities=17% Similarity=0.174 Sum_probs=197.5
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCEEEEEEecCCCCCChHHHHHHHHHHhccCC----CCCccEEEEE-ecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN----NRLTNLLGCC-CEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----pnIv~l~~~~-~~~~~~~l 133 (494)
.+.+.+.||+|+||.||++.... ...+|+|............+..|+.++..+.+ +++..+++.+ ..+...|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 67788889999999999999544 35789998876543333378889999999963 6899999999 47778899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-----CCeEEcccCCcc-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-----GNPRLSTFGLMK- 207 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-----~~~kl~Dfgla~- 207 (494)
||+.+ |.+|.++......+.++..+...|+.|++.+|.+||+.| ++||||||+|+++... ..+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99999 899999886545578999999999999999999999999 9999999999999854 469999999998
Q ss_pred -cCC---------C---CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccc
Q 011092 208 -NSR---------D---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQM 270 (494)
Q Consensus 208 -~~~---------~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~ 270 (494)
... . ...+.||..|+++....+...+.+.|+||++.++.+++.|..|+..... ..........
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~ 256 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL 256 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh
Confidence 311 0 1134589999999999999999999999999999999999877643221 1111111111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.... .....+.++..+...+-..+...+|....+...|......
T Consensus 257 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 257 LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1110 2233456788888888889999999999999998776554
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-25 Score=201.48 Aligned_cols=252 Identities=17% Similarity=0.190 Sum_probs=200.4
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++-++||.|+||+++.|+ +-++..||||.-...+ ...++..|....+.| ..++|..++-+...+.+..||+|.+
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 4566788999999999999 6689999999865433 345677888888888 6799999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-----CCeEEcccCCcccCCCC--
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-----GNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-----~~~kl~Dfgla~~~~~~-- 212 (494)
|.||+|++. +.++.|+..++..|+.|++.-++|+|++. +|.|||||+|+||..- ..+.++|||+|+.+.+.
T Consensus 107 GPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 107 GPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred CcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 899999774 46788999999999999999999999998 9999999999999643 34899999999976543
Q ss_pred ---------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh--ccccccccccccCCCC
Q 011092 213 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQFT 281 (494)
Q Consensus 213 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 281 (494)
.+..||.+||+--...|...+.+.|+-|||-|+.+.+.|..|+.+-..+..++ ..+.............
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLC 264 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHH
Confidence 35678999999999999999999999999999999999998886543222111 1111111111112233
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
...|.++...+...-..+-.+-|..+-+...+..+..
T Consensus 265 ~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 265 EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 4567889999999999999999998877766655544
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-25 Score=212.49 Aligned_cols=155 Identities=16% Similarity=0.058 Sum_probs=120.4
Q ss_pred ccccccCCCCCCCeEEEEEEc--CCCEEEEEEecCCCC---C--ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMAW---P--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~---~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
|.+.+.||+|+||+||+|.+. +++.||||++..... . ....|.+|+++|.+++|+||+..+..+ +..++|
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~~~~LV 96 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---GKDGLV 96 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---CCcEEE
Confidence 455666799999999999853 577889998753311 1 245689999999999999998533222 457999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccc-cccceeecCCCCeEEcccCCcccCCCCC
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
|||++|++|.. +. . .. ...++.+++.+|.|||+.| |+|||| ||+|||++.++.+||+|||+++......
T Consensus 97 mE~~~G~~L~~-~~--~---~~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~ 166 (365)
T PRK09188 97 RGWTEGVPLHL-AR--P---HG---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRG 166 (365)
T ss_pred EEccCCCCHHH-hC--c---cc---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccCc
Confidence 99999999963 21 1 11 1467899999999999999 999999 9999999999999999999998654322
Q ss_pred ------------ccccCCCcCCCcCCCC
Q 011092 214 ------------SYSTNLAFTPPEYLRT 229 (494)
Q Consensus 214 ------------~~~~t~~y~aPE~~~~ 229 (494)
...+++.|++||.+..
T Consensus 167 ~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 167 ALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred chhhhhhhhhhhhhhccCccCCcccCCh
Confidence 2345678999998864
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=198.37 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=192.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCC-CCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hp-nIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.+...+|.|+||.||++... ..+++|.+....... ...|.+|+.++..+.|+ +|+++++++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 345667799999999999976 789999997654332 67799999999999888 799999999777778999999
Q ss_pred CCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCC----
Q 011092 138 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~---- 211 (494)
+.+++|.+++..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977653211 26889999999999999999999999 99999999999999888 799999999874432
Q ss_pred ------CCccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccccccccccC
Q 011092 212 ------GKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 212 ------~~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 278 (494)
.....++..|++||.+.+ ...+...|+||+|++++++++|..|+..... ........... ......
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP-TPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC-Cccccc
Confidence 245578899999999987 5788899999999999999999988654431 11111111111 000000
Q ss_pred CCC----chhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 279 QFT----DDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 279 ~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
... ......+.+++..|+..+|..|.+.......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 1123578999999999999999988877654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=186.06 Aligned_cols=140 Identities=16% Similarity=0.206 Sum_probs=110.3
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC--C-------hHHH-----------------HHHHHHHhccCCCCC
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--D-------PRQF-----------------LEEARSVGQLRNNRL 118 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~~-----------------~~E~~~l~~l~hpnI 118 (494)
.+.||.|++|.||+|...+|+.||||+++..... . ...| ..|+.++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4678999999999999778999999999764221 1 1122 349999999988887
Q ss_pred ccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCcccccccccceeecCCCC
Q 011092 119 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 119 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~l-H~~~~ivH~Dlkp~Nill~~~~~ 197 (494)
.....+... ..+|||||++|++|..... ...+++......++.|++.+|.++ |+.| |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCc
Confidence 544433222 2389999999887765432 245789999999999999999999 6888 99999999999998 478
Q ss_pred eEEcccCCcccCC
Q 011092 198 PRLSTFGLMKNSR 210 (494)
Q Consensus 198 ~kl~Dfgla~~~~ 210 (494)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-23 Score=187.61 Aligned_cols=168 Identities=13% Similarity=0.082 Sum_probs=130.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHH---------HHHHHHHHhccCCCCCccEEEEEecC---
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQ---------FLEEARSVGQLRNNRLTNLLGCCCEG--- 128 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~hpnIv~l~~~~~~~--- 128 (494)
.+++++.+|.|+||.||+... ++..+|||.+.......... |.+|+..+.++.||+|..+..++...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~ 110 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK 110 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence 466777779999999999666 56789999997654433322 67899999999999999999886543
Q ss_pred -----CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEccc
Q 011092 129 -----DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203 (494)
Q Consensus 129 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 203 (494)
+..+|||||++|.+|.++.. ++. ....+++.+|..+|..| ++|||+||+||+++.+| ++|+||
T Consensus 111 ~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 111 TLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred cccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEEC
Confidence 34789999999999988642 333 24569999999999999 99999999999999988 999999
Q ss_pred CCcccCCCCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHH
Q 011092 204 GLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249 (494)
Q Consensus 204 gla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ell 249 (494)
|........... ..++....+..++|+||||+++.-+.
T Consensus 179 g~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 987654322111 01233345667999999999887654
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.5e-24 Score=218.43 Aligned_cols=243 Identities=17% Similarity=0.117 Sum_probs=180.9
Q ss_pred cccCCCCCCCeEEEEEE-cCCCEEEEEEecCC--CCCCh----HHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 65 VSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM--AWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~----~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
...+|.|++|.|+.... .....++.|..... ..... ..+..|+.+-..+.|||++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 34559999998888773 33455555544311 11111 1255688888889999998888777776666666999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 212 (494)
|++ +|..++.. ...++...+-.++.|++.|+.|+|+.| |.|||+|++|++++.+|.+||+|||.+......
T Consensus 403 ~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 403 CPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred ccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 998 99999863 346888899999999999999999999 999999999999999999999999987654322
Q ss_pred ---CccccCCCcCCCcCCCCCCCCC-CCCchhHHHHHHHHHhCCCCCCCchhHHhh--h-ccccccccccccCCCCchhH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTP-ESVIYSFGTLLLDLLSGKHIPPSHALDLIR--D-RNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~-~sDv~slG~vl~elltg~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 285 (494)
....|+-.|+|||++.+..|.+ ..||||.|+++..|++|+.|+......... . ..............+...++
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 558 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLP 558 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhch
Confidence 2456889999999999988876 689999999999999999876432111110 0 00011111111112234567
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+.+|.++|++||.+|.|+.+|++
T Consensus 559 ~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 559 RETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hhHHHHHHHHccCChhheecHHHHhh
Confidence 88999999999999999999999997
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=178.91 Aligned_cols=141 Identities=15% Similarity=0.187 Sum_probs=112.6
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC---------------------C-----hHHHHHHHHHHhccCCCCC
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP---------------------D-----PRQFLEEARSVGQLRNNRL 118 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~hpnI 118 (494)
.+.||+|++|.||+|...+|+.||||+++..... . ...+..|.+.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999768999999999765311 0 1123578999999999998
Q ss_pred ccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCC
Q 011092 119 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 119 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~ 197 (494)
.....+.... .+|||||++|+++..... ...+++......++.|++.++.++|+ .| |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCC
Confidence 6555544332 489999999886544322 23567888999999999999999999 88 99999999999999 899
Q ss_pred eEEcccCCcccCCC
Q 011092 198 PRLSTFGLMKNSRD 211 (494)
Q Consensus 198 ~kl~Dfgla~~~~~ 211 (494)
++|+|||++.....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-23 Score=203.44 Aligned_cols=223 Identities=18% Similarity=0.214 Sum_probs=185.8
Q ss_pred CCCCCCCeEEEEE----EcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceeeecCCC
Q 011092 68 HGEKAPNVVYKGK----LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 68 lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+|.|+||.|+++. .+.|.-+|+|++++.... .......|..++..++ ||.+|++.-.+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 5899999999876 234788999999763322 1225567888999996 99999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCccccCCC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 220 (494)
|.|...+. ....+++.....+...++-++.++|+.+ ++|||+|++||+++.+|.+++.|||+.+..-.....+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99998886 3456778888888999999999999999 99999999999999999999999999988766666699999
Q ss_pred cCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCC
Q 011092 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300 (494)
Q Consensus 221 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 300 (494)
|||||.+. ....++|.||||++.+||+||..||..+....+.. .....|......+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~----------~~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILK----------AELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhh----------hccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999998 56779999999999999999998887632222211 1123466778899999999999999
Q ss_pred CCCCC
Q 011092 301 RERPN 305 (494)
Q Consensus 301 ~~Rps 305 (494)
..|.-
T Consensus 227 ~nrLg 231 (612)
T KOG0603|consen 227 ENRLG 231 (612)
T ss_pred HHHhc
Confidence 99953
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-21 Score=168.57 Aligned_cols=177 Identities=17% Similarity=0.137 Sum_probs=135.4
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC----hHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCC
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD----PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
..|++|+||+||.+.. .+..++.+.+....+-. ...|.+|+++|++| +|++|++++++ +..+++|||+.|
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G 82 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAG 82 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecC
Confidence 4569999999997765 67788888887655421 22578999999999 45889999986 346999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccc-cccceeecCCCCeEEcccCCcccCCCCCc-----
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDGKS----- 214 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~~~----- 214 (494)
.+|...+. . ....++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++........
T Consensus 83 ~~L~~~~~---~------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L 152 (218)
T PRK12274 83 AAMYQRPP---R------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLL 152 (218)
T ss_pred ccHHhhhh---h------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHH
Confidence 99975442 1 12357889999999999999 999999 79999999999999999999985543321
Q ss_pred ------------cccCCCcCCCcCCCCC-CCC-CCCCchhHHHHHHHHHhCCCCCCC
Q 011092 215 ------------YSTNLAFTPPEYLRTG-RVT-PESVIYSFGTLLLDLLSGKHIPPS 257 (494)
Q Consensus 215 ------------~~~t~~y~aPE~~~~~-~~~-~~sDv~slG~vl~elltg~~p~~~ 257 (494)
...++.|++|+...-- ..+ .+.++++-|.-+|.++|++.+..+
T Consensus 153 ~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 153 AREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0135667777644321 223 467888999999999999976544
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-22 Score=204.24 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=176.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCC-CCChHHHHHHHHH--HhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMA-WPDPRQFLEEARS--VGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+....+.+|++.|=.|.+|+++.|. |+||++-+.. .-+.+.|.+.++- ...++|||.+.+.-+-....-.|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4445677799999999999988886 8999985543 3334455444333 4445999999998888888888999999
Q ss_pred CCCCCHHHHhcccCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----CC
Q 011092 138 MPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DG 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~ 212 (494)
+. .+|.|.+. .+| +...+..=|+.|++.||..+|..| |+|||||.+||||+.-..+.|+||.-.+..- +.
T Consensus 103 vk-hnLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 103 VK-HNLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred Hh-hhhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 96 89999994 444 455667778999999999999999 9999999999999999999999998766431 11
Q ss_pred Cc-------cccCCCcCCCcCCCCC----------C-CCCCCCchhHHHHHHHHHhC-CCCCCCchhHHhhhcccccccc
Q 011092 213 KS-------YSTNLAFTPPEYLRTG----------R-VTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTD 273 (494)
Q Consensus 213 ~~-------~~~t~~y~aPE~~~~~----------~-~~~~sDv~slG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~ 273 (494)
.. ......|.|||.+... + .+++-||||+|||+.||++- ++||.-.-.-..+.+. .....
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e 256 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPE 256 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHH
Confidence 11 1123569999987431 2 67889999999999999885 5444322111122211 11111
Q ss_pred ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHh
Q 011092 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 274 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L 313 (494)
. ....+.+ ..++.++..|++.||..|.++++.|+.-
T Consensus 257 ~-~Le~Ied---~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 257 Q-LLEKIED---VSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred H-HHHhCcC---ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 1 1111222 3689999999999999999999999863
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-21 Score=173.37 Aligned_cols=111 Identities=24% Similarity=0.298 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
+....++.++..|+.+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+|+.|++||+.||.+||.+.++|-+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 45567889999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|.+|+.+|+|++|++.|++||+|||.+...+
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K 186 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNESYK 186 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcHHHH
Confidence 99999999999999999999999999997543
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-21 Score=180.59 Aligned_cols=227 Identities=20% Similarity=0.201 Sum_probs=147.4
Q ss_pred cccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhccCC----------CCCccEEEEEe----
Q 011092 65 VSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRN----------NRLTNLLGCCC---- 126 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------pnIv~l~~~~~---- 126 (494)
.+.||.|+++.||.+++. +|+.+|||++..... ...+.+.+|.-....+.+ -.++-.++...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 356699999999999964 599999999854332 224567777666655432 12222222221
Q ss_pred -----cC---C-----ccceeeecCCCCCHHHHhcc---cCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Q 011092 127 -----EG---D-----ERLLVAEYMPNETLAKHLFH---WET--HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188 (494)
Q Consensus 127 -----~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~ 188 (494)
.. + +.+++|+-+. ++|.+++.- ... ..+....++.+..|+++.+++||+.| ++|+||+|+
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~ 174 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPE 174 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGG
T ss_pred CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEeccccee
Confidence 11 1 2367888885 888887642 111 12334566778899999999999999 999999999
Q ss_pred ceeecCCCCeEEcccCCcccCCCCCc-cccCCCcCCCcCCCC--------CCCCCCCCchhHHHHHHHHHhCCCCCCCch
Q 011092 189 RILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRT--------GRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259 (494)
Q Consensus 189 Nill~~~~~~kl~Dfgla~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~sDv~slG~vl~elltg~~p~~~~~ 259 (494)
|++++.+|.++|+||+.....+.... ...+..|.+||.... -.+|.+.|.|+||+++|.|++|..||....
T Consensus 175 nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~ 254 (288)
T PF14531_consen 175 NFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSS 254 (288)
T ss_dssp GEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCG
T ss_pred eEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCC
Confidence 99999999999999997766554333 344577999997633 247889999999999999999998886543
Q ss_pred hHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCC
Q 011092 260 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303 (494)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 303 (494)
....... ....+. +.|+.+..||..+|+.+|.+|
T Consensus 255 ~~~~~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 255 PEADPEW---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGSTSGG---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccccccc---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 2211111 122344 778999999999999999987
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=168.73 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=104.6
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-----CCCCCccEEEEEecCC---c-cceeee
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-----RNNRLTNLLGCCCEGD---E-RLLVAE 136 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~---~-~~lv~e 136 (494)
..||+|+||.||. ...++.. +||++........+.+.+|+.+++.+ .||||++++|++.++. . +.+|+|
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 4559999999996 3233444 69998765444567899999999999 5799999999998864 3 337899
Q ss_pred c--CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCcccccccccceeecC----CCCeEEcccCC
Q 011092 137 Y--MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQAL-EYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGL 205 (494)
Q Consensus 137 ~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~~lH~~~~ivH~Dlkp~Nill~~----~~~~kl~Dfgl 205 (494)
| ++++||.+++.. ..+++. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+-
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 9 667999999953 346655 35688888888 9999999 999999999999973 34799999553
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-21 Score=188.80 Aligned_cols=207 Identities=22% Similarity=0.333 Sum_probs=159.6
Q ss_pred HhccCCCCCccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCc-cccccccc
Q 011092 110 VGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA-LYHDLNAY 188 (494)
Q Consensus 110 l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i-vH~Dlkp~ 188 (494)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++-....++++|+.||.|||+.. | .|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 4678999999999999999999999999999999999975 3567888899999999999999999986 5 89999999
Q ss_pred ceeecCCCCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCC-------CCCCCCchhHHHHHHHHHhCCCCC
Q 011092 189 RILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGR-------VTPESVIYSFGTLLLDLLSGKHIP 255 (494)
Q Consensus 189 Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~-------~~~~sDv~slG~vl~elltg~~p~ 255 (494)
|.++|..+.+||+|||+....... ........|.|||.+.... .+.+.||||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999997765421 1112346799999987631 467899999999999999999988
Q ss_pred CCchhHHhhhcccccc---ccccccCCCC-c-hhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 256 PSHALDLIRDRNLQML---TDSCLEGQFT-D-DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
+..............+ ....+.+... . ..++++..++..||..+|..||+++.+...++.+..
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 6532111100000000 1111111111 1 344579999999999999999999999998877654
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-20 Score=171.52 Aligned_cols=192 Identities=16% Similarity=0.201 Sum_probs=143.5
Q ss_pred CCCCCccEEEEEecC---------------------------CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHH
Q 011092 114 RNNRLTNLLGCCCEG---------------------------DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH 166 (494)
Q Consensus 114 ~hpnIv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 166 (494)
+|||||+++++|.+. ...|+||.-.+ .||..++- .+..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh---cCCCchHHHHHHHHH
Confidence 699999999877542 23689999886 89999994 455777778889999
Q ss_pred HHHHHHHHHhcCCcccccccccceee--cCCC--CeEEcccCCcccCCC----------CCccccCCCcCCCcCCCCCC-
Q 011092 167 LAQALEYCTSKGRALYHDLNAYRILF--DEDG--NPRLSTFGLMKNSRD----------GKSYSTNLAFTPPEYLRTGR- 231 (494)
Q Consensus 167 i~~~l~~lH~~~~ivH~Dlkp~Nill--~~~~--~~kl~Dfgla~~~~~----------~~~~~~t~~y~aPE~~~~~~- 231 (494)
+++|+.|||.+| |.|||+|++|||+ ++++ .+.|+|||++--... .....|.-.-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 3444 478999997653221 12334667789999986433
Q ss_pred -----CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCCh
Q 011092 232 -----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 306 (494)
Q Consensus 232 -----~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 306 (494)
.-.++|.|+.|.+.||+++...||.....-.+.....++-. ....|..+++.+.+++...|+.||.+|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~q----LPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQ----LPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhh----CCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 23589999999999999999999976432222222222111 123455667889999999999999999987
Q ss_pred HHHHHHhc
Q 011092 307 KSLVTALS 314 (494)
Q Consensus 307 ~~vl~~L~ 314 (494)
.-....|+
T Consensus 505 ~iAANvl~ 512 (598)
T KOG4158|consen 505 NIAANVLN 512 (598)
T ss_pred cHHHhHHH
Confidence 76665553
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-19 Score=161.86 Aligned_cols=134 Identities=17% Similarity=0.199 Sum_probs=113.4
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--------hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..||+|++|.||+|.. +|..|++|......... ...+.+|+.++..+.|++|+....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4579999999999987 66789999876433221 23577899999999999998888777777888999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
++|++|.+++... .. .+..++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988531 12 78899999999999999999 99999999999999 78899999998764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-19 Score=191.32 Aligned_cols=239 Identities=18% Similarity=0.180 Sum_probs=174.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC---CCCCccEEEEEecCCccceeeecC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+-+.+|.|+||.||+|...+|+.||+|+-+..+ ..+|.--.+++.+|+ -+-|..+...+...+..+||+||.
T Consensus 700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~ 776 (974)
T KOG1166|consen 700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYS 776 (974)
T ss_pred EEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecc
Confidence 34556779999999999998789999999987654 233444445555665 244556666666677889999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-------CCCCeEEcccCCccc---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-------EDGNPRLSTFGLMKN--- 208 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-------~~~~~kl~Dfgla~~--- 208 (494)
+.|||.+++. ..+.+++..++.++.|+++.+..||..+ |||+||||+|+||. ++..++|+|||.+..
T Consensus 777 ~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 777 PYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred ccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 9999999997 5567999999999999999999999999 99999999999994 234589999998763
Q ss_pred CCCCC---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 209 SRDGK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 209 ~~~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
..+.. ...+|-.+-++|...|.+.+..+|.|+|..+++.|+.|+..- ...+....+... ++ .+. --
T Consensus 854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~~-~~-Ry~--~~ 922 (974)
T KOG1166|consen 854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKTN-FP-RYW--KR 922 (974)
T ss_pred cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecccc-ch-hhh--hH
Confidence 33333 335678899999999999999999999999999999997421 111111111110 10 011 11
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.-..+|...+|..|-..=|...++...|+.+.
T Consensus 923 ~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 923 DMWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred HHHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 34557777888733333377777777776553
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-19 Score=163.24 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=115.2
Q ss_pred HHHHHhcCCccccccccCCCCCCCeEEEEE--EcCCCEEEEEEecCCCCC-------------------C-----hHHHH
Q 011092 51 QLKNATSGFAVENIVSEHGEKAPNVVYKGK--LENQRRIAVKRFNRMAWP-------------------D-----PRQFL 104 (494)
Q Consensus 51 ~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~~~~~ 104 (494)
++....+.=..+.+.+.||.|++|.||+|. ..+|+.||||+++..... . ...+.
T Consensus 19 ~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (237)
T smart00090 19 ALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAE 98 (237)
T ss_pred HHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHH
Confidence 333333333356677888999999999998 567999999999754211 0 12356
Q ss_pred HHHHHHhccCCCC--CccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCccc
Q 011092 105 EEARSVGQLRNNR--LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182 (494)
Q Consensus 105 ~E~~~l~~l~hpn--Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH 182 (494)
.|+.++.++.+.+ ++.++++ ...++||||++|.+|..... ....+.......++.||+.+|.+||+.|.++|
T Consensus 99 ~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH 172 (237)
T smart00090 99 KEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVH 172 (237)
T ss_pred HHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEe
Confidence 8999999997533 4445543 23589999999988876543 23346666778999999999999999876999
Q ss_pred ccccccceeecCCCCeEEcccCCcccCC
Q 011092 183 HDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 183 ~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
|||||+||+++ ++.++|+|||.+....
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 99999999999 8899999999887543
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=157.07 Aligned_cols=129 Identities=18% Similarity=0.244 Sum_probs=106.6
Q ss_pred CCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--------hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 68 HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 68 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
||+|++|.||+|.. +|..|++|......... ..++.+|++++..++|+++.....++...+..++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999995 56889999965432211 2457789999999998877666666666677899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
|++|.+.+... . . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~~--~-~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEG--N-D------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhc--H-H------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999887421 1 1 78999999999999999 99999999999999 89999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-19 Score=175.55 Aligned_cols=166 Identities=24% Similarity=0.357 Sum_probs=125.7
Q ss_pred ccceeeecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 130 ERLLVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
.+++.|++|.-.+|.+++.++. ....++...+.++.|++.|+.| ++ .+|+|+||.||+...+..+||+|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 4789999999999999997433 3456788899999999999999 77 99999999999999999999999999765
Q ss_pred CCCCC----------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCC-CCC-CchhHHhhhccccccccccc
Q 011092 209 SRDGK----------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPP-SHALDLIRDRNLQMLTDSCL 276 (494)
Q Consensus 209 ~~~~~----------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~-p~~-~~~~~~~~~~~~~~~~~~~~ 276 (494)
..... ...||..||+||.+.+..|+.++||||||++|+||++-.. .+. ..+...++.+.+ ++..
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~i----p~~~ 481 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGII----PPEF 481 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCC----ChHH
Confidence 44322 3568999999999999999999999999999999998321 111 011111222211 1111
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHH
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKS 308 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 308 (494)
.... ++-..|+.+++.+.|.+||++.+
T Consensus 482 ~~d~-----p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 482 LQDY-----PEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred hhcC-----cHHHHHHHHhcCCCcccCchHHH
Confidence 1111 24568999999999999994443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-19 Score=183.09 Aligned_cols=201 Identities=19% Similarity=0.184 Sum_probs=144.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+.+.|+.+..|+||-||..+++ +.+++|+ ++++.+. +++- ++.....|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l-----ilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----ILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhh-cccccch-----hhhc--cccccCCccee--------------------
Confidence 3455666689999999999965 4778998 4433221 1111 33333344433
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--------
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------- 211 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-------- 211 (494)
|+-...+. ..++++.+- +.+++|||+.+ |+|||+||+|.+|+.-|.+|+.|||+.+....
T Consensus 136 -gDc~tllk--~~g~lPvdm--------vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 -GDCATLLK--NIGPLPVDM--------VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred -chhhhhcc--cCCCCcchh--------hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 33344443 223344322 67899999999 99999999999999999999999998773211
Q ss_pred -----------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCC
Q 011092 212 -----------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 212 -----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (494)
....+||+.|.|||++....|+..+|+|++|+|+||.+.|+.||++++.+.+....+... ....+-
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~---i~wpE~ 280 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD---IEWPEE 280 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh---cccccc
Confidence 123478999999999998889999999999999999999999999986655544333221 111222
Q ss_pred CchhHHHHHHHHHHHccCCCCCCC
Q 011092 281 TDDDGTELVRLASRCLQYEPRERP 304 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rp 304 (494)
....+.++.+++.++|+.+|..|-
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhc
Confidence 445668999999999999999994
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-18 Score=152.62 Aligned_cols=136 Identities=15% Similarity=0.162 Sum_probs=107.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC----------------------ChHHHHHHHHHHhccCCCC--
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP----------------------DPRQFLEEARSVGQLRNNR-- 117 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~hpn-- 117 (494)
+.+...||.|+||.||++...+|+.||||++...... ....+..|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4445667999999999999878999999987643210 0123567899999998774
Q ss_pred CccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC
Q 011092 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 118 Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~ 197 (494)
++..++. ...++||||++|++|..... ......++.+++.++.++|+.+ ++|+||||+||++++++.
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCc
Confidence 4555542 34589999999999976542 0235678899999999999999 999999999999999999
Q ss_pred eEEcccCCcccCC
Q 011092 198 PRLSTFGLMKNSR 210 (494)
Q Consensus 198 ~kl~Dfgla~~~~ 210 (494)
++|+|||++....
T Consensus 164 ~~liDfg~~~~~~ 176 (198)
T cd05144 164 IYIIDWPQMVSTD 176 (198)
T ss_pred EEEEECCccccCC
Confidence 9999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.6e-18 Score=174.27 Aligned_cols=131 Identities=20% Similarity=0.222 Sum_probs=107.1
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEe-cCC-CCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRF-NRM-AWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~-~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+.||+|+||+||+|.+.+. .+++|+. ... ... ..+++.+|++++..++|++|+....++......++|||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred cceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence 45569999999999987544 3444432 211 111 12468899999999999999998888887778899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCccc
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
|++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ .++.++|+|||+++.
T Consensus 417 ~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 417 YIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred ecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 999999999884 35678999999999999999 9999999999999 678899999999865
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.4e-17 Score=140.44 Aligned_cols=132 Identities=15% Similarity=0.049 Sum_probs=112.3
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCC--CCCccEEEEEecCCccceeeecCCCCC
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN--NRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
++.+|.|.++.||++...+ ..+++|....... ...+..|+.++..++| +++++++++....+..+++|||++|++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4567999999999999754 7899999865442 4678999999999976 589999999888888999999999877
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
+..+ +......++.+++.+|.++|.. + ++|+|++|+||++++.+.++++|||.+...
T Consensus 80 ~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 80 LDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCC
Confidence 7542 5567778899999999999984 5 999999999999999899999999987653
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=146.82 Aligned_cols=133 Identities=19% Similarity=0.187 Sum_probs=103.0
Q ss_pred CC-CCCCCeEEEEEEcCCCEEEEEEecCCCC-------------CChHHHHHHHHHHhccCCCCC--ccEEEEEecCCc-
Q 011092 68 HG-EKAPNVVYKGKLENQRRIAVKRFNRMAW-------------PDPRQFLEEARSVGQLRNNRL--TNLLGCCCEGDE- 130 (494)
Q Consensus 68 lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnI--v~l~~~~~~~~~- 130 (494)
+| .|+.|+||+.... +..++||.+..... .....+.+|+.++.+++|++| +..+++......
T Consensus 39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~ 117 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL 117 (239)
T ss_pred eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence 35 6777889988874 67899998854211 123567889999999998875 677776544322
Q ss_pred ---cceeeecCCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 131 ---RLLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 131 ---~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
.++|||+++| .+|.+++. ..+++... +.+|+.+|.+||++| |+||||||.|||++.++.++|+|||.+
T Consensus 118 ~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~~----~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 118 FYRADILIERIEGARDLVALLQ---EAPLSEEQ----WQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred ceeeeEEEEecCCCCCHHHHHh---cCCCCHHH----HHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 2599999997 69998884 23455543 568999999999999 999999999999999899999999987
Q ss_pred ccC
Q 011092 207 KNS 209 (494)
Q Consensus 207 ~~~ 209 (494)
...
T Consensus 190 ~~~ 192 (239)
T PRK01723 190 ELR 192 (239)
T ss_pred ccC
Confidence 653
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=143.08 Aligned_cols=137 Identities=15% Similarity=0.179 Sum_probs=98.5
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHH----------------------HHHHHHHhccCCCC--C
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQF----------------------LEEARSVGQLRNNR--L 118 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~----------------------~~E~~~l~~l~hpn--I 118 (494)
.+.||+|+||.||+|...+|+.||||++....... ...+ ..|...+..+.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 35679999999999997789999999987543211 1111 35666666664433 4
Q ss_pred ccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCC
Q 011092 119 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 119 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~ 197 (494)
...+++ ...++||||++|+++...... ..... .....++.+++.++.++|. .+ ++|+||||+||+++ ++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~--~~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLK--DVRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhh--hhhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CCc
Confidence 555543 245899999998543221110 00011 5678899999999999999 88 99999999999999 999
Q ss_pred eEEcccCCcccCC
Q 011092 198 PRLSTFGLMKNSR 210 (494)
Q Consensus 198 ~kl~Dfgla~~~~ 210 (494)
++|+|||.+....
T Consensus 153 ~~liDfg~a~~~~ 165 (187)
T cd05119 153 VYIIDVPQAVEID 165 (187)
T ss_pred EEEEECccccccc
Confidence 9999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5e-16 Score=132.07 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 466 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 466 (494)
.++..|..+++.|+|++|+..|.+++.++|. +..+|.++|.++..+|++++|+..|++|++++|+++.+++++|.++..
T Consensus 26 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~ 104 (144)
T PRK15359 26 TVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKM 104 (144)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 3677899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcccccccccc
Q 011092 467 MGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 467 ~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|++++|+..|++|++++|.+....
T Consensus 105 ~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 105 MGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999987543
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.2e-16 Score=150.66 Aligned_cols=106 Identities=27% Similarity=0.400 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
+......|+.+|+.|+|.+|++.|++||..+|+ ++.+|.|||.||.+++.+..|+.|++++|+++|++.++|++.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 667778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhcccccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
..+.+|++|+++|.+|+++||++.++.
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~e~~ 463 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNAEAI 463 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhHHHH
Confidence 999999999999999999999988753
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=8e-16 Score=130.38 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 455 (494)
.....+..+...|+.+|.+|+|++|...|..||++.|.. ...+|.|+|.|+++++.++.||.+|.+||+|+|.+.+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 446778899999999999999999999999999999973 3468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhccccccccccc
Q 011092 456 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 456 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
|+.+|+.+|.++.+|++|+.+|++.+++||++.+|.+
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ear~ 206 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRREARE 206 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHHH
Confidence 9999999999999999999999999999999987654
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-17 Score=170.85 Aligned_cols=249 Identities=15% Similarity=0.154 Sum_probs=186.7
Q ss_pred CccccccccCCCCCCCeEEEEEEcC--CCEEEEEEecCCC--CCChHHHHHHHHHHhccC-CCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMA--WPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~l 133 (494)
...+.+++.||.|+|+.|-...... ...+|+|.+.... .........|..+-..+. |+|++.+++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3456667778999999998877433 4567777765443 112334455888888886 9999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCcccccccccceeecCCC-CeEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 211 (494)
+++|..|+++.+-+........+....-.++.|+..++.|+| ..+ +.|+|+||+|.+++..+ .++++|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999998883222225666677788999999999999 888 99999999999999999 999999999886655
Q ss_pred -CC------cccc-CCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccccc--ccCCC
Q 011092 212 -GK------SYST-NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC--LEGQF 280 (494)
Q Consensus 212 -~~------~~~~-t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 280 (494)
.. ...| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+....... .......... .....
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLP 254 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCc
Confidence 21 2457 8999999999874 45778999999999999999997764322111 1111111111 01122
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.........+++.+++..+|..|.+.+++-.
T Consensus 255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 255 WNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccCChhhhhcccccccCCchhccccccccc
Confidence 3345577889999999999999999888764
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.8e-16 Score=148.17 Aligned_cols=104 Identities=28% Similarity=0.402 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
+..+..+|++++..|||+.|+..|++||.++|. +..+|.||+.+|..+|+|++|++|..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 456789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhcccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
..+|+|++|+..|+++|+.||.|..
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~ 105 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQ 105 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHH
Confidence 9999999999999999999999864
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.61 E-value=9e-16 Score=140.22 Aligned_cols=112 Identities=22% Similarity=0.300 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
+.+..+..+.++|+.||++|.|++||+||.++|..+|. ++.++.|||.+|+++.+|..|..||+.|+.||-.+.+||-+
T Consensus 92 ~LL~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSR 170 (536)
T KOG4648|consen 92 QLLKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSR 170 (536)
T ss_pred HHHHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHH
Confidence 34566667899999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
+|.+...+|+.+||.++++.+|+|.|++.+-++
T Consensus 171 R~~AR~~Lg~~~EAKkD~E~vL~LEP~~~ELkK 203 (536)
T KOG4648|consen 171 RMQARESLGNNMEAKKDCETVLALEPKNIELKK 203 (536)
T ss_pred HHHHHHHHhhHHHHHHhHHHHHhhCcccHHHHH
Confidence 999999999999999999999999999876443
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.7e-15 Score=121.80 Aligned_cols=101 Identities=16% Similarity=-0.012 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
++.+.++..|..++..|+|++|...|+-+..++|. +..+|+++|.|+..+|+|.+||..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 56678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLE 484 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~ 484 (494)
|++.+|+.++|+++|+.|+..-
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999876
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-15 Score=141.95 Aligned_cols=107 Identities=24% Similarity=0.322 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
++.+.+.+++.+|+.+|++|+|++||++|++||+++|+ .+..|.||+.||..+|++++.++++.+||+++|++++|+++
T Consensus 110 ~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~R 188 (606)
T KOG0547|consen 110 ERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLR 188 (606)
T ss_pred HHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 44678999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
|+.++..+|++++|+.+.. ++-|....+
T Consensus 189 RA~A~E~lg~~~eal~D~t-v~ci~~~F~ 216 (606)
T KOG0547|consen 189 RASAHEQLGKFDEALFDVT-VLCILEGFQ 216 (606)
T ss_pred HHHHHHhhccHHHHHHhhh-HHHHhhhcc
Confidence 9999999999999999864 334444333
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.6e-15 Score=143.28 Aligned_cols=105 Identities=24% Similarity=0.268 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 465 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 465 (494)
..+...|..++..|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 34788899999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHhhcccccccccc
Q 011092 466 AMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 466 ~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+|+|++|+.+|++|++++|.+..+.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~~~~ 107 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDSRFT 107 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999987643
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.6e-15 Score=138.94 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--------------cHHHHhHHHHHHHhcCChHHHHHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAMQ 445 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~ 445 (494)
+.+..+......|+.+|+.|+|..|+..|++|+..-... ...++.|+++||.++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 478889999999999999999999999999998653321 136799999999999999999999999
Q ss_pred HHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccccc
Q 011092 446 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 446 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
+|+++|++++|+|++|.||..+|+|+.|+.+|++|++++|.|..++.
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~~~ 329 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAARA 329 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHHHH
Confidence 99999999999999999999999999999999999999999987653
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.5e-15 Score=146.90 Aligned_cols=138 Identities=19% Similarity=0.173 Sum_probs=97.8
Q ss_pred cCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCCh----------------------------------------HHHHHH
Q 011092 67 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP----------------------------------------RQFLEE 106 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~E 106 (494)
.+|.|++|.||+|++.+|+.||||+.++...... -.|.+|
T Consensus 124 plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~E 203 (437)
T TIGR01982 124 PLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRRE 203 (437)
T ss_pred ceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHH
Confidence 5799999999999998999999999876421100 024556
Q ss_pred HHHHhccC----CCCCccEEEEEe-cCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHH-HHHHHHhcCCc
Q 011092 107 ARSVGQLR----NNRLTNLLGCCC-EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ-ALEYCTSKGRA 180 (494)
Q Consensus 107 ~~~l~~l~----hpnIv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~-~l~~lH~~~~i 180 (494)
+..+.++. |.+-+.+-.++. .....+|||||++|++|.+..... ....+ ...++..++. .+..+|..| +
T Consensus 204 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~---~~~ia~~~~~~~l~ql~~~g-~ 278 (437)
T TIGR01982 204 AANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD-EAGLD---RKALAENLARSFLNQVLRDG-F 278 (437)
T ss_pred HHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH-hcCCC---HHHHHHHHHHHHHHHHHhCC-c
Confidence 66665552 322233222332 234579999999999998876421 11222 3455666655 478899999 9
Q ss_pred ccccccccceeecCCCCeEEcccCCcccC
Q 011092 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 181 vH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
+|+|+||.||+++.+++++++|||++...
T Consensus 279 ~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 279 FHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred eeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 99999999999999999999999997654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.3e-14 Score=138.82 Aligned_cols=109 Identities=13% Similarity=0.160 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.+++....+|..|+-.|+|++|+++|+.||..+|+ +...|+.+|+++....+..+||+.|.+|++|.|.++.++||+|+
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 46777888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
+++.+|.|+||++.|-.||.+.++..+..+
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~ks~~~~~ 536 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRKSRNHNK 536 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhccccccc
Confidence 999999999999999999999999665543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.6e-15 Score=145.83 Aligned_cols=239 Identities=21% Similarity=0.256 Sum_probs=181.6
Q ss_pred ccccCCC--CCCCeEEEEEE---cCCCEEEEEEecC--CCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 64 IVSEHGE--KAPNVVYKGKL---ENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 64 ~i~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
....+|. |.+|.||.+.. .++..+|+|+-+. ........=.+|+....++ .|+|.++.+..+...+..++-+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt 197 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT 197 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence 3466688 99999999986 3478899998433 2222334446788888888 6999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCC
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ----ALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR 210 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 210 (494)
|++. .+|..+.+.. ..-++....+.+..+... ||..+|+.+ ++|-|+||.||++..+ ...+++|||+.....
T Consensus 198 E~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~ 274 (524)
T KOG0601|consen 198 ELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKIS 274 (524)
T ss_pred cccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEcc
Confidence 9994 8888887642 234777788888888888 999999998 9999999999999988 789999999988765
Q ss_pred CCC---------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 211 DGK---------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 211 ~~~---------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
... ...+...|++||... +.++..+|+|++|.++.+..++..++.......|.+ +.....+.++.
T Consensus 275 ~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-----~r~~~ip~e~~ 348 (524)
T KOG0601|consen 275 DGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-----LRQGYIPLEFC 348 (524)
T ss_pred CCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-----cccccCchhhh
Confidence 432 114567899999987 578899999999999999999987654332121211 11111223334
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+..+...+..+++.+|..|++...+..
T Consensus 349 ~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 349 EGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 444566777999999999999998877654
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.1e-14 Score=138.51 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=116.5
Q ss_pred hhHHHHHHHhhcccCccchhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHH
Q 011092 351 LTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY 430 (494)
Q Consensus 351 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~ 430 (494)
+..+..+..+++..+... .+....+.-...-+.+..++|..|-++|++++|+.+|.+||+++|. .+.+|.|+|.+|
T Consensus 357 m~NLgni~~E~~~~e~A~---~ly~~al~v~p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ 432 (966)
T KOG4626|consen 357 MNNLGNIYREQGKIEEAT---RLYLKALEVFPEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTY 432 (966)
T ss_pred HHHHHHHHHHhccchHHH---HHHHHHHhhChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHH
Confidence 345555555555443322 2233334444566788999999999999999999999999999999 999999999999
Q ss_pred HhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 431 LMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
..+|+.+.|+++|++||.++|.+++|+.|+|.+|...|+..+|++.|+.||+|+|+..+|-
T Consensus 433 ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~kDsGni~~AI~sY~~aLklkPDfpdA~ 493 (966)
T KOG4626|consen 433 KEMGDVSAAIQCYTRAIQINPTFAEAHSNLASIYKDSGNIPEAIQSYRTALKLKPDFPDAY 493 (966)
T ss_pred HHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHHHhhccCCcHHHHHHHHHHHccCCCCchhh
Confidence 9999999999999999999999999999999999999999999999999999999998764
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.7e-14 Score=133.21 Aligned_cols=105 Identities=12% Similarity=-0.035 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..|+.+|..+...|++++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+..|++|++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 55778999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+++..|++++|+++|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999875
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-13 Score=115.74 Aligned_cols=111 Identities=13% Similarity=0.102 Sum_probs=104.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.....++...+..|..++..|+|++|+..|++++..+|+ +..++.++|.+|..+|++++|+..++++++++|+++..++
T Consensus 11 ~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 89 (135)
T TIGR02552 11 GLDSEQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYF 89 (135)
T ss_pred cCChhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 344556778899999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 459 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
++|.++..+|++++|+..|+++++++|.+...
T Consensus 90 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 121 (135)
T TIGR02552 90 HAAECLLALGEPESALKALDLAIEICGENPEY 121 (135)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhccccchH
Confidence 99999999999999999999999999988763
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-14 Score=129.72 Aligned_cols=196 Identities=18% Similarity=0.233 Sum_probs=139.6
Q ss_pred HHHHhccCCCCCccEEEEEecCC-----ccceeeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011092 107 ARSVGQLRNNRLTNLLGCCCEGD-----ERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGR 179 (494)
Q Consensus 107 ~~~l~~l~hpnIv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ 179 (494)
...|-++-|.|||+++.|+.+.. ...++.||+..|+|..+|++. ....+......+|+.||+.||.|||+..|
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 34556667999999999987643 367899999999999999853 34567788889999999999999999764
Q ss_pred -cccccccccceeecCCCCeEEcccCCccc------CCC--CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh
Q 011092 180 -ALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRD--GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250 (494)
Q Consensus 180 -ivH~Dlkp~Nill~~~~~~kl~Dfgla~~------~~~--~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt 250 (494)
|+|+++..+-|++..+|-+|++---.... ... .....+-++|.+||.-.....+.++|||+||...++|..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 89999999999999999888753211110 000 111234588999998877778889999999999999988
Q ss_pred CCCCC-CCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 251 GKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 251 g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+..-. .++............+.. -....-+.++.+|++..|..||+|++++-
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~~---------len~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVIIG---------LENGLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred heeccCCCcceeehhhhhhhheee---------ccCccccCcCcccccCCCCCCcchhhhhc
Confidence 86432 111111111111111000 00112346889999999999999999875
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-13 Score=120.98 Aligned_cols=111 Identities=13% Similarity=0.039 Sum_probs=102.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHH-HhcCC--hHHHHHHHHHHHhhCCcch
Q 011092 378 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDM--PQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~al~l~p~~~ 454 (494)
......++..|..+|..+...|+|++|+..|++|++++|+ +..++.+.|.++ ...|+ +++|+..++++++++|+++
T Consensus 66 L~~~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~ 144 (198)
T PRK10370 66 IRANPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEV 144 (198)
T ss_pred HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCCh
Confidence 3445577889999999999999999999999999999999 999999999875 67787 5999999999999999999
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 455 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 455 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
.+++++|.+++.+|+|++|+.+|+++++++|.+.+
T Consensus 145 ~al~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~~ 179 (198)
T PRK10370 145 TALMLLASDAFMQADYAQAIELWQKVLDLNSPRVN 179 (198)
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 99999999999999999999999999999998764
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-13 Score=135.50 Aligned_cols=115 Identities=12% Similarity=0.040 Sum_probs=109.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHH
Q 011092 377 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 456 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a 456 (494)
...-....+.+++++|+.+..+|.+++|+..|.+|++..|. .+++++|+|.+|..+|++++|+.+|+.||+++|.+++|
T Consensus 346 aL~l~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda 424 (966)
T KOG4626|consen 346 ALRLCPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADA 424 (966)
T ss_pred HHHhCCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHH
Confidence 34445567889999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCChHHHHHHHHHhhccccccccccc
Q 011092 457 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 457 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
|.|+|..|-.+|+.++|+++|.+||.++|..++|+.
T Consensus 425 ~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhs 460 (966)
T KOG4626|consen 425 LSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHS 460 (966)
T ss_pred HHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHh
Confidence 999999999999999999999999999999998875
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-13 Score=128.27 Aligned_cols=105 Identities=22% Similarity=0.298 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.+..+.+..+|+.+|++|+|..|.++|+.||.++|++ ++.+|.|||.++..+|+.++||.+|+.|++|||.+.+|+.
T Consensus 246 ~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall 325 (486)
T KOG0550|consen 246 PKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALL 325 (486)
T ss_pred HHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHH
Confidence 4667889999999999999999999999999999984 5678999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 459 LQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
++|.|++.+++|++|+++|++|++++..
T Consensus 326 ~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 326 RRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999998766
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.1e-13 Score=118.16 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=96.1
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCC-ccEEEEEecCCccceeeecCCCCCHH
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYMPNETLA 144 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lv~e~~~~gsL~ 144 (494)
+.++.|.++.||++... +..|++|....... ....+..|+.++..+.+.++ ++++.+.. ...++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence 45688999999999874 67899999765432 22356789999999965554 45655543 3458999999998875
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----cccccccccceeecCCCCeEEcccCCccc
Q 011092 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 145 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~----ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
... . ....++.+++.+|..||+.+. ++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 420 1 123456799999999999871 49999999999999 67899999998653
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.5e-13 Score=137.10 Aligned_cols=137 Identities=16% Similarity=0.158 Sum_probs=92.1
Q ss_pred ccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCC--------------------------Ch--------------HHHH
Q 011092 66 SEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP--------------------------DP--------------RQFL 104 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~~--------------~~~~ 104 (494)
..+|+|++|.||+|++.+ |+.||||++++.... +. -.|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 567999999999999876 999999999754210 00 1245
Q ss_pred HHHHHHhccC----CCCCccEEEEEec-CCccceeeecCCCCCHHHHhcccCCC----CCCHHHHHHHHHHHHHHHHHHH
Q 011092 105 EEARSVGQLR----NNRLTNLLGCCCE-GDERLLVAEYMPNETLAKHLFHWETH----PMKWAMRLRVVLHLAQALEYCT 175 (494)
Q Consensus 105 ~E~~~l~~l~----hpnIv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~----~l~~~~~~~i~~~i~~~l~~lH 175 (494)
+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|++|.+.-.-...+ .+....+..++.|| +
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------F 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------H
Confidence 5665555552 4444444444433 34578999999999998742210111 12233333334443 4
Q ss_pred hcCCcccccccccceeecCCC----CeEEcccCCcccCC
Q 011092 176 SKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSR 210 (494)
Q Consensus 176 ~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfgla~~~~ 210 (494)
..| ++|+|+||.||+++.++ +++++|||++....
T Consensus 278 ~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 RDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred hCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 578 99999999999999888 99999999986543
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2e-12 Score=129.57 Aligned_cols=168 Identities=15% Similarity=0.191 Sum_probs=129.5
Q ss_pred EEE-EE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCCHHHHhcccCCC
Q 011092 76 VYK-GK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH 153 (494)
Q Consensus 76 Vy~-~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~ 153 (494)
+|. |. ..++.+|.|...+.....-.....+-++-|+.++||||++++..++..+..|||+|-+ ..|..++..
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~---- 100 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE---- 100 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH----
Confidence 443 44 5568899999988766422345677888999999999999999999999999999999 478888853
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCc----cccCCCcCCCcCCCC
Q 011092 154 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS----YSTNLAFTPPEYLRT 229 (494)
Q Consensus 154 ~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~t~~y~aPE~~~~ 229 (494)
++...+.-.+.||+.||.|||..+.++|++|.-+.|+++..|..||++|-++........ ..--..|..|+.+..
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 345666677899999999999766699999999999999999999999988765433221 111234566655432
Q ss_pred CCCCCCCCchhHHHHHHHHHhCC
Q 011092 230 GRVTPESVIYSFGTLLLDLLSGK 252 (494)
Q Consensus 230 ~~~~~~sDv~slG~vl~elltg~ 252 (494)
. +-..|.|.||++++|++.|.
T Consensus 180 s--~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 180 S--EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred c--ccchhhhhHHHHHHHHhCcc
Confidence 1 13569999999999999994
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.3e-12 Score=113.02 Aligned_cols=137 Identities=11% Similarity=0.147 Sum_probs=100.3
Q ss_pred ccCCCCCCCeEEEEEEcC-------CCEEEEEEecCCCC---------------------CC-hHHHH----HHHHHHhc
Q 011092 66 SEHGEKAPNVVYKGKLEN-------QRRIAVKRFNRMAW---------------------PD-PRQFL----EEARSVGQ 112 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~~----~E~~~l~~ 112 (494)
+.||.|--+.||.|...+ +..+|||+.+.... .+ .+.+. +|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 567999999999998543 47999998843110 01 11233 79999999
Q ss_pred cC--CCCCccEEEEEecCCccceeeecCCCCCHHH-HhcccCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCccccccccc
Q 011092 113 LR--NNRLTNLLGCCCEGDERLLVAEYMPNETLAK-HLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAY 188 (494)
Q Consensus 113 l~--hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~l-H~~~~ivH~Dlkp~ 188 (494)
+. .-+++.++++ ..-+|||||+.+..+.. .+. ...++......+..+++.+|..| |..+ +||+||++.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHH
Confidence 94 3567777765 34589999997643322 221 22355566778889999999999 8888 999999999
Q ss_pred ceeecCCCCeEEcccCCcccCCC
Q 011092 189 RILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 189 Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
|||++ ++.+.|+|||.+.....
T Consensus 155 NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred HEEEE-CCcEEEEECCCceeCCC
Confidence 99997 46799999998876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.6e-12 Score=117.53 Aligned_cols=108 Identities=25% Similarity=0.296 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
..|..+...|+.||+.++|..|+.+|+++|... |+-++.+|.|||+|...+|+|..||.||.+|+.++|++.+||++
T Consensus 79 E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R 158 (390)
T KOG0551|consen 79 EQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIR 158 (390)
T ss_pred HHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 478999999999999999999999999999874 44578899999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
-+.|++++.++++|..+.+..+.++.+...+
T Consensus 159 ~Akc~~eLe~~~~a~nw~ee~~~~d~e~K~~ 189 (390)
T KOG0551|consen 159 GAKCLLELERFAEAVNWCEEGLQIDDEAKKA 189 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 9999999999999999999999888776543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.8e-13 Score=134.34 Aligned_cols=240 Identities=15% Similarity=0.097 Sum_probs=175.0
Q ss_pred cccccCCCCCCCeEEEEEEc--CCCEEEEEEecCCCCCChHH--HHHHHHHHhcc-CCCCCccEEEEEecCCccceeeec
Q 011092 63 NIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMAWPDPRQ--FLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..+..||.|.|+.|+....+ ++..|++|.+.........+ -+.|+.+...+ .|.+++..+..|...+..++--||
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEF 347 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhh
Confidence 45667799999999998843 57899999987654333222 24567666666 699999999989888888999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCCCC--Cc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG--KS 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~--~~ 214 (494)
|.++++..... -...+++..++++..|++.++.++|++. ++|+|+||+||++..+ +.-+++|||+.....-. ..
T Consensus 348 ~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~ 424 (524)
T KOG0601|consen 348 CEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVF 424 (524)
T ss_pred hcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceecccc
Confidence 99998877663 3456788889999999999999999998 9999999999999875 88899999988642211 12
Q ss_pred cccCCCc-CCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAF-TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y-~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..++..| .++.......+..+.|++|||..+.+.+++....+. ..... .+..... ...+ .....+..+..
T Consensus 425 ~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-~~~~~------~i~~~~~-p~~~-~~~~~~q~~~k 495 (524)
T KOG0601|consen 425 HHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-GVQSL------TIRSGDT-PNLP-GLKLQLQVLLK 495 (524)
T ss_pred cccccccccchhhccccccccccccccccccccccccCcccCcc-cccce------eeecccc-cCCC-chHHhhhhhhh
Confidence 2223334 255555566788899999999999999999854322 11110 0100000 0111 22367888999
Q ss_pred HHccCCCCCCCChHHHHHHhc
Q 011092 294 RCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.+...++..||.+.++....+
T Consensus 496 v~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 496 VMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred hhcCCccccchhhhhhcccch
Confidence 999999999999888765443
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=134.96 Aligned_cols=105 Identities=23% Similarity=0.346 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
+...+..++.+|+.+++.|+|++|++.|++||+++|+ +.+|.|+|.||.++|++++|+.+|++||+++|++.++|+++
T Consensus 123 ~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~ 200 (615)
T TIGR00990 123 RKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRR 200 (615)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3456788999999999999999999999999999997 57899999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
|.+|..+|++++|+.+|..++.+++.+
T Consensus 201 a~a~~~lg~~~eA~~~~~~~~~~~~~~ 227 (615)
T TIGR00990 201 ANAYDGLGKYADALLDLTASCIIDGFR 227 (615)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 999999999999999998887776543
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-12 Score=95.46 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=45.9
Q ss_pred cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCC-ChHHHHHHHHHhhcccc
Q 011092 419 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEA 485 (494)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~ 485 (494)
++..|.++|.++..+|+|++|+..|++||+++|+++.+|+++|.++..+| ++++|+++|++|+++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 45566666666666677777777777777777777777777777777766 56777777777766665
|
... |
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-12 Score=113.88 Aligned_cols=103 Identities=24% Similarity=0.307 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..+...|+.+|..+.|..|+.+|.+||.++|. .+.+|.|++.||+++++++.+..++.+|++++|+.++++|.+|.+
T Consensus 9 ~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~ 87 (284)
T KOG4642|consen 9 SAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQW 87 (284)
T ss_pred HHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
++....|++|+..+.+|..+-...
T Consensus 88 ~l~s~~~~eaI~~Lqra~sl~r~~ 111 (284)
T KOG4642|consen 88 LLQSKGYDEAIKVLQRAYSLLREQ 111 (284)
T ss_pred HHhhccccHHHHHHHHHHHHHhcC
Confidence 999999999999999997765443
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.2e-12 Score=117.28 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
....+++..++.|..++..|+|..|+..|-.|++.||+ +..+++.||.+|..+|+-..|+.|++++|++.|++..|...
T Consensus 33 ~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQ 111 (504)
T KOG0624|consen 33 ASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQ 111 (504)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHH
Confidence 34567889999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+|.+++++|++++|..+|++.|.-+|.+..
T Consensus 112 Rg~vllK~Gele~A~~DF~~vl~~~~s~~~ 141 (504)
T KOG0624|consen 112 RGVVLLKQGELEQAEADFDQVLQHEPSNGL 141 (504)
T ss_pred hchhhhhcccHHHHHHHHHHHHhcCCCcch
Confidence 999999999999999999999999996653
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-12 Score=94.88 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC-ChHHHHHHHHHHHhhCC
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISP 451 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p 451 (494)
++..|...|..++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+| ++++|+.++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 4778999999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=107.57 Aligned_cols=106 Identities=12% Similarity=-0.013 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh--CCcchHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--SPIWHIASYLQ 460 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~~~~ 460 (494)
....+|..++..|.+.|+.+.|-+.|++|+.++|+ +.++++|-|.-+..+|+|++|...|++|+.. .|.-+..|-|+
T Consensus 67 s~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~ 145 (250)
T COG3063 67 SYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENL 145 (250)
T ss_pred ccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhh
Confidence 33444444444444445555555555555555544 4444444444444444555555555544432 12224445555
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
|.|-++.|+++.|.++|+++|++||.+..
T Consensus 146 G~Cal~~gq~~~A~~~l~raL~~dp~~~~ 174 (250)
T COG3063 146 GLCALKAGQFDQAEEYLKRALELDPQFPP 174 (250)
T ss_pred HHHHhhcCCchhHHHHHHHHHHhCcCCCh
Confidence 55555555555555555555555555443
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.7e-13 Score=128.30 Aligned_cols=108 Identities=21% Similarity=0.281 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..+..+|+.++..++|+.|+..|.+||+++|+ .+.+|.+|+.++.+.++|..|+.|+.+||+++|++.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhccccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
.+.++++.+|+.+|+....+.|.+..+.+
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r 110 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATR 110 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHH
Confidence 99999999999999999999999887654
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.3e-11 Score=96.21 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc----hHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----HIA 456 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~----~~a 456 (494)
..+....+-.+|..+...|+.+.|++.|.+||.+.|. ++.+|+||+.+|..+|+.++|+.++++|+++.-+. -.+
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 3455667788899999999999999999999999999 99999999999999999999999999999997554 357
Q ss_pred HHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 457 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 457 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
|..+|.+|..+|+-+.|..+|+.|.++..+.+
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~FA 149 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGSKFA 149 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCCHHH
Confidence 99999999999999999999999999876654
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.7e-11 Score=100.74 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc---hHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYL 459 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~ 459 (494)
+..++..|..+++.|+|++|++.|+++++.+|++ ...+++.+|.++.+.|++++|+..+++++..+|++ +.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPKSTYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 4578999999999999999999999999999872 25688999999999999999999999999999986 678999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|.++..+|++++|+..|+++++..|++..+
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 9999999999999999999999999987654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.30 E-value=2e-11 Score=129.71 Aligned_cols=106 Identities=15% Similarity=0.080 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..+..+|..++..|++++|+..|+++|+++|+ ....|.++|.++..+|++++|+..++++++++|+++.+|+.+|.
T Consensus 329 ~~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~ 407 (615)
T TIGR00990 329 KEAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQ 407 (615)
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45566777777777777777777777777777777 66677777777777777777777777777777777777777777
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+++.+|++++|+.+|+++++++|++..
T Consensus 408 ~~~~~g~~~~A~~~~~kal~l~P~~~~ 434 (615)
T TIGR00990 408 LHFIKGEFAQAGKDYQKSIDLDPDFIF 434 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHcCccCHH
Confidence 777777777777777777777776544
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.1e-11 Score=94.00 Aligned_cols=99 Identities=20% Similarity=0.249 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 466 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 466 (494)
.++.+|..++..|++++|+..|+++++..|. +..++..+|.++...+++++|+..+++++.+.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 4788999999999999999999999999999 778999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccc
Q 011092 467 MGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 467 ~~~~~~A~~~~~~al~l~~~ 486 (494)
.|++++|...+.++++++|.
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999998874
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.7e-11 Score=105.16 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
.....+..++.+|..+...|+|++|+.+|++|+++.|+. ...++.++|.+|..+|++++|+..+++|++++|++..++
T Consensus 30 ~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 109 (172)
T PRK02603 30 KKAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSAL 109 (172)
T ss_pred cHhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHH
Confidence 345678899999999999999999999999999987762 246899999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCC--------------hHHHHHHHHHhhccccccc
Q 011092 458 YLQAAALSAMGM--------------ENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 458 ~~~g~~~~~~~~--------------~~~A~~~~~~al~l~~~~~ 488 (494)
..+|.++..+|+ +++|++.++++++++|.+-
T Consensus 110 ~~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 110 NNIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 999999999998 6889999999999998864
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.4e-12 Score=95.71 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=75.3
Q ss_pred HhcCHHHHHHHHHHHHhcCCCC-cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHH
Q 011092 397 RQKDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 475 (494)
Q Consensus 397 ~~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 475 (494)
.+|+|++|+..|+++++.+|.+ +..+++++|.||..+|+|++|+..+++ ++.+|.++..++.+|.++..+|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3689999999999999999963 567788899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHh
Q 011092 476 ALKEG 480 (494)
Q Consensus 476 ~~~~a 480 (494)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99976
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-12 Score=127.20 Aligned_cols=104 Identities=14% Similarity=0.096 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..++.|...|+.+--+++++.||++|.+||++||+ .+=+|...|.=+.....||+|...|++||..+|++..|||.+|.
T Consensus 419 ~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~ 497 (638)
T KOG1126|consen 419 NSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGT 497 (638)
T ss_pred CCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhh
Confidence 34566777777777777777777777777777776 44444444455555555555555555555555555555555555
Q ss_pred HHHHCCChHHHHHHHHHhhcccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+|+++++++.|.-.|++|++++|.+
T Consensus 498 vy~Kqek~e~Ae~~fqkA~~INP~n 522 (638)
T KOG1126|consen 498 VYLKQEKLEFAEFHFQKAVEINPSN 522 (638)
T ss_pred heeccchhhHHHHHHHhhhcCCccc
Confidence 5555555555555555555555544
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.2e-11 Score=113.78 Aligned_cols=121 Identities=9% Similarity=-0.038 Sum_probs=108.8
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCCh--HHHHHHHHHHHh
Q 011092 372 ELSFQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP--QDALNDAMQAQI 448 (494)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~--~~A~~~~~~al~ 448 (494)
....+...-...+..+|..+|..+...| ++++|+..++++|+.+|+ +..+|++|+.++.++++. ++++..++++|+
T Consensus 58 ~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~ 136 (320)
T PLN02789 58 DLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILS 136 (320)
T ss_pred HHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHH
Confidence 3334445556678889999999999998 689999999999999999 899999999999999874 789999999999
Q ss_pred hCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccccC
Q 011092 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 493 (494)
Q Consensus 449 l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~~ 493 (494)
++|++..||+.+|.++..+|++++|++++.++|++||.+.+|+.+
T Consensus 137 ~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~~ 181 (320)
T PLN02789 137 LDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWNQ 181 (320)
T ss_pred hCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHHH
Confidence 999999999999999999999999999999999999999988643
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.1e-11 Score=111.10 Aligned_cols=140 Identities=18% Similarity=0.183 Sum_probs=108.5
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCC--CCCccEEEEEecCC---ccceeeecCC
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRN--NRLTNLLGCCCEGD---ERLLVAEYMP 139 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~~---~~~lv~e~~~ 139 (494)
..++.|..+.||++...+|..+++|....... .....+..|++++..+.+ .++++++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 35688999999999986678999999865432 134578899999999965 45677888876643 5689999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK------------------------------------------ 177 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~------------------------------------------ 177 (494)
|.+|.+.+. ...++......++.+++.+|..||+.
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998877552 13567777778888888888888841
Q ss_pred -------------CCcccccccccceeecC--CCCeEEcccCCccc
Q 011092 178 -------------GRALYHDLNAYRILFDE--DGNPRLSTFGLMKN 208 (494)
Q Consensus 178 -------------~~ivH~Dlkp~Nill~~--~~~~kl~Dfgla~~ 208 (494)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 01689999999999998 56689999998754
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.8e-11 Score=101.32 Aligned_cols=131 Identities=19% Similarity=0.191 Sum_probs=97.9
Q ss_pred cCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--------hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 67 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.++.|+-+.+|.+.+. |..+++|.=.+..-.. ..+-.+|+.++.+++--.|....=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 3578999999999763 3446666532221111 235678999999997656655555556667778999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
+|..|.+.+... ...++..|-.-+.-||..| |+|+||.++||++...+ +.++||||+...
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999999888531 2556777777888899999 99999999999998665 999999998643
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-11 Score=106.86 Aligned_cols=111 Identities=19% Similarity=0.160 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--------cCCCC---------cHHHHhHHHHHHHhcCChHHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID--------AGTMV---------SPTVYARRSLCYLMSDMPQDALND 442 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------~~p~~---------~~~~~~~~~~~~~~~~~~~~A~~~ 442 (494)
++++....+.+.|+.+|+.|+|.+|...|..||. ..|.. ...++.|.+.|+...|+|-++++.
T Consensus 173 eKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh 252 (329)
T KOG0545|consen 173 EKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEH 252 (329)
T ss_pred HhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHH
Confidence 6788899999999999999999999999999983 24441 235689999999999999999999
Q ss_pred HHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 443 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 443 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+...|...|++.+|||++|.+...--+.++|.++|.++|+++|..+.+
T Consensus 253 ~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpslasv 300 (329)
T KOG0545|consen 253 CSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLASV 300 (329)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhHHH
Confidence 999999999999999999999999999999999999999999987653
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.6e-12 Score=134.09 Aligned_cols=243 Identities=17% Similarity=0.127 Sum_probs=172.1
Q ss_pred CccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++...+++-+-+|+++.++.+. -..|...++|+..... ..+.+...++-.++-..+||-++...-.+......+|+
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 4445566677899999999887 3345455555543221 11222333343344344556666655555556778999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC----
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR---- 210 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 210 (494)
++|..|++|...++. ..+.+.+-....+..+..++++||+.. ++|+|++|.|+|+..++..++.|||......
T Consensus 883 ~~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhhc--CCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccccC
Confidence 999999999998873 345666666677778889999999987 8999999999999999999999998432110
Q ss_pred ---C----------------------------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch
Q 011092 211 ---D----------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259 (494)
Q Consensus 211 ---~----------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~ 259 (494)
. .....+|+.|.+||...+......+|+|++|++++|.++|..||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 011246789999999999999999999999999999999998887655
Q ss_pred hHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChH
Q 011092 260 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307 (494)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 307 (494)
...+.+...... .....-+...+.+..+++...+..+|.+|..+.
T Consensus 1040 pq~~f~ni~~~~---~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1040 PQQIFENILNRD---IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhccccCC---CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 443333222221 112233445567899999999999999996655
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.2e-11 Score=129.38 Aligned_cols=104 Identities=7% Similarity=-0.140 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
+..+...|..+.+.|++++|+..|++|++++|+ ++.+++++|.++..+|++++|+..+++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhcccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
..+|++++|+.+|++|++++|++..
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a~ 712 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQAL 712 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCch
Confidence 9999999999999999999998764
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.5e-11 Score=100.46 Aligned_cols=142 Identities=16% Similarity=0.157 Sum_probs=104.1
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC--------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..+-+|+-+.|+++.+ .|+.+.||.=...... ...+..+|+.+|.++.--.|.-..-++.+...-.|+|||
T Consensus 13 ~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 3446788889999998 4667677753221111 135678899999999766665555556666667899999
Q ss_pred CCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC---eEEcccCCcccC
Q 011092 138 MPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNS 209 (494)
Q Consensus 138 ~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgla~~~ 209 (494)
++| .++.+++...............++..|-..+.-||.++ ++|+||..+||++..++. +.++|||++...
T Consensus 92 ~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 92 IDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred ccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 986 47888886544344444444788899999999999999 999999999999975543 589999997543
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.1e-11 Score=113.39 Aligned_cols=99 Identities=11% Similarity=0.017 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..|+.+|..+...|+|++|+..|++|++++|+ +..+|.++|.++...|++++|+++|+++++++|+++......
T Consensus 94 ~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~g~~~eA~~~~~~al~~~P~~~~~~~~~ 172 (296)
T PRK11189 94 RPDMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAYLNRGIALYYGGRYELAQDDLLAFYQDDPNDPYRALWL 172 (296)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3456788899999999999999999999999999999 788889999999999999999999999888888765211111
Q ss_pred HHHHHHCCChHHHHHHHHHhh
Q 011092 461 AAALSAMGMENEAQVALKEGT 481 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al 481 (494)
..+...+++++|+..|++++
T Consensus 173 -~l~~~~~~~~~A~~~l~~~~ 192 (296)
T PRK11189 173 -YLAESKLDPKQAKENLKQRY 192 (296)
T ss_pred -HHHHccCCHHHHHHHHHHHH
Confidence 11223445555555554443
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.4e-10 Score=112.97 Aligned_cols=215 Identities=19% Similarity=0.181 Sum_probs=154.3
Q ss_pred CCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec----CCccceeeecCCC-CCHHHH
Q 011092 73 PNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLVAEYMPN-ETLAKH 146 (494)
Q Consensus 73 ~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~ 146 (494)
..+.|++. .-+|..|++|++.............-+++++++.|+|||++.+++.. +..+++||+|.|+ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35789998 55799999999965544444344566889999999999999999873 3458899999995 567665
Q ss_pred hccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 147 LFHW-------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 147 l~~~-------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
.... .+...++..+|.++.|+..||.++|+.| +..+-|.|.+||++.+.+++|+..|+.-......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence 4321 1234678899999999999999999999 9999999999999999999998888755443322
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
. +.+. --.+-|.=.||.+++-|.||..--... +...... ...+....+.++++++.
T Consensus 448 --------~--~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~--d~~~~s~---------~~~I~~~yS~D~rn~v~ 503 (655)
T KOG3741|consen 448 --------T--EPLE---SQQQNDLRDLGLLLLALATGTENSNRT--DSTQSSH---------LTRITTTYSTDLRNVVE 503 (655)
T ss_pred --------C--cchh---HHhhhhHHHHHHHHHHHhhcccccccc--cchHHHH---------HHHhhhhhhHHHHHHHH
Confidence 0 1111 123678899999999999996421110 0011110 11223345678999999
Q ss_pred HHccCCCCCCCChHHHHHHh
Q 011092 294 RCLQYEPRERPNPKSLVTAL 313 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L 313 (494)
.....++++ -+..+++.++
T Consensus 504 yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 504 YLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHhcCccc-ccHHHHHHHH
Confidence 999999887 5677777654
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-10 Score=101.14 Aligned_cols=108 Identities=16% Similarity=0.080 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
....+..++..|..+...|+|++|+..|.+|+.+.|+. ...++.++|.+|..+|++++|+..+++|++++|.+..+++
T Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~ 110 (168)
T CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALN 110 (168)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 44578899999999999999999999999999887652 2458999999999999999999999999999999999999
Q ss_pred HHHHHHH-------HCCChH-------HHHHHHHHhhccccccc
Q 011092 459 LQAAALS-------AMGMEN-------EAQVALKEGTTLEAKKN 488 (494)
Q Consensus 459 ~~g~~~~-------~~~~~~-------~A~~~~~~al~l~~~~~ 488 (494)
++|.++. .+|+++ +|+..|++++.++|.+.
T Consensus 111 ~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~~ 154 (168)
T CHL00033 111 NMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGNY 154 (168)
T ss_pred HHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCcccH
Confidence 9999999 777766 66666677888888654
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7e-11 Score=123.50 Aligned_cols=88 Identities=18% Similarity=0.093 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHH
Q 011092 400 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479 (494)
Q Consensus 400 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 479 (494)
++++|+..+++|++++|+ ++.++..+|.++...|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|++
T Consensus 319 ~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~~ 397 (553)
T PRK12370 319 AMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINE 397 (553)
T ss_pred HHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 356666666666666666 5566666666666666666666666666666666666666666666666666666666666
Q ss_pred hhccccccc
Q 011092 480 GTTLEAKKN 488 (494)
Q Consensus 480 al~l~~~~~ 488 (494)
|++++|.+.
T Consensus 398 Al~l~P~~~ 406 (553)
T PRK12370 398 CLKLDPTRA 406 (553)
T ss_pred HHhcCCCCh
Confidence 666666543
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.9e-11 Score=115.10 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.-++++.-+|..++-.|++-.|-..|+++|.++|. +...|..++.+|...++-++-..+|++|..+||.++..||.||.
T Consensus 324 ~~A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQ 402 (606)
T KOG0547|consen 324 YMAEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQ 402 (606)
T ss_pred HHHHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHH
Confidence 34788999999999999999999999999999999 77779999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+++-+++|++|+.+|++|++|+|++.-+.
T Consensus 403 m~flL~q~e~A~aDF~Kai~L~pe~~~~~ 431 (606)
T KOG0547|consen 403 MRFLLQQYEEAIADFQKAISLDPENAYAY 431 (606)
T ss_pred HHHHHHHHHHHHHHHHHHhhcChhhhHHH
Confidence 99999999999999999999999987554
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.3e-10 Score=97.64 Aligned_cols=99 Identities=9% Similarity=-0.065 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.+.+..+..|..+|++|+|++|...|.-....+|. ++.++..+|.|+..+++|++|+..|..|..++++++..+|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 45678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhc
Q 011092 463 ALSAMGMENEAQVALKEGTT 482 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~ 482 (494)
||+.+|+.++|+.+|..|++
T Consensus 114 C~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999998
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-10 Score=99.42 Aligned_cols=89 Identities=16% Similarity=0.020 Sum_probs=82.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.....+...+..+|.++...|+|++|+..|++|++++|+ ++.+++++|.++..+|++++|+..|++|++++|+++.++.
T Consensus 52 ~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~ 130 (144)
T PRK15359 52 MAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSE 130 (144)
T ss_pred HcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 344567889999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCC
Q 011092 459 LQAAALSAMG 468 (494)
Q Consensus 459 ~~g~~~~~~~ 468 (494)
++|.+...++
T Consensus 131 ~~~~~~~~l~ 140 (144)
T PRK15359 131 IRQNAQIMVD 140 (144)
T ss_pred HHHHHHHHHH
Confidence 9999876553
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.3e-10 Score=105.29 Aligned_cols=132 Identities=13% Similarity=0.128 Sum_probs=98.8
Q ss_pred eEEEEEEcCCCEEEEEEecCCCCC-----------ChHHHHHHHHHHhccCCCC--CccEEEEEecC-----Cccceeee
Q 011092 75 VVYKGKLENQRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNR--LTNLLGCCCEG-----DERLLVAE 136 (494)
Q Consensus 75 ~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~~~-----~~~~lv~e 136 (494)
.|++..+ +|+.|.||......+. ....+.+|...+.+|..-+ ++.++++.... ...+||||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667666 5678999977543321 1124789999999995434 44555565431 24689999
Q ss_pred cCCCC-CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-------CCCeEEcccCCccc
Q 011092 137 YMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------DGNPRLSTFGLMKN 208 (494)
Q Consensus 137 ~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-------~~~~kl~Dfgla~~ 208 (494)
++++. +|.+++......+.+......++.+++..+.-||..| |+|+|+++.|||++. ++.+.|+||+.+..
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99975 8999885433345667778899999999999999999 999999999999975 46799999998753
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-11 Score=119.96 Aligned_cols=106 Identities=10% Similarity=0.075 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+.+|--.|..+....+||.|..+|++||..+|+ ...+|+.+|.+|.++++++.|.-.|++|+++||.+......+|..
T Consensus 454 faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~ 532 (638)
T KOG1126|consen 454 FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRI 532 (638)
T ss_pred cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHH
Confidence 3455555666666666666666666666666666 556666666666666666666666666666666666666666666
Q ss_pred HHHCCChHHHHHHHHHhhccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+.++|+.|+|+..|++|+.+||++...
T Consensus 533 ~~~~k~~d~AL~~~~~A~~ld~kn~l~ 559 (638)
T KOG1126|consen 533 QHQLKRKDKALQLYEKAIHLDPKNPLC 559 (638)
T ss_pred HHHhhhhhHHHHHHHHHHhcCCCCchh
Confidence 666666666666666666666665543
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.7e-10 Score=108.80 Aligned_cols=105 Identities=16% Similarity=0.050 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
.+-..+|.-.|..|...++-..|++.|++|++++|. +..+|+.+|.+|..++.+-=|+-.|++|+++.|.+...|.-+|
T Consensus 361 p~~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~-DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~~kPnDsRlw~aLG 439 (559)
T KOG1155|consen 361 PKYLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPR-DYRAWYGLGQAYEIMKMHFYALYYFQKALELKPNDSRLWVALG 439 (559)
T ss_pred cchhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCch-hHHHHhhhhHHHHHhcchHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 456778888999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHhhcccccc
Q 011092 462 AALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 462 ~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
.||.++++.++|+++|++|+...-.+
T Consensus 440 ~CY~kl~~~~eAiKCykrai~~~dte 465 (559)
T KOG1155|consen 440 ECYEKLNRLEEAIKCYKRAILLGDTE 465 (559)
T ss_pred HHHHHhccHHHHHHHHHHHHhccccc
Confidence 99999999999999999999887654
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-10 Score=118.35 Aligned_cols=110 Identities=5% Similarity=-0.085 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
..+.++.++..+|....+.|.|++|...++.+++++|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++.
T Consensus 81 ~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~ 159 (694)
T PRK15179 81 RYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILL 159 (694)
T ss_pred hccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 34566777777777777777777777777777777777 77777777777777777777777777777777777777777
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|.++.++|+|++|+..|+++++.+|.+.++
T Consensus 160 ~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~ 190 (694)
T PRK15179 160 EAKSWDEIGQSEQADACFERLSRQHPEFENG 190 (694)
T ss_pred HHHHHHHhcchHHHHHHHHHHHhcCCCcHHH
Confidence 7777777777777777777777766665543
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-10 Score=119.46 Aligned_cols=107 Identities=9% Similarity=-0.056 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...++..+..+|..+...|++++|+..|++|++++|+ ++.+++++|.+|..+|++++|+..+++|++++|.++.+++.+
T Consensus 334 dP~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~ 412 (553)
T PRK12370 334 DHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITK 412 (553)
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHH
Confidence 3456777888888888888899999999999988888 888888888888888888889999999988888888887777
Q ss_pred HHHHHHCCChHHHHHHHHHhhccc-cccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLE-AKKN 488 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~-~~~~ 488 (494)
+.+++.+|++++|+..++++++.+ |.+.
T Consensus 413 ~~~~~~~g~~eeA~~~~~~~l~~~~p~~~ 441 (553)
T PRK12370 413 LWITYYHTGIDDAIRLGDELRSQHLQDNP 441 (553)
T ss_pred HHHHHhccCHHHHHHHHHHHHHhccccCH
Confidence 777888888888888888888765 4443
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.9e-10 Score=100.32 Aligned_cols=126 Identities=17% Similarity=0.205 Sum_probs=83.9
Q ss_pred EEEEEEcCCCEEEEEEecCCCCC---------------------C-----hHHHHHHHHHHhccCCC--CCccEEEEEec
Q 011092 76 VYKGKLENQRRIAVKRFNRMAWP---------------------D-----PRQFLEEARSVGQLRNN--RLTNLLGCCCE 127 (494)
Q Consensus 76 Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~hp--nIv~l~~~~~~ 127 (494)
||.|...+|..||||..+..... . .....+|.+.|.++..- ++++++++.
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-- 79 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-- 79 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--
T ss_pred EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--
Confidence 89999888999999998542111 0 12356899999999655 567777553
Q ss_pred CCccceeeecCC--CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCcccccccccceeecCCCCeEEcccC
Q 011092 128 GDERLLVAEYMP--NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY-CTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204 (494)
Q Consensus 128 ~~~~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~-lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 204 (494)
...|||||++ |..+..+.. ..++......++.+++..+.. +|..| ++|+||.+.|||++++ .+.++|||
T Consensus 80 --~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~iIDf~ 151 (188)
T PF01163_consen 80 --RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVYIIDFG 151 (188)
T ss_dssp --TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEEE--GT
T ss_pred --CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEEEEecC
Confidence 3479999998 655554332 112234456677788775555 57888 9999999999999987 89999999
Q ss_pred CcccCCC
Q 011092 205 LMKNSRD 211 (494)
Q Consensus 205 la~~~~~ 211 (494)
.+.....
T Consensus 152 qav~~~~ 158 (188)
T PF01163_consen 152 QAVDSSH 158 (188)
T ss_dssp TEEETTS
T ss_pred cceecCC
Confidence 8876543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-09 Score=100.97 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC--CcchHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PIWHIASYL 459 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--p~~~~a~~~ 459 (494)
......+...|..++..|++++|++.|+++++.+|. +..++.+.+.+|...|++++|+..+++++... |.....+++
T Consensus 62 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~ 140 (234)
T TIGR02521 62 PDDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLEN 140 (234)
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHH
Confidence 355678888999999999999999999999999998 78889999999999999999999999998864 566788999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+|.++...|++++|...|+++++++|.+..
T Consensus 141 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 170 (234)
T TIGR02521 141 AGLCALKAGDFDKAEKYLTRALQIDPQRPE 170 (234)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcCChH
Confidence 999999999999999999999999887654
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.3e-10 Score=103.95 Aligned_cols=107 Identities=17% Similarity=0.103 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH---HHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH---H
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---A 456 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~---a 456 (494)
..+..++.+|..++..|+|++|+..|++++..+|+ ++ .+++.+|.+|..+|++++|+..++++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 34668899999999999999999999999999998 54 57899999999999999999999999999998877 7
Q ss_pred HHHHHHHHHHC--------CChHHHHHHHHHhhccccccccc
Q 011092 457 SYLQAAALSAM--------GMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 457 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~~~~~~a 490 (494)
++.+|.++..+ |++++|++.|+++++.+|++..+
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 151 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYA 151 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhH
Confidence 99999999987 89999999999999999998643
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.1e-10 Score=98.60 Aligned_cols=99 Identities=14% Similarity=-0.013 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+.+..++|..|++.||+..|.+.+++||+.||+ +..+|.-++.+|.++|+.+.|-+.|++|+.++|++.+.++|.|-
T Consensus 33 ~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~ 111 (250)
T COG3063 33 EAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGA 111 (250)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhc
Q 011092 463 ALSAMGMENEAQVALKEGTT 482 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~ 482 (494)
-++.+|+|++|...|++|+.
T Consensus 112 FLC~qg~~~eA~q~F~~Al~ 131 (250)
T COG3063 112 FLCAQGRPEEAMQQFERALA 131 (250)
T ss_pred HHHhCCChHHHHHHHHHHHh
Confidence 99999999999999999985
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.5e-10 Score=82.00 Aligned_cols=62 Identities=19% Similarity=0.087 Sum_probs=32.9
Q ss_pred HHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 426 RSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 426 ~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+|..+...|++++|+..|+++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 3 ~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 3 LARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 44455555555555555555555555555555555555555555555555555555555543
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-10 Score=100.09 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=87.9
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH-HHCCC--hHHH
Q 011092 397 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL-SAMGM--ENEA 473 (494)
Q Consensus 397 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~-~~~~~--~~~A 473 (494)
..++.++++..+.++++.+|+ +...|.++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 368889999999999999999 9999999999999999999999999999999999999999999985 67787 5999
Q ss_pred HHHHHHhhcccccccccc
Q 011092 474 QVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 474 ~~~~~~al~l~~~~~~a~ 491 (494)
.+.|+++++++|++..+.
T Consensus 130 ~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 130 REMIDKALALDANEVTAL 147 (198)
T ss_pred HHHHHHHHHhCCCChhHH
Confidence 999999999999987653
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.2e-10 Score=83.10 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch
Q 011092 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 389 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 454 (494)
+.+|..+++.|+|++|++.|+++++.+|+ +..+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 46899999999999999999999999999 999999999999999999999999999999999985
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 494 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 8e-25 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 8e-25 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-23 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-22 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-22 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-20 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 9e-20 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-19 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-13 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-13 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-13 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-13 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-13 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-13 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-13 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-12 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-12 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-12 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 2e-11 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-11 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 2e-11 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-11 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-11 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 4e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 5e-11 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 7e-11 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 8e-11 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 8e-11 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 8e-11 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 9e-11 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-10 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-10 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 1e-10 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 2e-10 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-10 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-10 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-10 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-10 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-10 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 2e-10 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-10 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-10 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 3e-10 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-10 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-10 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-10 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-10 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 3e-10 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 4e-10 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 4e-10 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-10 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 4e-10 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-10 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-10 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 4e-10 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 4e-10 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 5e-10 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 5e-10 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 5e-10 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 5e-10 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 6e-10 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 7e-10 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-10 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 8e-10 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-10 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 9e-10 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-09 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 1e-09 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-09 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-09 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-09 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-09 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 2e-09 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-09 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-09 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-09 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-09 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-09 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-09 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-09 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 3e-09 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 3e-09 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-09 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 3e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 3e-09 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-09 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 3e-09 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-09 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 5e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 6e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 7e-09 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 7e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 7e-09 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 8e-09 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 8e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 8e-09 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 8e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 8e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 9e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 9e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-08 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-08 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-08 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-08 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-08 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-08 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 2e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-08 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-08 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-08 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-08 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-08 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-08 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-08 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-08 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 4e-08 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 5e-08 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 6e-08 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 7e-08 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 7e-08 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 7e-08 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 8e-08 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 1e-07 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-07 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 1e-07 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-07 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-07 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 1e-07 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 1e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-07 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-07 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 3e-07 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 4e-07 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 4e-07 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 4e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 5e-07 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-07 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 5e-07 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 5e-07 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 5e-07 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-07 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 5e-07 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-07 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 6e-07 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 6e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 6e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 6e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 6e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 6e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 6e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 7e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 7e-07 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 7e-07 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 8e-07 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 8e-07 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 9e-07 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 9e-07 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 9e-07 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 9e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-06 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-06 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-06 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-06 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-06 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-06 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-06 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-06 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-06 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-06 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-06 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-06 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-06 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-06 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-06 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-06 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-06 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-06 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-06 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-06 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-06 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 3e-06 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 3e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-06 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-06 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-06 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-06 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-06 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 3e-06 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 3e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-06 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 4e-06 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 4e-06 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-06 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 4e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-06 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 5e-06 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 5e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 5e-06 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 5e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 6e-06 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 6e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 7e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 7e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 7e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-06 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 7e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 7e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 7e-06 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 8e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 8e-06 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 9e-06 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 1e-05 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 1e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-05 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 1e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-05 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 1e-05 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-05 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 1e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 1e-05 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-05 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 2e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 2e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 2e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-05 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 3e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 3e-05 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-05 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 4e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 4e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 4e-05 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 4e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 4e-05 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-05 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 4e-05 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-05 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 4e-05 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 4e-05 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 4e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 5e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 6e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 6e-05 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 7e-05 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 7e-05 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 9e-05 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 9e-05 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 1e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 1e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 2e-04 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 2e-04 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-04 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-04 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 3e-04 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 3e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-04 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 3e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 3e-04 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-04 | ||
| 1elw_A | 118 | Crystal Structure Of The Tpr1 Domain Of Hop In Comp | 4e-04 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 4e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 4e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 5e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 5e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-04 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 5e-04 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 6e-04 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 6e-04 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 6e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 6e-04 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 6e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 7e-04 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-04 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 8e-04 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-04 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 8e-04 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 9e-04 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex With A Hsc70 Peptide Length = 118 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 9e-62
Identities = 85/317 (26%), Positives = 142/317 (44%), Gaps = 42/317 (13%)
Query: 31 ENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEH---GEKAPNVVYKGKLENQRRI 87
EN + D F F+ +LKN T+ F I GE VVYKG + N +
Sbjct: 1 ENKSLEVSDT--RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-V 57
Query: 88 AVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 143
AVK+ M +QF +E + + + ++ L LLG +GD+ LV YMPN +L
Sbjct: 58 AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
Query: 144 AKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR------ILFDEDG 196
L + T P+ W MR ++ A + + L+ + + +R IL DE
Sbjct: 118 LDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEAF 170
Query: 197 NPRLSTFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLS 250
++S FGL + + + ++ ++ + T PE L G +TP+S IYSFG +LL++++
Sbjct: 171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIIT 229
Query: 251 GK-----HIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G H P LD ++ ++ D + + +AS+CL +
Sbjct: 230 GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKK 288
Query: 301 RERPNPKSLVTALSPLQ 317
+RP+ K + L +
Sbjct: 289 NKRPDIKKVQQLLQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 1e-61
Identities = 88/311 (28%), Positives = 144/311 (46%), Gaps = 30/311 (9%)
Query: 26 DVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQR 85
DV A E+ E+ L + F+L +L+ A+ F+ +NI+ G VYKG+L +
Sbjct: 3 DVPAEEDPEVH----LGQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGT 55
Query: 86 RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVKR QF E + + L L G C ERLLV YM N ++A
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 145 KHLF--HWETHPMKWAMRLRVVLHLAQALEY--CTSKGRALYHDLNAYRILFDEDGNPRL 200
L P+ W R R+ L A+ L Y + ++ D+ A IL DE+ +
Sbjct: 116 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175
Query: 201 STFGLMKNSRDGKSY-STNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLSGK--- 252
FGL K ++ +T + T PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
Query: 253 --HIPP--------SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
L++++ L+ L D L+G + D++ +L+++A C Q P E
Sbjct: 236 DLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 303 RPNPKSLVTAL 313
RP +V L
Sbjct: 296 RPKMSEVVRML 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 2e-58
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 45 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFL 104
L L+ AT+ F + ++ G VYKG L + ++A+KR + +F
Sbjct: 27 YRVPLVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF--HWETHPMKWAMRLR 162
E ++ R+ L +L+G C E +E +L+ +YM N L +HL+ T M W RL
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSY-STNLA 220
+ + A+ L Y ++ D+ + IL DE+ P+++ FG+ K + +++ ST +
Sbjct: 144 ICIGAARGLHY-LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVK 202
Query: 221 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH-------ALDLIRD 265
T PEY GR+T +S +YSFG +L ++L + P A++ +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 266 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+ + D L + + + A +CL +RP+ ++ L
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-26
Identities = 51/325 (15%), Positives = 104/325 (32%), Gaps = 57/325 (17%)
Query: 43 SFREFTLEQLKNATSGFAVENIVSE--HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP 100
S + E L + + + + G V+K +L N+ +AVK F D
Sbjct: 10 SGVDLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNEY-VAVKIFP---IQDK 60
Query: 101 RQFLEEA--RSVGQLRNNRLTNLLGCCCEGD----ERLLVAEYMPNETLAKHLFHWETHP 154
+ + E S+ +++ + +G G + L+ + +L+ L +
Sbjct: 61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NV 117
Query: 155 MKWAMRLRVVLHLAQALEYCTSKGRALY--------H-DLNAYRILFDEDGNPRLSTFGL 205
+ W + +A+ L Y L H D+ + +L + ++ FGL
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 206 MKNSRDGKSYSTNLAFT------PPEYLRTGRVTPESV-----IYSFGTLLLDLLSGK-- 252
GKS PE L +Y+ G +L +L S
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237
Query: 253 --------------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT-ELVRLASRCLQ 297
I +L+ +++ + L + G L C
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297
Query: 298 YEPRERPNPKSLVTALSPLQKETEV 322
++ R + + ++ +Q+ T +
Sbjct: 298 HDAEARLSAGCVGERITQMQRLTNI 322
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-25
Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 24/258 (9%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
++KG+ + I VK W R F EE + + + +LG C
Sbjct: 25 ELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 133 L--VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
+ +MP +L L + + ++ L +A+ + + + + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV---IYSFGTLLL 246
++ DED R+S + K S A+ PE L+ ++SF LL
Sbjct: 144 VMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 247 DLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
+L++ + + + L+ + + +L C+ +P
Sbjct: 203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICMNEDPA 253
Query: 302 ERPNPKSLVTALSPLQKE 319
+RP +V L +Q +
Sbjct: 254 KRPKFDMIVPILEKMQDK 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 52/264 (19%), Positives = 109/264 (41%), Gaps = 23/264 (8%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
V++ + +AVK + +FL E + +LR+ + +G +
Sbjct: 52 TVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 133 LVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRI 190
+V EY+ +L + L + RL + +A+ + Y ++ + H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 191 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 246
L D+ ++ FGL + S + A TP PE LR +S +YSFG +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 247 DLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
+L + + ++ P+ + + + ++ + + ++ + C EP
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPW 281
Query: 302 ERPNPKSLVTALSPLQKETEVPSH 325
+RP+ +++ L PL K P +
Sbjct: 282 KRPSFATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 1e-23
Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 28/261 (10%)
Query: 76 VYKGKLENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL- 132
VYKGK +AVK N + F E + + R+ + +G +L
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
+V ++ +L HL H + + + A+ ++Y +K + H DL + I
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152
Query: 192 FDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV---IYSFG 242
ED ++ FGL K+ G L+ + PE +R P S +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 243 TLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298
+L +L++G+ +I + + R S + + + RL + CL+
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS----KVRSNCPKRMKRLMAECLKK 268
Query: 299 EPRERPNPKSLVTALSPLQKE 319
+ ERP+ ++ + L +E
Sbjct: 269 KRDERPSFPRILAEIEELARE 289
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 1e-21
Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 31/259 (11%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VV K K + +A+K+ + + F+ E R + ++ + + L G C + LV
Sbjct: 23 VVCKAKWRAKD-VAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 135 AEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYC-TSKGRALYH-DLNAYRIL 191
EY +L L E P A + L +Q + Y + + +AL H DL +L
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 192 FDEDGN-PRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 246
G ++ FG + D +++ TN + PE + + ++S+G +L
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 247 DLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
++++ + P + + + L + + + L +RC +P
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDP 245
Query: 301 RERPNPKSLVTALSPLQKE 319
+RP+ + +V ++ L +
Sbjct: 246 SQRPSMEEIVKIMTHLMRY 264
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 3e-21
Identities = 58/343 (16%), Positives = 103/343 (30%), Gaps = 68/343 (19%)
Query: 46 EFTLEQLKNATSGFAVENIVSE--HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQF 103
E + + ++ +G VYKG L+ + +AVK F+ + + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52
Query: 104 LEEAR--SVGQLRNNRLTNLLGCCCEGD-----ERLLVAEYMPNETLAKHLFHWETHPMK 156
+ E V + ++ + + E LLV EY PN +L K+L H
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109
Query: 157 WAMRLRVVLHLAQALEY-------CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL--- 205
W R+ + + L Y A+ H DLN+ +L DG +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 206 -----MKNSRDGKSYSTNLAFTP----PEYLR-------TGRVTPESVIYSFGTLLLDLL 249
+ + + + + T PE L + +Y+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 250 SGKHI-----------PPSHALDLIRDRNLQMLTDSCLEGQ-------FTDDDGT--ELV 289
M E Q + ++ L
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 290 RLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH 332
C + R + ++ L E V H
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHH 332
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 5e-21
Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 38/272 (13%)
Query: 76 VYKGKLENQRR-IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
K + +K R R FL+E + + L + + +G + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 193
EY+ TL + W+ R+ +A + Y S + H DLN++ L
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 194 EDGNPRLSTFGL--------------MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE 235
E+ N ++ FGL + + + P PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 236 SVIYSFGTLLLDLLSGKHIPP-----SHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELV 289
++SFG +L +++ + P + L L +C
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFF 253
Query: 290 RLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
+ RC +P +RP+ L L L+
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-20
Identities = 49/263 (18%), Positives = 95/263 (36%), Gaps = 40/263 (15%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY+ +AVK D +EA+ L++ + L G C +
Sbjct: 22 KVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAY 188
LV E+ L + L + + + + +A+ + Y + ++ DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 189 RILFDEDGNPRLST--------FGLMKNSRD-GKSYSTNLAFTP----PEYLRTGRVTPE 235
IL + + FGL +R+ ++ + A PE +R +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 236 SVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVR 290
S ++S+G LL +LL+G+ I + L + + +C E +
Sbjct: 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAK 245
Query: 291 LASRCLQYEPRERPNPKSLVTAL 313
L C +P RP+ +++ L
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQL 268
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-20
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 42/269 (15%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP-------RQFLEEARSVGQLRNNRLTNLLGCCC 126
+V+KG+ ++++ +A+K ++F E + L + + L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL 185
+V E++P L L + HP+KW+++LR++L +A +EY ++ + H DL
Sbjct: 94 NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 186 NAYRILFDEDGNPRLST-----FGLMKNSRDGKSYSTNLAFTP----PEYL--RTGRVTP 234
+ I FGL S+ + L PE + T
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 235 ESVIYSFGTLLLDLLSGK----HIPPSHA--LDLIRDRNLQM-LTDSCLEGQFTDDDGTE 287
++ YSF +L +L+G+ +++IR+ L+ + + C
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------R 258
Query: 288 LVRLASRCLQYEPRERPNPKSLVTALSPL 316
L + C +P++RP+ +V LS L
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 45/279 (16%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDP-----RQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
VY G+ + +A++ + + F E + Q R+ + +G C
Sbjct: 48 QVYHGRWHGE--VAIRLID---IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
++ TL + + ++ + + + Y +KG + H DL +
Sbjct: 103 HLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSK 159
Query: 189 RILFDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTP-------PEYLRTGRVTPESV-- 237
+ +D +G ++ FGL + L PE +R E
Sbjct: 160 NVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKL 218
Query: 238 -------IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
+++ GT+ +L + + P + + L+ G
Sbjct: 219 PFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI--------GMGK 270
Query: 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 325
E+ + C +E ERP L+ L L K SH
Sbjct: 271 EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 2e-18
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 194
EYM +L L ++ + + +A + Y H DL A IL E
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+ +++ FGL + D + + A +T PE GR T +S ++SFG LL +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 250 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ +P LD + +R +M C E L L +C + EP ER
Sbjct: 376 TKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 425
Query: 304 PNPKSLVTALSPLQKETE 321
P + L L TE
Sbjct: 426 PTFEYLQAFLEDYFTSTE 443
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 3e-18
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 26/260 (10%)
Query: 76 VYKGKLENQR-RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VY+G + +AVK + + +FL+EA + ++++ L LLG C ++
Sbjct: 236 VYEGVWKKYSLTVAVKT-LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 193
E+M L +L + + L + ++ A+EY K H +L A L
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 248
E+ +++ FGL + + A +T PE L + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 249 LSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ P S +L+ +++ +M + C E ++ L C Q+ P +
Sbjct: 413 ATYGMSPYPGIDLSQVYELL-EKDYRMERPEGCPE---------KVYELMRACWQWNPSD 462
Query: 303 RPNPKSLVTALSPLQKETEV 322
RP+ + A + +E+ +
Sbjct: 463 RPSFAEIHQAFETMFQESSI 482
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 4e-18
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 26/258 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ ++AVK + FL EA + L++++L L + + ++
Sbjct: 204 VWMATYNKHTKVAVKT-MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 194
E+M +L L E + +A+ + + + H DL A IL
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+++ FGL + D + + A +T PE + G T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 250 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ IP + + +R +M ++C E EL + RC + P ER
Sbjct: 380 TYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 429
Query: 304 PNPKSLVTALSPLQKETE 321
P + + + L TE
Sbjct: 430 PTFEYIQSVLDDFYTATE 447
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 4e-18
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 194
EYM +L L ++ + + +A + Y H DL A IL E
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+ +++ FGL + D + + A +T PE GR T +S ++SFG LL +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 250 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ +P LD + +R +M C E L L +C + EP ER
Sbjct: 459 TKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 508
Query: 304 PNPKSLVTALSPLQKETE 321
P + L L TE
Sbjct: 509 PTFEYLQAFLEDYFTSTE 526
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 51/257 (19%), Positives = 110/257 (42%), Gaps = 26/257 (10%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VV GK + Q +AVK + +F +EA+++ +L + +L G C + +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 193
EY+ N L +L ++ + L + + + + + S H DL A L D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 248
D ++S FG+ + D + S+ ++ PE + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 249 LSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
S +P S + + + ++ + + ++ C P +
Sbjct: 199 FSLGKMPYDLYTNSEVVLKV-SQGHRLYRPHLASD---------TIYQIMYSCWHELPEK 248
Query: 303 RPNPKSLVTALSPLQKE 319
RP + L++++ PL+++
Sbjct: 249 RPTFQQLLSSIEPLREK 265
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 1e-17
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 30/256 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LV 134
V G + +AVK A + FL EA + QLR++ L LLG E L +V
Sbjct: 209 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 193
EYM +L +L + L+ L + +A+EY H DL A +L
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLL 249
ED ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 250 S-GKH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
S G+ IP + + ++ +M D C + + C + R
Sbjct: 381 SFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATR 430
Query: 304 PNPKSLVTALSPLQKE 319
P L L ++
Sbjct: 431 PTFLQLREQLEHIRTH 446
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 75 VVYKGKLENQR-RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 192
+ E+M L +L + + L + ++ A+EY K H DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLD 247
E+ +++ FGL + + A +T PE L + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 248 LLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ + P S +L+ + C E ++ L C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255
Query: 303 RPNPKSLVTALSPLQKETEV 322
RP+ + A + +E+ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 2e-17
Identities = 65/257 (25%), Positives = 104/257 (40%), Gaps = 30/257 (11%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-L 133
V G + +AVK A + FL EA + QLR++ L LLG E L +
Sbjct: 36 DVMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 192
V EYM +L +L + L+ L + +A+EY H DL A +L
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDL 248
ED ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 249 LS-GKH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
S G+ IP + + ++ +M D C + + C +
Sbjct: 208 YSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAM 257
Query: 303 RPNPKSLVTALSPLQKE 319
RP+ L L ++
Sbjct: 258 RPSFLQLREQLEHIKTH 274
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 28/259 (10%)
Query: 76 VYKGKLENQR-RIAVKRFNR-MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
V+ G+L +AVK + +FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 192
V E + L E ++ L++V A +EY SK H DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLAF------TPPEYLRTGRVTPESVIYSFGTLLL 246
E ++S FG+ + DG ++ T PE L GR + ES ++SFG LL
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 247 DLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
+ S P + + ++ ++ + C + + RL +C YEP
Sbjct: 307 ETFSLGASPYPNLSNQQTREFV-EKGGRLPCPELCPD---------AVFRLMEQCWAYEP 356
Query: 301 RERPNPKSLVTALSPLQKE 319
+RP+ ++ L ++K
Sbjct: 357 GQRPSFSTIYQELQSIRKR 375
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 3e-17
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 194
EYM N +L L + L + +A+ + + + H DL A IL +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+ +++ FGL + D + + A +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 250 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ IP + + +R +M+ D+C E EL +L C + P +R
Sbjct: 205 THGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDR 254
Query: 304 PNPKSLVTALSPLQKETE 321
P L + L TE
Sbjct: 255 PTFDYLRSVLEDFFTATE 272
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 5e-16
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 26/257 (10%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VV GK Q +A+K + +F+EEA+ + L + +L L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 193
EYM N L +L H + L + + +A+EY SK H DL A L +
Sbjct: 98 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ G ++S FGL + D + S+ + ++PPE L + + +S I++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 249 LSGKHIP-P----SHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
S +P S + I + L++ E ++ + C + E
Sbjct: 215 YSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASE---------KVYTIMYSCWHEKADE 264
Query: 303 RPNPKSLVTALSPLQKE 319
RP K L++ + + E
Sbjct: 265 RPTFKILLSNILDVMDE 281
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 5e-16
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
+V+ G N+ ++A+K A F+EEA + +L + +L L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 193
E+M + L+ +L + L + L + + + Y + H DL A L
Sbjct: 82 TEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVG 138
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 248
E+ ++S FG+ + D + S+ + PE R + +S ++SFG L+ ++
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 249 LSGKHIP-P----SHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
S IP S ++ I ++ + ++ + C + P +
Sbjct: 199 FSEGKIPYENRSNSEVVEDI-STGFRLYKPRLAST---------HVYQIMNHCWRERPED 248
Query: 303 RPNPKSLVTALSPLQK 318
RP L+ L+ + +
Sbjct: 249 RPAFSRLLRQLAEIAE 264
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 7e-16
Identities = 60/280 (21%), Positives = 103/280 (36%), Gaps = 37/280 (13%)
Query: 76 VYKGKL--------ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
++KG ++ + +K ++ F E A + +L + L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 186
GDE +LV E++ +L +L + + +L V LA A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 187 AYRILFDEDGNPR--------LSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-TPESV 237
A IL + + + LS G+ + + PPE + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 238 IYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
+SFGT L ++ SG P L DR Q EL L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-----------HQLPAPKAAELANLI 249
Query: 293 SRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH 332
+ C+ YEP RP+ ++++ L+ L VP H
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHHH 289
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-15
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 32/266 (12%)
Query: 76 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G+ +N+ + A+K +R+ FL E + L + + L+G +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 131 RLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
+ YM + L + + + L +A+ +EY + H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVTPESVIYS 240
+ DE +++ FGL ++ D + YS T E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 241 FGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295
FG LL +LL+ G HI P + + C + L ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264
Query: 296 LQYEPRERPNPKSLVTALSPLQKETE 321
+ +P RP + LV + +
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 32/266 (12%)
Query: 76 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 131 -RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
L+V YM + L + ETH + L +A+ ++Y SK H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVTPESVIYS 240
+ DE +++ FGL ++ D + YS + E L+T + T +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 241 FGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295
FG LL +L++ G + + + + C + L + +C
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVMLKC 268
Query: 296 LQYEPRERPNPKSLVTALSPLQKETE 321
+ RP+ LV+ +S +
Sbjct: 269 WHPKAEMRPSFSELVSRISAIFSTFI 294
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 4e-15
Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 45/280 (16%)
Query: 76 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V + +L + ++AVK + + +A D +FL EA + + + + L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 130 ER------LLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
+ +++ +M + L + +R ++ +A +EY +S+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157
Query: 180 ALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY---STNLAF----TPPEYLRT 229
H DL A + ED ++ FGL SR Y E L
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 230 GRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284
T S +++FG + ++++ G+ I + + + N C+E
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266
Query: 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPS 324
E+ L +C +P++RP+ L L + V S
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 6e-15
Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 38/271 (14%)
Query: 76 VYKGKLEN------QRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VY+G + + R+A+K N A + +FL EA + + + + LLG +G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 129 DERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRA 180
L++ E M L +P+ L ++ +A + Y +
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158
Query: 181 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVT 233
H DL A + ED ++ FG+ ++ + Y PE L+ G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 234 PESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288
S ++SFG +L ++ + + + L + + L D+C + L
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 269
Query: 289 VRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
L C QY P+ RP+ +++++ +
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 54/263 (20%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 76 VYKGKL----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V++G +A+K R+ FL+EA ++ Q + + L+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
++ E L L + A + L+ AL Y SK H D+ A
Sbjct: 465 VWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTL 244
+L + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 245 LLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632
Query: 300 PRERPNPKSLVTALSPLQKETEV 322
P RP L LS + +E ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 1e-14
Identities = 50/292 (17%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCCCEGDER- 131
V+ GK ++ +AVK F + + E + Q R N+L +G
Sbjct: 53 VWMGKWRGEK-VAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 132 ---LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALY 182
L+ +Y N +L +L ++ + L++ L + T A+
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 183 H-DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVT 233
H DL + IL ++G ++ GL + ++ + T PE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 234 PESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEG 278
+YSFG +L ++ P H L M C++
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 279 Q--------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322
+D+ ++ +L + C + P R + L+ + + ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 3e-14
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQD 438
M++ K+KG+ A ++ DA++CY++ I + P +Y+ RS Y Q
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 439 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491
A D + + P W +AAAL + EA+ +EG E N
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE-ANNPQL 108
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 3e-14
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 38/264 (14%)
Query: 76 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 131 -RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
L+V YM + L + ETH + L +A+ +++ SK H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 189 RILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAF-----TPPEYLRTGRVTPESV 237
+ DE +++ FGL +RD ++ A E L+T + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 238 IYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
++SFG LL +L++ G + + + + C + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329
Query: 293 SRCLQYEPRERPNPKSLVTALSPL 316
+C + RP+ LV+ +S +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRISAI 353
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 4e-14
Identities = 57/274 (20%), Positives = 97/274 (35%), Gaps = 35/274 (12%)
Query: 76 VYKGKLEN-----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V + +AVK A P + +E + L + + GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 130 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 186
LV EY+P +L +L H + A L + + + Y ++ H DL
Sbjct: 107 AASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLA 161
Query: 187 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 239
A +L D D ++ FGL K +G Y + PE L+ + S ++
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 240 SFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG----------TE 287
SFG L +LL+ P + +T L + G E
Sbjct: 222 SFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL--LERGERLPRPDKCPAE 279
Query: 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
+ L C + E RP ++L+ L + ++ +
Sbjct: 280 VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 5e-14
Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 31/264 (11%)
Query: 75 VVYKGKLENQRR----IAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
V++G + +A+K + +FL+EA ++ Q + + L+G
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVKLIG-VITE 87
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
+ ++ E L L + + A + L+ AL Y SK H D+ A
Sbjct: 88 NPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAA 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 242
+L + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 204
Query: 243 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
+ ++L P + + I + + +C L L ++C
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWA 255
Query: 298 YEPRERPNPKSLVTALSPLQKETE 321
Y+P RP L LS + +E +
Sbjct: 256 YDPSRRPRFTELKAQLSTILEEEK 279
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 6e-14
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K +G+ A +K+ AI+ YTQ + +P + R+ Y S + A DA A +
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 494
+ P + A A M A+ A ++G E S A ++
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 7e-14
Identities = 47/291 (16%), Positives = 96/291 (32%), Gaps = 52/291 (17%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR--SVGQLRNNRLTNLLGCCCEGD---- 129
V++GK +AVK F+ + R + EA LR+ + + + +
Sbjct: 58 VWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH 183
+ LV++Y + +L +L + + +++ L A L + T A+ H
Sbjct: 114 QLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 184 -DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTP 234
DL + IL ++G ++ GL + + T PE L +
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINM 229
Query: 235 ESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ 279
+ IY+ G + ++ I P + L +M C +
Sbjct: 230 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 289
Query: 280 --------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322
+ + + ++ C R + LS L ++ +
Sbjct: 290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 7e-14
Identities = 63/315 (20%), Positives = 116/315 (36%), Gaps = 44/315 (13%)
Query: 76 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V G+L + + +A+K + R FL EA +GQ + + L G +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY-H-DL 185
++V EYM N +L L H ++ + + ++ +A ++Y + G Y H DL
Sbjct: 120 PVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 186 NAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVI 238
A IL + + ++S FGL + D + T PE + + T S +
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 239 YSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293
+S+G +L +++S P + + + C L +L
Sbjct: 234 WSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLML 284
Query: 294 RCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTA 353
C Q + RP + +V+ L L + P + + +A S L
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRN---PGSLKIITSAAARPSNLLLDQSNVDITTFRT 341
Query: 354 IHEILEKIS---YKD 365
+ L + K+
Sbjct: 342 TGDWLNGVWTAHCKE 356
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 38/269 (14%)
Query: 75 VVYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
V G+L + +A+K + R FL EA +GQ + + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY-H-D 184
++V EYM N +L L TH ++ + + ++ + + Y + G Y H D
Sbjct: 123 RLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRD 176
Query: 185 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESV 237
L A +L D + ++S FGL + D +T T PE + + S
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236
Query: 238 IYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
++SFG ++ ++L+ P + + + C L +L
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLM 287
Query: 293 SRCLQYEPRERPNPKSLVTALSPLQKETE 321
C + +RP +V+ L L + E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 59/290 (20%), Positives = 112/290 (38%), Gaps = 38/290 (13%)
Query: 76 VYKGKL-----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG L + + +A+K + FL EA +GQ ++ + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-DL 185
+++ EYM N L K L ++++ + ++ +A ++Y + H DL
Sbjct: 119 KPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDL 173
Query: 186 NAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVI 238
A IL + + ++S FGL +++ + ++ T PE + + T S +
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 233
Query: 239 YSFGTLLLDLLSGKHIP-P----SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293
+SFG ++ ++++ P + I D C + +L
Sbjct: 234 WSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLMM 284
Query: 294 RCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLG 343
+C Q E RP +V+ L L + + L S+ S G
Sbjct: 285 QCWQQERARRPKFADIVSILDKLIRAPD-SLKTLADFDPRVSIRLPSTSG 333
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 44/276 (15%)
Query: 76 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V +G L ++AVK + + + + +FL EA + + + LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 130 -----ERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
+ +++ +M L + L+ ++ +A +EY +++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167
Query: 181 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY---STNLAF----TPPEYLRTG 230
H DL A + +D ++ FGL S+ Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224
Query: 231 RVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285
T +S +++FG + ++ + G + D + + + CL+
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276
Query: 286 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL + C + +P +RP L L L +
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 3e-13
Identities = 53/279 (18%), Positives = 97/279 (34%), Gaps = 41/279 (14%)
Query: 75 VVYKGKLENQR-----RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V + + + +AVK+ R F E + L+++ + G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 130 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 186
R L+ EY+P +L +L + + L+ + + +EY +K H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 187 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 239
IL + + ++ FGL K K Y PE L + + S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 240 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLA--- 292
SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPRPD 286
Query: 293 ----------SRCLQYEPRERPNPKSLVTALSPLQKETE 321
+ C +RP+ + L + ++ +
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 4e-13
Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 41/276 (14%)
Query: 76 VYKGKLEN------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V+ + N + +AVK + F EA + L++ + G C +GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 130 ERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKGRALY- 182
++V EYM + + L H + + L L+Q L + + G Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMV-YL 149
Query: 183 ------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNLAF----TPPEYLRT 229
H DL L + ++ FG+ ++ Y + PPE +
Sbjct: 150 ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 209
Query: 230 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284
+ T ES ++SFG +L ++ + GK + + ++ I + C +
Sbjct: 210 RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK------- 262
Query: 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
E+ + C Q EP++R N K + L L K T
Sbjct: 263 --EVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 5e-13
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 35/267 (13%)
Query: 75 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG + +A+K P ++ L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
L+ + MP L ++ + L + +A+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVTPESVIYSF 241
+L + +++ FGL K + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 242 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 294
G + +L++ G IP S ++ R Q C ++ + +
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTI---------DVYMIMRK 254
Query: 295 CLQYEPRERPNPKSLVTALSPLQKETE 321
C + RP + L+ S + ++ +
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQ 281
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 70.4 bits (172), Expect = 5e-13
Identities = 52/264 (19%), Positives = 96/264 (36%), Gaps = 30/264 (11%)
Query: 75 VVYKGKLENQRR---IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V +G +++ +A+K + D + + EA+ + QL N + L+G C+ +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
+LV E L K L + + ++ ++ ++Y K H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFG 242
+L ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 243 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
+ + LS P + I C EL L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577
Query: 298 YEPRERPNPKSLVTALSPLQKETE 321
Y+ +RP+ ++ +
Sbjct: 578 YKWEDRPDFLTVEQRMRACYYSLA 601
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 9e-13
Identities = 48/291 (16%), Positives = 102/291 (35%), Gaps = 39/291 (13%)
Query: 75 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
V+KG + + +K + + + ++G L + + LLG C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
LV +Y+P +L H+ + + L + +A+ + Y G + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
+L +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 242 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 294
G + +L++ G + + DL+ R Q C ++ + +
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP--QICTI---------DVYMVMVK 252
Query: 295 CLQYEPRERPNPKSLVTALSPLQKE----TEVPSHVLMGIPHSASVSPLSP 341
C + RP K L + + ++ + GI L+
Sbjct: 253 CWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTN 303
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 9e-13
Identities = 52/285 (18%), Positives = 99/285 (34%), Gaps = 52/285 (18%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEA--RSVGQLRNNRLTNLLGCCCEGD---- 129
V++G + + +AVK F+ D + + E + LR+ + +
Sbjct: 24 VWRGSWQGEN-VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH 183
+ L+ Y +L +L + + LR+VL +A L + T A+ H
Sbjct: 80 QLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 184 -DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTP 234
DL + IL ++G ++ GL +++ + T PE L +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQV 195
Query: 235 ESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ 279
+ I++FG +L ++ PP + + M C++ Q
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 280 --------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
F+D T L +L C P R + L+ +
Sbjct: 256 RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 9e-13
Identities = 55/264 (20%), Positives = 97/264 (36%), Gaps = 32/264 (12%)
Query: 75 VVYKGKLENQRR---IAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V KG + ++ +AVK + + L EA + QL N + ++G CE +
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
+LV E L K+L K + +V ++ ++Y H DL A
Sbjct: 91 SWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIYSF 241
+L ++S FGL K R ++Y T+ + PE + + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 242 GTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296
G L+ + S P S ++ C E+ L + C
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257
Query: 297 QYEPRERPNPKSLVTALSPLQKET 320
Y+ RP ++ L +
Sbjct: 258 TYDVENRPGFAAVELRLRNYYYDV 281
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 9e-13
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K KG+ F++ D A++ YT+ I +Y+ R+ CY Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 494
+ P + +AAAL AM +A ++ L+ A
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD-SSCKEAADG 123
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 55/307 (17%), Positives = 112/307 (36%), Gaps = 40/307 (13%)
Query: 75 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG + +A+K P ++ L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
L+ + MP L ++ + L + +A+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
+L + +++ FGL K + + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 242 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 294
G + +L++ G IP S ++ R Q C ++ + +
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTI---------DVYMIMVK 254
Query: 295 CLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAI 354
C + RP + L+ S + ++ + + I + SP ++ R L
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQ----RYLVIQGDERMHLPSP-TDSNFYRALMDE 309
Query: 355 HEILEKI 361
++ + +
Sbjct: 310 EDMDDVV 316
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-12
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K KG+ F++ D A+ Y + + + +Y+ R+ C Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 484
+ + +AA L AM ++AQ A ++ ++
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 1e-12
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 494
+ A + M +EA L+ +L ++ G
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-12
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTV---YARRSLCYLMSDMPQDALNDAMQ 445
K++G+ F + +A CY + I +P V Y R+LCYL P+ AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 446 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 494
A + A + M +EA L+ +L ++ G
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 117
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 2e-12
Identities = 42/280 (15%), Positives = 70/280 (25%), Gaps = 49/280 (17%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLR---NNRLTNLLGCCCE 127
VV+ + +E A+K F A + E + +L +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 128 GD-----------------------ERLLVAEYMP--NETLAKHLFHWET--HPMKWAMR 160
D LL+ E L L
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 161 LRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGL-MKNSRDGKSY 215
+ L + SKG L H N + DG L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 216 STNLAFTPPEYL--RTGRVTPESVIYSFGTLLLDLLSGK---HIPPSHALDLIRDRNLQM 270
S + + P E+L T T + G + + + + +L++
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
L + L R L ++ R R P +
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 29/263 (11%)
Query: 75 VVYKGKLENQR----RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGD 129
VY+G N + +AVK + D ++ F+ EA + L + + L+G E +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
++ E P L +L + + + L + +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGT 243
IL +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 244 LLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298
+ ++LS P + ++ + D C L L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253
Query: 299 EPRERPNPKSLVTALSPLQKETE 321
+P +RP LV +LS + + +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 2e-12
Identities = 48/337 (14%), Positives = 82/337 (24%), Gaps = 80/337 (23%)
Query: 75 VVYKGK-LENQRRIAVK---RFNRMAWPDPRQFLEEARSVGQLRNNR------------- 117
+ E V R +Q EE + LR +
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 118 ---LTNLLGCCCEGDER-------------LLVAEYMPNETLAKHLFHW--ETHPMKWAM 159
L R L +T + L +
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 160 RLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSY 215
RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 213 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 216 STNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 265
F PPE +T ++ G + + P+ +
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTDDAALGG 325
Query: 266 RNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERPNP------------KSLVT 311
E F + L L+Y +R P ++ ++
Sbjct: 326 ----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375
Query: 312 ALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSR 348
A PL + P+ P S + EA +
Sbjct: 376 AALPLYQTDGEPTREGGAPPSGTSQPDEAGAAEAVTA 412
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDA 439
++ K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYA 66
Query: 440 LNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 484
L DA +A + + Y +AA+ A+G A + ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 53/281 (18%), Positives = 96/281 (34%), Gaps = 45/281 (16%)
Query: 75 VVYKGKLE-----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V + + +AVK+ R F E + L+++ + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 130 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-D 184
R L+ EY+P +L +L + H + L+ + + +EY +K H D
Sbjct: 85 RRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRD 139
Query: 185 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESV 237
L IL + + ++ FGL K K + PE L + + S
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 238 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLA- 292
++SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 200 VWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPR 253
Query: 293 ------------SRCLQYEPRERPNPKSLVTALSPLQKETE 321
+ C +RP+ + L + ++
Sbjct: 254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 52/274 (18%), Positives = 97/274 (35%), Gaps = 38/274 (13%)
Query: 76 VYKGKLENQR------RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VY+G++ ++AVK + D FL EA + + + + +G +
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 129 DERLLVAEYMPNETLAKHL-----FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183
R ++ E M L L + + L V +A +Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163
Query: 184 -DLNAYRILFDEDGNPRL---STFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVT 233
D+ A L G R+ FG+ ++ Y + PPE G T
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 234 PESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288
++ +SFG LL ++ S G L+ + +C +
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG---------PV 274
Query: 289 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322
R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 57/277 (20%), Positives = 99/277 (35%), Gaps = 44/277 (15%)
Query: 76 VYKGKLENQR------RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VY+G++ ++AVK + D FL EA + + + + +G +
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 129 DERLLVAEYMPNETLAKHL---FHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH 183
R ++ E M L L + P AM L V +A +Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204
Query: 184 -DLNAYRILFDEDGNPRL---STFGLMKNSRD--GKSY---STNLAF----TPPEYLRTG 230
D+ A L G R+ FG+ +RD Y PPE G
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG 261
Query: 231 RVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285
T ++ +SFG LL ++ S G L+ + +C
Sbjct: 262 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG-------- 313
Query: 286 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322
+ R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 314 -PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 42/283 (14%)
Query: 76 VYKGKLENQR------RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V+ + N +AVK + + F EA + L++ + G C EG
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 130 ERLLVAEYMPNETLAKHL-------------FHWETHPMKWAMRLRVVLHLAQALEYCTS 176
L+V EYM + L + L P+ L V +A + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 177 KGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRT 229
H DL L + ++ FG+ ++ Y PPE +
Sbjct: 177 LH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY 234
Query: 230 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284
+ T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 235 RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP------- 287
Query: 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVL 327
E+ + C Q EP++R + K + L L + V VL
Sbjct: 288 --EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 328
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 5e-12
Identities = 51/264 (19%), Positives = 95/264 (35%), Gaps = 30/264 (11%)
Query: 75 VVYKGKLENQRR---IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V +G +++ +A+K + D + + EA+ + QL N + L+G C+ +
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
+LV E L K L + + ++ ++ ++Y K H DL A
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIYSFG 242
+L ++S FGL K SY + + PE + + + S ++S+G
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 243 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
+ + LS P + I C EL L S C
Sbjct: 201 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 251
Query: 298 YEPRERPNPKSLVTALSPLQKETE 321
Y+ +RP+ ++ +
Sbjct: 252 YKWEDRPDFLTVEQRMRACYYSLA 275
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 6e-12
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 34/261 (13%)
Query: 75 VVYKGKL----ENQRRIAVK--RFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCE 127
VV +G+ +AVK + + ++ P+ F+ E ++ L + L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 186
+V E P +L L R + +A+ + Y SK H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 187 AYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTN------LAFTPPEYLRTGRVTPESVIY 239
A +L ++ FGLM+ ++ Y A+ PE L+T + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 240 SFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLAS 293
FG L ++ + P S L I ++ + C + ++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ---------DIYNVMV 259
Query: 294 RCLQYEPRERPNPKSLVTALS 314
+C ++P +RP +L L
Sbjct: 260 QCWAHKPEDRPTFVALRDFLL 280
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 6e-12
Identities = 45/249 (18%), Positives = 87/249 (34%), Gaps = 25/249 (10%)
Query: 76 VYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCC---CEGD 129
VYKG E +A + ++F EEA + L++ + +G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 130 ERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
+ + LV E M + TL +L MK + + + L++ ++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 188 YRILFD-EDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTL 244
I G+ ++ GL R + + F PE +Y+FG
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMC 218
Query: 245 LLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
+L++ + ++ + + +T F E+ + C++
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271
Query: 301 RERPNPKSL 309
ER + K L
Sbjct: 272 DERYSIKDL 280
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 7e-12
Identities = 60/282 (21%), Positives = 103/282 (36%), Gaps = 47/282 (16%)
Query: 76 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRN-NRLTNLLGCC 125
V + ++AVK A D + E + + + NLLG C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 126 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 171
+ ++ EY L ++L + +H + + + ++ A+ +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 172 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 224
EY SK H DL A +L ED +++ FGL ++ Y +TN P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 225 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 279
E L T +S ++SFG LL ++ + G +P L+++ + +C
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320
Query: 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL + C P +RP K LV L + T
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 8e-12
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFI--DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 446
+K+G+ F+ D A+ YTQ + DA ++ R+ C+L + A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 447 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491
A Y ++ AL +G ++A + L+ +LE KN
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE-PKNKVF 135
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 45/275 (16%)
Query: 76 VYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V + + ++AVK + +E + L + + G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 130 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 186
L+ E++P+ +L ++L + + +L+ + + + ++Y S+ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 187 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 239
A +L + + ++ FGL K K Y + PE L + S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 240 SFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLAS- 293
SFG L +LL+ AL L GQ T + RL
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTH--------GQMTVTRLVNTLKEGKRLPCP 265
Query: 294 ------------RCLQYEPRERPNPKSLVTALSPL 316
+C +++P R + ++L+ L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 1e-11
Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 34/194 (17%)
Query: 132 LLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL--- 185
L +T + L + RL++ L + + L G L H L
Sbjct: 178 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPV 235
Query: 186 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYL-----------RTGRVTP 234
+ I+ D+ G L+ F + S + F PPE R +T
Sbjct: 236 D---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTF 292
Query: 235 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR-LAS 293
++ G ++ + P I ++ + + VR L
Sbjct: 293 SFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRS---CKNIPQPVRALLE 341
Query: 294 RCLQYEPRERPNPK 307
L+Y +R P
Sbjct: 342 GFLRYPKEDRLLPL 355
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 61/278 (21%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 76 VYKGKL---ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCEGDE 130
V K ++ + A+KR A D R F E + +L ++ + NLLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 131 RLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQALEYCTS 176
L EY P+ L L + + + +LH A+ ++Y +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 177 KGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRT 229
K H DL A IL E+ +++ FGL SR + Y T E L
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 230 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284
T S ++S+G LL +++S G + + + + +C +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268
Query: 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322
E+ L +C + +P ERP+ ++ +L+ + +E +
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-11
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 445
K +G+ + ++ + A+ Y + I+ ++P + R+ Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 446 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE-----AKKN 488
A I P + A ALS++ EA K+ L+ K N
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN 119
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 2e-11
Identities = 63/300 (21%), Positives = 103/300 (34%), Gaps = 49/300 (16%)
Query: 76 VYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V + +AVK+ R F E + + L ++ + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 131 R--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKG------RA 180
+ LV EY+P+ L L R R L ++ L Y + KG R
Sbjct: 99 QSLRLVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 181 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRV 232
H DL A IL + + + +++ FGL K K Y PE L
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 233 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG------- 285
+ +S ++SFG +L +L + S + + +R + + ++G
Sbjct: 208 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP 267
Query: 286 ---TELVRLASRCLQYEPRERPNPKSLVTAL-----SPLQKETEVPSHVLMGIPHSASVS 337
E+ L C P++RP+ +L L ET + G HS S S
Sbjct: 268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKHHSLSFS 327
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 54/270 (20%), Positives = 95/270 (35%), Gaps = 42/270 (15%)
Query: 76 VYKGKLENQR------RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG L +A+K A R+ F EA +L++ + LLG +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 129 DERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKGRALY 182
++ Y + E L H + ++ L + + G Y
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME-Y 143
Query: 183 -------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLR 228
H DL +L + N ++S GL + Y + PE +
Sbjct: 144 LSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 203
Query: 229 TGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA----LDLIRDRNLQMLTDSCLEGQFTDD 283
G+ + +S I+S+G +L ++ S P ++ +++IR+R + D C
Sbjct: 204 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA------ 257
Query: 284 DGTELVRLASRCLQYEPRERPNPKSLVTAL 313
+ L C P RP K + + L
Sbjct: 258 ---WVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 5e-11
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
+ +G F + D +A++ YT+ I Y+ R+ +A+ D +A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 494
P + A +A A A+ A L T +A+ N+ + +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 8e-11
Identities = 59/292 (20%), Positives = 108/292 (36%), Gaps = 47/292 (16%)
Query: 76 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNR-LTNLLGCC 125
V + + +AVK A D + E + + ++ + NLLG C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 126 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 171
+ ++ EY L ++L + + M + ++ A+ +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 172 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 224
EY S+ H DL A +L E+ +++ FGL ++ + Y +TN P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 225 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 279
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286
Query: 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIP 331
EL + C P +RP K LV L + T ++ + P
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 9e-11
Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 43/251 (17%)
Query: 64 IVSEHGEKAPNVVYKG---KLENQRRIAVK--RFNRMAWPDPRQ-FLEEARSVGQLRNNR 117
++ HG P ++ L+ R++A+ + D Q L + ++
Sbjct: 35 LLIFHGGVPPLQFWQALDTALD--RQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG 92
Query: 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK 177
+ +L L+VAE++ +L + +T P +R + LA A +
Sbjct: 93 VARVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADAAHRA 148
Query: 178 GRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 236
G + + R+ DG+ L+ M P+
Sbjct: 149 G--VALSIDHPSRVRVSIDGDVVLAYPATM-----------------------PDANPQD 183
Query: 237 VIYSFGTLLLDLLSGKHIPP---SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293
I G L LL + P + + D ++ +A+
Sbjct: 184 DIRGIGASLYALLVNR--WPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA 241
Query: 294 RCLQYEPRERP 304
R +Q + R
Sbjct: 242 RSVQGDGGIRS 252
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 45/244 (18%), Positives = 92/244 (37%), Gaps = 19/244 (7%)
Query: 76 VYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
K E+ R+ +K +RM+ + + E + +++ + E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
+V +Y L K + + + L + + AL++ + + L+ D+ + I
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 248
+DG +L FG+ + + TP PE +S I++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 249 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPN 305
+ K A +++ L + G F +L L S+ + PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 306 PKSL 309
S+
Sbjct: 271 VNSI 274
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 51/260 (19%), Positives = 85/260 (32%), Gaps = 53/260 (20%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARS-VGQLRN-NRLTNL--LGCCCEGDE 130
+VY+G +N R +AVKR + A V LR + N+ C + +
Sbjct: 40 IVYRGMFDN-RDVAVKRILP-------ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQ 91
Query: 131 RL-LVAEYMPNE----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-D 184
+ E K H P+ ++ L + S + H D
Sbjct: 92 FQYIAIELCAATLQEYVEQKDFAHLGLEPIT------LLQQTTSGLAHLHSLN--IVHRD 143
Query: 185 LNAYRILF---DEDGNPR--LSTFGLMKNSRDGKSYSTNLAF---TP----PEYLR---T 229
L + IL + G + +S FGL K G+ + + T PE L
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCK 203
Query: 230 GRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDD 284
T I+S G + ++S P A L+ +L L +
Sbjct: 204 ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE-------KHE 256
Query: 285 GTELVRLASRCLQYEPRERP 304
L + + +P++RP
Sbjct: 257 DVIARELIEKMIAMDPQKRP 276
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 58/282 (20%), Positives = 104/282 (36%), Gaps = 47/282 (16%)
Query: 76 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNR-LTNLLGCC 125
V + + +AVK A D + E + + ++ + NLLG C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 126 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 171
+ ++ EY L ++L + + M + ++ A+ +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 172 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 224
EY S+ H DL A +L E+ +++ FGL ++ + Y +TN P
Sbjct: 217 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274
Query: 225 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 279
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 275 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 332
Query: 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL + C P +RP K LV L + T
Sbjct: 333 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 5e-10
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ AL DA +A
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIE 68
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALK 478
+ + Y +AA+ A+G A +
Sbjct: 69 LDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 52/245 (21%), Positives = 84/245 (34%), Gaps = 26/245 (10%)
Query: 76 VYKG-KLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDER 131
V+K E+ R AVKR D + L E S ++ + L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
L E +L +H W + A + AL + S+G ++ D+ I
Sbjct: 133 YLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIF 189
Query: 192 FDEDGNPRLSTFGLMKN-SRDGKSYSTNLAF--TP----PEYLRTGRVTPESVIYSFGTL 244
G +L FGL+ G P PE L+ + ++S G
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEV----QEGDPRYMAPELLQGSY-GTAADVFSLGLT 244
Query: 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
+L++ P Q L L +FT +EL + L+ +P+ R
Sbjct: 245 ILEVACNME-LPHGG------EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA 297
Query: 305 NPKSL 309
++L
Sbjct: 298 TAEAL 302
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-10
Identities = 63/279 (22%), Positives = 105/279 (37%), Gaps = 52/279 (18%)
Query: 76 VYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
V K +AVK A P + R L E + Q+ + + L G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 129 DERLLVAEYMPN------------------ETLAKHLFHWETHPMKWAMRLRVVLH---- 166
LL+ EY + HP + A+ + ++
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 167 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF-- 221
++Q ++Y L H DL A IL E ++S FGL ++ + SY +
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPV 216
Query: 222 --TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDS 274
E L T +S ++SFG LL ++++ G + IPP +L++ + D+
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
C E E+ RL +C + EP +RP + L
Sbjct: 277 CSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-10
Identities = 64/291 (21%), Positives = 103/291 (35%), Gaps = 50/291 (17%)
Query: 76 VYKGKLEN------QRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 128
V++ + +AVK A D + F EA + + N + LLG C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 129 DERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 175
L+ EYM T+ + + + L A+ L
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 176 -SKGRALY-------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 221
+ G A Y H DL L E+ +++ FGL +N Y N A
Sbjct: 183 VAAGMA-YLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 222 -TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSC 275
PPE + R T ES ++++G +L ++ S G + + +RD N+ ++C
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC 301
Query: 276 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 326
EL L C P +RP+ S+ L + + E V
Sbjct: 302 PL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTVGV 343
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 1e-09
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 441
M + K++G+ F+Q ++A+ CY Q I A +P Y+ +++ + A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 442 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 480
Q + +++ + + A +++
Sbjct: 60 MCQQGLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 3e-09
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 16/192 (8%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY + ++A+K ++F E + QL + + +++ E D
Sbjct: 26 TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
LV EY+ TL++++ P+ + + +++ + H D+
Sbjct: 86 YYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQN 141
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-TP----PEYLRTGRVTPESVIYSFGTL 244
IL D + ++ FG+ K + TN T PE + + IYS G +
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 245 LLDLLSGKHIPP 256
L ++L G+ PP
Sbjct: 202 LYEMLVGE--PP 211
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 20/250 (8%)
Query: 69 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + M V QALE+ S ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKS 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 244 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
+ ++++ G+ + P AL LI L + + + +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257
Query: 300 PRERPNPKSL 309
+R + K L
Sbjct: 258 VEKRGSAKEL 267
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 48/283 (16%)
Query: 76 VYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRN-NRLTNLLGCCCE 127
V + + +AVK A + + E + + L N + NLLG C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 128 GDERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHL----AQAL 171
G L++ EY + + A+ L +L A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 172 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 224
+ SK H DL A IL ++ FGL ++ ++ +Y N P
Sbjct: 159 AFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 225 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNLQMLTDSCLEG 278
E + T ES ++S+G L +L S P P + +I++ + +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPA- 275
Query: 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
E+ + C +P +RP K +V + E+
Sbjct: 276 --------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 4e-09
Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 51/290 (17%)
Query: 75 VVYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
VV++ K + A+K R + + E +++ +L + + E +
Sbjct: 20 VVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 132 L------------LVAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKG 178
+ + E L + T + ++ L + L +A+A+E+ SKG
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138
Query: 179 RALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-TP-- 234
L H DL I F D ++ FGL+ + T L P TG+V T
Sbjct: 139 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 235 -------------ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281
+ I+S G +L +LL P S ++ +R +F
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVR------TLTDVRNLKFP 246
Query: 282 DDDGT---ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLM 328
+ L P ERP +++ + + ++ + P ++
Sbjct: 247 PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFEDLDFPGKTVL 294
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 54/283 (19%)
Query: 76 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEAR---SVGQLRNNRLTNLLGCC 125
V + + ++AVK A + + E + +GQ N + NLLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN--IVNLLGAC 119
Query: 126 CEGDERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY 173
G L++ EY F L +AQ + +
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAF 179
Query: 174 CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD---GKSY--STNLAF----TP 223
SK H D+ A +L ++ FGL +RD +Y N
Sbjct: 180 LASKN--CIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKWMA 234
Query: 224 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNLQMLTDSCLE 277
PE + T +S ++S+G LL ++ S P ++ L++D +
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK 294
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
+ + C EP RP + + + L +E
Sbjct: 295 ---------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 6e-09
Identities = 52/272 (19%), Positives = 102/272 (37%), Gaps = 31/272 (11%)
Query: 76 VYKGK-LENQRRIAVKR---FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
VY+ L + +A+K+ F+ M ++E + QL + + E +E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 132 LLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
+V E L++ + F + + + + L ALE+ S+ + H D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPA 165
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+ G +L GL + + + +L TP PE + +S I+S G L
Sbjct: 166 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 225
Query: 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF----TDDDGTELVRLASRCLQYEP 300
L ++ + + P + NL L + + +D EL +L + C+ +P
Sbjct: 226 LYEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279
Query: 301 RERPN-------PKSLVTALSPLQKETEVPSH 325
+RP+ K + + + H
Sbjct: 280 EKRPDVTYVYDVAKRMHACTASSLEHHH-HHH 310
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 6e-09
Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 69 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
GE + +V + + R++AVK + E + ++ + +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
G+E ++ E++ L + + V + QAL Y ++G ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGV-IHRDIKS 169
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 244 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
++++++ G+ P A+ +RD L +S + + L R L +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282
Query: 300 PRERPNPKSL 309
P+ER + L
Sbjct: 283 PQERATAQEL 292
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 9e-09
Identities = 54/282 (19%), Positives = 97/282 (34%), Gaps = 47/282 (16%)
Query: 76 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE 127
V + R +AVK A + R + E + + + ++ + NLLG C +
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 128 GDE-RLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLH----LAQALE 172
+++ E+ L+ +L K + L ++ +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 173 YCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPE 225
+ S+ H DL A IL E ++ FGL ++ Y + PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLTDSCLEGQ 279
+ T +S ++SFG LL ++ S P +++ D
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278
Query: 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
E+ + C EP +RP LV L L +
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 45/249 (18%), Positives = 83/249 (33%), Gaps = 30/249 (12%)
Query: 76 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
V++ K + + AVK+ + R EE + L + R+ L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKK---VRLEVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
E + +L + + + L + + LEY ++ L+ D+ A +L
Sbjct: 129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSS 185
Query: 195 DGNP-RLSTFGLMKNSRDGKSYSTNLAF-----TP----PEYLRTGRVTPESVIYSFGTL 244
DG+ L FG + + L T PE + + I+S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 245 LLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
+L +L+G H I ++ + + L+ EP
Sbjct: 246 MLHMLNGCHPWTQYFRGPLCLKIA-------SEPPPIREIPPSCAPLTAQAIQEGLRKEP 298
Query: 301 RERPNPKSL 309
R + L
Sbjct: 299 VHRASAMEL 307
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 3e-08
Identities = 54/293 (18%), Positives = 97/293 (33%), Gaps = 49/293 (16%)
Query: 76 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-- 132
V K + + R A+K+ R L E + L + + E +
Sbjct: 22 VVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80
Query: 133 -----------LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 181
+ EY N TL + + + R+ + +AL Y S+G +
Sbjct: 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW-RLFRQILEALSYIHSQG--I 137
Query: 182 YH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------------TP--- 223
H DL I DE N ++ FGL KN + T
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 224 -PEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281
E L TG + +YS G + +++ P S ++ + F
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIEFPPDFD 253
Query: 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALS----PLQKETEVPSHVLMGI 330
D+ ++ + ++P +RP ++L L+ P++ + EV L +
Sbjct: 254 DNKMKVEKKIIRLLIDHDPNKRPGARTL---LNSGWLPVKHQDEVIKEALKSL 303
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 5e-08
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 167 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 222
+ A++YC K + H DL A +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 223 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280
PE + G+ PE ++S G +L L+SG +P +NL+ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 281 TDDDG--TELVRLASRCLQYEPRERP 304
T+ L R L P +R
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG 257
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP--TVYARRSLCYLMSDMPQDALNDAMQA 446
K KG+ FR K DAI+ Y ++ + Y+ S CY+ + + + +A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 447 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491
+ P + +A+A +G +A L + +++
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 56/287 (19%), Positives = 97/287 (33%), Gaps = 51/287 (17%)
Query: 76 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE 127
V ++AVK A + + E + + QL ++ + NLLG C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 128 GDERLLVAEYMPN-----------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 175
L+ EY E ++ +E VL L +
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 176 -SKGRALY-------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 221
+KG + H DL A +L ++ FGL ++ +Y N
Sbjct: 181 VAKGME-FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK 239
Query: 222 -TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLTDS 274
PE L G T +S ++S+G LL ++ S P ++ LI++
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFY 299
Query: 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
E E+ + C ++ R+RP+ +L + L + E
Sbjct: 300 ATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 9e-08
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 161 LRVVLHLAQALEYCTSKGRALYH----DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 216
LRV+ L AL+ C + + DL + D N +L FGL + S++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 217 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
TP PE + +S I+S G LL +L + PP A + + L
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTA------FSQKELA 225
Query: 273 DSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSL 309
EG+F EL + +R L + RP+ + +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 9e-08
Identities = 43/353 (12%), Positives = 90/353 (25%), Gaps = 97/353 (27%)
Query: 13 WNSQ------FKATVL----EAPDVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFAVE 62
N++ +L D + + T +++K+
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL---LL-- 308
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAV----KRFNRMAWPDPRQFLEEARSVGQLRNNRL 118
+ + P V N RR+++ R W + + ++L
Sbjct: 309 KYLDCRPQDLPREVLTT---NPRRLSIIAESIRDGLATW----DNWK------HVNCDKL 355
Query: 119 TNLLGCCCEG-DERLLVAEYM-----------PNETLAKHLFHW----ETHPM------- 155
T ++ + + P L+ L W ++ M
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS--LI-WFDVIKSDVMVVVNKLH 412
Query: 156 ------KWAMRLRVVLHLAQALEYCTSKGRALYHD--LNAYRIL--FDEDGNPRLSTFGL 205
K + + + H ++ Y I FD D
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY 472
Query: 206 --------MKNSRDGKSYS------TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL-LS 250
+KN + + + F + T + S L L
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS--TAWNASGSILNTLQQLKFY 530
Query: 251 GKHIPPSHALD--LIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
+I + L+ L + ++ + ++TD L+R+A L E
Sbjct: 531 KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD-----LLRIA---LMAE 575
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 1e-06
Identities = 93/621 (14%), Positives = 177/621 (28%), Gaps = 220/621 (35%)
Query: 34 EMSEV-----DGLPSFRE-F--------TLEQLKNATSGFAVENIVSEHGEKAPNVVYK- 78
E E D L F + F + K+ S +++I+ + + V
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII-----MSKDAVSGT 64
Query: 79 ----GKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
L +++ V++F +FL Q + + +T + E +RL
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY---IEQRDRL-- 119
Query: 135 AEYMPNETLAKHLFHWETHPM----KWAMRLR----VVLH---------LAQALEYCTSK 177
Y N+ AK+ P + + LR V++ +A L+ C S
Sbjct: 120 --YNDNQVFAKY-NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA--LDVCLSY 174
Query: 178 GRALYHDLNAYRILFDEDGNPR-----LSTF--GLMKNSRDGKSYSTNLAFTPPE---YL 227
D + + +P L + N +S+N+ L
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 228 R---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LI--RDRNL------QML 271
R + ++ +LL++ + K +A + L+ R + +
Sbjct: 235 RRLLKSKPYENCLL-----VLLNVQNAKAW---NAFNLSCKILLTTRFKQVTDFLSAATT 286
Query: 272 TDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERP------NP---------------- 306
T L+ T D+ L+ + L P++ P NP
Sbjct: 287 THISLDHHSMTLTPDEVKSLL---LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343
Query: 307 ----------------KSLVTALSP------------LQKETEVPSHVL----------- 327
+S + L P +P+ +L
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD 403
Query: 328 ----MGIPHSASVSPLSP-----------LGEACSRRDLTAIH-EILEKISYKDDEGVAN 371
+ H S+ P L + A+H I++ Y + +
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH--YNIPKTFDS 461
Query: 372 ELSFQMWTDQ---------MQETLNSKKKG-------DVAF-RQK--------------- 399
+ + DQ ++ + ++ D F QK
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 400 -DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP---IWHI 455
L+ ++ Y +I P Y R + ++ +P+ N I S + I
Sbjct: 522 NTLQQ-LKFYKPYI---CDNDPK-YERL-VNAILDFLPKIEEN-----LICSKYTDLLRI 570
Query: 456 ASYLQAAALSAMGMENEAQVA 476
A L A A+ E QV
Sbjct: 571 A--LMAED-EAIFEEAHKQVQ 588
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 45/254 (17%), Positives = 94/254 (37%), Gaps = 35/254 (13%)
Query: 75 VVYKGKLENQRRIAVKR--FNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 130
V++ E ++ A+K + E + +L+ ++++ L D+
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 101
Query: 131 RL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 188
+ +V E + L L ++ ++ +A+ G + H DL
Sbjct: 102 YIYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPA 156
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP----PEYLR-----------TGR 231
L DG +L FG+ + + + T PE ++ +
Sbjct: 157 NFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290
++P+S ++S G +L + GK P ++ I L + D E +F D +L
Sbjct: 216 ISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQD 271
Query: 291 LASRCLQYEPRERP 304
+ CL+ +P++R
Sbjct: 272 VLKCCLKRDPKQRI 285
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 46/271 (16%), Positives = 81/271 (29%), Gaps = 34/271 (12%)
Query: 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNL 121
IV K + E P + + ++ N
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT 123
Query: 122 LGCCCEGDERLL---VAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSK 177
+G ++ + E L + + + + L + + +A+A+E+ SK
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK 183
Query: 178 GRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-T 233
G ++ DL N I F D ++ FGL+ + T L P TG+V T
Sbjct: 184 G-LMHRDLKPSN---IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239
Query: 234 P---------------ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ I+S G +L +LL + RNL+
Sbjct: 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLF---- 295
Query: 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ + L P ERP +
Sbjct: 296 ---TQKYPQEHMMVQDMLSPSPTERPEATDI 323
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-07
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K G+ A++QKD + A Y + I+ + T Y ++ Y + + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+ L A A+S G + Q L
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSL 101
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 2e-07
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 17/176 (9%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
L+ E+ P L K L + + + LA AL YC + + H D+ +L
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALHYCHERK--VIHRDIKPENLL 146
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
G +++ FG ++ + + L + PPE + + ++ G L + L
Sbjct: 147 MGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER 303
G PP + + L S+ L+Y P +R
Sbjct: 207 VGM--PPFD------SPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 254
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 16/191 (8%)
Query: 76 VYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
VY+ + +R +A+K + DP + EAR+ G+L+ + + +
Sbjct: 50 VYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRI 190
+ + LA L P+ + +V + AL+ + G H D+ I
Sbjct: 110 YVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENI 165
Query: 191 LFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLL 245
L D L FG+ + D K L + PE T + IY+ +L
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVL 225
Query: 246 LDLLSGKHIPP 256
+ L+G PP
Sbjct: 226 YECLTGS--PP 234
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 2e-07
Identities = 50/282 (17%), Positives = 91/282 (32%), Gaps = 46/282 (16%)
Query: 76 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDER-- 131
VY+ + + + R A+KR R ++E + +L + + G E
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103
Query: 132 ------LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-D 184
LL+ E + + P+ L++ +A+++ + + H D
Sbjct: 104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD 163
Query: 185 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF------------TP----PEYLR 228
L +L G +L FG YS + TP PE +
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223
Query: 229 TGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT---- 281
+ + I++ G +L L +H P +R + G+++
Sbjct: 224 LYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLR----------IVNGKYSIPPH 271
Query: 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 323
D T L LQ P ER + +V L + V
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 17/176 (9%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
L+ EY P T+ + L + + LA AL YC SK + H D+ +L
Sbjct: 86 LILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR--VIHRDIKPENLL 141
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
G +++ FG ++ + L + PPE + + ++S G L + L
Sbjct: 142 LGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER 303
GK PP Q +FT D L SR L++ P +R
Sbjct: 202 VGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 249
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 440
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 441 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+D A + A Y + +G + ++E
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRE 236
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
+ G L DA+ + +D + Y RR+ +L + AL D +
Sbjct: 30 LELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+ + A + L G +EA+ K+
Sbjct: 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 119
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 437
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 438 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+A+ + + P A +A A M +EA +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYET 354
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 63/276 (22%), Positives = 100/276 (36%), Gaps = 49/276 (17%)
Query: 69 GEKAPNVVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC 126
G A VV + ++A+KR N + L+E +++ Q + + +
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV 83
Query: 127 EGDERLLVAEYMPN---ETLAKHLFHWETHPMKW------AMRLRVVLHLAQALEYCTSK 177
DE LV + + + KH+ H A LR VL + LEY
Sbjct: 84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL---EGLEYLHKN 140
Query: 178 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVT---- 233
G+ ++ D+ A IL EDG+ +++ FG S LA R T
Sbjct: 141 GQ-IHRDVKAGNILLGEDGSVQIADFG----------VSAFLATGGDITRNKVRKTFVGT 189
Query: 234 -----PESV-----------IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTD 273
PE + I+SFG ++L +G PP L L + L
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ + G ++ S CLQ +P +RP L
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-07
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K+ G+ A+++KD A++ Y + + + T ++ Y +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+ A A + +G + K+
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 52/272 (19%), Positives = 87/272 (31%), Gaps = 56/272 (20%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARS-VGQLRNNRLT---NL--LGCCCEG 128
VV++G + + AVKR F + A + L N+ C
Sbjct: 31 VVFQGSFQGRPV-AVKRMLI-------DFCDIALMEIKLLT--ESDDHPNVIRYYCSETT 80
Query: 129 DERL-LVAEYMPNE----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183
D L + E +K++ K + ++ +A + + S + H
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIH 138
Query: 184 -DLNAYRILFD-------------EDGNPRLSTFGLMKNSRDGKSYSTNLAFTP------ 223
DL IL E+ +S FGL K G+S P
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGW 198
Query: 224 --PEYLR-------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--LT 272
PE L R+T I+S G + +LS P R+ N+ +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIRGIFS 256
Query: 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
++ E L S+ + ++P +RP
Sbjct: 257 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 6e-07
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 75 VVYKGKLENQRRIAVKR--FNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 130
V++ E ++ A+K + E + +L+ ++++ L
Sbjct: 24 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 84 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 138
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TP----PEYLR-----------TGRV 232
L DG +L FG+ + + + T PE ++ ++
Sbjct: 139 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197
Query: 233 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 198 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 253
Query: 292 ASRCLQYEPRERP 304
CL+ +P++R
Sbjct: 254 LKCCLKRDPKQRI 266
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 440
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 441 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+D A + A Y + +G + ++E
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRE 213
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 445
+ G L DA+ + +D P Y RR+ +L + AL D +
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 446 AQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+ + A + L G +EA+ K+
Sbjct: 63 VIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 96
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 437
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 438 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 473
+A+ + + P A +A A M +EA
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEA 325
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 9e-07
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 30/201 (14%)
Query: 76 VYKGK-LENQRRIAVK----RFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLL--GCC 125
V+ + L + R +AVK R DP +F EA++ L + + + G
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLAR----DPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 83
Query: 126 CEGDERL--LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183
L +V EY+ TL + PM + V+ QAL + G + H
Sbjct: 84 ETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG--IIH 139
Query: 184 -DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPE 235
D+ I+ ++ FG+ + D + T + PE R V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 236 SVIYSFGTLLLDLLSGKHIPP 256
S +YS G +L ++L+G+ PP
Sbjct: 200 SDVYSLGCVLYEVLTGE--PP 218
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 9e-07
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 75 VVYKGKLENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 130
V++ E ++ A+K N + E + +L+ ++++ L
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 189
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 131 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 185
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP----PEYLR-----------TGRV 232
L DG +L FG+ + + + PE ++ ++
Sbjct: 186 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 233 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 292 ASRCLQYEPRERP 304
CL+ +P++R
Sbjct: 301 LKCCLKRDPKQRI 313
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 41/283 (14%)
Query: 76 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDE 130
V + L + A+KR D + EA + + L+ C E
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-DLNA 187
L+ + TL + + L ++L + + LE +KG H DL
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKP 162
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTG----------------R 231
IL ++G P L G M + S +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 232 VTPESVIYSFGTLLLDLLSGKH-----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
+ + ++S G +L ++ G+ ++ L L + +
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRH--------SS 274
Query: 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET--EVPSHVL 327
L +L + + +P +RP+ L++ L LQ + + +L
Sbjct: 275 ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQIL 317
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
+ E+ TL + + + + L + + + ++Y SK L + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLD 247
+ ++ FGL+ + ++ + + T PE + + E +Y+ G +L +
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 248 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307
LL D +G +D + L + L +P +RPN
Sbjct: 214 LLHVCD-TAFETSKFFTD---------LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTS 263
Query: 308 SL 309
+
Sbjct: 264 EI 265
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 29/266 (10%), Positives = 67/266 (25%), Gaps = 47/266 (17%)
Query: 75 VVYKGK------LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN---LLGCC 125
VY+ +N+++ +K +P +F + + +L+ +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136
Query: 126 CEGDERLLVAEYMPNETL---AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA-- 180
+ +LV E TL + M + + + + +E
Sbjct: 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG 196
Query: 181 --------LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY-- 226
L + D L G S D K + FT +
Sbjct: 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQC 253
Query: 227 --LRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283
+ + + + + + +L G ++ +++ + + D
Sbjct: 254 VEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLD 306
Query: 284 DGTELVRLASRCLQYEPRERPNPKSL 309
E L L
Sbjct: 307 MWNEFFH---VMLNIPDCHHLPSLDL 329
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 42/265 (15%), Positives = 78/265 (29%), Gaps = 43/265 (16%)
Query: 75 VVYKG-KLENQRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNR-LTNLLGCCCEGDE 130
V+K K + A+KR + + L E + L + + E D
Sbjct: 26 SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85
Query: 131 RLLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 187
L+ EY +LA + + K A ++L + + L Y S L H D+
Sbjct: 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKP 143
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-F--------------TP----PEYLR 228
I P ++ ++ + E L+
Sbjct: 144 SNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ 203
Query: 229 -TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDD 284
P++ I++ ++ + P D IR L + +
Sbjct: 204 ENYTHLPKADIFALALTVVCAAGAE--PLPRNGDQWHEIRQGRL-----PRIPQVLSQ-- 254
Query: 285 GTELVRLASRCLQYEPRERPNPKSL 309
E L + +P RP+ +L
Sbjct: 255 --EFTELLKVMIHPDPERRPSAMAL 277
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 41/173 (23%)
Query: 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD-EDGN 197
E ++ F + A+++C S+G + H D+ IL D G
Sbjct: 137 GEGPSRCFFG----------------QVVAAIQHCHSRG--VVHRDIKDENILIDLRRGC 178
Query: 198 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 253
+L FG D Y+ ++PPE++ + + ++S G LL D++ G
Sbjct: 179 AKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237
Query: 254 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 304
P I LE + + L RCL +P RP
Sbjct: 238 --PFERDQEI------------LEAELHFPAHVSPDCCALIRRCLAPKPSSRP 276
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 35/214 (16%)
Query: 108 RSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH 166
+ + + N+R L E + L LV M L H++H A R V +
Sbjct: 235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFY 291
Query: 167 LAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-- 221
A+ LE + +Y DL IL D+ G+ R+S GL + +G++
Sbjct: 292 AAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVG 347
Query: 222 TPPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 271
T Y+ PE V + G LL ++++G+ P + + +
Sbjct: 348 T-VGYM-----APEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEV 397
Query: 272 TDSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 303
E +++ + L S+ L +P ER
Sbjct: 398 ERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 41/173 (23%)
Query: 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED-GN 197
E LA+ F + +A+ +C + G + H D+ IL D + G
Sbjct: 147 QEELARSFFW----------------QVLEAVRHCHNCG--VLHRDIKDENILIDLNRGE 188
Query: 198 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 253
+L FG +D Y+ ++PPE++R R + ++S G LL D++ G
Sbjct: 189 LKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 254 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 304
P + I + GQ +E L CL P +RP
Sbjct: 248 --PFEHDEEI------------IRGQVFFRQRVSSECQHLIRWCLALRPSDRP 286
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 6e-06
Identities = 42/193 (21%), Positives = 66/193 (34%), Gaps = 24/193 (12%)
Query: 122 LGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSK 177
+ ++L + + M L HL + + A+ LE+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNR 311
Query: 178 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVT 233
+Y DL IL DE G+ R+S GL + K ++ T PE L+ G
Sbjct: 312 F-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQKGVAY 368
Query: 234 PESVIY-SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVR 290
S + S G +L LL G P ++ + L D EL
Sbjct: 369 DSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 291 LASRCLQYEPRER 303
L LQ + R
Sbjct: 424 LLEGLLQRDVNRR 436
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 6e-06
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 167 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNL--- 219
L LEY S+G + H D+ +L G ++S G+ + + T+
Sbjct: 118 LIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 220 AFTPPEYLRTGRV--TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 277
AF PPE + I+S G L ++ +G P N+ L ++ +
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG-LYP-------FEGDNIYKLFENIGK 227
Query: 278 GQFT--DDDGTELVRLASRCLQYEPRER 303
G + D G L L L+YEP +R
Sbjct: 228 GSYAIPGDCGPPLSDLLKGMLEYEPAKR 255
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 7e-06
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K +G+ F K+ +AI+ Y I+ P Y+ S CY+ + + + +A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALK 478
I P A +A+A ++G +A L
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 8e-06
Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 18/179 (10%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
LV E N + ++L P + + + Y S G + H DL +L
Sbjct: 88 LVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLL 144
Query: 192 FDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
+ N +++ FGL + + + T + PE ES ++S G +
Sbjct: 145 LTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYT 204
Query: 248 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRERP 304
LL G+ PP ++ + + + E L + L+ P +R
Sbjct: 205 LLIGR--PPFD------TDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRL 255
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 32/160 (20%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 217
R++ + + Y + H DL +L +D N R+ FGL + K
Sbjct: 130 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 218 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
T PE L G + ++S G +L LLSG PP + N +
Sbjct: 188 -KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILK 237
Query: 274 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 304
+G++T + +L+R + L Y P R
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIR---KMLTYVPSMRI 274
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 9e-06
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 167 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAF 221
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 124 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 222 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 233
Query: 282 --DDDGTELVRLASRCLQYEPRERPNPKSLV 310
L + LQ +P RP L+
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELL 264
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 46/275 (16%), Positives = 76/275 (27%), Gaps = 29/275 (10%)
Query: 68 HGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPR--QFLEEARSVGQLRNNRLTNLLGC 124
G + V + + V+R N A + E + +
Sbjct: 35 KGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT 94
Query: 125 CCEGDERLLVAEYMPNETLAKHLFHWETHPMK---WAMRLRVVLHLAQALEYCTSKGRAL 181
+E +V +M + + M A L+ VL +AL+Y G
Sbjct: 95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL---KALDYIHHMGYV- 150
Query: 182 YH-DLNAYRILFDEDGNPRLSTFGL-------MKNSRDGKSYSTNLAFTP----PEYLRT 229
H + A IL DG LS + R + PE L+
Sbjct: 151 -HRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 209
Query: 230 GRV--TPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283
+S IYS G +L +G +P + L + + L D+
Sbjct: 210 NLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELT 269
Query: 284 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318
S P P + + P +
Sbjct: 270 MSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR 304
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRL------RVVLHLAQALEYCTSKGRALYH-DL 185
++ EYM N+++ K ++ + + ++ + + Y ++ + + H D+
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDV 178
Query: 186 ---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYL--RTGRVTPESVI 238
N IL D++G +LS FG + D K + F PPE+ + + I
Sbjct: 179 KPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235
Query: 239 YSFGTLLLDLLSGKHIPP 256
+S G L + P
Sbjct: 236 WSLGICLYVMFYNV--VP 251
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 32/160 (20%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 217
++ + + Y + H DL +L ++D ++ FGL + K
Sbjct: 140 VIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE 197
Query: 218 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
T PE LR + + ++S G +L LL+G PP + Q +
Sbjct: 198 -RLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILR 247
Query: 274 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 304
+G++T + +L++ + LQ++ + R
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIK---QMLQFDSQRRI 284
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 32/160 (20%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 217
++ + + Y + H D+ IL + N ++ FGL
Sbjct: 150 NIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 218 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
T PE L+ + + ++S G ++ LL G PP +N Q +
Sbjct: 208 -RLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PPFGG------QNDQDIIK 257
Query: 274 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 304
+G++ D+ EL++ L Y+ +R
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRC 294
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 167 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYST---NLAF 221
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 150 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 207
Query: 222 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 259
Query: 282 --DDDGTELVRLASRCLQYEPRERPNPKSLV 310
L + LQ +P RP L+
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELL 290
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 30/213 (14%)
Query: 108 RSVGQLRNNR-LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVL 165
+ + ++R + +L E L LV M + H+++ + + R +
Sbjct: 236 KKILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIF 293
Query: 166 HLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 222
+ AQ LE+ + +Y DL +L D+DGN R+S GL + G++ + A T
Sbjct: 294 YTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 223 PPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
P ++ PE ++ + G L ++++ + P A + L
Sbjct: 353 -PGFM-----APELLLGEEYDFSVDYFALGVTLYEMIAAR--GPFRARG--EKVENKELK 402
Query: 273 DSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 303
LE + D LQ +P +R
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 18/141 (12%)
Query: 359 EKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQ-------- 410
E + ++ + + + + +++Q + K++G+ F++ ++ +AI Y +
Sbjct: 15 ENLYFQGAKKSIYDYTDE---EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71
Query: 411 -------FIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463
+D + + + CY + A++ A + I A Y A
Sbjct: 72 EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVA 131
Query: 464 LSAMGMENEAQVALKEGTTLE 484
G EA+ L + +L
Sbjct: 132 NMYFGFLEEAKENLYKAASLN 152
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 40/165 (24%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 217
+++ L + + + H DL N IL D+D N +L+ FG G+
Sbjct: 128 KIMRALLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 218 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 267
+ TP PE + E ++S G ++ LL+G PP R
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRK 233
Query: 268 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 303
++ + G + D +LV R L +P++R
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 46/250 (18%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 69 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
GE + VYK E + +A+K+ + D ++ ++E + Q + + G +
Sbjct: 38 GEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
+ +V EY +++ + + ++ + LEY + ++ D+ A
Sbjct: 96 NTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-IHRDIKA 153
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL + +G+ +L+ FG+ D + + TP PE ++ + I+S G
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGI 213
Query: 244 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
+++ GK I P A+ +I ++D +CL
Sbjct: 214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKP---ELWSD----NFTDFVKQCLVKS 266
Query: 300 PRERPNPKSL 309
P +R L
Sbjct: 267 PEQRATATQL 276
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 32/160 (20%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 217
R++ + A+ YC + H DL LF D +L FGL + GK T
Sbjct: 110 RIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 218 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
TP P+ L G PE +S G ++ LL G PP +
Sbjct: 168 -KVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVML 217
Query: 274 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 304
EG FT L+R R L P++R
Sbjct: 218 KIREGTFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRI 254
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K +G+ ++ + +AIE Y + + T R+ + A++ A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491
+ + + + +G LK+ T+E + S
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKK--TIEYYQKSLT 107
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 391 KGDVAFRQKDLKDAIECYTQFI-----DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 445
+G F + D +A++ YT+ I DA Y+ R+ +A+ D +
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADCNK 198
Query: 446 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL-----EAKKN 488
A P + A +A A A+ A L T
Sbjct: 199 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA 246
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 34/164 (20%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF-DEDGNP---RLSTFGLMKNSRDGK 213
V+ + + +EY ++G H DL N IL+ DE GNP R+ FG K R
Sbjct: 120 AVLFTITKTVEYLHAQGVV--HRDLKPSN---ILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 214 SYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269
+T PE L I+S G LL +L+G P D +
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPE 229
Query: 270 MLTDSCLEGQFTDDDGT---------ELVRLASRCLQYEPRERP 304
+ G+F+ G +LV + L +P +R
Sbjct: 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVS---KMLHVDPHQRL 270
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 5e-05
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------------TV 422
D+++ ++KG+ F QKD K+AI+ Y +D + +
Sbjct: 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL 65
Query: 423 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 482
YA S CYL +A + + A + +A A A +EA+ LK
Sbjct: 66 YANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125
Query: 483 LE 484
Sbjct: 126 NH 127
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 6e-05
Identities = 13/111 (11%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Query: 370 ANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL 428
+ + M + +TL ++ +DA + +
Sbjct: 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGA 63
Query: 429 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
C A++ ++ + A L G EA+ L
Sbjct: 64 CRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFL 114
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 23/245 (9%)
Query: 75 VVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
V+KG Q+ +A+K + A + +E + Q + +T G + +
Sbjct: 37 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 96
Query: 133 LVAEYMPNETLAKHLFHWETHPMKW-AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
++ EY+ + L A LR +L + L+Y S+ + ++ D+ A +L
Sbjct: 97 IIMEYLGGGSAL-DLLEPGPLDETQIATILREIL---KGLDYLHSEKK-IHRDIKAANVL 151
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLD 247
E G +L+ FG+ D + TP PE ++ ++ I+S G ++
Sbjct: 152 LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
Query: 248 LLSGKHIPPSHALDLIRDRNLQMLTDS---CLEGQFTDDDGTELVRLASRCLQYEPRERP 304
L G+ PP L ++ L ++ + LEG ++ L CL EP RP
Sbjct: 212 LARGE--PPHSELHPMK--VLFLIPKNNPPTLEGNYSK----PLKEFVEACLNKEPSFRP 263
Query: 305 NPKSL 309
K L
Sbjct: 264 TAKEL 268
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-05
Identities = 12/107 (11%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 374 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 432
+ M ++TL G ++ DA + + + C
Sbjct: 6 TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQS 64
Query: 433 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+ + AL ++ + A +G + A+
Sbjct: 65 LGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYS 111
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 167 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 222
+ A++YC + H DL +L D N +++ FGL DG+ T + +
Sbjct: 120 ILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 223 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280
PE + GR PE I+S G +L LL G +P D ++ L G F
Sbjct: 178 APEVIS-GRLYAGPEVDIWSCGVILYALLCG-TLP-------FDDEHVPTLFKKIRGGVF 228
Query: 281 T--DDDGTELVRLASRCLQYEPRER 303
+ + L LQ +P +R
Sbjct: 229 YIPEYLNRSVATLLMHMLQVDPLKR 253
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 31/159 (19%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 217
++ + AL Y S+ + H DL ILF ++ FGL + + + +
Sbjct: 128 ELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 218 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
T PE + VT + I+S G ++ LL+G P +L+ +
Sbjct: 186 AAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEVQQ 235
Query: 274 SCLEGQFT--------DDDGTELVRLASRCLQYEPRERP 304
+ +L++ + L +P RP
Sbjct: 236 KATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 8e-05
Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 23/248 (9%)
Query: 76 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VYK K E A K + + ++ E + + + LLG + ++
Sbjct: 35 VYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
E+ P + + + V + +AL + SK ++ DL A +L
Sbjct: 95 IEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI-IHRDLKAGNVLMTL 152
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE-----YLRTGRVTPESVIYSFGTLL 245
+G+ RL+ FG+ + + TP PE ++ ++ I+S G L
Sbjct: 153 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 212
Query: 246 LDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
+++ + + P L I + L +++ E L P
Sbjct: 213 IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT---PSKWSV----EFRDFLKIALDKNPE 265
Query: 302 ERPNPKSL 309
RP+ L
Sbjct: 266 TRPSAAQL 273
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 9e-05
Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 53/251 (21%)
Query: 75 VVYKGK--LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER 131
+Y N R + +K + + + E + + ++ + + + D
Sbjct: 95 WIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154
Query: 132 L-----LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL- 185
+V EY+ ++L + + A + +L + AL Y S G +Y+DL
Sbjct: 155 GDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLK 209
Query: 186 --NAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFG 242
N I+ E+ +L G + + G Y T F PE +R T + IY+ G
Sbjct: 210 PEN---IMLTEEQ-LKLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDIYTVG 263
Query: 243 TLLLDLLSG---------KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293
L L +P + D RL
Sbjct: 264 RTLAALTLDLPTRNGRYVDGLPEDDPVLKTYD---------------------SYGRLLR 302
Query: 294 RCLQYEPRERP 304
R + +PR+R
Sbjct: 303 RAIDPDPRQRF 313
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 32/160 (20%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 217
R++ + + Y + H DL IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 218 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
T PE LR G + ++S G +L LLSG PP + +N +
Sbjct: 183 -RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFY------GKNEYDILK 232
Query: 274 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 304
G++ DD +L+R + L + P R
Sbjct: 233 RVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 28/173 (16%)
Query: 102 QFLEEARSVGQLRNNR-LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETH-PMKWA 158
F EE R V + R +T L + + L LV EY L L + P + A
Sbjct: 107 CFREE-RDVLVNGDRRWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 159 MRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKS 214
+LA+ A++ G ++ D+ IL D G+ RL+ FG +K DG
Sbjct: 165 -----RFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 215 YSTNLAFTP----PEYLRTGRVTPESVIY-------SFGTLLLDLLSGKHIPP 256
S TP PE L+ P + Y + G ++ G+ P
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ--TP 269
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 170 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPE 225
A+EYC + H DL +L D++ N +++ FGL DG T + + PE
Sbjct: 120 AIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 226 YLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 281
+ G+ PE ++S G +L +L G +P D + L +
Sbjct: 178 VIN-GKLYAGPEVDVWSCGIVLYVMLVG-RLP-------FDDEFIPNLFKKVNSCVYVMP 228
Query: 282 DDDGTELVRLASRCLQYEPRER 303
D L R + +P +R
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQR 250
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 40/165 (24%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 217
++ L +A+ + + + H DL N IL D++ RLS FG + G+
Sbjct: 204 SIMRSLLEAVSFLHANN--IVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRE 258
Query: 218 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 267
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 -LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRR 309
Query: 268 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 303
++ +EGQ+ +L+ R LQ +P R
Sbjct: 310 QILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 36/163 (22%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF---DEDGNPRLSTFGLMKNSRDGKS 214
R++ + + Y + H DL N IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPEN---ILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 215 YSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 270
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 180 MKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KNEYD 229
Query: 271 LTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 304
+ G++ DD +L+R + L + P R
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 374 SFQMWTDQMQETLNSKK-KGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------- 420
S++M +++ E K +G V F++ K A+ Y + +++ + S
Sbjct: 135 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 194
Query: 421 --TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 478
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 254
Query: 479 EGTTLE 484
+ L
Sbjct: 255 KVLQLY 260
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 45/231 (19%), Positives = 83/231 (35%), Gaps = 32/231 (13%)
Query: 162 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 217
++ + +A++Y S A H D+ +L+ + +L+ FG K + S +T
Sbjct: 165 EIMKSIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 218 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
+TP PE L + ++S G ++ LL G PP ++ +
Sbjct: 223 -PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNH--GLAISPGMKT 277
Query: 274 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVTALS-P-LQKETEV 322
GQ+ ++ L+R L+ EP +R ++ P + + T+V
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTITE---FMNHPWIMQSTKV 331
Query: 323 PSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANEL 373
P L + L + E+I K E +N L
Sbjct: 332 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPL 382
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 2e-04
Identities = 10/140 (7%), Positives = 39/140 (27%), Gaps = 4/140 (2%)
Query: 356 EILEKISYKDDEGVANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDA 414
E IS + + + + + + ++ + + +++A +
Sbjct: 6 TENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY 65
Query: 415 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 474
+ + Y + + Q A + A + + + + +A+
Sbjct: 66 DFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAK 124
Query: 475 VALKEGTTLEAKKNSTAGQK 494
+ ++ + K
Sbjct: 125 ECFEL--VIQHSNDEKLKIK 142
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 16/146 (10%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 223
L AL+Y ++ ++ D+ IL DE G+ ++ F + +T +A T
Sbjct: 124 LVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTKPYM 181
Query: 224 -PEYLRTGRVTPESVI---YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG- 278
PE + + S +S G +LL G+ P H + + + +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSSKEIVHTFETTV 236
Query: 279 -QFTDDDGTELVRLASRCLQYEPRER 303
+ E+V L + L+ P +R
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 42/205 (20%)
Query: 118 LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEY 173
LT L + +RL V EY L HL R + A+ AL+Y
Sbjct: 210 LTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGAEIVSALDY 263
Query: 174 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAF--TPPEYLRTG 230
S+ +Y DL ++ D+DG+ +++ FGL K +DG + T F T PEYL
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL--- 316
Query: 231 RVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG-- 278
PE + G ++ +++ G+ P +++ + L + L
Sbjct: 317 --APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEI 366
Query: 279 QFTDDDGTELVRLASRCLQYEPRER 303
+F G E L S L+ +P++R
Sbjct: 367 RFPRTLGPEAKSLLSGLLKKDPKQR 391
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 167 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN----LAF 221
L + +EY + + H D+ +L EDG+ +++ FG+ + + +N AF
Sbjct: 146 LIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 222 TPPEYLRTGRVT---PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
PE L R +++ G L + G P D + L
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFG-QCP-------FMDERIMCLHSKIKSQ 255
Query: 279 QFT----DDDGTELVRLASRCLQYEPRER 303
D +L L +R L P R
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDKNPESR 284
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-04
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 170 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAFTP 223
++YC + H DL +L D N +++ FGL DG+ T N A
Sbjct: 128 GVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA-- 183
Query: 224 PEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281
PE + GR PE I+S G +L LL G +P D ++ L +G F
Sbjct: 184 PEVIS-GRLYAGPEVDIWSSGVILYALLCG-TLP-------FDDDHVPTLFKKICDGIFY 234
Query: 282 --DDDGTELVRLASRCLQYEPRER 303
++ L LQ +P +R
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKR 258
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 5e-04
Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 26/204 (12%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-------- 125
V + + ++A+K+ + P R+ + ++ N++
Sbjct: 29 YVLRWIHQDTGEQVAIKQCRQELSPKNRERWC--LEIQIMKKLNHPNVVSAREVPDGLQK 86
Query: 126 -CEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183
D LL EY L K+L +K ++ ++ AL Y + H
Sbjct: 87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIH 144
Query: 184 -DLNAYRILFDEDGNPR---LSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE 235
DL I+ + G K G+ + + T PE L + T
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG-TLQYLAPELLEQKKYTVT 203
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHA 259
+SFGTL + ++G P
Sbjct: 204 VDYWSFGTLAFECITGF--RPFLP 225
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 48/253 (18%), Positives = 89/253 (35%), Gaps = 31/253 (12%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
+VY G+ L NQ RIA+K + EE L++ + LG E +
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI 96
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRL--RVVLHLAQALEYCTSKGRALYH-DLNAYRI 190
E +P +L+ L + P+K + + + L+Y H D+ +
Sbjct: 97 FMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV--HRDIKGDNV 153
Query: 191 LFD-EDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRV--TPESVIYSFGT 243
L + G ++S FG K + T PE + G + I+S G
Sbjct: 154 LINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQML-----TDSC--LEGQFTDDDGTELVRLASRCL 296
++++ +GK PP + L + + + + + +C
Sbjct: 214 TIIEMATGK--PPFYEL----GEPQAAMFKVGMFKVHPEIPESMS-AEAKAFIL---KCF 263
Query: 297 QYEPRERPNPKSL 309
+ +P +R L
Sbjct: 264 EPDPDKRACANDL 276
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 7e-04
Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 26/257 (10%)
Query: 79 GKLENQRRIAVKRF--NRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136
G L R F + RQ + ++ RL ++ + +
Sbjct: 112 GNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171
Query: 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196
+ + + + + +A+ +E+ S+ + ++ DL A IL E
Sbjct: 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKN 230
Query: 197 NPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
++ FGL ++ Y + PE + T +S ++SFG LL ++ S
Sbjct: 231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Query: 251 GKHIP------PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
P +++ +M D E+ + C EP +R
Sbjct: 291 LGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTTP---------EMYQTMLDCWHGEPSQR 340
Query: 304 PNPKSLVTALSPLQKET 320
P LV L L +
Sbjct: 341 PTFSELVEHLGNLLQAN 357
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.97 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.94 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.86 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.83 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.79 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.77 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.75 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.74 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.73 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.72 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.72 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.71 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.7 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.69 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.63 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.63 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.62 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.62 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.62 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.61 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.61 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.61 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.6 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.6 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.59 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.58 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.58 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.57 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.57 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.57 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.57 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.57 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.57 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.57 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.57 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.56 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.56 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.55 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.54 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.51 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.51 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.51 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.49 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.49 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.49 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.48 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.47 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.47 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.46 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.44 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.42 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.42 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.42 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.41 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.39 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.37 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.37 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.36 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.36 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.36 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.36 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.36 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.35 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.34 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.34 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.33 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.32 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.32 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.32 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.32 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.31 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.31 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.31 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.31 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.3 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.3 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.3 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.29 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.29 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.29 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.29 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.29 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.29 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.28 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.28 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.28 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.28 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.28 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.27 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.27 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.27 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.26 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.26 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.25 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.25 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.24 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.24 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.23 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.23 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.23 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.22 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.22 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.22 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.21 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.21 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.21 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.21 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.2 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.2 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.2 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.2 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.2 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.2 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.2 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.19 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.15 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.14 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.12 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.12 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.11 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.11 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.11 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.11 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.1 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.1 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.09 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.09 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.09 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.09 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.09 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.08 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.08 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.08 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.08 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.08 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.07 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.07 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.07 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.06 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.06 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.06 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.06 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.06 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.05 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.04 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.04 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.03 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.03 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.02 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.02 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.02 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.02 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.01 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.0 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.0 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 98.99 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.99 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.99 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.98 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.98 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.98 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 98.97 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.97 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.97 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.96 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 98.95 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.95 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.95 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.94 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.94 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.93 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.93 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.92 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.92 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.91 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.88 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.87 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.87 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.86 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.86 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.85 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.84 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.84 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.84 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.83 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.82 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.81 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.79 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.79 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.79 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.78 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.75 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.69 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.66 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.66 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.65 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.63 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.63 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.59 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.56 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.54 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.54 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.52 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.46 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.46 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.43 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.43 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.41 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.37 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.37 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.36 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.35 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.29 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.26 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.23 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.22 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.17 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.13 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.08 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.05 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.0 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.94 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.94 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.93 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.91 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.87 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.87 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.86 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.86 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.8 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.76 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.74 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.7 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.7 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.69 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.68 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.68 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.63 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.6 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.53 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.37 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.37 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.35 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.34 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.26 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.26 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.24 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-57 Score=435.09 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=206.6
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+++..+.++||+|+||+||+|++.+ .||||+++..... ..+.|.+|+.++++++|||||+++|++.. +.++||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4566778889999999999998643 5999999754322 24679999999999999999999999865 56899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
||+||+|.+++.. ...++++..+..|+.||+.||.|||+++ ||||||||+||||++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 112 WCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred cCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999964 3457999999999999999999999999 99999999999999999999999999986532
Q ss_pred -CCccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-HhhhccccccccccccCCCCchhHH
Q 011092 212 -GKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 212 -~~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
.....||+.|||||++.+ ++++.++|||||||+||||+||+.||...... .+..........+. ....+..++.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 268 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCPK 268 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-STTSCTTSCH
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cccccccchH
Confidence 234579999999999863 45899999999999999999999998653221 11111111111111 1234556778
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+.+|+.+||+.||.+|||+.+|++.|+.++..
T Consensus 269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999887643
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-57 Score=437.92 Aligned_cols=253 Identities=21% Similarity=0.264 Sum_probs=211.9
Q ss_pred CccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
++..+++++||+|+||+||+|.+. +++.||||+++..... ..+.|.+|+.++++++|||||+++|+|.+++..
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 345667788999999999999862 4678999999764433 367899999999999999999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 197 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~ 197 (494)
+||||||++|+|.++|.... ...+++..++.|+.||+.||+|||+++ ||||||||+||||+++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCC
Confidence 99999999999999996422 246899999999999999999999999 999999999999999999
Q ss_pred eEEcccCCcccCCC------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccc
Q 011092 198 PRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 270 (494)
Q Consensus 198 ~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 270 (494)
+||+|||+++.... .....||+.|||||++.++.++.++|||||||+||||+| |..||.+.....+.......
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~ 263 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 263 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999985432 234568999999999999999999999999999999999 78888765443332221111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.....|..++..+.+|+.+||+.||.+|||+.+|++.|+.+.
T Consensus 264 -----~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 264 -----QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -----CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 111235567789999999999999999999999999998763
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-58 Score=439.08 Aligned_cols=253 Identities=24% Similarity=0.301 Sum_probs=211.8
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++.+.+.||+|+||+||+|.+. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 4556788899999999999853 4678999999865544467899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhccc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEccc
Q 011092 135 AEYMPNETLAKHLFHW-----------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 203 (494)
||||+||+|.++|... ....+++..++.|+.||+.||.|||+++ ||||||||+||||++++.+||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999642 2357999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccc
Q 011092 204 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 276 (494)
Q Consensus 204 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
|+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||.......+....... .
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~-----~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG-----R 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-----C
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----C
Confidence 999854332 23457899999999999999999999999999999999 89888765433332221111 1
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
....|..++.++.+|+.+||+.||.+|||+.+|++.|+.+.+.
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1234556778999999999999999999999999999987654
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-57 Score=441.16 Aligned_cols=253 Identities=23% Similarity=0.293 Sum_probs=208.4
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+..+.++||+|+||+||+|.+. +++.||||+++.......+.|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4456678899999999999864 4788999999865544467899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEc
Q 011092 135 AEYMPNETLAKHLFHWE-------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~ 201 (494)
||||+||+|.+++.... ..++++.+++.|+.||+.||.|||+++ ||||||||+||||++++.+||+
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEEC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEc
Confidence 99999999999997432 246999999999999999999999999 9999999999999999999999
Q ss_pred ccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccc
Q 011092 202 TFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 274 (494)
Q Consensus 202 Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 274 (494)
|||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||.......+.......
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g---- 276 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG---- 276 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT----
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC----
Confidence 99999865332 23568999999999999999999999999999999999 89888765433222211111
Q ss_pred cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 275 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.....|..+++++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 277 -~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 -RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11234556778999999999999999999999999999988654
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-57 Score=439.70 Aligned_cols=246 Identities=17% Similarity=0.213 Sum_probs=207.2
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+.|++++.||+|+||+||+|+. .+|+.||||++...... ..+.|.+|+.+|++|+|||||++++++.+++.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788999999999999999995 56999999999765432 25679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
||+||+|.+++.......+++..++.|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999999997655667899999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
....||+.|||||++.+..|+.++|||||||++|||+||+.||.......+......... ...+..++.++.+||
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHHHH
Confidence 245799999999999999999999999999999999999999987654433332222111 123445678999999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.||.+|||+.++++
T Consensus 258 ~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999986
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-57 Score=437.18 Aligned_cols=250 Identities=19% Similarity=0.264 Sum_probs=213.7
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.++++++||+|+||+||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+|||||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 478888999999999999995 4699999999976655567789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
||+|.+++.+ ..+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .+.
T Consensus 155 gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 230 (346)
T 4fih_A 155 GGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 230 (346)
T ss_dssp TEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred CCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence 9999999863 56999999999999999999999999 999999999999999999999999999865432 356
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
+||+.|||||++.+..|+.++|||||||++|||++|+.||................. .....+..+++++.+||.+|
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CCCSCGGGSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCCccccCCHHHHHHHHHH
Confidence 899999999999999999999999999999999999999976543332222111111 11122345678999999999
Q ss_pred ccCCCCCCCChHHHHHHhcccccc
Q 011092 296 LQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
|+.||.+|||+.++++ ..+...
T Consensus 308 L~~dP~~R~ta~e~l~--Hp~~~~ 329 (346)
T 4fih_A 308 LVRDPAQRATAAELLK--HPFLAK 329 (346)
T ss_dssp SCSSTTTSCCHHHHTT--CGGGGG
T ss_pred cCCChhHCcCHHHHhc--CHhhcC
Confidence 9999999999999987 455443
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-56 Score=476.34 Aligned_cols=238 Identities=19% Similarity=0.250 Sum_probs=193.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc--CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCc-----c
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-----R 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-----~ 131 (494)
..+++++.||+|+||+||+|... +|+.||||++...... ....|.+|+.++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 45778888899999999999964 5899999998754321 24568899999999999999999999988665 6
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
||||||++|++|.+++. ..+++..++.|+.||+.||.|||+++ |+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998774 27999999999999999999999999 9999999999999975 899999999998777
Q ss_pred CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 212 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 212 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
.....||+.|+|||++.+.. +.++|||||||++++|++|..|+...... .+. ........+..+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~~~----~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD--------GLP----EDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS--------SCC----TTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc--------ccc----ccccccccCHHHHHH
Confidence 77778999999999987654 88999999999999999998765532110 010 000111234689999
Q ss_pred HHHHccCCCCCCCC-hHHHHHHhccc
Q 011092 292 ASRCLQYEPRERPN-PKSLVTALSPL 316 (494)
Q Consensus 292 i~~cl~~dp~~Rps-~~~vl~~L~~~ 316 (494)
|.+||+.||.+||+ ++++...|..+
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999995 56666666554
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-56 Score=430.22 Aligned_cols=250 Identities=17% Similarity=0.133 Sum_probs=209.2
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+..+.+..+||+|+||+||+|+. .+|+.||||+++.... +.+|+.++++++|||||++++++.+++.+||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 44567778889999999999995 4699999999976432 24799999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~---- 212 (494)
|+||+|.+++.. .+++++..+..|+.||+.||.|||+++ ||||||||+||||+.+| .+||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999999974 357999999999999999999999999 99999999999999887 6999999999865432
Q ss_pred -----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 213 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
....||+.|||||++.+..++.++|||||||++|||+||+.||.......+........ ......+..+++.
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP---PPIREIPPSCAPL 285 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC---CGGGGSCTTSCHH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC---CCchhcCccCCHH
Confidence 23469999999999999999999999999999999999999986543222211111111 1112345567789
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.+||.+||+.||.+|||+.|+++.|......
T Consensus 286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999988776554
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-55 Score=437.78 Aligned_cols=251 Identities=19% Similarity=0.265 Sum_probs=214.3
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..|+++++||+|+||+||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 3578889999999999999995 469999999998766666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
+||+|.+++.. ..+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .+
T Consensus 231 ~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 99999999853 46999999999999999999999999 999999999999999999999999999865432 35
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+............... .....+..++.++.+||.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCcccccCCHHHHHHHHH
Confidence 6799999999999999999999999999999999999999976543332222211111 1112234567899999999
Q ss_pred HccCCCCCCCChHHHHHHhcccccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
||+.||.+|||+.++++ ..+...
T Consensus 384 ~L~~dP~~R~ta~ell~--Hp~~~~ 406 (423)
T 4fie_A 384 LLVRDPAQRATAAELLK--HPFLAK 406 (423)
T ss_dssp HSCSSTTTSCCHHHHTT--CGGGGG
T ss_pred HcCCChhHCcCHHHHhc--CHHhcC
Confidence 99999999999999987 445443
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-56 Score=425.00 Aligned_cols=242 Identities=17% Similarity=0.194 Sum_probs=209.8
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
++|++++.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688889999999999999995 56999999999642 2234678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 211 (494)
|||+||+|.+++.. .+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 112 Ey~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999974 457999999999999999999999999 99999999999999999999999999986532
Q ss_pred --CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
..+.+||+.|||||++.+..++.++|||||||++|||+||+.||.......+........ ..+|..+++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE------YDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------CCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC------CCCCcccCHHHH
Confidence 235679999999999999899999999999999999999999998765444433322211 134556678999
Q ss_pred HHHHHHccCCCCCCCChHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLV 310 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl 310 (494)
+||.+||+.||.+|||+++++
T Consensus 263 dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHccCCHhHCcChHHHc
Confidence 999999999999999999864
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-55 Score=412.13 Aligned_cols=243 Identities=20% Similarity=0.255 Sum_probs=196.2
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC---CChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
..+|++++.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|+.++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 34678888899999999999994 5699999999975432 2356799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+ +|+|.+++.. .+++++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 6899999874 467999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
.+..||+.|||||++.+..+ +.++|||||||++|+|+||+.||.......+........ ..+|..+++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV------YTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------CCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHH
Confidence 35689999999999998776 579999999999999999999998765544333222111 1234556789999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
|+.+||+.||.+|||+.++++
T Consensus 242 li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhHCcCHHHHHc
Confidence 999999999999999999997
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-55 Score=415.77 Aligned_cols=242 Identities=19% Similarity=0.259 Sum_probs=197.4
Q ss_pred cccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEec----CCccceee
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLVA 135 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lv~ 135 (494)
++..+||+|+||+||+|.. .++..||||++...... ..+.|.+|+.++++++|||||+++++|.. ++.+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4445689999999999995 45899999999654322 25679999999999999999999999865 34579999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-Ccccccccccceeec-CCCCeEEcccCCcccCCCC-
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~- 212 (494)
|||+||+|.+++.. ...+++..+..|+.||+.||.|||+++ +||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 99999999999974 457999999999999999999999986 499999999999998 5899999999999865443
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch-hHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
.+..||+.|||||++.+ .++.++|||||||++|||+||+.||.... ...+.......... ...+...++++.+
T Consensus 187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~ 261 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----ASFDKVAIPEVKE 261 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----GGGGGCCCHHHHH
T ss_pred cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC----CCCCccCCHHHHH
Confidence 35679999999999874 69999999999999999999999986532 22222111111111 1122334578999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
||.+||+.||.+|||+.++++
T Consensus 262 li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 262 IIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999987
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-55 Score=418.39 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=200.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
++|++++.||+|+||+||+|+.. +++.||||+++.... .....+.+|+++|++++|||||++++++.+++..||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46888999999999999999852 478999999975321 123468899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
|||||+||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999999974 457999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
..+..||+.|||||++.+..++.++|||||||++|||+||+.||.+.....+........ ..+|..+++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK------LGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC------CCCCCcCCHHHH
Confidence 235689999999999999999999999999999999999999998765443333222211 123556778999
Q ss_pred HHHHHHccCCCCCCCCh-----HHHHH
Q 011092 290 RLASRCLQYEPRERPNP-----KSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~-----~~vl~ 311 (494)
+||.+||+.||.+|||+ +++++
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 99999999999999985 56654
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-54 Score=420.58 Aligned_cols=256 Identities=22% Similarity=0.284 Sum_probs=209.7
Q ss_pred CCccccccccCCCCCCCeEEEEEEcC------CCEEEEEEecCCCCCC-hHHHHHHHHHHhccCC-CCCccEEEEEecC-
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRN-NRLTNLLGCCCEG- 128 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~- 128 (494)
..+++++.+.||+|+||+||+|.+.. ++.||||.++...... .+.|.+|+.+|.+++| ||||+++|+|...
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 34678888999999999999998532 3579999997654322 4679999999999965 9999999999764
Q ss_pred CccceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC
Q 011092 129 DERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194 (494)
Q Consensus 129 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~ 194 (494)
+.++||||||++|+|.++|+... ...+++..+..|+.||+.||.|||+++ ||||||||+|||+++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCC
Confidence 56899999999999999997421 245899999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcc
Q 011092 195 DGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 267 (494)
Q Consensus 195 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~ 267 (494)
++.+||+|||+|+...... ...||+.|||||++.+..++.++|||||||++|||+| |+.||.+..........
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~ 300 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 300 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999999998654332 3457899999999999999999999999999999998 89888764321111111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 268 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
+ ........|..+++++.+++.+||+.||.+|||+.+|++.|+.+.+
T Consensus 301 i----~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 301 L----KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp H----HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H----HcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 1 1111223455667899999999999999999999999999988754
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-54 Score=412.15 Aligned_cols=250 Identities=16% Similarity=0.234 Sum_probs=193.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHH--HHHHHHhccCCCCCccEEEEEecCC----ccceee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFL--EEARSVGQLRNNRLTNLLGCCCEGD----ERLLVA 135 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~l~~~~~~~~----~~~lv~ 135 (494)
+.+.+.||+|+||+||+|++ +|+.||||+++... .+.+. .|+..+.+++|||||+++|+|..++ .+||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 45567789999999999998 68899999996532 33444 4555667889999999999998754 479999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCcccccccccceeecCCCCeEEcccCCcc
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
|||+||+|.+++.. .++++..+.+|+.|++.||+|||++ + ||||||||+||||+.++++||+|||+++
T Consensus 81 Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999963 5699999999999999999999987 6 9999999999999999999999999998
Q ss_pred cCCCC--------CccccCCCcCCCcCCCCC------CCCCCCCchhHHHHHHHHHhCCCCCCCch--------------
Q 011092 208 NSRDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHA-------------- 259 (494)
Q Consensus 208 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~vl~elltg~~p~~~~~-------------- 259 (494)
..... ....||+.|||||++.+. .++.++|||||||++|||+||+.|+....
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 64332 234689999999998754 36789999999999999999986653211
Q ss_pred -hHHhhhccccccccccccCC-CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 260 -LDLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 260 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
...+..........+..+.. .+.+.+..+.+|+.+||+.||.+|||+.+|++.|+.+.+.
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 01111111111111111111 1224567899999999999999999999999999988654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-53 Score=402.29 Aligned_cols=243 Identities=17% Similarity=0.248 Sum_probs=187.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCC---------
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--------- 129 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--------- 129 (494)
++++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 467888889999999999995 46999999999754422 2467899999999999999999999997654
Q ss_pred ---ccceeeecCCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCC
Q 011092 130 ---ERLLVAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 130 ---~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
..|+|||||+||+|.+++..... ...++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCcc
Confidence 26899999999999999974322 23556778999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC----------------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc
Q 011092 206 MKNSRDG----------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269 (494)
Q Consensus 206 a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~ 269 (494)
|+..... ....||+.|||||++.+..++.++|||||||++|||++ ||.........-....
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~ 241 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVR 241 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHh
Confidence 9865432 12469999999999999999999999999999999997 6654321110000000
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
....+ ......++.+.+||.+||+.||.+|||+.++++
T Consensus 242 ---~~~~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 242 ---NLKFP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp ---TTCCC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---cCCCC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00000 011223356788999999999999999999987
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=401.05 Aligned_cols=253 Identities=16% Similarity=0.270 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC------Ccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~~ 131 (494)
.|++++.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+.+|+.++|||||++++++... +..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 588999999999999999995 56999999999754322 245788999999999999999999997643 568
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
|||||||+ |+|.+++. ..+++++..+..|+.||+.||.|||++| ||||||||+|||++.++.+||+|||+++....
T Consensus 135 ~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 99999996 78999997 4568999999999999999999999999 99999999999999999999999999986432
Q ss_pred --------CCccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc--------
Q 011092 212 --------GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-------- 274 (494)
Q Consensus 212 --------~~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~-------- 274 (494)
..+..||+.|||||++.+.. ++.++||||+||++|||++|+.||.+................+
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 23568999999999988754 6899999999999999999999997654322211111000000
Q ss_pred ----------cccCC-------CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 275 ----------CLEGQ-------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 275 ----------~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
..... .....+.++.+||.+||..||.+|||+.++++ +++...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~--Hp~f~~ 350 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR--HPFLAK 350 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT--SGGGTT
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc--CHhhCc
Confidence 00000 11234578999999999999999999999987 455443
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-49 Score=388.91 Aligned_cols=243 Identities=19% Similarity=0.279 Sum_probs=194.9
Q ss_pred cccccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.|++++.||+|+||+||+|+.+ +++.||||.+.... ...++.+|+++|..+ +|||||++++++.+.+..|+||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4778888899999999999843 46789999986543 456789999999998 6999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~-- 212 (494)
||++||+|.+++. .+++..+..++.||+.||+|||++| |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999983 4999999999999999999999999 9999999999999876 89999999999754321
Q ss_pred ------------------------------CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhH
Q 011092 213 ------------------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALD 261 (494)
Q Consensus 213 ------------------------------~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~ 261 (494)
....||+.|||||++.+.. ++.++||||+||++|||+||+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 1346899999999998764 899999999999999999999998543211
Q ss_pred H--hhh------------------ccc---cccc--------------------------cccccCCCCchhHHHHHHHH
Q 011092 262 L--IRD------------------RNL---QMLT--------------------------DSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 262 ~--~~~------------------~~~---~~~~--------------------------~~~~~~~~~~~~~~~l~~li 292 (494)
. +.. ... ...+ ............++++.+|+
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 0 000 000 0000 00000011234567899999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.||.+|||++++++
T Consensus 334 ~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHT
T ss_pred HHHCcCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-49 Score=409.63 Aligned_cols=248 Identities=18% Similarity=0.155 Sum_probs=210.3
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.|++++.||+|+||+||+|.. .+|+.||||++......+.+.+.+|+.+|+.++|||||++++++.+.+.+|||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 3578889999999999999995 569999999997655444677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC--CCeEEcccCCcccCCCCC---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~~~--- 213 (494)
+||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999864 3457999999999999999999999999 9999999999999854 899999999998765543
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|||||++.+..++.++|||||||++|||++|..||.+............... ......+..++.++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHH
Confidence 45799999999999999999999999999999999999999987654433222211111 1111122345688999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||+.||.+|||+.++++
T Consensus 393 ~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCSSGGGSCCHHHHHH
T ss_pred HHccCChhHCcCHHHHhc
Confidence 999999999999999998
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-49 Score=406.56 Aligned_cols=247 Identities=19% Similarity=0.176 Sum_probs=202.1
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHH---HHHHhccCCCCCccEEEEEecCCcc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEE---ARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
.+++++++.||+|+||.||+|+. .+|+.||||++.+.. ......+.+| +.+++.++|||||++++++.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 45788999999999999999995 469999999996421 1223334444 6677788999999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
|||||||+||+|.+++.. .+.+++..+..++.||+.||.|||++| ||||||||+||||+.+|.+||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999974 457999999999999999999999999 99999999999999999999999999987654
Q ss_pred C--CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 212 G--KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 212 ~--~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
. .+.+||+.|||||++.+ ..|+.++|||||||++|||++|..||.......... ....... ....+|..+++++
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~a 421 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPEL 421 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHHH
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHHH
Confidence 3 46789999999999974 579999999999999999999999996542211100 0000111 1123456677899
Q ss_pred HHHHHHHccCCCCCCCC-----hHHHHH
Q 011092 289 VRLASRCLQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps-----~~~vl~ 311 (494)
.+||.+||+.||.+|++ +.+|++
T Consensus 422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 99999999999999998 577765
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-47 Score=370.33 Aligned_cols=270 Identities=26% Similarity=0.443 Sum_probs=221.9
Q ss_pred ccCHHHHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEE
Q 011092 46 EFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 125 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 125 (494)
.+++.++...+++|. +...||+|+||.||+|...+|+.||||++........+.+.+|+.+++.++||||+++++++
T Consensus 28 ~~~~~~~~~~~~~y~---~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATNNFD---HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCCCCS---CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHhccC---ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 344445555566665 55556999999999999878999999999876655577899999999999999999999999
Q ss_pred ecCCccceeeecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEccc
Q 011092 126 CEGDERLLVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203 (494)
Q Consensus 126 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 203 (494)
...+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+||
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCC
T ss_pred cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeec
Confidence 99999999999999999999996432 235899999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-----------Hhhhc
Q 011092 204 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----------LIRDR 266 (494)
Q Consensus 204 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-----------~~~~~ 266 (494)
|+++..... ....||+.|+|||++.+..++.++||||||+++|+|+||+.||...... .....
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 998754321 2335789999999998888999999999999999999999888543211 11112
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
......++......+...+..+.+++.+||+.||.+|||+.++++.|+.+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 22333334444455677889999999999999999999999999999887653
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-47 Score=368.06 Aligned_cols=271 Identities=30% Similarity=0.508 Sum_probs=225.3
Q ss_pred CCccccCHHHHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCcc
Q 011092 42 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTN 120 (494)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~ 120 (494)
..++.|++.++...+++|...+.+ |+|+||.||+|...+|+.||||++...... ....|.+|+.++..++||||++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~l---g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEE---ECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCC
T ss_pred CccceecHHHHHHHhhccccceeE---ecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccc
Confidence 445789999999998888766555 999999999999878999999999764432 2447999999999999999999
Q ss_pred EEEEEecCCccceeeecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccccccccceeecCC
Q 011092 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDED 195 (494)
Q Consensus 121 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~~ivH~Dlkp~Nill~~~ 195 (494)
+++++...+..++||||+++|+|.+++.... ..++++..+..|+.|++.||.|||+. + |+||||||+|||++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEE 170 (326)
T ss_dssp CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTT
T ss_pred eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCC
Confidence 9999999999999999999999999997533 23599999999999999999999999 8 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC-----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH---------
Q 011092 196 GNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--------- 261 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~--------- 261 (494)
+.+||+|||+++..... ....||+.|+|||++.+..++.++||||||+++|+|+||+.||......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 99999999999865432 2345899999999998888999999999999999999999988532110
Q ss_pred ----HhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 262 ----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 262 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
...........+.......+...+..+.+++.+||+.||.+|||+.++++.|+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 0111222333344444556677889999999999999999999999999999864
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-46 Score=360.49 Aligned_cols=260 Identities=19% Similarity=0.243 Sum_probs=216.9
Q ss_pred cccCHHHHHHHhcCCcc-------ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCC
Q 011092 45 REFTLEQLKNATSGFAV-------ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNN 116 (494)
Q Consensus 45 ~~~~~~~~~~~~~~~~~-------~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp 116 (494)
..++.+++..++++... +.....||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46899999999876432 344556799999999999965 6999999999876666678899999999999999
Q ss_pred CCccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC
Q 011092 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196 (494)
Q Consensus 117 nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~ 196 (494)
||+++++++..++..++||||++|++|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999985 457999999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCcccCCCC----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc
Q 011092 197 NPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 272 (494)
.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||............... .
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~ 257 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-P 257 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-S
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-C
Confidence 9999999998765432 3457899999999999888999999999999999999999998654332221111111 0
Q ss_pred cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+ ....+...+..+.+++.+||+.||.+|||+.++++
T Consensus 258 ~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 258 PP--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp CC--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CC--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 11123345678999999999999999999999987
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-47 Score=365.82 Aligned_cols=255 Identities=18% Similarity=0.266 Sum_probs=211.2
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+.+.+.+.||+|+||+||+|... ++..||+|++........+.|.+|+.++.+++||||+++++++..++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 45667788899999999999964 58999999987654444678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 213 (494)
++++|.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999999975 3467999999999999999999999999 9999999999999999999999999997653321
Q ss_pred -------------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCC
Q 011092 214 -------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 214 -------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (494)
...||+.|+|||++.+..++.++||||||+++|+|++|..|+.......... ............
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF---GLNVRGFLDRYC 244 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS---SBCHHHHHHHTC
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH---hhhhhccccccC
Confidence 3468999999999999899999999999999999999998775432111100 000001111122
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 344556799999999999999999999999999988754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=362.23 Aligned_cols=245 Identities=20% Similarity=0.265 Sum_probs=208.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+++++.||+|+||+||+|.. .+|+.||||++........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 99 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence 4577888889999999999994 568999999997766566788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
+|++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 100 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 100 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp TTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred CCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 99999999963 46999999999999999999999999 999999999999999999999999998765432 34
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..||+.|+|||++.+..++.++||||||+++|+|+||..||.............. ........+..++..+.+++.+
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~ 252 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNR 252 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSCGGGSCHHHHHHHHH
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCCCCCccccCHHHHHHHHH
Confidence 5689999999999988999999999999999999999999865432211111100 0111112344567889999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.||.+|||+.++++
T Consensus 253 ~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 253 CLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HSCSSTTTSCCHHHHTT
T ss_pred HccCChhHCcCHHHHhh
Confidence 99999999999999987
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=359.92 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=206.9
Q ss_pred CCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.+..+++++.||+|+||+||+|.. +|..||||++....... .+.|.+|+.++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 456778888999999999999987 67899999997654322 357899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 136 EYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||+++++|.+++.... ...+++..++.++.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 9999999999997422 123999999999999999999999986 3999999999999999999999999998754432
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||.............. .......+..++..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~ 269 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF----KCKRLEIPRNLNPQVA 269 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH----SCCCCCCCTTSCHHHH
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----cCCCCCCCccCCHHHH
Confidence 345789999999999998899999999999999999999999876433322211110 1112234556678999
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhccccccCC
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALSPLQKETE 321 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~ 321 (494)
+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 270 ~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999876543
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=364.17 Aligned_cols=244 Identities=20% Similarity=0.293 Sum_probs=208.4
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+..+.+++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45678888889999999999996 57999999999754322 2456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred ECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 99999999999974 356999999999999999999999999 999999999999999999999999999765433
Q ss_pred CccccCCCcCCCcCCCCCCCC-CCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~-~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.......+........ ...|...+.++.+|
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~l 244 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK------YRIPFYMSTDCENL 244 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHHHHH
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------CCCCCCCCHHHHHH
Confidence 345789999999999887764 79999999999999999999998765544433222211 12344566889999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 245 i~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 245 LKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHCCCChhHCcCHHHHhc
Confidence 99999999999999999987
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=360.71 Aligned_cols=244 Identities=20% Similarity=0.245 Sum_probs=208.1
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
..++++++.||+|+||.||++... +|+.||||+++.. .......+.+|+.++..++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 356778888899999999999954 6899999999653 233467789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC---
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 211 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 211 (494)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999874 356999999999999999999999999 99999999999999999999999999985332
Q ss_pred -CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 212 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 212 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++..++.++.+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 234 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence 23567899999999999889999999999999999999999998765443332222111 11234556789999
Q ss_pred HHHHHccCCCCCCC-----ChHHHHH
Q 011092 291 LASRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
+|.+||+.||.+|| ++.++++
T Consensus 235 li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 235 LLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 99999999999999 8999886
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=354.33 Aligned_cols=256 Identities=18% Similarity=0.227 Sum_probs=209.7
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.|++++.||+|+||.||+|.. .++..||+|.+....... .+.|.+|+.++.+++||||+++++++..++..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 577888889999999999995 468999999996544333 4578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++|++|.+++.. ..++++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 92 YIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999999999974 357999999999999999999999999 999999999999999999999999999765432
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|+|||.+.+..++.++||||||+++|+|+||+.||.................. ......+..++..+.++
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l 247 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRKDIPQSLSNV 247 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCTTSCHHHHHH
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-CcchhcccCCCHHHHHH
Confidence 2346899999999999888999999999999999999999998765433322211111111 11112234566889999
Q ss_pred HHHHccCCCCCCC-ChHHHHHHhccccccC
Q 011092 292 ASRCLQYEPRERP-NPKSLVTALSPLQKET 320 (494)
Q Consensus 292 i~~cl~~dp~~Rp-s~~~vl~~L~~~~~~~ 320 (494)
+.+||+.||.+|| ++.++.+.|..+....
T Consensus 248 i~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 248 ILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred HHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 9999999999998 8999999998876553
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=365.99 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=209.3
Q ss_pred ccccccccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 129 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 129 (494)
+.+.+.+.||+|+||.||+|... ++..||||+++..... ..+.+.+|+.+++.+ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 46778888999999999999852 3457999999765322 245789999999999 8999999999999999
Q ss_pred ccceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
..++||||++||+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCC
Confidence 9999999999999999997532 135899999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~ 268 (494)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||.......+.....
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 319 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 319 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Confidence 99999999999865432 22345788999999998889999999999999999999 888886543332221111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
. ......+..++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 320 ~-----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 320 E-----GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp T-----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c-----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1 11123345567899999999999999999999999999988754
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=349.48 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=212.8
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+.+++++.||+|+||.||+|...++..||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 5678888999999999999998888899999997654 345789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 214 (494)
+++|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 89 ~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 89 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9999999964 3456999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+|+.|+|||.+.+..++.++||||||+++|+|++ |..||............... .....+...+..+.+++.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 241 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIMN 241 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHHHH
Confidence 455778999999988889999999999999999999 88887665443332222111 111223445678999999
Q ss_pred HHccCCCCCCCChHHHHHHhccccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCcccCcCHHHHHHHHHHHHH
Confidence 9999999999999999999988754
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=360.70 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=209.6
Q ss_pred ccccccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
..+++++.||+|+||.||+|... .+..||||+++..... ..+.|.+|+.++++++||||+++++++..++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 35778888999999999999963 3446999999764322 246799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|||++|++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 129 TEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred eeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999999999964 3457999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 214 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 214 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............... .....+..++.
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 281 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-----YRLPAPMGCPH 281 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCH
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CCCCCCCCcCH
Confidence 2234678999999998889999999999999999999 88888665433322221111 11123445668
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
.+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 8999999999999999999999999999987653
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=362.18 Aligned_cols=246 Identities=17% Similarity=0.186 Sum_probs=205.7
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.|++++.||+|+||+||+|... +|..||||+++..... ..+.+.+|+.++.+++||||+++++++...+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 4677888899999999999954 5899999999764322 24679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC----CeEEcccCCcccC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 209 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 209 (494)
||||++||+|.+++. ....+++..+..++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+++..
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 999999999999996 3467999999999999999999999999 99999999999998776 7999999999876
Q ss_pred CCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 210 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 210 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+................ .....+...+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCchhccCCCH
Confidence 543 3457899999999999888999999999999999999999999765443332221111100 00011123457
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+||.+||..||.+|||+.++++
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 8999999999999999999999987
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-45 Score=350.85 Aligned_cols=271 Identities=30% Similarity=0.481 Sum_probs=221.5
Q ss_pred CccccCHHHHHHHhcCCccccc---cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC----CChHHHHHHHHHHhccCC
Q 011092 43 SFREFTLEQLKNATSGFAVENI---VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQLRN 115 (494)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~---i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h 115 (494)
.+..|++.++..++++|+...+ ...||+|+||.||+|.. +++.||||++..... ...+.|.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 3568999999999999986622 25569999999999986 678999999975321 125678999999999999
Q ss_pred CCCccEEEEEecCCccceeeecCCCCCHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC
Q 011092 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194 (494)
Q Consensus 116 pnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~ 194 (494)
|||+++++++...+..++||||+++++|.+++... ...++++..++.++.||+.||.|||+++ ++||||||+||+++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 99999999999999999999999999999998643 2456999999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH----hh
Q 011092 195 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IR 264 (494)
Q Consensus 195 ~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~----~~ 264 (494)
++.+||+|||++...... ....||+.|+|||.+.+ .++.++||||||+++|+|++|..||....... +.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 23468999999998874 58899999999999999999998886432111 10
Q ss_pred hc------cccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 265 DR------NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 265 ~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.. ......+.. ....+...+..+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSS-CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhcccc-ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 00 001111111 12345567789999999999999999999999999998774
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=347.38 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=211.5
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
..+++++.||+|+||.||+|...++..||||+++... ...+.+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 4677888899999999999998888899999997654 245789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 214 (494)
+++|.+++... ...+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 99999999652 346999999999999999999999999 9999999999999999999999999998654432 2
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||................ ....+...+..+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH-----RLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-----CCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC-----CCCCCCcChHHHHHHHH
Confidence 345677999999988889999999999999999999 888876543332222111111 11223344578999999
Q ss_pred HHccCCCCCCCChHHHHHHhcccccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+||+.||.+|||+.++++.|+.+...
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 99999999999999999999998754
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=373.32 Aligned_cols=252 Identities=19% Similarity=0.298 Sum_probs=212.2
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
..+++.+.||+|+||.||+|...++..||||+++... ...+.|.+|+.++++++||||+++++++. .+..++||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 3466778889999999999998888899999998654 35788999999999999999999999986 567899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 214 (494)
+|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 999999997543446899999999999999999999999 999999999999999999999999999865432 22
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+++.|+|||++.+..++.++||||||+++|||+| |+.||.......+....... .....+..++..+.+|+.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 419 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIMM 419 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-----CCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 345778999999998889999999999999999999 88888764433222211111 111234456789999999
Q ss_pred HHccCCCCCCCChHHHHHHhcccccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+||+.||.+|||+.+|++.|+.+...
T Consensus 420 ~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 420 RCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHccCChhHCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999988654
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=353.43 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=208.2
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
..++++++.||+|+||.||++... +|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 456788888999999999999964 6999999999653 223466788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-C
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 213 (494)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999974 457999999999999999999999999 999999999999999999999999999865443 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.++.+++.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 567899999999999889999999999999999999999998765433222222111 11234456689999999
Q ss_pred HHccCCCCCCC-----ChHHHHH
Q 011092 294 RCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rp-----s~~~vl~ 311 (494)
+||+.||.+|| +++++++
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhccCHHHcCCCcCCCHHHHhc
Confidence 99999999999 8888885
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-46 Score=361.10 Aligned_cols=254 Identities=15% Similarity=0.218 Sum_probs=201.7
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCc----cceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----RLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----~~lv~ 135 (494)
..+++++.||+|+||+||+|... ++.||||++.... .....+.+|+.++.+++||||+++++++..... .++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 46778888899999999999874 7899999996543 123456679999999999999999999987543 69999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCcccccccccceeecCCCCeEEcccCC
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------GRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~----------~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
||+++|+|.+++.. ..+++..+..|+.||+.||.|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 102 e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 102 AFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCc
Confidence 99999999999953 4699999999999999999999998 8 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCcCCCcCCCCC-----CCCCCCCchhHHHHHHHHHhCCCCCCCchhH-------------
Q 011092 206 MKNSRDG------KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALD------------- 261 (494)
Q Consensus 206 a~~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~sDv~slG~vl~elltg~~p~~~~~~~------------- 261 (494)
++..... ....||+.|+|||++.+. .++.++|||||||++|||+||+.||......
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9754332 235689999999999863 4567889999999999999999888542110
Q ss_pred ---HhhhccccccccccccCC-CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 262 ---LIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 262 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+..........+..... .....+..+.+|+.+||+.||.+|||+.++++.|+.+.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000001111111100 1224567799999999999999999999999999988654
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=371.43 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=211.2
Q ss_pred CCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCC-ccceeee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-ERLLVAE 136 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-~~~lv~e 136 (494)
+...+++++.||+|+||.||+|... |+.||||+++... ..+.|.+|+.++++++||||+++++++...+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3456788889999999999999974 6799999998654 4678999999999999999999999987765 6899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Ccc
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 215 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 215 (494)
|+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 999999999998655556899999999999999999999999 999999999999999999999999999865432 234
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.+++.|+|||++.+..++.++||||||+++|||+| |..||.............. ......+..++..+.+||.+
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~ 421 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYDVMKN 421 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHH
Confidence 56789999999998899999999999999999998 9888865432222111111 11123345667899999999
Q ss_pred HccCCCCCCCChHHHHHHhcccccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
||+.||.+|||+.++++.|+.+...
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999887643
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=369.00 Aligned_cols=252 Identities=26% Similarity=0.370 Sum_probs=209.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..+.+.+.||+|+||.||+|... +++.||||+++..... ..+.|.+|+.++++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 45677888999999999999975 6899999999754321 134688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
+++|+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999999974 2346899999999999999999999999 9999999999999999999999999998644321
Q ss_pred --ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 214 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
...+++.|+|||.+.+..++.++||||||+++|||+| |..|+.............. ......+..++..+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK-----GGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHH
Confidence 2234678999999998889999999999999999998 8888765433322211111 1111234456688999
Q ss_pred HHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 291 LASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999988754
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=357.04 Aligned_cols=255 Identities=16% Similarity=0.134 Sum_probs=206.8
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+++++.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++++ +||||+++++++..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 466778889999999999995 568999999997543 245688999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC-----eEEcccCCcccCCCC-
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG- 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~- 212 (494)
+++|.+++... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++.....
T Consensus 88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 88 -GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 89999999753 467999999999999999999999999 999999999999998887 999999999864322
Q ss_pred ----------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh---hhccccccccccccCC
Q 011092 213 ----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 213 ----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 279 (494)
....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ......... ......
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~ 243 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-ATPIEV 243 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-HSCHHH
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-cCCHHH
Confidence 345789999999999998899999999999999999999999865321111 000000000 000000
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCCC
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~ 322 (494)
.....+ ++.+++..||+.||.+||++.+|++.|+.+......
T Consensus 244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 112234 899999999999999999999999999887665433
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=356.50 Aligned_cols=248 Identities=19% Similarity=0.175 Sum_probs=201.0
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+..+++++.||+|+||+||+|... +++.||||++...... ..+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 356788888999999999999965 6899999999654322 24678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
|++|++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999996 3456999999999999999999999999 99999999999999999999999999975432
Q ss_pred -CCccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 -GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 -~~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
.....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||.............. ...........++..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---EKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH---TTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---cccccCCccccCCHHHH
Confidence 124578999999999987665 7789999999999999999999865322111000000 00000111234567899
Q ss_pred HHHHHHccCCCCCCCChHHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
+|+.+||+.||.+|||+.++++.
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHccCChhhCcCHHHHhhC
Confidence 99999999999999999999873
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=355.84 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=207.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~ 132 (494)
..+++++.||+|+||+||+|.+ .+++.||||++........+.|.+|+.++.+++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4677888999999999999984 25789999999865544456799999999999999999999998654 4589
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999999652 345999999999999999999999999 999999999999999999999999999865432
Q ss_pred -------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc-----------ccccccc
Q 011092 213 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTDS 274 (494)
Q Consensus 213 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~-----------~~~~~~~ 274 (494)
....++..|+|||.+.+..++.++||||||+++|+|+||..|+............ .......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 1234567799999999888999999999999999999999877544322111000 0000011
Q ss_pred cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 275 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
......+..++.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 112233556678999999999999999999999999999988654
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-46 Score=355.38 Aligned_cols=252 Identities=21% Similarity=0.329 Sum_probs=207.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CC-------CEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQ-------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
..+.+++.||+|+||.||+|... ++ ..||+|++........+.|.+|+.++++++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 35677888899999999999943 34 47999999765555567899999999999999999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC--------eEEccc
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTF 203 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~--------~kl~Df 203 (494)
++||||++|++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999999974 2345999999999999999999999999 999999999999998887 999999
Q ss_pred CCcccCCCCCccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc
Q 011092 204 GLMKNSRDGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282 (494)
Q Consensus 204 gla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (494)
|++..........+|+.|+|||++.+ ..++.++||||||+++|+|++|..|+............... ....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc------cCCCCC
Confidence 99987666556678999999999987 66899999999999999999976555433211111111000 112223
Q ss_pred hhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 283 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
..+.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 3346799999999999999999999999999988654
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-45 Score=347.42 Aligned_cols=252 Identities=25% Similarity=0.340 Sum_probs=209.6
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
...+++++.||+|+||+||++...++..||||++.... ...+.+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 34678889999999999999998888899999997654 24578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 213 (494)
++++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 102 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 102 ANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 999999999642 356999999999999999999999999 999999999999999999999999999765432 2
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||............... .....+...+..+.+++
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 254 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIM 254 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHHH
Confidence 3445778999999998889999999999999999998 88888654333222221111 11122334457899999
Q ss_pred HHHccCCCCCCCChHHHHHHhccccc
Q 011092 293 SRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+||+.||.+|||+.++++.|..+..
T Consensus 255 ~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 255 YSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCChhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999999987754
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=353.67 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=204.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+.+.+.||+|+||.||+|... +|..||||++...... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4667788899999999999964 5899999999764322 35679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC----CeEEcccCCcccC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 209 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 209 (494)
||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999996 3467999999999999999999999999 99999999999999887 8999999999875
Q ss_pred CCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 210 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 210 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
... ....||+.|+|||++.+..++.++||||||+++|+|++|..||................. ..........+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 246 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 246 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCH
Confidence 432 345689999999999988899999999999999999999999876543322211111000 000011123457
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+|+.+||+.||.+|||+.++++
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 8999999999999999999999998
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=375.52 Aligned_cols=253 Identities=21% Similarity=0.336 Sum_probs=213.9
Q ss_pred ccccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+.+.+.||+|+||.||+|.+.. +..||||.++... ...+.|.+|+.++++++||||++++++|...+..++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 456778889999999999999754 8899999997654 34788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-----
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 213 (494)
++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 9999999997655567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...+++.|+|||++.+..++.++|||||||++|||+| |..||.......+.... ........+..++..+.+||
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----EKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----HTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCCCCHHHHHHH
Confidence 2334678999999998889999999999999999999 88887654332222111 11112233556678999999
Q ss_pred HHHccCCCCCCCChHHHHHHhcccccc
Q 011092 293 SRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+||+.||.+|||+.+|++.|+.+...
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999987543
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=363.81 Aligned_cols=255 Identities=20% Similarity=0.313 Sum_probs=209.3
Q ss_pred ccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
..+.+++.||+|+||.||+|.+. ++..||||+++..... ....+.+|+.++.+++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 35678888999999999999943 3668999999754322 2457889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC---CeEEcccC
Q 011092 133 LVAEYMPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFG 204 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg 204 (494)
+||||++||+|.+++.... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999999997532 245899999999999999999999999 99999999999999554 59999999
Q ss_pred CcccC------CCCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccccccccc
Q 011092 205 LMKNS------RDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 205 la~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (494)
+++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||.......+........ .
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~-----~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-----R 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-----C
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----C
Confidence 98743 22334567889999999988889999999999999999998 888887654333322211111 1
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
...+..++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 1234455678999999999999999999999999999886653
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=347.85 Aligned_cols=245 Identities=17% Similarity=0.190 Sum_probs=197.7
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--------------------------ChHHHHHHHHHHh
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--------------------------DPRQFLEEARSVG 111 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 111 (494)
+..+.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 45677888889999999999995 45889999999654311 1356899999999
Q ss_pred ccCCCCCccEEEEEec--CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccc
Q 011092 112 QLRNNRLTNLLGCCCE--GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189 (494)
Q Consensus 112 ~l~hpnIv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~N 189 (494)
+++||||+++++++.. .+..++||||+++++|.+++ ...++++..+..++.||+.||.|||+++ |+||||||+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHH
Confidence 9999999999999986 56789999999999998876 3467999999999999999999999999 9999999999
Q ss_pred eeecCCCCeEEcccCCcccCCCC----CccccCCCcCCCcCCCCCC---CCCCCCchhHHHHHHHHHhCCCCCCCchhHH
Q 011092 190 ILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDL 262 (494)
Q Consensus 190 ill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~vl~elltg~~p~~~~~~~~ 262 (494)
||++.++.+||+|||+++..... ....||+.|+|||++.+.. ++.++||||||+++|+|++|+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 99999999999999999865433 2456899999999998655 3778999999999999999999987654333
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 263 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+......... ........+..+.+++.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQAL----EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCCC----CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhcccC----CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2221111111 11112345678999999999999999999999975
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=362.06 Aligned_cols=244 Identities=19% Similarity=0.251 Sum_probs=203.9
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
...+++++.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|..++..+ +||||+++++++...+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 456778888899999999999954 5899999999753 223456788999999988 79999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999974 356999999999999999999999999 99999999999999999999999999985432
Q ss_pred --CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++...+..+.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~ 252 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHEDAT 252 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHH
Confidence 23567899999999998888999999999999999999999999776544333322211 1123445668899
Q ss_pred HHHHHHccCCCCCCCCh------HHHHH
Q 011092 290 RLASRCLQYEPRERPNP------KSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~------~~vl~ 311 (494)
+++.+||+.||.+||++ .++++
T Consensus 253 ~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 253 GILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 99999999999999998 67765
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=369.87 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=208.6
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
..+.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.. +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 3466778889999999999998877889999998654 346789999999999999999999999976 67899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 214 (494)
+|+|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 999999997544456999999999999999999999999 999999999999999999999999999865432 12
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+++.|+|||.+.+..++.++||||||+++|||+| |+.||.......+....... .....+..++..+.+|+.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 415 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 345678999999998889999999999999999999 88888664333222211111 111234456788999999
Q ss_pred HHccCCCCCCCChHHHHHHhccccccC
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
+||+.||.+|||+.++++.|+.+....
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHccCChhhCcCHHHHHHHHHHHhccC
Confidence 999999999999999999999886543
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=359.13 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=204.7
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+++.+++++.||+|+||.||++... +++.||||++... .....+.+.+|+.++..++|||||++++++...+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4567888899999999999999954 5899999999642 22346788999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||++||+|.+++. ....+++..+..++.||+.||.|||++| |+||||||+|||++.+|.+||+|||+++.....
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999997 3567999999999999999999999999 999999999999999999999999999865433
Q ss_pred --CccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 213 --KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ....+. .....++...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~~~~~~--~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-IVHTFE--TTVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-HHHHHH--HCCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-HHHHHh--hcccCCCCcCCHH
Confidence 35678999999999974 458999999999999999999999986432111100 000000 0112344556789
Q ss_pred HHHHHHHHccCCCCCCCC-hHHHHH
Q 011092 288 LVRLASRCLQYEPRERPN-PKSLVT 311 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps-~~~vl~ 311 (494)
+.+||.+||+.||.+||+ +.+++.
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHc
Confidence 999999999999999998 666664
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=356.02 Aligned_cols=247 Identities=15% Similarity=0.179 Sum_probs=205.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..|.+++.||+|+||.||+|... ++..||+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 46778888899999999999954 58899999997543 23556889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC--CCCeEEcccCCcccCCCCC---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~--- 213 (494)
+|++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++.......
T Consensus 84 ~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 84 SGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp CCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 99999999964 2346999999999999999999999999 999999999999987 7899999999998765443
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...+|+.|+|||++.+..++.++||||||+++|+|++|..||................... ........+.++.+++.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~li~ 239 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDFVD 239 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHHHH
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC--ChhhhccCCHHHHHHHH
Confidence 3468999999999998888999999999999999999999987654433222211111100 00011234578999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||..||.+|||+.++++
T Consensus 240 ~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 240 RLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TTSCSSGGGSCCHHHHHH
T ss_pred HHcCCChhHCcCHHHHhc
Confidence 999999999999999998
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=359.55 Aligned_cols=252 Identities=18% Similarity=0.131 Sum_probs=196.0
Q ss_pred cCCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.....|++++.||+|+||+||++... +++.||||++..... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 34567889999999999999999965 689999999976543 3467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC--eEEcccCCcccCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRD-- 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~-- 211 (494)
||++||+|.+++.. .+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 96 EYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred EeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999999864 356999999999999999999999999 999999999999987665 99999999874332
Q ss_pred -CCccccCCCcCCCcCCCCCCCCCC-CCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 -GKSYSTNLAFTPPEYLRTGRVTPE-SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 -~~~~~~t~~y~aPE~~~~~~~~~~-sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...............+.............+..+.
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 252 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC 252 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence 234578999999999988777655 899999999999999999986532111101111111111111111123457899
Q ss_pred HHHHHHccCCCCCCCChHHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
+||.+||+.||.+|||+.++++.
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 253 HLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHHhC
Confidence 99999999999999999999873
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=362.81 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=199.3
Q ss_pred cccccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.+.+.+.||+|+||.||+|... ++..||||+++..... ..+.|.+|+.++.+++||||+++++++...+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 4566777899999999999854 4778999999764322 2457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 213 (494)
||+++++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 126 EYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999999964 3457999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 214 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 214 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||.......+....... .....+..++..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 278 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-----YRLPPPMDCPAA 278 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-----EECCCCTTCBHH
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHH
Confidence 1234678999999998889999999999999999998 88888654333222211111 111223456688
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.+++.+||+.||.+||++.++++.|+.+...
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=366.18 Aligned_cols=246 Identities=17% Similarity=0.191 Sum_probs=204.3
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.|++++.||+|+||+||+|.. .+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~ 91 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence 567788889999999999995 46899999999764422 245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec---CCCCeEEcccCCcccCCCC--
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 212 (494)
++||+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 92 ~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 92 VTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 999999999874 456999999999999999999999999 99999999999998 5688999999999765543
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.......+.......... .........++++.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAKD 246 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHHH
Confidence 2357899999999999889999999999999999999999998765443333222111111 111112345688999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
|+.+||+.||.+|||+.++++
T Consensus 247 li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999998
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=349.91 Aligned_cols=250 Identities=21% Similarity=0.277 Sum_probs=199.8
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
...|++++.||+|+||+||+|...+|+.||||++....... ...+.+|+.++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 45788899999999999999998889999999997543222 4678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++ ++|.+.+.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 100 FME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp CCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 998 588888764 3456999999999999999999999999 999999999999999999999999999865422
Q ss_pred CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc-------------------
Q 011092 213 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------------- 272 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~------------------- 272 (494)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...............+.
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 23467999999999876 4589999999999999999999998865422211111000000
Q ss_pred -----cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 -----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 -----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
............+.++.+|+.+||+.||.+|||+.++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000011234578999999999999999999999997
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=357.73 Aligned_cols=246 Identities=19% Similarity=0.225 Sum_probs=204.1
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.|++++.||+|+||.||+|... +|..||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 4677788899999999999964 5899999999765432 245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC---CCeEEcccCCcccCCCCC-
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~- 213 (494)
++||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++.......
T Consensus 110 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 99999999986 3457999999999999999999999999 9999999999999864 459999999998765432
Q ss_pred --ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 214 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.......+.......... ........++.++.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHH
Confidence 457899999999999888999999999999999999999998765433322221111110 0111123456889999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
|.+||+.||.+|||+.++++
T Consensus 265 i~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999986
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=356.26 Aligned_cols=245 Identities=16% Similarity=0.176 Sum_probs=209.0
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
....+++++.||+|+||.||++... +|+.||||++... .....+.+.+|+.++..++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3457888899999999999999964 6899999999643 22346778999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999999974 356999999999999999999999999 999999999999999999999999999865443
Q ss_pred CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++...+..+.++|
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLL 269 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHH
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 3567899999999999888999999999999999999999998765443332222111 1123445678999999
Q ss_pred HHHccCCCCCCCC-----hHHHHH
Q 011092 293 SRCLQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps-----~~~vl~ 311 (494)
.+||+.||.+||+ +.++++
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHhhcCHHhccCCccCCHHHHHh
Confidence 9999999999998 888875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-45 Score=357.23 Aligned_cols=259 Identities=23% Similarity=0.295 Sum_probs=212.0
Q ss_pred hcCCccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecC
Q 011092 56 TSGFAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEG 128 (494)
Q Consensus 56 ~~~~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 128 (494)
.-....+++++.||+|+||.||+|... +++.||||+++...... .+.|.+|+.++++++||||+++++++..+
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 334456778888899999999999964 34789999997654222 46789999999999999999999999999
Q ss_pred CccceeeecCCCCCHHHHhcccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 011092 129 DERLLVAEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 186 (494)
Q Consensus 129 ~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlk 186 (494)
+..++||||+++++|.+++.... ...+++..++.|+.||+.||.|||+++ |+|||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlk 201 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLA 201 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCS
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCC
Confidence 99999999999999999997532 157999999999999999999999999 9999999
Q ss_pred ccceeecCCCCeEEcccCCcccCCC------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCch
Q 011092 187 AYRILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHA 259 (494)
Q Consensus 187 p~Nill~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~ 259 (494)
|+|||++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++||||||+++|+|+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999875432 233457889999999988889999999999999999999 888886654
Q ss_pred hHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 260 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
...+........ ....+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 282 ~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 HEEVIYYVRDGN-----ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred hHHHHHHHhCCC-----cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 333222111111 11234456688999999999999999999999999999886543
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=346.03 Aligned_cols=249 Identities=18% Similarity=0.233 Sum_probs=199.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..|++++.||+|+||+||+|... +++.||||++....... ...+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46778888999999999999964 58999999997654332 4678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|+++ +|.+.+.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9985 66665543 3467999999999999999999999999 999999999999999999999999999765422
Q ss_pred CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCc-hhHHhhhcccc--------------ccc----
Q 011092 213 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQ--------------MLT---- 272 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~-~~~~~~~~~~~--------------~~~---- 272 (494)
....+|+.|+|||++.+.. ++.++||||||+++|+|++|..|+... ........... ...
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3456789999999998766 799999999999999999998875332 11111110000 000
Q ss_pred -----cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 -----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 -----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
............+..+.+|+.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000011122346688999999999999999999999987
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=360.48 Aligned_cols=255 Identities=22% Similarity=0.290 Sum_probs=211.6
Q ss_pred ccccccccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 129 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 129 (494)
..+.+.+.||+|+||.||+|... .+..||||+++..... ..+.+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 46677888899999999999842 2357999999765322 246789999999999 9999999999999999
Q ss_pred ccceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
..++||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCC
Confidence 9999999999999999997532 245999999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~ 268 (494)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.......+.....
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 307 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999999865432 23356788999999998889999999999999999999 888887654433322211
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
.. .....+..++.++.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 308 ~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 308 EG-----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp TT-----CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred cC-----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11 112234456688999999999999999999999999999887653
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=360.44 Aligned_cols=249 Identities=17% Similarity=0.251 Sum_probs=202.9
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
+..++++++.||+|+||.||+|+.. +++.||||+++.... .....+..|..++.++ +|||||++++++...+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3456788888999999999999964 588999999975432 2345688999999888 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC--
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 210 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-- 210 (494)
+||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999974 356999999999999999999999999 9999999999999999999999999998532
Q ss_pred --CCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh-----hccccccccccccCCCCch
Q 011092 211 --DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-----DRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 211 --~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 283 (494)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+.. ....+|..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence 224567899999999999999999999999999999999999998532111000 000001111 11234556
Q ss_pred hHHHHHHHHHHHccCCCCCCCCh------HHHHH
Q 011092 284 DGTELVRLASRCLQYEPRERPNP------KSLVT 311 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~------~~vl~ 311 (494)
++.++.+||.+||+.||.+||++ .++++
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 77899999999999999999986 56654
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=357.28 Aligned_cols=244 Identities=18% Similarity=0.246 Sum_probs=206.0
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
..++.+++.||+|+||.||+|... +|+.||||+++... ......+..|..++..+ +||||+++++++.+.+..++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 456777888899999999999964 58999999997532 23466788999999987 99999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 9999999999999974 356999999999999999999999999 99999999999999999999999999985432
Q ss_pred --CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++...+.++.
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 246 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAK 246 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHHHH
Confidence 23567899999999999888999999999999999999999998765443332222111 1123445678999
Q ss_pred HHHHHHccCCCCCCCChH-HHHH
Q 011092 290 RLASRCLQYEPRERPNPK-SLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~-~vl~ 311 (494)
++|.+||+.||.+||++. ++++
T Consensus 247 ~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 247 DLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp HHHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHHHHhcCCHhHcCCChHHHHc
Confidence 999999999999999997 6653
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=342.31 Aligned_cols=255 Identities=20% Similarity=0.299 Sum_probs=210.4
Q ss_pred CCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
+++.+++++.||+|+||.||+|... +..||||+++...... .+.|.+|+.++++++||||+++++++... +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 3567788889999999999999984 7899999997654322 45799999999999999999999999887 77899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
||||+++|+|.+++.......+++..++.|+.||+.||.|||+.+ +++||||||+|||++.++.++|+|||++.... .
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-S 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-C
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-c
Confidence 999999999999998644456999999999999999999999975 39999999999999999999999998875533 3
Q ss_pred CccccCCCcCCCcCCCCCCCCC---CCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~~~---~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....+|+.|+|||.+.+...+. ++||||||+++|+|++|+.||............... ......+...+..+.
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 241 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE----GLRPTIPPGISPHVS 241 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS----CCCCCCCTTCCHHHH
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc----CCCCCCCCCCCHHHH
Confidence 3457899999999998765544 799999999999999999998764433222211111 112233455678999
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
+++.+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999988753
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=356.15 Aligned_cols=243 Identities=19% Similarity=0.227 Sum_probs=204.8
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+..|.+++.||+|+||.||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 45678888999999999999995 56899999998642 122346789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+ +|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp ECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred EECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 9999 6899998864 356999999999999999999999999 999999999999999999999999999865443
Q ss_pred -CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||.......+...... .....+...+..+.+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~------~~~~~p~~~s~~~~~ 237 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS------CVYVMPDFLSPGAQS 237 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS------SCCCCCTTSCHHHHH
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc------CCCCCcccCCHHHHH
Confidence 35578999999999988775 7899999999999999999999865433222211111 011234556788999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
|+.+||+.||.+|||+.++++
T Consensus 238 li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 238 LIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHHh
Confidence 999999999999999999986
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=361.93 Aligned_cols=255 Identities=17% Similarity=0.178 Sum_probs=209.0
Q ss_pred HHHHhcCCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEec
Q 011092 52 LKNATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 127 (494)
+....-...++++++.||+|+||.||+|... +++.||+|+++.. .......+.+|+.++..++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3334445567888888999999999999965 5899999999642 12234568899999999999999999999999
Q ss_pred CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 128 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
.+..|+||||++||+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999853 46999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC-----CccccCCCcCCCcCCCCCC----CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccC
Q 011092 208 NSRDG-----KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 208 ~~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
..... ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....................
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-- 294 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF-- 294 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC--
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccC--
Confidence 65543 2567999999999997654 788999999999999999999999765443333222211110011
Q ss_pred CCCchhHHHHHHHHHHHccCCCCC--CCChHHHHHH
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRE--RPNPKSLVTA 312 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~vl~~ 312 (494)
.....++.++.+||.+||..+|.+ ||++++|++.
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111245688999999999999988 9999999973
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=345.70 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=200.2
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..|++++.||+|+||+||+|...+|+.||||++..... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46778888999999999999987799999999965432 2246788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LD-QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CS-EEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 98 599998864 3457999999999999999999999999 999999999999999999999999998764322 2
Q ss_pred ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------------cc------
Q 011092 214 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LT------ 272 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~--------------~~------ 272 (494)
...+|+.|+|||++.+. .++.++||||||+++|+|++|+.||............... ..
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 34679999999998764 5899999999999999999999988754322111110000 00
Q ss_pred ---cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 ---DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+..........+.++.+|+.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000001122346688999999999999999999999987
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=341.27 Aligned_cols=251 Identities=19% Similarity=0.256 Sum_probs=198.7
Q ss_pred CCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC----ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
++..+++.+.||+|+||.||+|.. .+..||||+++..... ..+.+.+|+.+++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 356777888889999999999997 4789999998754322 25678999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CcccccccccceeecC--------CCCeEEccc
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDE--------DGNPRLSTF 203 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~ivH~Dlkp~Nill~~--------~~~~kl~Df 203 (494)
||||+++++|.+++. ...+++..++.++.|++.||.|||+++ +++||||||+|||++. ++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999984 467999999999999999999999987 3779999999999986 778999999
Q ss_pred CCcccCCCC--CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 204 GLMKNSRDG--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 204 gla~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
|++...... ....+|+.|+|||.+.+..++.++||||||+++++|++|+.||............... ......+
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN----KLALPIP 236 (271)
T ss_dssp CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS----CCCCCCC
T ss_pred CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC----CCCCCCC
Confidence 998765433 2456899999999999888999999999999999999999998764332222111111 1112234
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 45668899999999999999999999999999753
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=349.60 Aligned_cols=248 Identities=19% Similarity=0.251 Sum_probs=196.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhc--cCCCCCccEEEEEecC----Ccccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQ--LRNNRLTNLLGCCCEG----DERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~~~~~----~~~~lv 134 (494)
.+.+++.||+|+||+||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++... ...++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 567778889999999999988 6889999999653 35567777777776 7999999999997653 457999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
|||+++|+|.+++. ...+++..++.|+.||+.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 85 THYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp ECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred hhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999999994 457999999999999999999999 888 999999999999999999999999998
Q ss_pred ccCCCC--------CccccCCCcCCCcCCCCC------CCCCCCCchhHHHHHHHHHhC----------CCCCCCch---
Q 011092 207 KNSRDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHA--- 259 (494)
Q Consensus 207 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~vl~elltg----------~~p~~~~~--- 259 (494)
+..... ....||+.|+|||++.+. .++.++||||||+++|||+|| ..||....
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 754332 234789999999999876 455799999999999999999 66664321
Q ss_pred --hHHhhhcccccc-ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 260 --LDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 260 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
............ .........+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 111111110000 111111112345778999999999999999999999999999865
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-44 Score=340.80 Aligned_cols=252 Identities=23% Similarity=0.391 Sum_probs=204.4
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC-------hHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
..+++++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++++++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 4677888889999999999996 468999999997644332 167899999999999999999999996654
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-cccccccccceeecCCCC-----eEEcccCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR-ALYHDLNAYRILFDEDGN-----PRLSTFGL 205 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-ivH~Dlkp~Nill~~~~~-----~kl~Dfgl 205 (494)
++||||+++++|.+.+.. ...++++..++.++.|++.||.|||++++ ++||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 799999999999988864 34579999999999999999999999864 999999999999987776 99999999
Q ss_pred cccCCCC-CccccCCCcCCCcCCC--CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc
Q 011092 206 MKNSRDG-KSYSTNLAFTPPEYLR--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282 (494)
Q Consensus 206 a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (494)
++..... ....+|+.|+|||++. ...++.++||||||+++|+|++|+.||.......... .............+.
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIPE 253 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCCT
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCCc
Confidence 9865443 3457899999999984 4557889999999999999999999986543221110 000111112223455
Q ss_pred hhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 283 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
.++..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 254 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 6678999999999999999999999999998754
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=359.75 Aligned_cols=248 Identities=19% Similarity=0.162 Sum_probs=206.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+++++.||+|+||.||+|... +|+.||+|++..........+.+|+.++..++||||+++++++...+..++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 45778888899999999999954 68999999997654334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec--CCCCeEEcccCCcccCCCCC---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~--- 213 (494)
+|++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++......
T Consensus 131 ~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 131 SGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp CCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred CCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 99999999864 2346999999999999999999999999 99999999999997 45789999999998765432
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|+|||++.+..++.++|||||||++|+|++|..||................ ..........++.++.+||.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~ 286 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD--WEFDEDAFSSVSPEAKDFIK 286 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC--CCCCSSTTTTSCHHHHHHHH
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCccccccCCHHHHHHHH
Confidence 3468999999999998889999999999999999999999987654322221111110 01111223356688999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||+.||.+|||+.++++
T Consensus 287 ~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 287 NLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTSCSSGGGSCCHHHHHT
T ss_pred HHcCCChhHCcCHHHHhh
Confidence 999999999999999987
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=353.25 Aligned_cols=247 Identities=18% Similarity=0.187 Sum_probs=202.5
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC-----CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM-----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.|++++.||+|+||+||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 577888889999999999995 46899999998531 122467899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC---eEEcccCCcccC
Q 011092 135 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNS 209 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgla~~~ 209 (494)
|||++|++|.+.+... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999998887642 2346899999999999999999999999 999999999999986554 999999999876
Q ss_pred CCC----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 210 RDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 210 ~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.................. .......++
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~---~~~~~~~~s 260 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKM---NPRQWSHIS 260 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCC---CHHHHTTSC
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCC---CccccccCC
Confidence 543 2356899999999999888999999999999999999999998765432221111000000 000012345
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+||.+||+.||.+|||+.++++
T Consensus 261 ~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 261 ESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 78999999999999999999999986
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=339.89 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=212.2
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+.+++++.||+|+||.||++...++..||+|++..... ..+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 356778888899999999999988888999999976542 4578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 213 (494)
++++|.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 86 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999964 3456899999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...+++.|+|||++.+..++.++||||||+++|+|++ |..||............... .....+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM 238 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHHH
Confidence 3456778999999988889999999999999999999 78887654333222211111 11122334567899999
Q ss_pred HHHccCCCCCCCChHHHHHHhccccc
Q 011092 293 SRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+||+.||.+|||+.++++.|+.+..
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999988754
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=354.20 Aligned_cols=244 Identities=19% Similarity=0.257 Sum_probs=206.1
Q ss_pred CccccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCC---CCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
..++++++.||+|+||.||+|.... |+.||||+++.. .....+.+..|..++..+ +||||+++++++...+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 4567788888999999999999654 889999999753 223467788999999988 89999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.+|.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999999974 356999999999999999999999999 99999999999999999999999999986322
Q ss_pred --CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+....... ...++...+.++.
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 249 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAV 249 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHH
Confidence 23567899999999999889999999999999999999999998765443333222211 1123456678999
Q ss_pred HHHHHHccCCCCCCCCh-----HHHHH
Q 011092 290 RLASRCLQYEPRERPNP-----KSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~-----~~vl~ 311 (494)
+||.+||+.||.+||++ +++++
T Consensus 250 ~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 250 AICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 99999999999999964 66664
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=352.61 Aligned_cols=243 Identities=18% Similarity=0.255 Sum_probs=199.7
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC---hHHHHHHHHHHhcc-CCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 133 (494)
..++++++.||+|+||.||+++.. +++.||||+++...... .+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 456778888999999999999964 58999999997654332 34578999999988 89999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999974 356999999999999999999999999 99999999999999999999999999985322
Q ss_pred --CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-----hhhccccccccccccCCCCchh
Q 011092 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+... ...+|...
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~ 242 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL 242 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence 235678999999999998889999999999999999999999985421100 000000001111 11245566
Q ss_pred HHHHHHHHHHHccCCCCCCCCh
Q 011092 285 GTELVRLASRCLQYEPRERPNP 306 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~ 306 (494)
+..+.+++.+||+.||.+||++
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTC
T ss_pred CHHHHHHHHHHhcCCHhHCCCC
Confidence 7899999999999999999996
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=355.89 Aligned_cols=252 Identities=17% Similarity=0.267 Sum_probs=203.5
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCE----EEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
..+++++.||+|+||.||+|.. .++.. ||+|.+.... ......+.+|+.++.+++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4577888899999999999995 34554 7888875443 223567889999999999999999999986 466899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+++|+|.+++... ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 99999999999999642 357899999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 213 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.......+....... .....+...+.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-----ERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT-----CBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC-----CCCCCCCcCcH
Confidence 23456789999999998889999999999999999999 99888654332222111110 11122333456
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 789999999999999999999999999888654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=358.66 Aligned_cols=246 Identities=19% Similarity=0.157 Sum_probs=198.7
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
....+.||+|+||.||+|.. .+|..||+|+++.......+.|.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 33355689999999999995 46899999999875544567899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee--cCCCCeEEcccCCcccCCCC---Ccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGNPRLSTFGLMKNSRDG---KSY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill--~~~~~~kl~Dfgla~~~~~~---~~~ 215 (494)
++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 171 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 248 (373)
T 2x4f_A 171 GELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248 (373)
T ss_dssp CEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCC
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccc
Confidence 999998864 3346999999999999999999999999 9999999999999 56788999999999876543 234
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.||+.|+|||++.+..++.++|||||||++|||++|..||.................. ........++.++.+||.+|
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~ 326 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISKL 326 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHTT
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHHH
Confidence 6899999999999888999999999999999999999998765433222211111110 01111224567899999999
Q ss_pred ccCCCCCCCChHHHHH
Q 011092 296 LQYEPRERPNPKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~ 311 (494)
|+.||.+|||+.++++
T Consensus 327 L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 327 LIKEKSWRISASEALK 342 (373)
T ss_dssp SCSSGGGSCCHHHHHH
T ss_pred cCCChhhCCCHHHHhc
Confidence 9999999999999997
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=367.40 Aligned_cols=244 Identities=22% Similarity=0.256 Sum_probs=198.7
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
...+++++.||+|+||.||+|.. .+|+.||||++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35678888899999999999995 46899999999753 223356788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999974 3579999999999999999999998 88 99999999999999999999999999876432
Q ss_pred --CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+....... ...++..++.++.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~ 377 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEAK 377 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHH
Confidence 23567899999999999889999999999999999999999998765443332222111 1123445668999
Q ss_pred HHHHHHccCCCCCCC-----ChHHHHH
Q 011092 290 RLASRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
+||.+||+.||.+|| |+.++++
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 999999999999999 9999986
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=348.98 Aligned_cols=256 Identities=14% Similarity=0.157 Sum_probs=206.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCC--ccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~ 135 (494)
..+.+++.||+|+||+||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 35778888899999999999965 48999999997533 234677889999999999999999999998765 679999
Q ss_pred ecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee----cCCCCeEEcccCCcccCC
Q 011092 136 EYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~ 210 (494)
||+++++|.+++.... ...+++..++.|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999999997533 234999999999999999999999999 9999999999999 778889999999998755
Q ss_pred CCC---ccccCCCcCCCcCCC--------CCCCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccccc---
Q 011092 211 DGK---SYSTNLAFTPPEYLR--------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLT--- 272 (494)
Q Consensus 211 ~~~---~~~~t~~y~aPE~~~--------~~~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~~~--- 272 (494)
... ...+|+.|+|||++. +..++.++|||||||++|||+||+.||..... ...........+
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 432 456899999999875 46789999999999999999999988753211 111000000000
Q ss_pred ----------------cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 273 ----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 273 ----------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
........+...+..+.+++.+||+.||.+|||+.++++.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 00111234567788999999999999999999999999977654
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=345.30 Aligned_cols=252 Identities=19% Similarity=0.299 Sum_probs=200.5
Q ss_pred CCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
++..+++.+.||+|+||.||+|... ++.||||.+... ...+.|.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 3556788888999999999999974 688999999643 24678999999999999999999999887 458999999
Q ss_pred CCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHh---cCCcccccccccceeecCCCC-eEEcccCCcccCCCC
Q 011092 138 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTS---KGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDG 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~---~~~ivH~Dlkp~Nill~~~~~-~kl~Dfgla~~~~~~ 212 (494)
++|++|.+++..... ..+++..++.++.||+.||.|||+ ++ |+||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999974322 247899999999999999999999 77 999999999999998887 799999998765432
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH--hhhccccccccccccCCCCchhHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||....... ....... ......+..++..+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~ 234 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-----GTRPPLIKNLPKPIE 234 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-----TCCCCCBTTCCHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-----CCCCCcccccCHHHH
Confidence 34568999999999998889999999999999999999999886432111 0000000 011122345567899
Q ss_pred HHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 290 RLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
+++.+||+.||.+|||+.++++.|+.+....
T Consensus 235 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 235 SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999886654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=350.04 Aligned_cols=253 Identities=22% Similarity=0.294 Sum_probs=209.0
Q ss_pred ccccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
..+.+.+.||+|+||.||+|.. .++..||||++...... ..+.+.+|+.++++++||||+++++++...+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 4567778889999999999985 23578999999754322 2467889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccce
Q 011092 133 LVAEYMPNETLAKHLFHWET----------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Ni 190 (494)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheE
Confidence 99999999999999975322 34889999999999999999999999 99999999999
Q ss_pred eecCCCCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHh
Q 011092 191 LFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLI 263 (494)
Q Consensus 191 ll~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~ 263 (494)
|++.++.+||+|||+++..... ....+|+.|+|||.+.+..++.++||||||+++|+|+| |..||.......+
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999865432 23345788999999988889999999999999999999 8888865433222
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 264 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
...... ......+..++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 262 ~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhc-----CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 211111 11122344567899999999999999999999999999988754
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=358.44 Aligned_cols=252 Identities=17% Similarity=0.192 Sum_probs=201.6
Q ss_pred CccccccccCCCC--CCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEK--APNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
-..|++++.||+| +||.||+|... +|+.||||++....... .+.+.+|+.+++.++|||||++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3467888889999 99999999965 69999999997643222 4568889999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||+++++|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 999999999999997654567999999999999999999999999 99999999999999999999999998754311
Q ss_pred ---------CCccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc----ccc---
Q 011092 212 ---------GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM----LTD--- 273 (494)
Q Consensus 212 ---------~~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~----~~~--- 273 (494)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............... +.+
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence 123467889999999987 56899999999999999999999998653221111100000 000
Q ss_pred ---------------------------------ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 ---------------------------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ---------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.......+...+..+.+||.+||+.||.+|||+.++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00001123345678999999999999999999999996
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=346.76 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=190.2
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.+++++.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 4567788889999999999994 4689999999976443 2357789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 138 MPNETLAKHLFHWE----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 138 ~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
++ ++|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 98 69999886432 246899999999999999999999999 99999999999999999999999999986542
Q ss_pred --CCccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------------cc--
Q 011092 212 --GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LT-- 272 (494)
Q Consensus 212 --~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~--------------~~-- 272 (494)
.....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||............... ..
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 2345679999999998764 5899999999999999999999998765332211110000 00
Q ss_pred ccc------------ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 DSC------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ~~~------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... .....+...+.++.+|+.+||+.||.+|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000 000112235678999999999999999999999986
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=349.40 Aligned_cols=243 Identities=18% Similarity=0.246 Sum_probs=197.0
Q ss_pred ccccccccCCCCCCCeEEEEEE----cCCCEEEEEEecCCC----CCChHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
..+++++.||+|+||.||++.. .+|+.||||+++... ......+.+|+.+++.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4677888889999999999996 468999999997643 12345688999999999999999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999974 356899999999999999999999999 99999999999999999999999999875432
Q ss_pred ----CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 212 ----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 212 ----~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
.....||+.|+|||++.+..++.++||||||+++|+|++|+.||............... ....+...+..
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~ 247 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQE 247 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCHH
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHH
Confidence 23457899999999999888999999999999999999999998765433322221111 11234456688
Q ss_pred HHHHHHHHccCCCCCCC-----ChHHHHH
Q 011092 288 LVRLASRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
+.+++.+||+.||.+|| ++.++++
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 99999999999999999 6778776
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=352.27 Aligned_cols=244 Identities=20% Similarity=0.228 Sum_probs=203.1
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 56677789999999999995 568999999997654332 35688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 217 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 217 (494)
++ |+|.+++.. ...++++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..........|
T Consensus 136 ~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 136 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp CS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred CC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 97 788887754 2467999999999999999999999999 99999999999999999999999999988777677889
Q ss_pred CCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 218 NLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 218 t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
|+.|+|||++. ...++.++|||||||++|||++|+.||............... ......+...+..+.+|+.+
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~ 288 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 288 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHHHHH
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHH
Confidence 99999999884 467899999999999999999999988654322111111111 11111233456789999999
Q ss_pred HccCCCCCCCChHHHHHH
Q 011092 295 CLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~ 312 (494)
||+.||.+|||+.++++.
T Consensus 289 ~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 289 CLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HTCSSGGGSCCHHHHTTC
T ss_pred HcccChhhCcCHHHHhhC
Confidence 999999999999999873
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=341.72 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=210.5
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
..+++++.||+|+||.||+|...++..||||.+.... ...+.|.+|++++++++||||+++++++.. +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 4677888889999999999998888899999997654 346789999999999999999999999864 56899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 214 (494)
+++|.+++.......+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 999999996433346999999999999999999999999 999999999999999999999999999865432 22
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+++.|+|||.+.+..++.++||||||+++++|++ |..||............... .....+...+..+.+++.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----YRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----cCCCCcccccHHHHHHHH
Confidence 345778999999988889999999999999999999 88887654333222211111 111234456689999999
Q ss_pred HHccCCCCCCCChHHHHHHhcccccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+||+.||.+|||+.++++.|+.+...
T Consensus 245 ~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999988654
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=355.76 Aligned_cols=258 Identities=21% Similarity=0.261 Sum_probs=208.8
Q ss_pred cccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec--CCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~l 133 (494)
.+++++.||+|+||.||+|.+ .++..||||++........+.+.+|++++++++||||+++++++.. .+..++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 577888889999999999984 3578999999987654445679999999999999999999999874 456889
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+++++|.+++... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 104 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp EEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred EEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999999999642 346999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc----------ccccccccc
Q 011092 213 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------LQMLTDSCL 276 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~----------~~~~~~~~~ 276 (494)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||............ .........
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 2335677899999998888999999999999999999999887654332211100 000111111
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
....+..++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 262 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 262 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 22335566789999999999999999999999999999886653
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-44 Score=344.82 Aligned_cols=259 Identities=18% Similarity=0.220 Sum_probs=204.6
Q ss_pred HhcCCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCc
Q 011092 55 ATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 55 ~~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 130 (494)
....+..+++++.||+|+||.||+|... +++.||||++....... .+.+.+|+.++.+++||||+++++++..++.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 2h34_A 29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ 108 (309)
T ss_dssp -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence 3445678888999999999999999964 68899999997643322 3678899999999999999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++|++|.+++.. ..++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 109 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 109 LYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999999974 356999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 211 DG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 211 ~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
.. ....+++.|+|||.+.+..++.++||||||+++|+|++|+.||.................. ....+..++
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 262 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR---PSTVRPGIP 262 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC---GGGTSTTCC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC---ccccCCCCC
Confidence 32 2346889999999999888999999999999999999999998776544332221111111 112234556
Q ss_pred HHHHHHHHHHccCCCCCCC-ChHHHHHHhcccccc
Q 011092 286 TELVRLASRCLQYEPRERP-NPKSLVTALSPLQKE 319 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rp-s~~~vl~~L~~~~~~ 319 (494)
..+.+++.+||+.||.+|| |++++++.|+.....
T Consensus 263 ~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 263 VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 7899999999999999999 999999999887554
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=355.34 Aligned_cols=243 Identities=20% Similarity=0.207 Sum_probs=196.2
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC---CChHHHHHHHHH-HhccCCCCCccEEEEEecCCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARS-VGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+++++++.||+|+||.||+|+.. ++..||||+++.... .....+..|..+ ++.++||||+++++++...+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 456788888899999999999964 588999999975432 224456777776 567899999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC---
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--- 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 210 (494)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999974 356899999999999999999999999 9999999999999999999999999997532
Q ss_pred -CCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 211 -DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 211 -~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
......||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++..++..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~ 267 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSAR 267 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHHHH
Confidence 234567899999999999888999999999999999999999998765444333222211 1123445668899
Q ss_pred HHHHHHccCCCCCCCChHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLV 310 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl 310 (494)
+||.+||+.||.+||++.+.+
T Consensus 268 ~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 268 HLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp HHHHHHTCSSGGGSTTTTTTH
T ss_pred HHHHHHcccCHHhCCCCCCCH
Confidence 999999999999999986433
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=354.24 Aligned_cols=251 Identities=18% Similarity=0.254 Sum_probs=200.7
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCE----EEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.+++++.||+|+||+||+|.+. ++.. ||+|.+.... ....+.|.+|+.++++++||||+++++++..+ ..++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v 94 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 94 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEE
Confidence 5677788899999999999953 4543 5888886433 23467899999999999999999999999875 47899
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp EECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999999975 3467999999999999999999999999 9999999999999999999999999987654321
Q ss_pred -----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 214 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 214 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
...+|+.|+|||++.+..++.++||||||+++|||+| |+.||.......+...... ......+...+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 247 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-----GERLPQPPICTID 247 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTBCHH
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc-----CCCCCCCccCCHH
Confidence 2345779999999998899999999999999999999 8888865433222211111 1111234456678
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 248 ~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999887654
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=343.36 Aligned_cols=252 Identities=20% Similarity=0.312 Sum_probs=194.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+.+.+.||+|+||+||+|.... .||||+++...... .+.|.+|+.++++++||||+++++++ ..+..++||||+
T Consensus 25 ~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~ 101 (289)
T 3og7_A 25 QITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWC 101 (289)
T ss_dssp SCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred ceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEec
Confidence 46677788999999999998643 59999997654322 46789999999999999999999976 456789999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC------C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 212 (494)
++++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 102 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 102 EGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp CEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred CCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 99999999964 3457999999999999999999999999 99999999999999999999999999875432 1
Q ss_pred CccccCCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-HhhhccccccccccccCCCCchhHHHH
Q 011092 213 KSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
....||+.|+|||.+. +..++.++||||||+++|+|++|+.||...... .+.......... .........++..+
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 258 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-PDLSKVRSNCPKRM 258 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC-CCTTSSCTTSCHHH
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC-cchhhccccCCHHH
Confidence 2346899999999986 566888999999999999999999998653221 111111111111 11122334566899
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 259 ~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 259 KRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999988754
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=357.76 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=205.5
Q ss_pred CccccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 130 (494)
...+++++.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 34567778889999999999983 23578999999764322 245699999999999 89999999999987654
Q ss_pred -cceeeecCCCCCHHHHhcccCC---------------------------------------------------------
Q 011092 131 -RLLVAEYMPNETLAKHLFHWET--------------------------------------------------------- 152 (494)
Q Consensus 131 -~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 152 (494)
.++||||++||+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 8999999999999999975321
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC------CccccCC
Q 011092 153 -------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNL 219 (494)
Q Consensus 153 -------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~ 219 (494)
..+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~ 259 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence 12889999999999999999999999 999999999999999999999999999865332 2345678
Q ss_pred CcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC
Q 011092 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298 (494)
Q Consensus 220 ~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 298 (494)
.|+|||++.+..++.++||||||+++|||+| |..||............... ......+...+.++.+++.+||+.
T Consensus 260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~ 335 (359)
T 3vhe_A 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE----GTRMRAPDYTTPEMYQTMLDCWHG 335 (359)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHccC
Confidence 9999999998889999999999999999998 99888654322111111111 111223445567899999999999
Q ss_pred CCCCCCChHHHHHHhccccc
Q 011092 299 EPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 299 dp~~Rps~~~vl~~L~~~~~ 318 (494)
||.+|||+.++++.|+.+..
T Consensus 336 dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 336 EPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp SGGGSCCHHHHHHHHHHHHH
T ss_pred ChhhCCCHHHHHHHHHHHHH
Confidence 99999999999999987754
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=371.64 Aligned_cols=251 Identities=24% Similarity=0.336 Sum_probs=211.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
.+++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.. +..+|||||+++
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~ 345 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 345 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred hhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcC
Confidence 466778889999999999998877889999998654 346789999999999999999999999976 678999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Ccc
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSY 215 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 215 (494)
|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 346 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 424 (535)
T 2h8h_A 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424 (535)
T ss_dssp EEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCST
T ss_pred CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCC
Confidence 99999997544456999999999999999999999999 999999999999999999999999999865432 233
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.+++.|+|||++.+..++.++|||||||++|||+| |+.||.......+....... .....+..++..+.+||.+
T Consensus 425 ~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~~ 499 (535)
T 2h8h_A 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMCQ 499 (535)
T ss_dssp TSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHH
T ss_pred cCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHH
Confidence 45788999999988889999999999999999999 88888664333222211111 1112344566889999999
Q ss_pred HccCCCCCCCChHHHHHHhcccccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
||+.||.+|||+.+|++.|+.+...
T Consensus 500 cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 500 CWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HcCCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999988654
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=343.54 Aligned_cols=254 Identities=21% Similarity=0.329 Sum_probs=213.5
Q ss_pred CccccccccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
...+++.+.||+|+||.||+|.... +..||+|.+.... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 3456778888999999999999654 8899999997543 3467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
++|++|.+++.......+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 99999999997655677999999999999999999999999 9999999999999999999999999998655332
Q ss_pred -ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 214 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.............. ......+..++..+.++
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l 244 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----DYRMERPEGCPEKVYEL 244 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----cCCCCCCCCCCHHHHHH
Confidence 2345678999999998889999999999999999999 8888765433222221111 11122344566889999
Q ss_pred HHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 292 ASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.+||+.||.+|||+.++++.|+.+...
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=351.18 Aligned_cols=255 Identities=18% Similarity=0.269 Sum_probs=195.4
Q ss_pred cccccccCCCCCCCeEEEEEEcC-CC---EEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCcc---
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-QR---RIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--- 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~--- 131 (494)
.+.+++.||+|+||.||+|.... +. .||||+++.... ...+.|.+|+.++++++||||+++++++...+..
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 46677788999999999999543 33 899999976532 2356799999999999999999999999887655
Q ss_pred ---ceeeecCCCCCHHHHhcccC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccC
Q 011092 132 ---LLVAEYMPNETLAKHLFHWE----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204 (494)
Q Consensus 132 ---~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 204 (494)
++||||+++++|.+++.... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeecc
Confidence 99999999999999986422 226999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccccccccc
Q 011092 205 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 205 la~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (494)
+++...... ...+++.|+|||.+.+..++.++||||||+++|+|++ |..||............... ..
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~ 257 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-----NR 257 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CC
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC-----CC
Confidence 997653322 2345678999999998889999999999999999999 88877654332222111111 11
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCC
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~ 321 (494)
...+...+..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 258 LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 12344566889999999999999999999999999998876543
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=349.61 Aligned_cols=252 Identities=17% Similarity=0.227 Sum_probs=198.3
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCcc----
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER---- 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~---- 131 (494)
..+++++.||+|+||.||+|.. .+++.||||++....... ...|.+|+.++.+++||||+++++++......
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 3577888889999999999995 568999999998754433 34688999999999999999999999876544
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||++|++|.+++.. ..++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999974 356999999999999999999999999 99999999999999999999999999876433
Q ss_pred C-------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 212 G-------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 212 ~-------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
. ....||+.|+|||++.+..++.++||||||+++|+|+||+.||................... .......+
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCC
Confidence 2 23457999999999998889999999999999999999999987654333222111111000 00112235
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHH-HHhccc
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLV-TALSPL 316 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl-~~L~~~ 316 (494)
+.++.+++.+||+.||.+||+..+++ ..|...
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 57899999999999999999766655 444444
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=351.87 Aligned_cols=244 Identities=21% Similarity=0.249 Sum_probs=188.8
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+++.+.||+|+||.||+|... +++.||||+++... ..+.+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 3667778899999999999965 58899999997643 34678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccCCcccCCCC---C
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---K 213 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~---~ 213 (494)
|++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... .
T Consensus 132 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 999999996 3456999999999999999999999999 999999999999975 899999999998865432 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-hhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...||+.|+|||++.+..++.++|||||||++|+|++|..||....... .......... ..........+..+.+|+
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li 286 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY--YFISPWWDEVSLNAKDLV 286 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC--ccCCchhhhCCHHHHHHH
Confidence 4568999999999998889999999999999999999999986543221 1111111100 011112335668899999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.||.+|||+.++++
T Consensus 287 ~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 287 RKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCcCHHHHhc
Confidence 9999999999999999988
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-44 Score=358.50 Aligned_cols=251 Identities=18% Similarity=0.166 Sum_probs=204.9
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
...++++++.||+|+||+||+|+.. +++.||||+++.. .......+.+|+.++..++||||++++++|.+.+..++
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence 3345667778899999999999965 4889999999642 11223458899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||++||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 152 V~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp EECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 9999999999999974 2467999999999999999999999999 999999999999999999999999999765433
Q ss_pred ----CccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCch
Q 011092 213 ----KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
....||+.|+|||++. ...++.++|||||||++|||++|+.||..................... ......
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~ 308 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PTQVTD 308 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC-CSSCCC
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccC-Cccccc
Confidence 2357899999999986 456899999999999999999999999765443333222211111111 111234
Q ss_pred hHHHHHHHHHHHccCCCCC--CCChHHHHH
Q 011092 284 DGTELVRLASRCLQYEPRE--RPNPKSLVT 311 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~--Rps~~~vl~ 311 (494)
++.++.+||.+||..+|++ ||+++++++
T Consensus 309 ~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 309 VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 6688999999999988888 999999986
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=342.38 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=196.6
Q ss_pred ccccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
..+++.+.||+|+||.||+|.... +..||+|.+...... ..+.|.+|+.++++++||||+++++++. ++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 467788888999999999999632 457999998764322 2457899999999999999999999985 4678999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 214 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 214 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............... .....+..++..+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC-----CCCCCCCCCCHHH
Confidence 2345678999999988889999999999999999997 88787654322221111110 1112344567899
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999987754
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-44 Score=348.63 Aligned_cols=243 Identities=17% Similarity=0.271 Sum_probs=194.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCc--------
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-------- 130 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-------- 130 (494)
.+++++.||+|+||.||+|... +|+.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 5677788899999999999965 6999999999754433 35779999999999999999999999866432
Q ss_pred -------------------------------------------------cceeeecCCCCCHHHHhcccCC-CCCCHHHH
Q 011092 131 -------------------------------------------------RLLVAEYMPNETLAKHLFHWET-HPMKWAMR 160 (494)
Q Consensus 131 -------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~ 160 (494)
.++||||++|++|.+++..... ...++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 7899999999999999975322 34567788
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----------------CccccCCCcCCC
Q 011092 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------------KSYSTNLAFTPP 224 (494)
Q Consensus 161 ~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------------~~~~~t~~y~aP 224 (494)
+.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+||
T Consensus 167 ~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 999999999999999999 999999999999999999999999998865432 234689999999
Q ss_pred cCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCC
Q 011092 225 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304 (494)
Q Consensus 225 E~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 304 (494)
|++.+..++.++||||||+++|+|++|..|+.... ....... ... ........++.+.+++.+||+.||.+||
T Consensus 246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~~~~~~~-~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp 318 (332)
T 3qd2_B 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-RIITDVR-NLK-----FPLLFTQKYPQEHMMVQDMLSPSPTERP 318 (332)
T ss_dssp HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-HHHHHHH-TTC-----CCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-HHHHHhh-ccC-----CCcccccCChhHHHHHHHHccCCCCcCC
Confidence 99998899999999999999999999976532211 1111100 000 0001123446789999999999999999
Q ss_pred ChHHHHH
Q 011092 305 NPKSLVT 311 (494)
Q Consensus 305 s~~~vl~ 311 (494)
|+.++++
T Consensus 319 s~~~~l~ 325 (332)
T 3qd2_B 319 EATDIIE 325 (332)
T ss_dssp CHHHHHH
T ss_pred CHHHHhh
Confidence 9999997
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=344.67 Aligned_cols=255 Identities=15% Similarity=0.139 Sum_probs=207.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+.+++.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.++..+ +|+||+++++++..+...++||||+
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 467778889999999999995 568999999987543 345688999999999 8999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC-----eEEcccCCcccCCCC-
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG- 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~- 212 (494)
+++|.+++.. ...++++..+..|+.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++.....
T Consensus 89 -~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 89 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 8999999974 2456999999999999999999999999 999999999999987765 999999998765432
Q ss_pred ----------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh---HHhhhccccccccccccCC
Q 011092 213 ----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 213 ----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~ 279 (494)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ............. .....
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS-TPLRE 244 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-SCHHH
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-ccHHH
Confidence 234689999999999988899999999999999999999999865211 1000000000000 00001
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCC
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~ 321 (494)
....++..+.+++.+||+.||.+|||+.+|++.|+.+.....
T Consensus 245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 122455789999999999999999999999999998876543
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=361.75 Aligned_cols=243 Identities=19% Similarity=0.263 Sum_probs=206.6
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 45778888899999999999964 69999999996432 223567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||++||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~ 172 (476)
T 2y94_A 96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172 (476)
T ss_dssp ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence 9999999999996 3467999999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.......+........ ...+...+.++.+|
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~L 246 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVISL 246 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHHH
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHHH
Confidence 34578999999999988765 679999999999999999999987654433322221111 12234456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCchhCcCHHHHHh
Confidence 99999999999999999987
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=358.40 Aligned_cols=246 Identities=14% Similarity=0.134 Sum_probs=191.6
Q ss_pred ccccc-ccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEec----CCccce
Q 011092 61 VENIV-SEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE----GDERLL 133 (494)
Q Consensus 61 ~~~~i-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~----~~~~~l 133 (494)
.+.++ +.||.|+||+||++... +|+.||||++.. ...+.+|+.++.++ +||||+++++++.. .+..|+
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 45555 46899999999999954 589999999963 35678899988555 89999999999875 567899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccCCcccCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSR 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 210 (494)
||||++||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999999997644457999999999999999999999999 999999999999997 7899999999998654
Q ss_pred CC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc--cccCCCCchhH
Q 011092 211 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDG 285 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 285 (494)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|..||...............+... .........++
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 295 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSC
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCC
Confidence 32 34567999999999998899999999999999999999999986542111000000000000 01111123466
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
.++.+||.+||+.||.+|||+.++++.
T Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 296 EEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 889999999999999999999999983
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=347.24 Aligned_cols=252 Identities=21% Similarity=0.282 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEEEcC-----CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.+.+.+.||+|+||.||+|.... +..||||.++..... ....|.+|+.++.+++||||+++++++...+..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45667788999999999998532 235999999764322 245688999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 125 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999999964 3457999999999999999999999999 9999999999999999999999999988654321
Q ss_pred ------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 214 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 214 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.......+....... .....+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 277 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-----FRLPTPMDCPS 277 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTCBH
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC-----CcCCCcccCCH
Confidence 2234678999999998889999999999999999999 98888654333222211111 11122345668
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+.+++.+||+.||.+||++.++++.|+.+...
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 899999999999999999999999999887654
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=351.56 Aligned_cols=255 Identities=21% Similarity=0.276 Sum_probs=205.4
Q ss_pred ccccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCC-CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~ 131 (494)
..+.+.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.++.++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4567778889999999999995 235689999997543 23357899999999999 999999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccce
Q 011092 132 LLVAEYMPNETLAKHLFHWET---------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Ni 190 (494)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NI 203 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 203 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhE
Confidence 999999999999999975322 24799999999999999999999999 99999999999
Q ss_pred eecCCCCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHh
Q 011092 191 LFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLI 263 (494)
Q Consensus 191 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~ 263 (494)
|++.++.+||+|||++....... ...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||........
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 283 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence 99999999999999987553322 2345778999999988889999999999999999998 8888865432111
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 264 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
...... .......+...+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 284 ~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 284 FYKLIQ----NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp HHHHHH----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHh----cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111111 1111223445568999999999999999999999999999887654
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=345.81 Aligned_cols=256 Identities=23% Similarity=0.301 Sum_probs=207.9
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCE--EEEEEecCCC-CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRR--IAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv 134 (494)
..+++++.||+|+||.||+|.. .++.. ||||.++... ....+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4567778889999999999994 45664 4999987533 23456799999999999 999999999999999999999
Q ss_pred eecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEE
Q 011092 135 AEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 200 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 200 (494)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEE
Confidence 99999999999997432 247999999999999999999999999 999999999999999999999
Q ss_pred cccCCcccCCC---CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccc
Q 011092 201 STFGLMKNSRD---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 276 (494)
Q Consensus 201 ~Dfgla~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
+|||+++.... .....+++.|+|||++.+..++.++||||||+++|+|+| |+.||............... .
T Consensus 184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-----~ 258 (327)
T 1fvr_A 184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-----Y 258 (327)
T ss_dssp CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-----C
T ss_pred cccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC-----C
Confidence 99999874332 223456789999999988889999999999999999998 99888665443332222111 1
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCC
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~ 321 (494)
....+..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 122344566889999999999999999999999999998876543
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=344.32 Aligned_cols=246 Identities=17% Similarity=0.192 Sum_probs=204.9
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+++++.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++.+++||||+++++++...+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4677788899999999999964 5899999999764322 25679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC----CeEEcccCCcccC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 209 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 209 (494)
||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 999999999999996 3457999999999999999999999999 99999999999999887 7999999999865
Q ss_pred CCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 210 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 210 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
... ....||+.|+|||++.+..++.++||||||+++|+|++|..||.................. .....+...+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc--cChhhhcccCH
Confidence 543 3456899999999999888999999999999999999999998765433222211111000 00011123457
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+++.+||+.||.+|||+.++++
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 8999999999999999999999997
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=341.37 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=202.3
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC-Cccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-~~~~lv~e~ 137 (494)
+..+++++.||+|+||.||++.. +|+.||||+++... ..+.|.+|+.++.+++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 45778888899999999999987 47899999997543 467899999999999999999999997654 478999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Cccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 216 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 216 (494)
+++++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 175 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence 99999999997543344899999999999999999999999 999999999999999999999999998765433 3345
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
+++.|+|||.+.+..++.++||||||+++|+|+| |..||............... .....+...+..+.+++.+|
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~ 250 (278)
T 1byg_A 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPAVYEVMKNC 250 (278)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-----CCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCcccCCHHHHHHHHHH
Confidence 6889999999988889999999999999999998 88887654332222111111 11233445678999999999
Q ss_pred ccCCCCCCCChHHHHHHhccccc
Q 011092 296 LQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
|+.||.+|||+.++++.|+.+..
T Consensus 251 l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 251 WHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCChhhCCCHHHHHHHHHHHHh
Confidence 99999999999999999988754
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=347.79 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=209.2
Q ss_pred ccccccccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 129 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 129 (494)
..+.+.+.||+|+||.||+|... ++..||||+++..... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 46777888899999999999853 4678999999764322 245788999999999 9999999999999999
Q ss_pred ccceeeecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCC
Confidence 99999999999999999975321 24899999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~ 268 (494)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.......+.....
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 273 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh
Confidence 99999999999865432 23345788999999988889999999999999999999 888886654333222111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.. .....+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 274 ~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 274 EG-----HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cC-----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11 11123445668899999999999999999999999999988654
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=349.47 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=207.2
Q ss_pred ccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccce
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 133 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~l 133 (494)
+++++.||+|+||+||++.+ .+++.||||+++..... ..+.+.+|+.++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 37788899999999998864 25789999999765322 245689999999999999999999999874 56799
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
||||+++++|.+++.. ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999953 45999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh----------ccccccccccc
Q 011092 214 -------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNLQMLTDSCL 276 (494)
Q Consensus 214 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~----------~~~~~~~~~~~ 276 (494)
...+|..|+|||++.+..++.++||||||+++|+|+||+.|+.......... ...........
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 3356788999999998889999999999999999999998875432221100 00111111112
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
....+..++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 22344566789999999999999999999999999999886653
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=346.20 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=209.0
Q ss_pred ccccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~ 131 (494)
..+.+.+.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.++.++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 3567778889999999999984 24679999999765422 246789999999999 999999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCC----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 132 LLVAEYMPNETLAKHLFHWET----------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCC
Confidence 999999999999999975332 25899999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~ 268 (494)
+.+||+|||++....... ...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||.............
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 261 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence 999999999988655432 2345678999999988889999999999999999999 888876543211111111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.. ......+...+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 262 ~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 262 KE----GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HH----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc----CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11 111122345568899999999999999999999999999887653
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=340.27 Aligned_cols=249 Identities=16% Similarity=0.197 Sum_probs=199.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-----CChHHHHHHHHHHhccC---CCCCccEEEEEecCC--
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-----PDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGD-- 129 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~-- 129 (494)
.|++++.||+|+||+||+|.. .+++.||||++..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~ 89 (308)
T 3g33_A 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD 89 (308)
T ss_dssp CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence 567778889999999999994 5689999999964321 12456778888888774 999999999998765
Q ss_pred ---ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 130 ---ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 130 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
..++||||+. ++|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 90 REIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp SEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred CceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 4789999997 69999997655556999999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc---c--------
Q 011092 207 KNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---T-------- 272 (494)
Q Consensus 207 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~---~-------- 272 (494)
+..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||................ .
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 247 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 247 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSC
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchh
Confidence 765433 34568999999999998899999999999999999999999986653332211111100 0
Q ss_pred ---cccccC-------CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 ---DSCLEG-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 ---~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...... ......+..+.+|+.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 248 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 000000 011245678999999999999999999999987
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-44 Score=345.32 Aligned_cols=239 Identities=20% Similarity=0.237 Sum_probs=194.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+++++.||+|+||+||+|... +|+.||||++....... ...+..|+..+.++ +||||++++++|..++..++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 4667778899999999999965 69999999986543322 33456666666666 99999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---C
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---K 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 213 (494)
|+ +++|.+++... ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 68999988653 457999999999999999999999999 999999999999999999999999998765433 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-HHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...||+.|+|||++.+ .++.++|||||||++|||++|..||..... ..+.... ... ..+...+..+.+++
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~l~~li 285 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY----LPP----EFTAGLSSELRSVL 285 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTC----CCH----HHHTTSCHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccC----CCc----ccccCCCHHHHHHH
Confidence 4468999999999885 789999999999999999999876654322 2121111 111 11234557899999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.||.+|||+.++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHSCSSTTTSCCHHHHHT
T ss_pred HHHcCCChhhCcCHHHHHh
Confidence 9999999999999999987
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=345.64 Aligned_cols=255 Identities=18% Similarity=0.296 Sum_probs=204.3
Q ss_pred cccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecC--Cccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~ 132 (494)
.+++++.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+.++..++||||+++++++... +..+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 367778889999999999983 358899999997543 23467899999999999999999999999876 5689
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 102 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999999999964 3456999999999999999999999999 999999999999999999999999999865433
Q ss_pred -------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh----------cccccccccc
Q 011092 213 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNLQMLTDSC 275 (494)
Q Consensus 213 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~----------~~~~~~~~~~ 275 (494)
....+|..|+|||++.+..++.++||||||+++|+|+||..|+.......... ..........
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 23456778999999988889999999999999999999987653321111000 0000001111
Q ss_pred ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 276 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 276 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.....+..++..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 122334566789999999999999999999999999998763
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=338.66 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=204.3
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+..+.+++.||+|+||.||+|... ++..||||++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3456788888999999999999954 57899999985421 1235678899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999999874 356999999999999999999999999 999999999999999999999999988654432
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....+++.|+|||.+.+..++.++||||||+++|+|++|..||.............. .....+...+..+.+|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l 237 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDL 237 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHH
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHH
Confidence 345789999999999988899999999999999999999999876544332221111 1112344566889999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 238 i~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHH
T ss_pred HHHHhccChhhCCCHHHHhh
Confidence 99999999999999999997
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-44 Score=352.55 Aligned_cols=257 Identities=15% Similarity=0.165 Sum_probs=202.4
Q ss_pred ccccccccCCCCCCCeEEEEEEcC------CCEEEEEEecCCCCCC-----------hHHHHHHHHHHhccCCCCCccEE
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWPD-----------PRQFLEEARSVGQLRNNRLTNLL 122 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~hpnIv~l~ 122 (494)
..+.+++.||+|+||.||+|.+.. ++.||||++....... ...+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 367788888999999999999654 4789999987643110 12244556667778899999999
Q ss_pred EEEecC----CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec--CCC
Q 011092 123 GCCCEG----DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDG 196 (494)
Q Consensus 123 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~--~~~ 196 (494)
+++... ...++||||+ |++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCC
Confidence 999775 4489999999 9999999975 3467999999999999999999999999 99999999999999 889
Q ss_pred CeEEcccCCcccCCCC-----------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh--
Q 011092 197 NPRLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-- 263 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~-- 263 (494)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999754321 234489999999999988899999999999999999999999874321110
Q ss_pred ---h---hccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCCC
Q 011092 264 ---R---DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322 (494)
Q Consensus 264 ---~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~ 322 (494)
. ......+.+.++. ....+.++.+++..||+.||.+||++.+|++.|+.+......
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 0 0111112222221 124457899999999999999999999999999988765443
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=342.54 Aligned_cols=262 Identities=18% Similarity=0.227 Sum_probs=202.9
Q ss_pred CCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+..+++++.||+|+||.||+|.. .+|..||||++....... ...+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 445678888899999999999995 568999999997643333 4568899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
||||+++++|.+++... ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++.....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999998642 3467999999999999999999999999 99999999999999999999999999876543
Q ss_pred C----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 212 G----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 212 ~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
. ....+++.|+|||++.+..++.++||||||+++|+|++|..||........... ..+.........+...+.+
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 266 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSEE 266 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSCHH
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccCHH
Confidence 2 234678999999999988899999999999999999999998865422110000 0000001111112345678
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhccccccCCC
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~ 322 (494)
+.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 267 l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 267 LRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999776443
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=339.72 Aligned_cols=246 Identities=16% Similarity=0.192 Sum_probs=203.1
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+.+++.||+|+||.||++... +|+.||||+++.......+.+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS 89 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence 4667788899999999999964 689999999986554445678999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee---cCCCCeEEcccCCcccCCCC--Cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG--KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--~~ 214 (494)
+++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||++ +.++.+||+|||++...... ..
T Consensus 90 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (304)
T 2jam_A 90 GGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166 (304)
T ss_dssp SCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHH
T ss_pred CccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccc
Confidence 9999999864 356999999999999999999999999 9999999999999 78899999999998765432 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+|+.|+|||++.+..++.++||||||+++|+|++|..||................. ......+...+..+.+++.+
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~ 244 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFICH 244 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHHH
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHHH
Confidence 4589999999999988899999999999999999999999876543322221111111 11112234566889999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.||.+|||+.++++
T Consensus 245 ~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 245 LLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHCSSTTTSCCHHHHHT
T ss_pred HcCCChhHCcCHHHHhc
Confidence 99999999999999986
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=336.03 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=187.0
Q ss_pred cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
..+..+.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++.+++||||+++++++...+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 3456778888899999999999995 568999999996431 223567899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++.. ...++++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999864 2357999999999999999999999999 999999999999999999999999998865422
Q ss_pred ----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 213 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.............. . ....+...+.++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL----A--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS----S--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh----c--ccCCccccCHHH
Confidence 245688999999999988899999999999999999999998865432211111110 0 112344566889
Q ss_pred HHHHHHHccCCCCCCCChHHHHH
Q 011092 289 VRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+++.+||+.||.+|||+.++++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHcccCHhhCCCHHHHhc
Confidence 99999999999999999999987
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=336.88 Aligned_cols=247 Identities=19% Similarity=0.224 Sum_probs=204.7
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..+++++.||+|+||.||+|... +|..||+|++...... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45778888899999999999954 5899999999754322 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC---eEEcccCCcccCCCCC
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDGK 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~~ 213 (494)
|+++++|.+.+.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++. +||+|||++.......
T Consensus 86 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 86 LVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9999999988864 356999999999999999999999999 999999999999976655 9999999997665433
Q ss_pred ---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 214 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
...+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.................. .........+..+.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKS 240 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHHH
Confidence 356899999999999888999999999999999999999998765443332222111111 111112345678999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||+.||.+|||+.++++
T Consensus 241 li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHcccChhhCCCHHHHhc
Confidence 999999999999999999987
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=338.82 Aligned_cols=251 Identities=22% Similarity=0.270 Sum_probs=202.6
Q ss_pred cccccCCCCCCCeEEEEEE-cCCC---EEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCcc-ceeee
Q 011092 63 NIVSEHGEKAPNVVYKGKL-ENQR---RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER-LLVAE 136 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~-~~~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~lv~e 136 (494)
.+.+.||+|+||+||+|.. .++. .||+|.+...... ..+.|.+|+.++++++||||+++++++...+.. ++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 3446779999999999984 3333 7999999764322 246789999999999999999999999876655 99999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
|+.+++|.+++.. ....+++..+..|+.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 104 ~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 104 YMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred cccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 9999999999964 3467899999999999999999999999 99999999999999999999999999975432
Q ss_pred ---CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-HHhhhccccccccccccCCCCchhHHH
Q 011092 212 ---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 212 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
.....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+..... ......... ......+...+..
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 256 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ-----GRRLPQPEYCPDS 256 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT-----TCCCCCCTTCCHH
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc-----CCCCCCCccchHH
Confidence 2234567899999999988999999999999999999997666543211 111111101 0111223445678
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887654
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=340.43 Aligned_cols=254 Identities=20% Similarity=0.251 Sum_probs=208.6
Q ss_pred cccccc-cCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 61 VENIVS-EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 61 ~~~~i~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
.+.+++ .||+|+||.||+|... ++..||||+++..... ..+.+.+|+.++.+++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 455665 7899999999999853 5778999999765322 256789999999999999999999999 456789999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999864 3456999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHH
Q 011092 213 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
....+|+.|+|||++.+..++.++||||||+++|+|+| |..||............... .....+..++..
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 241 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-----KRMECPPECPPE 241 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT-----CCCCCCTTCCHH
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC-----CcCCCCCCcCHH
Confidence 22345788999999988889999999999999999999 99888654332222111111 112334566789
Q ss_pred HHHHHHHHccCCCCCCCChHHHHHHhccccccCCC
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~ 322 (494)
+.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 242 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 242 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999988765443
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=344.80 Aligned_cols=250 Identities=20% Similarity=0.195 Sum_probs=206.3
Q ss_pred CHHHHHHHhcCC-ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--------ChHHHHHHHHHHhccCCCC
Q 011092 48 TLEQLKNATSGF-AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--------DPRQFLEEARSVGQLRNNR 117 (494)
Q Consensus 48 ~~~~~~~~~~~~-~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~hpn 117 (494)
.++.+......| ..|++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++|||
T Consensus 11 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (335)
T 3dls_A 11 ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90 (335)
T ss_dssp ECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTT
T ss_pred cccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCC
Confidence 333444444444 3577888889999999999995 56899999999764321 2346788999999999999
Q ss_pred CccEEEEEecCCccceeeecCCCC-CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC
Q 011092 118 LTNLLGCCCEGDERLLVAEYMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196 (494)
Q Consensus 118 Iv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~ 196 (494)
|+++++++...+..++||||+.+| +|.+++. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++
T Consensus 91 Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDF 167 (335)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTS
T ss_pred EeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCC
Confidence 999999999999999999999766 9999986 3457999999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCcccCCCCC---ccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc
Q 011092 197 NPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~~---~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 272 (494)
.+||+|||++....... ...||+.|+|||++.+..+ +.++||||||+++|+|++|..||..... . ...
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~----~~~-- 239 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--T----VEA-- 239 (335)
T ss_dssp CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--G----TTT--
T ss_pred cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--H----Hhh--
Confidence 99999999998665432 4568999999999988776 7899999999999999999998864211 0 000
Q ss_pred cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
....+...+.++.+|+.+||+.||.+|||+.++++.
T Consensus 240 ----~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 ----AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011233456789999999999999999999999983
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=348.15 Aligned_cols=245 Identities=20% Similarity=0.288 Sum_probs=197.9
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCC--CCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRN--NRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~~~~~lv~ 135 (494)
..|++++.||+|+||.||++...+++.||||++....... .+.+.+|+.++.+++| |||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 3577888899999999999998889999999997654322 4678999999999976 99999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
|+ .+++|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57999999974 467999999999999999999999999 99999999999997 678999999999865432
Q ss_pred ---CccccCCCcCCCcCCCC-----------CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccC
Q 011092 213 ---KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ...........
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH---HHHHhcCCccc
Confidence 24568999999999864 56888999999999999999999988653211110 11111222222
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
..+...+..+.+|+.+||+.||.+|||+.++++.
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 3444555789999999999999999999999973
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=368.31 Aligned_cols=250 Identities=18% Similarity=0.250 Sum_probs=207.2
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
...+++++.||+|+||.||+|... +|+.||||++... .......+.+|+.++..++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 345677788899999999999964 6999999999642 223456788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||++||+|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 99999999999997654556999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|+|||++.+..++.++|||||||++|||++|..||...............+. .....++..++.++.+|
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~~~~~p~~~s~~~~dL 419 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVPEEYSERFSPQARSL 419 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cccccCCccCCHHHHHH
Confidence 245789999999999988899999999999999999999999865421100000000000 01123455667899999
Q ss_pred HHHHccCCCCCCC-----ChHHHHH
Q 011092 292 ASRCLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rp-----s~~~vl~ 311 (494)
|.+||+.||.+|| ++.++++
T Consensus 420 I~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 420 CSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HHHhccCCHHHcCCCCCCCHHHHHh
Confidence 9999999999999 6788875
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=336.29 Aligned_cols=245 Identities=18% Similarity=0.196 Sum_probs=203.4
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 4667778899999999999964 478999999987665667889999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee---cCCCCeEEcccCCcccCCCC---C
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG---K 213 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~---~ 213 (494)
+++|.+++.. ...+++..+..|+.|++.||.|||+++ ++||||||+|||+ +.++.+||+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999998864 356999999999999999999999999 9999999999999 78899999999998765433 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...+|+.|+|||.+.+ .++.++||||||+++|+|++|..||.................. .........+..+.+++.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~ 243 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT--FPEKDWLNVSPQAESLIR 243 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCHHHHTTSCHHHHHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCchhhhcCCHHHHHHHH
Confidence 4568999999999875 4899999999999999999999998764433222211111000 000000134578999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||+.||.+|||+.++++
T Consensus 244 ~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 244 RLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHTCSSTTTSCCHHHHTT
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999986
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-44 Score=346.77 Aligned_cols=240 Identities=18% Similarity=0.234 Sum_probs=178.9
Q ss_pred ccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 66 SEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
+.||+|+||+||+|... +++.||||++... ....+.+|+.++..+. ||||+++++++.+++..++||||++||+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 66899999999999964 5899999999653 3567889999999996 99999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC---CeEEcccCCcccCCCC----Cccc
Q 011092 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG----KSYS 216 (494)
Q Consensus 144 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfgla~~~~~~----~~~~ 216 (494)
.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999974 467999999999999999999999999 99999999999997665 7999999999865432 3456
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh---cccccccccc--ccCCCCchhHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNLQMLTDSC--LEGQFTDDDGTELVRL 291 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~l~~l 291 (494)
+|+.|+|||++.+..++.++||||||+++|+|++|..||.......... .....+.... ........++.++.+|
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 250 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence 7899999999998889999999999999999999999986532210000 0000000000 0000112356789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 251 i~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 251 IQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHCCCChhHCCCHHHHhc
Confidence 99999999999999999976
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=357.15 Aligned_cols=251 Identities=19% Similarity=0.168 Sum_probs=203.0
Q ss_pred cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
-...++++++.||+|+||.||+++. .+|+.||||+++... ....+.+.+|+.++..++||||+++++++.+.+..|
T Consensus 58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 137 (412)
T 2vd5_A 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY 137 (412)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 3445677778889999999999996 469999999996421 112345889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||++||+|.+++... +..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 138 LVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 999999999999999743 347999999999999999999999999 999999999999999999999999999865443
Q ss_pred -----CccccCCCcCCCcCCC-------CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCC
Q 011092 213 -----KSYSTNLAFTPPEYLR-------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~-------~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (494)
....||+.|+|||++. ...++.++|||||||++|||++|+.||.................... ....
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~ 294 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS-LPLV 294 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC-CC--
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC-CCcc
Confidence 2357899999999987 35689999999999999999999999976544333222211100000 1112
Q ss_pred CchhHHHHHHHHHHHccCCCCCC---CChHHHHH
Q 011092 281 TDDDGTELVRLASRCLQYEPRER---PNPKSLVT 311 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~R---ps~~~vl~ 311 (494)
+..++.++.+||.+||. +|.+| |+++++++
T Consensus 295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 23466899999999999 99998 58999876
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=339.51 Aligned_cols=246 Identities=18% Similarity=0.296 Sum_probs=204.6
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec------------
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE------------ 127 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------------ 127 (494)
.+++++.||+|+||.||+|... +++.||||.+.... ..+.+|++++.+++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 4566777799999999999965 68999999997543 467899999999999999999998864
Q ss_pred ----CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEccc
Q 011092 128 ----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203 (494)
Q Consensus 128 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 203 (494)
....++||||+++++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcc
Confidence 345799999999999999997655567999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCC
Q 011092 204 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280 (494)
Q Consensus 204 gla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (494)
|++...... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+..... ... .+. ....
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~~-----~~~----~~~~ 236 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-FFT-----DLR----DGII 236 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-HHH-----HHH----TTCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-HHH-----Hhh----cccc
Confidence 998865443 345689999999999988899999999999999999999977543211 111 011 1112
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCC
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~ 321 (494)
+...+..+.+++.+||+.||.+|||+.++++.|+.+....+
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 33455789999999999999999999999999998876543
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=334.51 Aligned_cols=246 Identities=16% Similarity=0.179 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+.+.+.||+|+||.||++.. .++..||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 466778889999999999995 458999999997643 234678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee---cCCCCeEEcccCCcccCCCC-
Q 011092 139 PNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 139 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~- 212 (494)
++++|.+++... ....+++..+..|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999988642 2467999999999999999999999999 9999999999999 45688999999999765432
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....+|+.|+|||.+. ..++.++||||||+++|+|++|+.||.................... ......++.+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA---VECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---C--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccc---cccCcCCHHHHH
Confidence 3456899999999986 5688999999999999999999999876554433322211111110 111224578999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||+.||.+|||+.++++
T Consensus 258 li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999986
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=357.12 Aligned_cols=254 Identities=18% Similarity=0.237 Sum_probs=186.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC-----Ccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~~~ 131 (494)
..+++++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+|+.++|||||++++++... +..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4578889999999999999995 46899999999654322 246789999999999999999999999543 468
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
|+||||+. ++|.+++. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999985 89999886 3467999999999999999999999999 99999999999999999999999999986532
Q ss_pred C-------------------------------CccccCCCcCCCcCC-CCCCCCCCCCchhHHHHHHHHHh---------
Q 011092 212 G-------------------------------KSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLS--------- 250 (494)
Q Consensus 212 ~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~sDv~slG~vl~ellt--------- 250 (494)
. ....||+.|+|||++ .+..++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1 234678999999976 45669999999999999999999
Q ss_pred --CCCCCCCchhH---------------------Hhhh----------------------cccccccc--ccccCCCCch
Q 011092 251 --GKHIPPSHALD---------------------LIRD----------------------RNLQMLTD--SCLEGQFTDD 283 (494)
Q Consensus 251 --g~~p~~~~~~~---------------------~~~~----------------------~~~~~~~~--~~~~~~~~~~ 283 (494)
|+++|++.... .+.. .....+.. ..........
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 55555443210 0000 00000000 0000011123
Q ss_pred hHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 284 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+.++.+||.+||..||.+|||+.++++ ..+...
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~--Hp~f~~ 402 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLA--HPFFKE 402 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGTT
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhc--CHhhhh
Confidence 4678999999999999999999999998 555443
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=344.33 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=206.5
Q ss_pred cccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+.+.+.||+|+||.||+|... ++..||||.+...... ....|.+|+.+++.++||||+++++++..++..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 4667777899999999999853 3678999999754321 24568899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCC
Q 011092 134 VAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
||||+++++|.+++.... ..++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999999986421 146799999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccC
Q 011092 206 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 206 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
++..... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..||................ ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~ 259 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-----LL 259 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-----CC
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC-----cC
Confidence 8754322 22345788999999988889999999999999999999 777776543332222111110 11
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
..+..++..+.+++.+||+.||.+|||+.++++.|+....
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 2244566889999999999999999999999999988754
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=347.16 Aligned_cols=255 Identities=18% Similarity=0.157 Sum_probs=197.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCCC-----------ChHHHHHHHHHHhccCCCCCccEEEE
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNRLTNLLGC 124 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~hpnIv~l~~~ 124 (494)
..+.+++.||+|+||.||+|... ++..||||++...... ....+.+|+.++..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46778888999999999999964 5789999999765321 12346788899999999999999999
Q ss_pred Eec----CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC--Ce
Q 011092 125 CCE----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NP 198 (494)
Q Consensus 125 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~--~~ 198 (494)
+.. ....++||||+ +++|.+++... ..+++..++.|+.||+.||.|||+++ |+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcE
Confidence 988 67899999999 99999999743 37999999999999999999999999 99999999999998877 99
Q ss_pred EEcccCCcccCCCC-----------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-----
Q 011092 199 RLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----- 262 (494)
Q Consensus 199 kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~----- 262 (494)
||+|||+++..... ....||+.|+|||++.+..++.++||||||+++|||+||+.||.......
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999754321 23468999999999998889999999999999999999999985421111
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 263 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
........+.............+.++.+++.+||+.||.+|||+.+|++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111111111000000011455789999999999999999999999999987643
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=351.44 Aligned_cols=256 Identities=15% Similarity=0.134 Sum_probs=204.6
Q ss_pred ccccccccCCCCCCCeEEEEEEc---------CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCcc----------
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE---------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN---------- 120 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~---------- 120 (494)
..+.+++.||+|+||.||+|... +++.||||++... +.+.+|+.++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 46778888899999999999965 3789999999754 46889999999999999887
Q ss_pred -----EEEEEec-CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC
Q 011092 121 -----LLGCCCE-GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194 (494)
Q Consensus 121 -----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~ 194 (494)
+++++.. ++..++||||+ +++|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 6777776 67789999999 999999997543467999999999999999999999999 999999999999999
Q ss_pred CC--CeEEcccCCcccCCCC-----------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch--
Q 011092 195 DG--NPRLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-- 259 (494)
Q Consensus 195 ~~--~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~-- 259 (494)
++ .+||+|||+++..... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 8999999999754321 23468999999999998889999999999999999999999886542
Q ss_pred hHHhhhcc---ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCCC
Q 011092 260 LDLIRDRN---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322 (494)
Q Consensus 260 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~ 322 (494)
...+.... .................+..+.+|+.+||+.||.+|||+.++++.|+.+......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 11111110 0000000000011123468899999999999999999999999999998776543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=339.83 Aligned_cols=246 Identities=19% Similarity=0.192 Sum_probs=196.0
Q ss_pred ccccc-ccCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIV-SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.|+++ +.||+|+||.||+|. ..+++.||||++..........+.+|+.++.++ +||||+++++++..++..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 45564 568999999999999 456899999999876655678899999999985 799999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC---eEEcccCCcccCCCC--
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~-- 212 (494)
++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999974 356999999999999999999999999 999999999999987766 999999998754321
Q ss_pred ---------CccccCCCcCCCcCCCC-----CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh-----------hhcc
Q 011092 213 ---------KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----------RDRN 267 (494)
Q Consensus 213 ---------~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~-----------~~~~ 267 (494)
....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||........ ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 13358999999999875 4588999999999999999999999865321000 0000
Q ss_pred ccccccccccCCCC----chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 LQMLTDSCLEGQFT----DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+.... ...+ ...+..+.+|+.+||+.||.+|||+.++++
T Consensus 250 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 250 FESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00000000 0111 134578999999999999999999999998
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=370.02 Aligned_cols=245 Identities=20% Similarity=0.262 Sum_probs=202.5
Q ss_pred cCCCCCCCeEEEEEEc---CCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
.||+|+||.||+|.+. ++..||||+++.... ...+.|.+|+.++++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999853 456799999986533 346789999999999999999999999976 56899999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-------cc
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SY 215 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~~ 215 (494)
|.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999964 3456999999999999999999999999 9999999999999999999999999998654321 12
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.+++.|+|||++.+..++.++|||||||++|||+| |+.||.......+...... ......+..++.++.+||.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHH
Confidence 34578999999998899999999999999999998 9988876433322221111 11123445667899999999
Q ss_pred HccCCCCCCCChHHHHHHhcccccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
||+.||.+|||+.+|++.|+.+...
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999987654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=351.11 Aligned_cols=253 Identities=24% Similarity=0.295 Sum_probs=194.9
Q ss_pred cccccccCCCCCCCeEEEEEEc--CC--CEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEec-CCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE--NQ--RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 134 (494)
.+.+.+.||+|+||.||+|... ++ ..||||.++..... ..+.|.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3456678899999999999853 22 36899998754322 35679999999999999999999999765 4578999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999964 3456899999999999999999999999 999999999999999999999999999754322
Q ss_pred ------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhC-CCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 213 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
....+|+.|+|||++.+..++.++||||||+++|||+|| .+||............... .....+..++
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~-----~~~~~p~~~~ 322 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-----RRLLQPEYCP 322 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT-----CCCCCCTTCC
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCC
Confidence 223456789999999988999999999999999999995 5555432211111110000 0112234556
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 323 ~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 323 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 88999999999999999999999999999886653
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=336.30 Aligned_cols=246 Identities=19% Similarity=0.242 Sum_probs=207.3
Q ss_pred cCCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
-....+++++.||+|+||.||+|... ++..||||++.... ......+.+|+.++..++||||+++++++...+..+
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 34457888888999999999999964 57899999985421 223567899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999999974 346999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....+++.|+|||++.+..++.++||||||+++|+|++|..||............... ....+...+..+.+
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 241 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKD 241 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc------ccCCCCcCCHHHHH
Confidence 3456899999999999888999999999999999999999998754333222211111 11234456688999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||+.||.+|||+.++++
T Consensus 242 li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 242 LISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhhcCHhhCCCHHHHhh
Confidence 999999999999999999986
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=335.37 Aligned_cols=241 Identities=17% Similarity=0.207 Sum_probs=202.0
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.+++++.||+|+||+||+|... +++.||||++....... ...+.+|+..+..+ +||||+++++++...+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e 91 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence 4667788899999999999965 68999999998654332 56788999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-------------------
Q 011092 137 YMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------------------- 195 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~------------------- 195 (494)
|++|++|.+++.... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.+
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------C
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 999999999997432 266999999999999999999999999 9999999999999844
Q ss_pred CCeEEcccCCcccCCCCCccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchh-HHhhhcccccccc
Q 011092 196 GNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTD 273 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~-~~~~~~~~~~~~~ 273 (494)
..+||+|||++..........+|+.|+|||++.+. .++.++||||||+++++|++|.+++..... ..+.....
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~----- 245 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRL----- 245 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTCC-----
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCCC-----
Confidence 47999999999887777777899999999999865 466899999999999999999866543321 11211111
Q ss_pred ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+..++..+.+++.+||+.||.+|||+.++++
T Consensus 246 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 246 ----PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1234456688999999999999999999999987
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=344.35 Aligned_cols=249 Identities=19% Similarity=0.291 Sum_probs=195.3
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..|.+++.||+|+||+||+|... +++.||||++....... ...+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46778888999999999999965 68999999997543222 23466899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 82 LD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp CS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred cc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence 97 689888864 3456999999999999999999999999 999999999999999999999999998754422 2
Q ss_pred ccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc---ccc------------
Q 011092 214 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---CLE------------ 277 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~------------ 277 (494)
...+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||..................+ ...
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 3467899999999876 458999999999999999999999987654332211111100000 000
Q ss_pred --C-------CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 --G-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 --~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. .....++..+.+|+.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0 011234578999999999999999999999997
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=342.11 Aligned_cols=255 Identities=18% Similarity=0.241 Sum_probs=203.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec----CCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lv 134 (494)
..+++++.||+|+||.||++.. .+|+.||||++........+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4677888889999999999995 5689999999976544446778999999999999999999999973 3468999
Q ss_pred eecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 135 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
|||+++++|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999998742 3467999999999999999999999999 999999999999999999999999998764321
Q ss_pred -------------CccccCCCcCCCcCCCCCC---CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccc
Q 011092 213 -------------KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276 (494)
Q Consensus 213 -------------~~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
....||+.|+|||.+.+.. ++.++||||||+++|+|++|+.||...... ............
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~ 264 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQL 264 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC-
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccC
Confidence 1234689999999997654 688999999999999999999887431110 000000000011
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
....+...+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 111223456789999999999999999999999999998854
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-43 Score=342.79 Aligned_cols=252 Identities=17% Similarity=0.243 Sum_probs=198.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc--CCCCCccEEEEEecC----Ccccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEG----DERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~hpnIv~l~~~~~~~----~~~~lv 134 (494)
.+++++.||+|+||.||+|... ++.||||++.... ...+.+|.+++..+ +||||+++++++... ...++|
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 4667778899999999999974 8899999996432 44566677776665 999999999999887 678999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCcccccccccceeecCCCCeEEcccCCc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
|||+++|+|.+++.. ..+++..++.++.|++.||.|||++ + |+||||||+|||++.++.+||+|||++
T Consensus 114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999999953 4699999999999999999999998 8 999999999999999999999999999
Q ss_pred ccCCCC--------CccccCCCcCCCcCCCCCCCCCC------CCchhHHHHHHHHHhC----------CCCCCCch---
Q 011092 207 KNSRDG--------KSYSTNLAFTPPEYLRTGRVTPE------SVIYSFGTLLLDLLSG----------KHIPPSHA--- 259 (494)
Q Consensus 207 ~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~------sDv~slG~vl~elltg----------~~p~~~~~--- 259 (494)
+..... ....||+.|+|||++.+...+.. +|||||||++|||+|| ..|+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 755432 23468999999999987766665 9999999999999999 44443211
Q ss_pred --hHHhhhcccccccccccc-CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 260 --LDLIRDRNLQMLTDSCLE-GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 260 --~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
..............+... ...+..++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 011111110000111111 0112367788999999999999999999999999999887654
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=343.49 Aligned_cols=244 Identities=16% Similarity=0.140 Sum_probs=205.3
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
...|.+++.||+|+||.||++... +++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 346778888899999999999964 4889999999754322 245788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 999999999998864 356999999999999999999999999 999999999999999999999999999865422
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||............... ....+...+..+.+
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 270 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAAS 270 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHHH
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 3456899999999999888999999999999999999999998764332221111110 11233455678999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
|+.+||+.||.+|||+.++++
T Consensus 271 li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999987
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=345.15 Aligned_cols=252 Identities=17% Similarity=0.258 Sum_probs=201.8
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCE----EEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
..+++++.||+|+||.||+|.. .++.. ||+|.+.... ....+.+.+|+.++.+++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 4577888889999999999995 34554 5777775433 334678999999999999999999999998754 789
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
|++|+++|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999975 3457999999999999999999999999 999999999999999999999999999765432
Q ss_pred -----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 213 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.......+...... ......+...+.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-----GERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCCH
Confidence 12345778999999998899999999999999999999 8888865433322221111 111123445667
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999988654
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=362.85 Aligned_cols=247 Identities=18% Similarity=0.254 Sum_probs=205.7
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
..+.+++++.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++.+++||||+++++++...+..|+
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 3456777788899999999999964 69999999996432 2345678999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
||||++||+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999999986433 346999999999999999999999999 99999999999999999999999999986543
Q ss_pred C----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccccccccccCCCCch
Q 011092 212 G----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 212 ~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
. ....||+.|+|||++.+..++.++|||||||++|||+||..||..... ..+...... . ...++..
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~----~--~~~~p~~ 415 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE----Q--AVTYPDK 415 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH----C--CCCCCTT
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh----c--ccCCCcc
Confidence 3 234789999999999988899999999999999999999999865421 111111111 1 1234556
Q ss_pred hHHHHHHHHHHHccCCCCCCCCh-----HHHHH
Q 011092 284 DGTELVRLASRCLQYEPRERPNP-----KSLVT 311 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~-----~~vl~ 311 (494)
++..+.+||.+||+.||.+||++ .+++.
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 67899999999999999999975 55654
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=339.33 Aligned_cols=253 Identities=25% Similarity=0.317 Sum_probs=201.5
Q ss_pred ccccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEec-CCccce
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLL 133 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~l 133 (494)
..+++.+.||+|+||+||+|...+ ...||+|.+...... ..+.+.+|+.++++++||||+++++++.. ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356777888999999999998532 236899999764322 24678999999999999999999998654 567899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+++++|.+++.. ....+++..++.|+.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999964 3456899999999999999999999999 999999999999999999999999998755332
Q ss_pred -------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCC-CCchhHHhhhccccccccccccCCCCchh
Q 011092 213 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 213 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+ ............... .....+...
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 257 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-----RRLLQPEYC 257 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-----CCCCCCTTC
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-----CCCCCCccC
Confidence 2334678899999999888999999999999999999965544 332211111111110 111223445
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 258 ~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999988664
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=338.45 Aligned_cols=251 Identities=21% Similarity=0.267 Sum_probs=204.6
Q ss_pred ccccccc-cCCCCCCCeEEEEEE---cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 60 AVENIVS-EHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 60 ~~~~~i~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
..+.+.+ .||+|+||.||+|.. .++..||||+++...... .+.|.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 3566666 789999999999963 236889999997654322 56799999999999999999999999 5667899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 456999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 214 -------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 214 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
...+++.|+|||.+.+..++.++||||||+++|+|+| |..||.......+....... .....+..++
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCC
Confidence 2235688999999988888999999999999999999 99888664433222211111 1122345567
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999987654
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=351.22 Aligned_cols=244 Identities=20% Similarity=0.283 Sum_probs=197.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccC--CCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.|.+++.||+|+||.||++...+++.||||++...... ..+.+.+|+.++.+++ ||||+++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 47788889999999999999777999999999764432 2467899999999996 5999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
+.+++|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 137 -CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp -CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred -cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 457999999974 457899999999999999999999999 99999999999995 589999999999865432
Q ss_pred --CccccCCCcCCCcCCCC-----------CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCC
Q 011092 213 --KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (494)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ....+........
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIE 288 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHCTTSCCC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---HHHHHhCccccCC
Confidence 24568999999999864 3588899999999999999999999865321110 0111111112222
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHHH
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 312 (494)
.+...+..+.+||.+||+.||.+|||+.++++.
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 334445789999999999999999999999873
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=340.58 Aligned_cols=249 Identities=20% Similarity=0.221 Sum_probs=197.6
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..+++++.||+|+||+||+|... +|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 45778888899999999999964 58999999987654322 4568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|+++++|.+++. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 83 YCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp CCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 999999998876 3466999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------------------cc
Q 011092 213 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------ML 271 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~--------------------~~ 271 (494)
....+|+.|+|||++.+ ..++.++||||||+++|+|++|..||.............. ..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 24467899999999876 5679999999999999999999998866432211100000 00
Q ss_pred ccccccCC-----CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 TDSCLEGQ-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+..... .....+..+.+|+.+||+.||.+|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000 01235678999999999999999999999997
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=347.19 Aligned_cols=248 Identities=20% Similarity=0.179 Sum_probs=196.2
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC-----CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM-----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.+++++.||+|+||+||+|.. .++..||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 106 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence 456677779999999999995 45889999998643 223467899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHh
Q 011092 135 AEYMPNETLAKHLFHWE--------------------------------------THPMKWAMRLRVVLHLAQALEYCTS 176 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~i~~~l~~lH~ 176 (494)
|||++||+|.+++.... ...+++..+..|+.||+.||.|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985210 1123577888999999999999999
Q ss_pred cCCcccccccccceeecCCC--CeEEcccCCcccCCC--------CCccccCCCcCCCcCCCC--CCCCCCCCchhHHHH
Q 011092 177 KGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRD--------GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTL 244 (494)
Q Consensus 177 ~~~ivH~Dlkp~Nill~~~~--~~kl~Dfgla~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~v 244 (494)
++ |+||||||+|||++.++ .+||+|||+++.... .....||+.|+|||++.+ ..++.++||||||++
T Consensus 187 ~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 187 QG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp TT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred CC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 99 99999999999998766 899999999875422 234568999999999875 568999999999999
Q ss_pred HHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 245 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+|+|++|+.||................. ..........+..+.+|+.+||+.||.+|||+.++++
T Consensus 266 l~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 266 LHLLLMGAVPFPGVNDADTISQVLNKKL--CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCC--CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHCCCCCCCCChHHHHHHHHhccc--ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999876543322221111110 0011111235678999999999999999999999987
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=352.49 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=188.9
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccC-CCCCccEEEEEecCC--ccce
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGD--ERLL 133 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~--~~~l 133 (494)
..|++++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.++..+. ||||+++++++...+ ..|+
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 3567888889999999999995 46899999999654222 2456889999999996 999999999997544 6899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC--
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 211 (494)
||||++ ++|.+++.. ..+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999997 789998853 57999999999999999999999999 99999999999999999999999999975432
Q ss_pred -----------------------CCccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc
Q 011092 212 -----------------------GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 267 (494)
Q Consensus 212 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~ 267 (494)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123468999999999976 56899999999999999999999998765332211111
Q ss_pred ccccccc-----------------------------cccC------------CCCchhHHHHHHHHHHHccCCCCCCCCh
Q 011092 268 LQMLTDS-----------------------------CLEG------------QFTDDDGTELVRLASRCLQYEPRERPNP 306 (494)
Q Consensus 268 ~~~~~~~-----------------------------~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~ 306 (494)
...+..+ .... ..+...++++.+|+.+||+.||.+|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 1000000 0000 0011345789999999999999999999
Q ss_pred HHHHH
Q 011092 307 KSLVT 311 (494)
Q Consensus 307 ~~vl~ 311 (494)
.++++
T Consensus 324 ~e~l~ 328 (388)
T 3oz6_A 324 NDALK 328 (388)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 99987
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=344.61 Aligned_cols=251 Identities=18% Similarity=0.293 Sum_probs=199.9
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.+..+++++.||+|+||.||+|... +|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3557888999999999999999964 58999999997654332 35578999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+++++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999999988765 3457999999999999999999999999 999999999999999999999999998764432
Q ss_pred --CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------------c
Q 011092 213 --KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------Q 269 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--------------------~ 269 (494)
....+|+.|+|||++.+. .++.++||||||+++|+|++|+.||............. .
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 345689999999999875 68999999999999999999999887643221110000 0
Q ss_pred ccccccccC-----CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 MLTDSCLEG-----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
....+.... .....++..+.+|+.+||+.||.+|||+.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000 011235678999999999999999999999986
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=342.54 Aligned_cols=247 Identities=15% Similarity=0.143 Sum_probs=201.7
Q ss_pred cccc-ccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--CChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeee
Q 011092 62 ENIV-SEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 62 ~~~i-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+.++ +.||+|+||.||+|... +++.||||++..... .....+.+|+.++..+ +||||+++++++...+..++|||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e 109 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence 3444 56799999999999954 589999999975432 2357899999999999 56999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccCCcccCCCC-
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~- 212 (494)
|+++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 999999999986544577999999999999999999999999 999999999999987 789999999999865543
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||................ ...........+..+.+
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~ 266 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN--VDYSEETFSSVSQLATD 266 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTTTTTSCHHHHH
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc--cccCchhhcccCHHHHH
Confidence 34568999999999998899999999999999999999999987654332221111111 11112223456688999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||+.||.+|||+.++++
T Consensus 267 li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 267 FIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHcCCChhhCcCHHHHhC
Confidence 999999999999999999986
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=346.16 Aligned_cols=257 Identities=19% Similarity=0.304 Sum_probs=207.6
Q ss_pred ccccccccCCCCCCCeEEEEEE-----cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCC--ccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~ 132 (494)
..+++++.||+|+||.||++.. .+++.||||++........+.|.+|+.++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3567888999999999999984 358899999998765444678999999999999999999999987654 689
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 121 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999999999975 3356999999999999999999999999 999999999999999999999999999876443
Q ss_pred C-------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh---c--------cccccccc
Q 011092 213 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NLQMLTDS 274 (494)
Q Consensus 213 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~---~--------~~~~~~~~ 274 (494)
. ...++..|+|||.+.+..++.++||||||+++|+|+||..|+.......... . ........
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 2345678999999988889999999999999999999997765332111100 0 00001111
Q ss_pred cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 275 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
......+..++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11122345567899999999999999999999999999988754
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=346.37 Aligned_cols=246 Identities=18% Similarity=0.253 Sum_probs=194.1
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCC------cc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~ 131 (494)
.|++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 577888889999999999996 569999999996543222 457889999999999999999999998763 35
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+ +++|.+++.. ..+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 9999999 7999999863 56999999999999999999999999 99999999999999999999999999987554
Q ss_pred C-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------------------
Q 011092 212 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------- 269 (494)
Q Consensus 212 ~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-------------------- 269 (494)
. ....+|+.|+|||++.+ ..++.++|||||||+++||++|+.||.+............
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~ 260 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHH
Confidence 3 34678999999999877 6789999999999999999999999876432211110000
Q ss_pred ---cccc--ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ---MLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ---~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.. ...........+..+.+|+.+||+.||.+|||+.++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000 00001122345688999999999999999999999998
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-43 Score=334.73 Aligned_cols=243 Identities=16% Similarity=0.144 Sum_probs=204.9
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+.+.+.||+|+||.||++... +++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 46777888899999999999965 5889999999754322 2456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 211 (494)
||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (294)
T 2rku_A 95 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171 (294)
T ss_dssp ECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence 99999999998864 357999999999999999999999999 99999999999999999999999999876542
Q ss_pred CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 212 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 212 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
.....+|+.|+|||.+.+..++.++||||||+++|+|++|..||............... ....+...+..+.++
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l 245 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAASL 245 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHH
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc------cCCCccccCHHHHHH
Confidence 22356889999999999888999999999999999999999998765433221111110 112344556789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 246 i~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 246 IQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp HHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHcccChhhCcCHHHHhh
Confidence 99999999999999999997
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=348.90 Aligned_cols=255 Identities=19% Similarity=0.273 Sum_probs=206.1
Q ss_pred CccccccccCCCCCCCeEEEEEEcC-C-----CEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLEN-Q-----RRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 130 (494)
...+.+.+.||+|+||.||+|.... + ..||+|.+...... ..+.+.+|+.++.++ +||||+++++++..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3567777888999999999999532 3 47999999765422 246789999999999 89999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCe
Q 011092 131 RLLVAEYMPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 198 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~ 198 (494)
.++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEE
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeE
Confidence 999999999999999987431 346899999999999999999999999 9999999999999999999
Q ss_pred EEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccc
Q 011092 199 RLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 271 (494)
Q Consensus 199 kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 271 (494)
||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.............
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--- 280 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV--- 280 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH---
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH---
Confidence 99999998754322 22345778999999988889999999999999999999 887776532211111110
Q ss_pred ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 272 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
........+...+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 281 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 281 -KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp -HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 0111112233456789999999999999999999999999987643
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=336.19 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=202.5
Q ss_pred ccccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
..+.+.+.||+|+||.||+|...+ +..||||.+..... ...+.|.+|+.+++.++||||+++++++.. +..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 456777888999999999998533 23699999976532 235678999999999999999999999865 457899
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 91 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 91 MELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999999999964 3456999999999999999999999999 999999999999999999999999998865432
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
....+++.|+|||++.+..++.++||||||+++|+|+| |+.||............... .....+...++.+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l 243 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-----DRLPKPDLCPPVL 243 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT-----CCCCCCTTCCHHH
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC-----CCCCCCCCCCHHH
Confidence 23345788999999988889999999999999999998 99888543222111111000 0112233456789
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999987653
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=335.65 Aligned_cols=243 Identities=18% Similarity=0.267 Sum_probs=205.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+.+++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++..++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 366778889999999999995 4689999999976543 34678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
++++|.+++. ..++++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999984 467999999999999999999999999 999999999999999999999999998765432 34
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+|+.|+|||++.+..++.++||||||+++|+|++|..|+.............. ......+...+..+.+++.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-----SCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-----CCCCCCccccCHHHHHHHHH
Confidence 5688999999999988899999999999999999999988865432221111100 11122344556789999999
Q ss_pred HccCCCCCCCChHHHHHH
Q 011092 295 CLQYEPRERPNPKSLVTA 312 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~ 312 (494)
||+.||.+|||+.++++.
T Consensus 254 ~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HCCSSGGGSCCHHHHTTC
T ss_pred HcCCChhhCcCHHHHhhC
Confidence 999999999999999873
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=346.63 Aligned_cols=242 Identities=19% Similarity=0.247 Sum_probs=197.6
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+++++.||+|+||.||+|... +|+.||||++..... .+.+|++++.++ +||||+++++++.+++..|+||||+
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 98 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM 98 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence 5778888899999999999964 589999999976542 345788889888 7999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC----CCeEEcccCCcccCCCC--
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgla~~~~~~-- 212 (494)
+||+|.+++. ..+.+++..+..++.||+.||.|||++| |+||||||+|||+.+. +.+||+|||+++.....
T Consensus 99 ~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 99 KGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp CSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999999987 3467999999999999999999999999 9999999999998533 34999999999865432
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch---hHHhhhccccccccccccCCCCchhHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDDDGTE 287 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||.... ...+........ .......+..++.+
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~ 253 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--FSLSGGYWNSVSDT 253 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC--CCCCSTTTTTSCHH
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC--cccCccccccCCHH
Confidence 34567999999999987778999999999999999999999986421 111111111100 01112233456789
Q ss_pred HHHHHHHHccCCCCCCCChHHHHH
Q 011092 288 LVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 288 l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+|+.+||+.||.+|||+.++++
T Consensus 254 ~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 254 AKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999999986
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=358.39 Aligned_cols=246 Identities=16% Similarity=0.217 Sum_probs=191.5
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCC------c
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~ 130 (494)
..|++++.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+ .
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 4577888889999999999995 4589999999975421 22567889999999999999999999997654 4
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.|+||||++ ++|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~-~~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCS-EEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCC-CCHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 699999997 45766663 34999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc-------------
Q 011092 211 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------- 274 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~------------- 274 (494)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.............+..+
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 34678999999999999999999999999999999999999997653221111100000000
Q ss_pred ------------cccCCCC-----------chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 ------------CLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ------------~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.....++ ...+.++.+|+.+||+.||.+|||+.++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000001 012678999999999999999999999997
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=347.87 Aligned_cols=249 Identities=19% Similarity=0.225 Sum_probs=202.3
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..+++++.||+|+||+||++... ++..||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46788889999999999999964 6899999999765322 246789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCC--CCCc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKS 214 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~ 214 (494)
++|++|.+++.. ...+++..+..|+.|++.||.|||++ + |+||||||+|||++.++.+||+|||++.... ....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 999999999974 34699999999999999999999996 8 9999999999999999999999999986432 2334
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------------------
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------------- 268 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~-------------------------- 268 (494)
..||+.|+|||++.+..++.++||||||+++|+|++|+.||.............
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 578999999999998889999999999999999999999986543222111000
Q ss_pred ------------cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 ------------QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 ------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.............+.++.+|+.+||+.||.+|||+.++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000111112235678999999999999999999999996
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=345.16 Aligned_cols=248 Identities=19% Similarity=0.189 Sum_probs=199.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-----CCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----NNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----hpnIv~l~~~~~~~~~~~lv 134 (494)
.+.+++.||+|+||+||+|.. .+++.||||+++... .....+..|+.+++.++ ||||+++++++...+..++|
T Consensus 36 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv 114 (360)
T 3llt_A 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLI 114 (360)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEE
T ss_pred EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEE
Confidence 456777779999999999996 568999999996432 22456788999999996 99999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC--------------------
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------------------- 194 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-------------------- 194 (494)
|||+ +++|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+|||++.
T Consensus 115 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 115 FEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp ECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred EcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 9999 899999998655567999999999999999999999999 999999999999975
Q ss_pred -----CCCeEEcccCCcccCCC-CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc
Q 011092 195 -----DGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 195 -----~~~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~ 268 (494)
++.+||+|||+++.... .....||+.|+|||++.+..++.++|||||||++|+|+||+.||.............
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~ 272 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMME 272 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 78999999999986543 345678999999999999999999999999999999999999986542211110000
Q ss_pred ---cccc-----------------cc----cccCCCC----------------chhHHHHHHHHHHHccCCCCCCCChHH
Q 011092 269 ---QMLT-----------------DS----CLEGQFT----------------DDDGTELVRLASRCLQYEPRERPNPKS 308 (494)
Q Consensus 269 ---~~~~-----------------~~----~~~~~~~----------------~~~~~~l~~li~~cl~~dp~~Rps~~~ 308 (494)
...+ .. ..+.... ...++.+.+|+.+||+.||.+|||+.+
T Consensus 273 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~e 352 (360)
T 3llt_A 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAE 352 (360)
T ss_dssp HHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred HhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHH
Confidence 0000 00 0000000 001267889999999999999999999
Q ss_pred HHH
Q 011092 309 LVT 311 (494)
Q Consensus 309 vl~ 311 (494)
+++
T Consensus 353 lL~ 355 (360)
T 3llt_A 353 LLK 355 (360)
T ss_dssp HTT
T ss_pred Hhc
Confidence 986
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=339.59 Aligned_cols=254 Identities=21% Similarity=0.293 Sum_probs=197.4
Q ss_pred ccccccccCCCCCCCeEEEEEEc----CCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCc---
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE--- 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~--- 130 (494)
..+.+.+.||+|+||.||+|... ++..||||.++...... .+.+.+|+.++++++||||+++++++...+.
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 35667778899999999999843 24589999997654322 4568999999999999999999999987553
Q ss_pred --cceeeecCCCCCHHHHhcc----cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccC
Q 011092 131 --RLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204 (494)
Q Consensus 131 --~~lv~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 204 (494)
.++||||+++++|.+++.. .....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecC
Confidence 4999999999999999842 13457999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccccccccc
Q 011092 205 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 205 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (494)
++...... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||................ .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH-----R 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-----C
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC-----C
Confidence 98765332 23346788999999998889999999999999999999 777775543322221111111 1
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
...+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 123345667899999999999999999999999999987654
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=343.58 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=193.8
Q ss_pred cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
..+..+++++.||+|+||+||+|.. .+++.||||+++...... .+.+.+|+.++++++||||+++++++..++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456788889999999999999995 468999999997543222 4567899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-----CCCCeEEcccCCccc
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-----EDGNPRLSTFGLMKN 208 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-----~~~~~kl~Dfgla~~ 208 (494)
||||++ ++|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999998 699999874 456999999999999999999999999 99999999999994 455699999999876
Q ss_pred CCCC----CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc--ccc-------
Q 011092 209 SRDG----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--TDS------- 274 (494)
Q Consensus 209 ~~~~----~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~--~~~------- 274 (494)
.... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|..||................ ...
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 4422 3446799999999998744 8999999999999999999999987643322111110000 000
Q ss_pred ---cccCC------------CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 ---CLEGQ------------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 ---~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..... .+...+.++.+|+.+||+.||.+|||+.++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 01124578999999999999999999999987
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=337.94 Aligned_cols=247 Identities=18% Similarity=0.221 Sum_probs=199.0
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+++++.||+|+||.||+|... ++..||+|++........+.+.+|+.++..++||||+++++++...+..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 35678888899999999999965 58999999998766666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccC----CCCCc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 214 (494)
++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++... .....
T Consensus 99 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 99 PGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp TTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 99999998864 2456999999999999999999999999 999999999999999999999999987532 12334
Q ss_pred cccCCCcCCCcCC-----CCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 215 YSTNLAFTPPEYL-----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 215 ~~~t~~y~aPE~~-----~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
..+|+.|+|||++ .+..++.++||||||+++|+|++|..|+................ ......+...+..+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 253 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD---PPTLLTPSKWSVEFR 253 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC---CCCCSSGGGSCHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC---CcccCCccccCHHHH
Confidence 5789999999988 45678999999999999999999998886543222111111110 011122345567899
Q ss_pred HHHHHHccCCCCCCCChHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+++.+||+.||.+|||+.++++
T Consensus 254 ~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 254 DFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHHHcccChhhCCCHHHHhc
Confidence 9999999999999999999976
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-43 Score=331.37 Aligned_cols=245 Identities=19% Similarity=0.179 Sum_probs=200.9
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.+++++.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence 5677788899999999999964 689999999975432 23567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC------C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 212 (494)
++++|.+++. ....+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++..... .
T Consensus 88 ~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 88 SGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp TTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 9999999986 3457999999999999999999999999 99999999999999999999999999875432 2
Q ss_pred CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||.............. ............+..+.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l 241 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---EKKTYLNPWKKIDSAPLAL 241 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH---TTCTTSTTGGGSCHHHHHH
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh---hcccccCchhhcCHHHHHH
Confidence 34568899999999987665 7789999999999999999998865322110000000 0000011123456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 242 i~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 242 LHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHCCCCchhCCCHHHHhc
Confidence 99999999999999999987
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=339.91 Aligned_cols=256 Identities=19% Similarity=0.234 Sum_probs=200.1
Q ss_pred CCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC------
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------ 128 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------ 128 (494)
.++.|++++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 346788899999999999999996 56899999998654322 256788999999999999999999999873
Q ss_pred --CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 129 --DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 129 --~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
+..++||||++ ++|.+.+.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 45799999997 577777754 3356999999999999999999999999 999999999999999999999999998
Q ss_pred ccCCC--------CCccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc---ccccc
Q 011092 207 KNSRD--------GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---MLTDS 274 (494)
Q Consensus 207 ~~~~~--------~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~---~~~~~ 274 (494)
+.... .....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. .....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 76432 123467899999999876 4579999999999999999999998876433221111000 00000
Q ss_pred ccc---------------CCCC---c-----hhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 275 CLE---------------GQFT---D-----DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 275 ~~~---------------~~~~---~-----~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
... .... . ..++.+.+|+.+||+.||.+|||+.++++ ..+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~ 316 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFW 316 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGG
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC--CCCcC
Confidence 000 0000 0 01456889999999999999999999998 45544
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=341.60 Aligned_cols=250 Identities=20% Similarity=0.235 Sum_probs=194.9
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC-----hHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
...+++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++..++||||+++++++...+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 34566777789999999999995 468999999997533211 346889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFME-TDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCS-EEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCC-CCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999998 589888864 3356899999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------ccccc----
Q 011092 213 ----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------LTDSC---- 275 (494)
Q Consensus 213 ----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~---- 275 (494)
....+|+.|+|||++.+. .++.++|||||||++|+|++|.+||............... ....+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 345689999999998764 4788999999999999999999887664322211111100 00000
Q ss_pred --ccCC--------CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 276 --LEGQ--------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 276 --~~~~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.... .....+..+.+||.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 01334578999999999999999999999998
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=357.58 Aligned_cols=245 Identities=20% Similarity=0.206 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC--CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.|++++.||+|+||+||+|... +++.||||++... .......+.+|+.++++++||||+++++++...+..++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 5778888899999999999964 6899999998642 223467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec---CCCCeEEcccCCcccCCCC--
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 212 (494)
++|++|.+.+.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 999999998864 356999999999999999999999999 99999999999995 5567999999999765433
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.......+.......... ........++..+.+|
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA--FDLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCcccCCCCHHHHHH
Confidence 34568999999999975 5899999999999999999999998765443322221111100 0001123456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
|.+||+.||.+|||+.++++
T Consensus 257 i~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999997
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-43 Score=335.14 Aligned_cols=246 Identities=17% Similarity=0.231 Sum_probs=199.0
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+.....||+|+||.||+|.. .++..||||.+........+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 33344569999999999995 56889999999876655577899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEEcccCCcccCCC----CCc
Q 011092 141 ETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD----GKS 214 (494)
Q Consensus 141 gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~----~~~ 214 (494)
++|.+++.... ...+++..+..++.||+.||.|||+++ ++|+||||+||+++. ++.+||+|||++..... ...
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999997532 235678999999999999999999999 999999999999987 89999999999876543 234
Q ss_pred cccCCCcCCCcCCCCCC--CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
..+|+.|+|||++.+.. ++.++||||||+++|+|++|+.||............ ..........+...+.++.+++
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li 259 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKAFI 259 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHHCCCCCCCTTSCHHHHHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccccccccccccCCHHHHHHH
Confidence 56899999999987654 788999999999999999999888542211110000 0000112234455678999999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.||.+|||+.+++.
T Consensus 260 ~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 260 LKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHTTCSSTTTSCCHHHHHT
T ss_pred HHHccCChhhCCCHHHHhc
Confidence 9999999999999999986
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=334.14 Aligned_cols=244 Identities=19% Similarity=0.189 Sum_probs=198.9
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC----CCChHHHHHHHHHHhccCCCCCccEEEEEe--cCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~~~~~ 132 (494)
..|.+++.||+|+||.||++.. .++..||||+++... ......+.+|+.++++++||||+++++++. ..+..+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 4577788889999999999995 468999999996432 223567999999999999999999999984 455789
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||++++ |.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999865 777776555678999999999999999999999999 999999999999999999999999998765421
Q ss_pred ------CccccCCCcCCCcCCCCCC--CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 213 ------KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
....+|+.|+|||++.+.. .+.++||||||+++|+|++|..||............... ....+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~~ 236 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGDC 236 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSSS
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCcc
Confidence 2346889999999987644 377999999999999999999998765433322211111 11234456
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+..+.+++.+||+.||.+|||+.++++
T Consensus 237 ~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 688999999999999999999999997
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=334.13 Aligned_cols=246 Identities=16% Similarity=0.196 Sum_probs=201.7
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.+++++.||+|+||.||++... +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 4667788899999999999965 5899999999754322 35779999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC----CeEEcccCCcccC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 209 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 209 (494)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999964 356999999999999999999999999 99999999999998877 8999999999865
Q ss_pred CCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 210 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 210 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
... ....+++.|+|||++.+..++.++||||||+++|+|++|..||.................. .....+...+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD--FDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC--CcchhcccCCH
Confidence 433 2346889999999999888999999999999999999999998765433222111111000 00011123457
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHh
Confidence 8999999999999999999999997
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=369.46 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=208.4
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
...++++++.||+|+||.||+|... +++.||||+++.. .....+.+..|..++..+ +||||+.+++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3567888899999999999999954 5889999999742 223456788999999998 7999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 211 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 211 (494)
|||||++||+|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999974 356999999999999999999999999 99999999999999999999999999985322
Q ss_pred ---CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 212 ---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 212 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...+|..++.++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHH
Confidence 23567899999999999999999999999999999999999999876544433332221 123455677899
Q ss_pred HHHHHHHccCCCCCCCCh-----HHHHH
Q 011092 289 VRLASRCLQYEPRERPNP-----KSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~-----~~vl~ 311 (494)
.+||.+||+.||.+||++ ++|++
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 999999999999999997 66664
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=341.27 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=204.6
Q ss_pred ccccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
..+.+++.||+|+||.||+|.. .++..||||.+..... .....+.+|+.++++++||||+++++++...+..+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 3567788889999999999983 2477899999975432 22457899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccC
Q 011092 133 LVAEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFG 204 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg 204 (494)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|||++. +..+||+|||
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999999975322 45899999999999999999999999 999999999999984 4569999999
Q ss_pred CcccCC------CCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhcccccccccccc
Q 011092 205 LMKNSR------DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 205 la~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (494)
++.... ......+|+.|+|||++.+..++.++||||||+++|+|+| |..||............... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~~ 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GR 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC-----CC
Confidence 886432 1234456889999999988889999999999999999998 88887654333222211111 01
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
...+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 264 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1223455678999999999999999999999999998876543
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-43 Score=345.24 Aligned_cols=246 Identities=12% Similarity=0.131 Sum_probs=202.9
Q ss_pred ccccccccCCCCCCCeEEEEE------EcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC---CCCCccEEEEEecCCc
Q 011092 60 AVENIVSEHGEKAPNVVYKGK------LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDE 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~ 130 (494)
..+.+++.||+|+||+||+|. ..+++.||||++... ....+..|+.++..++ |+||+.+++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 456777788999999999993 456899999999754 3677888998888886 9999999999999999
Q ss_pred cceeeecCCCCCHHHHhccc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-----------CC
Q 011092 131 RLLVAEYMPNETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----------DG 196 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-----------~~ 196 (494)
.++||||++||+|.+++... ....+++..++.|+.||+.||.|||+++ |+||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 2457999999999999999999999999 999999999999998 89
Q ss_pred CeEEcccCCcccCC---C---CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc
Q 011092 197 NPRLSTFGLMKNSR---D---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 270 (494)
Q Consensus 197 ~~kl~Dfgla~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~ 270 (494)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||......... .
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~-- 295 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK---P-- 295 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---E--
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee---e--
Confidence 99999999996432 1 13456899999999999988999999999999999999999887543211100 0
Q ss_pred cccccccCCCCchhHHHHHHHHHHHccCCCCCC-CChHHHHHHhcccccc
Q 011092 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER-PNPKSLVTALSPLQKE 319 (494)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~vl~~L~~~~~~ 319 (494)
.... ... ..++.+.+++..||+.+|.+| |++.++.+.|+.+...
T Consensus 296 --~~~~-~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 296 --EGLF-RRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --CSCC-TTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --chhc-ccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0001 111 235789999999999999999 6888888888877543
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=356.92 Aligned_cols=245 Identities=16% Similarity=0.194 Sum_probs=198.8
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.|++++.||+|+||+||+|... ++..||||++.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 5778888999999999999964 68999999997643 23367799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccCCcccCCCC--
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~-- 212 (494)
++||+|.+.+.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++......
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998864 356999999999999999999999999 999999999999975 455999999998765433
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|+|||++. ..++.++|||||||++|+|++|..||.......+.......... ........++..+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT--FDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCchhcccCCHHHHHH
Confidence 3456899999999986 56899999999999999999999998765443332221111110 0001112456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 272 i~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHCCCChhhCccHHHHhc
Confidence 99999999999999999986
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=348.44 Aligned_cols=246 Identities=20% Similarity=0.257 Sum_probs=201.6
Q ss_pred CccccccccCCCCCCCeEEEEEE----cCCCEEEEEEecCCC----CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 129 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 129 (494)
...+++++.||+|+||.||++.. .+++.||||+++... ....+.+.+|+.++..+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 34677888889999999999996 368999999996532 12356678899999999 7999999999999999
Q ss_pred ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999974 356999999999999999999999999 999999999999999999999999998764
Q ss_pred CCC-----CccccCCCcCCCcCCCCC--CCCCCCCchhHHHHHHHHHhCCCCCCCchh----HHhhhccccccccccccC
Q 011092 210 RDG-----KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 210 ~~~-----~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 278 (494)
... ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||..... ..+...... ...
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~------~~~ 283 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK------SEP 283 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH------CCC
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc------cCC
Confidence 322 235689999999999863 478899999999999999999998864321 111111110 112
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCC-----ChHHHHHHh
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERP-----NPKSLVTAL 313 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~vl~~L 313 (494)
..+...+..+.+||.+||+.||.+|| |+.++++..
T Consensus 284 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 23455668899999999999999999 899998743
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=358.54 Aligned_cols=245 Identities=18% Similarity=0.167 Sum_probs=204.4
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC---CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.|++++.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 5777888899999999999964 68999999996543 2346789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee---cCCCCeEEcccCCcccCCCCC
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~ 213 (494)
|+.|++|.+++. ....+++..+..|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++.......
T Consensus 107 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999999887 3467999999999999999999999999 9999999999999 567899999999988665433
Q ss_pred ---ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 214 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 214 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||.......+.......... ........++..+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAKD 260 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGGGSCHHHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCcccccCCHHHHH
Confidence 3468999999999875 6899999999999999999999998765433322211111100 000112345688999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
||.+||+.||.+|||+.++++
T Consensus 261 li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHCCCChhHCcCHHHHhh
Confidence 999999999999999999996
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=333.83 Aligned_cols=253 Identities=17% Similarity=0.212 Sum_probs=204.6
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEec--CCccc
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERL 132 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~ 132 (494)
....+++++.||+|+||.||++... +|+.||+|.+...... ..+.+.+|+.++++++||||+++++++.. ++..+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 3456788888999999999999964 6899999999765432 24568999999999999999999998854 56789
Q ss_pred eeeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCC----cccccccccceeecCCCCeEEcccCCc
Q 011092 133 LVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~----ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
+||||+++++|.+++... ....+++..++.++.||+.||.|||+.+. ++||||||+|||++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999999742 23459999999999999999999999763 999999999999999999999999998
Q ss_pred ccCCCCC----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc
Q 011092 207 KNSRDGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282 (494)
Q Consensus 207 ~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (494)
....... ...+++.|+|||.+.+..++.++||||||+++|+|++|..||.......+........ ....+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~ 238 (279)
T 2w5a_A 164 RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-----FRRIPY 238 (279)
T ss_dssp HHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----CCCCCT
T ss_pred eeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc-----cccCCc
Confidence 7655432 3467899999999998889999999999999999999999887654332222111111 112344
Q ss_pred hhHHHHHHHHHHHccCCCCCCCChHHHHHHhcc
Q 011092 283 DDGTELVRLASRCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
..+.++.+++.+||+.||.+|||+.++++.+..
T Consensus 239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 566889999999999999999999999986643
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=337.32 Aligned_cols=252 Identities=19% Similarity=0.299 Sum_probs=185.8
Q ss_pred CccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
...+++++.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 4567788888999999999999 4568999999986543 2235678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 137 YMPNETLAKHLFHW------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 137 ~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
|+++++|.+++... ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++....
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 99999999998631 2456999999999999999999999999 9999999999999999999999999887543
Q ss_pred CC---------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh----hccccccccccc
Q 011092 211 DG---------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----DRNLQMLTDSCL 276 (494)
Q Consensus 211 ~~---------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~----~~~~~~~~~~~~ 276 (494)
.. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||......... ............
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 252 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC---
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccc
Confidence 22 23468899999999875 45899999999999999999999988653222111 111111111111
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
........+..+.+++.+||+.||.+|||+.++++
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 12233455678999999999999999999999987
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=333.78 Aligned_cols=245 Identities=16% Similarity=0.211 Sum_probs=200.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
..+++++.||+|+||.||+|... +|+.||||.+.... ..+.+.+|+.++..++||||+++++++...+..++||||+
T Consensus 29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 45778888899999999999964 58999999997643 4578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Cc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 214 (494)
++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 107 ~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 107 GAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp TTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 99999999863 2467999999999999999999999999 999999999999999999999999998765432 34
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..+|+.|+|||.+.+..++.++||||||+++|+|++|..||.............. ........+...+..+.+++.+
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~ 261 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT---NPPPTFRKPELWSDNFTDFVKQ 261 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCCCCCSSGGGSCHHHHHHHHH
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc---CCCcccCCcccCCHHHHHHHHH
Confidence 5678999999999988899999999999999999999998865322111110000 0001111233456789999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.||.+|||+.++++
T Consensus 262 ~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 262 CLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HTCSCTTTSCCHHHHTT
T ss_pred HccCChhhCcCHHHHHh
Confidence 99999999999999986
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=342.49 Aligned_cols=255 Identities=19% Similarity=0.246 Sum_probs=195.9
Q ss_pred CCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHH--hccCCCCCccEEEEEec-----CCc
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSV--GQLRNNRLTNLLGCCCE-----GDE 130 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l--~~l~hpnIv~l~~~~~~-----~~~ 130 (494)
++..+++++.||+|+||.||+|+. +++.||||++.... ...+..|.+++ ..++||||+++++.+.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 456788889999999999999987 67899999997532 44555555554 45899999999986543 235
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCcccccccccceeecCCCCeEEc
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---------GRALYHDLNAYRILFDEDGNPRLS 201 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------~~ivH~Dlkp~Nill~~~~~~kl~ 201 (494)
.++||||+++|+|.+++.. ...++..+..|+.||+.||.|||+. + |+||||||+|||++.++.+||+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEe
Confidence 6899999999999999953 4568999999999999999999999 8 9999999999999999999999
Q ss_pred ccCCcccCCCC------------CccccCCCcCCCcCCCC-------CCCCCCCCchhHHHHHHHHHhCCCCCCCchh-H
Q 011092 202 TFGLMKNSRDG------------KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-D 261 (494)
Q Consensus 202 Dfgla~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~vl~elltg~~p~~~~~~-~ 261 (494)
|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||..|+..... .
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 99999764321 13468999999999986 3466789999999999999999766532110 0
Q ss_pred H-----------------hhhccccccccccccCC--CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 262 L-----------------IRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 262 ~-----------------~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
. +..........+..... .....+..+.+||.+||+.||.+|||+.++++.|+.+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 0 00000000001111111 12346778999999999999999999999999998876543
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=340.28 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=205.5
Q ss_pred CccccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCC-
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD- 129 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~- 129 (494)
...+++++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 34677888889999999999984 24679999999765422 245789999999999 7999999999988754
Q ss_pred ccceeeecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||+++.+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 184 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCC
Confidence 48999999999999999975322 12889999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~ 268 (494)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..||.............
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 999999999997654322 2346788999999988889999999999999999998 888876533211110000
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.. ......+...+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 265 ~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 265 KE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cc----CccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00 01112334456789999999999999999999999999988754
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=352.68 Aligned_cols=259 Identities=14% Similarity=0.158 Sum_probs=207.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCC--ccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~ 135 (494)
..|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 35778888899999999999965 48999999997533 234677889999999999999999999998765 679999
Q ss_pred ecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee----cCCCCeEEcccCCcccCC
Q 011092 136 EYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~ 210 (494)
||++||+|.+++.... ...+++..++.|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999997532 234999999999999999999999999 9999999999999 777889999999998755
Q ss_pred CC---CccccCCCcCCCcCCCC--------CCCCCCCCchhHHHHHHHHHhCCCCCCCch-----hHHhh---hcccccc
Q 011092 211 DG---KSYSTNLAFTPPEYLRT--------GRVTPESVIYSFGTLLLDLLSGKHIPPSHA-----LDLIR---DRNLQML 271 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~--------~~~~~~sDv~slG~vl~elltg~~p~~~~~-----~~~~~---~~~~~~~ 271 (494)
.. ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.... ...+. .......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 24568999999998864 457889999999999999999998874311 11110 1000000
Q ss_pred ---------------ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 272 ---------------TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 272 ---------------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.........+..++..+.+++.+||+.||.+|||+.++++.++.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 000111234466788999999999999999999999999999877554
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-43 Score=351.88 Aligned_cols=241 Identities=15% Similarity=0.189 Sum_probs=188.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC--------CCChHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--------WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
.+.+++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.. +..
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~ 214 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDY 214 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEE
T ss_pred cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cce
Confidence 466777789999999999995 458999999996432 1113358899999999999999999999864 457
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC---CCeEEcccCCccc
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKN 208 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgla~~ 208 (494)
++||||+++|+|.+++. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.
T Consensus 215 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 215 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp EEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred EEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 99999999999999886 3567999999999999999999999999 9999999999999754 4599999999987
Q ss_pred CCCC---CccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-----Hhhhcccccccccccc
Q 011092 209 SRDG---KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNLQMLTDSCLE 277 (494)
Q Consensus 209 ~~~~---~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 277 (494)
.... ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||...... .+.........
T Consensus 292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~----- 366 (419)
T 3i6u_A 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP----- 366 (419)
T ss_dssp CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCH-----
T ss_pred cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCc-----
Confidence 6543 34578999999999863 56788999999999999999999998643211 11111111000
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
......+..+.+|+.+||+.||.+|||+.++++
T Consensus 367 -~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 367 -EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -hhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 011234578999999999999999999999997
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=328.91 Aligned_cols=243 Identities=19% Similarity=0.255 Sum_probs=197.8
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+.+.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46777888899999999999965 6899999999643 2234567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 167 (276)
T 2h6d_A 91 EYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167 (276)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcce
Confidence 99999999999974 356899999999999999999999999 999999999999999999999999998865443
Q ss_pred CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....+++.|+|||.+.+..+ +.++||||||+++|+|++|..||................ ...+...+..+.++
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~l 241 (276)
T 2h6d_A 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV------FYIPEYLNRSVATL 241 (276)
T ss_dssp ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHHHHH
T ss_pred ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc------ccCchhcCHHHHHH
Confidence 24467899999999987665 679999999999999999999987654333222111110 11234456789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 242 i~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHh
Confidence 99999999999999999997
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=336.36 Aligned_cols=252 Identities=15% Similarity=0.169 Sum_probs=203.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEE-ecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-~~~~~~~lv~e~~ 138 (494)
.+++++.||+|+||.||+|.. .+|+.||||++.... ....+.+|+.++..++|++++..+.++ ..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 566777889999999999995 568999999987654 245789999999999988866665555 5567789999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee---cCCCCeEEcccCCcccCCCC---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--- 212 (494)
+++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 88 -~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 88 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred -CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 8999999964 3457999999999999999999999999 9999999999999 48899999999998764432
Q ss_pred --------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-------HHhhhcccccccccccc
Q 011092 213 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 213 --------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 277 (494)
....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ..+....... ...
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~--- 240 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIE--- 240 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CHH---
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-chH---
Confidence 345689999999999998899999999999999999999999864211 1111111100 000
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCCC
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 322 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~~ 322 (494)
..+..++..+.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 241 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 241 -VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp -HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 11234457899999999999999999999999999988766443
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=335.82 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=201.0
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
+..+++.+.||+|+||.||+|...+ .||+|+++.... ...+.|.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 5677888999999999999999754 499999975432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 211 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 211 (494)
|++|++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++ ++.+||+|||++.....
T Consensus 110 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 110 LCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp CCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999999999964 2346999999999999999999999999 99999999999998 68999999999765421
Q ss_pred ----CCccccCCCcCCCcCCCC---------CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccC
Q 011092 212 ----GKSYSTNLAFTPPEYLRT---------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 212 ----~~~~~~t~~y~aPE~~~~---------~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
.....|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||.................. .
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~ 262 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP----N 262 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC----C
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC----C
Confidence 123357899999999864 34788999999999999999999998765443332221111111 1
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
..+...+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 263 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 263 LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 112234567999999999999999999999999999987654
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=357.62 Aligned_cols=246 Identities=15% Similarity=0.161 Sum_probs=200.4
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-------------CChHHHHHHHHHHhccCCCCCccEEEEE
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-------------PDPRQFLEEARSVGQLRNNRLTNLLGCC 125 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 125 (494)
..|.+++.||+|+||+||+|... ++..||||++..... ...+.+.+|+.++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 35778888899999999999954 588999999975432 2356789999999999999999999999
Q ss_pred ecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC---CeEEcc
Q 011092 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLST 202 (494)
Q Consensus 126 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~D 202 (494)
..++..++||||++||+|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998864 356999999999999999999999999 99999999999998775 699999
Q ss_pred cCCcccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCC
Q 011092 203 FGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 279 (494)
Q Consensus 203 fgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (494)
||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||.......+............. .
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--~ 269 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF--N 269 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH--H
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--c
Confidence 9999866543 3457899999999987 56899999999999999999999999765443332222111100000 0
Q ss_pred CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 280 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 280 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
....++.++.+|+.+||+.||.+|||+.++++
T Consensus 270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 01234578999999999999999999999986
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=340.69 Aligned_cols=246 Identities=19% Similarity=0.193 Sum_probs=200.1
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC--------hHHHHHHHHHHhcc-CCCCCccEEEEEecCCc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 130 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 130 (494)
.+++...||.|+||.||+|... +|+.||||++....... .+.+.+|+.++.++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 4666677799999999999965 69999999997654221 34678999999999 89999999999999999
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.| ++|+||||+|||++.++.+||+|||++....
T Consensus 175 ~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999999974 356999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC---CccccCCCcCCCcCCCC------CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC
Q 011092 211 DG---KSYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 281 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (494)
.. ....||+.|+|||++.+ ..++.++||||||+++|+|++|..||..................... ...
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~ 329 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS--PEW 329 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH--HHH
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--ccc
Confidence 33 34578999999998853 35888999999999999999999998654332221111110000000 001
Q ss_pred chhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 282 DDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 282 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+..+.+++.+||+.||.+|||+.++++
T Consensus 330 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 134567999999999999999999999987
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=355.18 Aligned_cols=239 Identities=15% Similarity=0.124 Sum_probs=188.6
Q ss_pred ccccccccCCCCCCCeEEEEE-EcCCCEEEEEEecCCC---CCChHHHHHHH---HHHhccCCCCCccEE-------EEE
Q 011092 60 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEA---RSVGQLRNNRLTNLL-------GCC 125 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~---~~l~~l~hpnIv~l~-------~~~ 125 (494)
..+.+.+.||+|+||.||+|. ..+|+.||||++.... ....+.|.+|+ .++++++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 456778889999999999999 4669999999997432 22357789999 555566899999998 666
Q ss_pred ecCC-----------------ccceeeecCCCCCHHHHhcccCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 011092 126 CEGD-----------------ERLLVAEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183 (494)
Q Consensus 126 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~ 183 (494)
...+ ..++||||+ +|+|.+++..... ..+++..++.|+.||+.||.|||+++ |+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecC
Confidence 5543 278999999 5899999974211 12345888899999999999999999 9999
Q ss_pred cccccceeecCCCCeEEcccCCcccCCCC-CccccCCCcCCCcCCCCC-----------CCCCCCCchhHHHHHHHHHhC
Q 011092 184 DLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSG 251 (494)
Q Consensus 184 Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~sDv~slG~vl~elltg 251 (494)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865443 23456 999999999877 799999999999999999999
Q ss_pred CCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 252 KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 252 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+.||......... ..+.. ....++..+.+|+.+||+.||.+|||+.++++
T Consensus 310 ~~Pf~~~~~~~~~----~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 310 DLPITKDAALGGS----EWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SCCC------CCS----GGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCcccccccch----hhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9988654321111 11111 11344578999999999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=332.83 Aligned_cols=251 Identities=15% Similarity=0.161 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEE-ecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-~~~~~~~lv~e~~ 138 (494)
.+.+++.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..++|++++..++.+ ..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 456677779999999999995 5689999998765432 34688999999999888877666655 5667789999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee---cCCCCeEEcccCCcccCCCC---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--- 212 (494)
+++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 88 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp -CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred -CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 8999999864 3457999999999999999999999999 9999999999999 78999999999999865432
Q ss_pred --------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-------Hhhhcccccccccccc
Q 011092 213 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------LIRDRNLQMLTDSCLE 277 (494)
Q Consensus 213 --------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~~ 277 (494)
....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .+....... . .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~----~ 239 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-P----I 239 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-C----H
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-h----h
Confidence 2456899999999999889999999999999999999999998653211 011100000 0 0
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccCC
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~~ 321 (494)
......++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00112345789999999999999999999999999998876544
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-43 Score=368.46 Aligned_cols=242 Identities=21% Similarity=0.263 Sum_probs=200.3
Q ss_pred cCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||.||+|.+. +++.||||+++..... ..+.|.+|+.++.+++|||||++++++.. +..++||||+++|
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g 454 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG 454 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCC
Confidence 5899999999999742 4678999999764322 25789999999999999999999999964 5688999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-------c
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------S 214 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~ 214 (494)
+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 455 ~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 455 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 9999996 3467999999999999999999999999 9999999999999999999999999998654322 2
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......+....... .....+..++.++.+||.
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li~ 606 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCPREMYDLMN 606 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 245678999999998899999999999999999998 99888765443322221111 112334566789999999
Q ss_pred HHccCCCCCCCChHHHHHHhcccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
+||+.||.+|||+.+|++.|+.+.
T Consensus 607 ~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 607 LCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHHHH
Confidence 999999999999999999998764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=339.77 Aligned_cols=251 Identities=18% Similarity=0.205 Sum_probs=188.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEe--------cCCc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCC--------EGDE 130 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~--------~~~~ 130 (494)
.+++++.||+|+||.||+|.. .+++.||||++........+.+.+|+.++.++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 567788889999999999995 468999999986654444567899999999995 999999999994 2344
Q ss_pred cceeeecCCCCCHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccccccccceeecCCCCeEEcccCCccc
Q 011092 131 RLLVAEYMPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
.++||||+. |+|.+++... ...++++..++.|+.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 789999996 7999988642 3457999999999999999999999985 399999999999999999999999999986
Q ss_pred CCCCC----------------ccccCCCcCCCcCC---CCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc
Q 011092 209 SRDGK----------------SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269 (494)
Q Consensus 209 ~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~ 269 (494)
..... ...+|+.|+|||++ .+..++.++||||||+++|+|+||+.||.......+......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 267 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYS 267 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------CC
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCccc
Confidence 54321 33578999999998 556688999999999999999999998865432222111111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
...+...+..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 268 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 268 --------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 1112233456899999999999999999999999999886643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=349.93 Aligned_cols=190 Identities=20% Similarity=0.247 Sum_probs=162.9
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC-----Cccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~~~~ 132 (494)
.|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++... +..|
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 577888889999999999995 45889999999754322 246789999999999999999999999876 5689
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 107 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp EEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred EEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 9999996 79999996 3467999999999999999999999999 999999999999999999999999999865322
Q ss_pred --------------------------CccccCCCcCCCcCC-CCCCCCCCCCchhHHHHHHHHHhCCCC
Q 011092 213 --------------------------KSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHI 254 (494)
Q Consensus 213 --------------------------~~~~~t~~y~aPE~~-~~~~~~~~sDv~slG~vl~elltg~~p 254 (494)
....||+.|+|||++ ....++.++|||||||++|||++|..|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 345789999999986 455699999999999999999985433
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-42 Score=327.27 Aligned_cols=244 Identities=19% Similarity=0.251 Sum_probs=197.2
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEec----CCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~l 133 (494)
.+.+...||+|+||.||+|.. .++..||+|.+...... ..+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 356677789999999999995 45889999999754322 24678999999999999999999999875 345899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-Ccccccccccceeec-CCCCeEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 211 (494)
||||+++++|.+++.. ...+++..+..|+.||+.||.|||+.+ +++||||||+|||++ .++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999974 356999999999999999999999985 499999999999998 889999999999876544
Q ss_pred C--CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-HHhhhccccccccccccCCCCchhHHHH
Q 011092 212 G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 212 ~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
. ....+|+.|+|||.+. +.++.++||||||+++|+|++|+.||..... .............. ..+...++.+
T Consensus 185 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 259 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA----SFDKVAIPEV 259 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG----GGGGCCCHHH
T ss_pred cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc----ccCCCCCHHH
Confidence 3 2456899999999887 4589999999999999999999999865322 11111111111111 1222334689
Q ss_pred HHHHHHHccCCCCCCCChHHHHH
Q 011092 289 VRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+++.+||+.||.+|||+.++++
T Consensus 260 ~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 260 KEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHccCChhhCCCHHHHhh
Confidence 99999999999999999999987
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=341.95 Aligned_cols=246 Identities=15% Similarity=0.198 Sum_probs=190.2
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCC------c
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~ 130 (494)
..+++++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4577788889999999999995 45889999999754322 2456889999999999999999999997765 6
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||++ ++|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 799999997 67888884 35899999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccc-------------
Q 011092 211 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------- 274 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~------------- 274 (494)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.............+..+
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 33 34578999999999998889999999999999999999999987643221111111100000
Q ss_pred --------------------cccCC---CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 275 --------------------CLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 275 --------------------~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..... .+...+..+.+|+.+||+.||.+|||+.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00000 01123678999999999999999999999997
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=343.97 Aligned_cols=247 Identities=18% Similarity=0.245 Sum_probs=181.7
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC------Cc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~ 130 (494)
..|++++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 3577888889999999999994 56899999999754322 246788999999999999999999999754 45
Q ss_pred cceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCC
Q 011092 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 210 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 210 (494)
.++||||+ +++|.+++. ...+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 699999885 357999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc-----------ccc----
Q 011092 211 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTD---- 273 (494)
Q Consensus 211 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~-----------~~~---- 273 (494)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+............. +..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 33 34678999999999876 57899999999999999999999998764322111100000 000
Q ss_pred ----c---ccc---CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 274 ----S---CLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 274 ----~---~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ... .......+..+.+|+.+||+.||.+|||+.++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 000 0001234578999999999999999999999987
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=350.38 Aligned_cols=249 Identities=17% Similarity=0.195 Sum_probs=203.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCC-CCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~lv~e~ 137 (494)
..+.+++.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..++| ++|+.+..++...+..+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 3567888889999999999995 5689999999875442 3468899999999976 6667777777788889999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee---cCCCCeEEcccCCcccCCCCC-
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~- 213 (494)
+ +++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 8999999964 3467999999999999999999999999 9999999999999 688999999999998654321
Q ss_pred ----------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh-------HHhhhccccccccccc
Q 011092 214 ----------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNLQMLTDSCL 276 (494)
Q Consensus 214 ----------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~~ 276 (494)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+..........
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--- 238 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE--- 238 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH---
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH---
Confidence 45689999999999999999999999999999999999999865321 1111111111100
Q ss_pred cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
..+..++.++.+|+..||+.+|.+||++.+|++.|+.+..
T Consensus 239 --~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 --ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp --HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred --HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0112345789999999999999999999999999987744
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-42 Score=334.34 Aligned_cols=243 Identities=16% Similarity=0.216 Sum_probs=197.6
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEec--CCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCE--GDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~--~~~~~lv~ 135 (494)
..+++++.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 4678888999999999999995 56899999999743 3678999999999996 9999999999987 56789999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 212 (494)
||+++++|.+++. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999999884 3899999999999999999999999 99999999999999776 8999999999865433
Q ss_pred -CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH--Hh----------------hhcc-----
Q 011092 213 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LI----------------RDRN----- 267 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~--~~----------------~~~~----- 267 (494)
....+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... .+ ....
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 34567899999999877 56899999999999999999999888432110 00 0000
Q ss_pred ---------ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 ---------LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.............+..++.++.+||.+||+.||.+|||+.++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000001111222335789999999999999999999999997
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=331.63 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=197.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc--CCC--EEEEEEecCCCCC---ChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE--NQR--RIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
..+++++.||+|+||+||+|.+. ++. .||||+++..... ..+.+.+|+.++.+++||||+++++++..++ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46788888999999999999853 233 6899999764322 2567899999999999999999999998754 89
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 212 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 212 (494)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 999999999999999753 356999999999999999999999999 999999999999999999999999998866433
Q ss_pred C-------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 213 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 213 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
. ...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............... ......+..+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~ 250 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPEDC 250 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTTC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc----CCCCCCCcCc
Confidence 2 2345778999999988888999999999999999999 88888654433222211111 1111223456
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 6889999999999999999999999999987754
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=340.43 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=202.6
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC---h--------------HHHHHHHHHHhccCCCCCccEE
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---P--------------RQFLEEARSVGQLRNNRLTNLL 122 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~--------------~~~~~E~~~l~~l~hpnIv~l~ 122 (494)
..+.+++.||+|+||.||+|.. +|+.||||++....... . +.|.+|+.++.+++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4677888889999999999999 89999999996432111 1 7899999999999999999999
Q ss_pred EEEecCCccceeeecCCCCCHHHH------hcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCC
Q 011092 123 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDED 195 (494)
Q Consensus 123 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~ 195 (494)
+++...+..++||||+++++|.++ +.......+++..++.++.||+.||.|||+ ++ ++||||||+||+++.+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKN 188 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCC
Confidence 999999999999999999999998 654335789999999999999999999999 88 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC--CccccCCCcCCCcCCCCC-CCCC-CCCchhHHHHHHHHHhCCCCCCCchh-HHhhhccccc
Q 011092 196 GNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTG-RVTP-ESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQM 270 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~sDv~slG~vl~elltg~~p~~~~~~-~~~~~~~~~~ 270 (494)
+.+||+|||++...... ....+|+.|+|||++.+. .++. ++||||||+++|+|++|..||..... ..........
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~ 268 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence 99999999998865432 345689999999999877 5666 99999999999999999998865432 1111111110
Q ss_pred cccccc-------------cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 LTDSCL-------------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 ~~~~~~-------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...... ........+..+.+|+.+||+.||.+|||+.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000 00011345688999999999999999999999987
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=338.09 Aligned_cols=246 Identities=13% Similarity=0.196 Sum_probs=196.5
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEec------CCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE------GDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~------~~~~ 131 (494)
..+++++.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.++.++ +||||+++++++.. .+..
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 102 (326)
T 2x7f_A 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 102 (326)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEE
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceE
Confidence 4566777789999999999996 568999999997543 3457899999999999 89999999999987 4578
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+++++|.+++.......+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++.....
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 103 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp EEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred EEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 99999999999999997544567999999999999999999999999 99999999999999999999999999876543
Q ss_pred C----CccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc
Q 011092 212 G----KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282 (494)
Q Consensus 212 ~----~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (494)
. ....+|+.|+|||++. +..++.++||||||+++|+|++|..||............ .........+.
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~ 257 (326)
T 2x7f_A 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRNPAPRLKSK 257 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHSCCCCCSCS
T ss_pred CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----hcCccccCCcc
Confidence 2 3456899999999986 456899999999999999999999988654322111110 01111111233
Q ss_pred hhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 283 DDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+..+.+++.+||..||.+|||+.++++
T Consensus 258 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 258 KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 45678999999999999999999999987
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=339.72 Aligned_cols=252 Identities=16% Similarity=0.223 Sum_probs=200.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhc--cCCCCCccEEEEEecCC----cccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQ--LRNNRLTNLLGCCCEGD----ERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~~~~~~----~~~lv 134 (494)
.+.+.+.||+|+||.||+|.. +|+.||||++... ....+.+|++++.. ++||||+++++++...+ ..++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 345666779999999999998 5889999999643 35678889999887 69999999999998876 78999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
|||+++|+|.+++.. ..+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 999999999999953 46999999999999999999999 788 999999999999999999999999998
Q ss_pred ccCCCC--------CccccCCCcCCCcCCCCCC------CCCCCCchhHHHHHHHHHhC----------CCCCCCch---
Q 011092 207 KNSRDG--------KSYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSG----------KHIPPSHA--- 259 (494)
Q Consensus 207 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~sDv~slG~vl~elltg----------~~p~~~~~--- 259 (494)
...... ....+|+.|+|||++.+.. ++.++||||||+++|||+|| ..||....
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 754432 2346899999999987652 34689999999999999999 55654321
Q ss_pred --hHHhhhccccccccccccCC-CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 260 --LDLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 260 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
...+..........+..... .....+..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 11111111111111111111 12356778999999999999999999999999999886653
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=349.73 Aligned_cols=253 Identities=17% Similarity=0.227 Sum_probs=201.4
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhcc------CCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL------RNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~hpnIv~l~~~~~~~~~~~l 133 (494)
.+++++.||+|+||+||+|... +++.||||+++... .....+.+|+.++..+ .|+||+++++++...+..++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 4777888899999999999954 58999999997532 1245677888888887 57799999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC--eEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~ 211 (494)
||||+. ++|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+|||++.++. +||+|||++.....
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 999996 79999997655567999999999999999999999999 999999999999999887 99999999976543
Q ss_pred C-CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc-----------------c--
Q 011092 212 G-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------------L-- 271 (494)
Q Consensus 212 ~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~-----------------~-- 271 (494)
. ....+|+.|+|||++.+..++.++|||||||++|||+||..||............... .
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~ 334 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence 3 4567899999999999888999999999999999999999888764322111000000 0
Q ss_pred -------------cc-----------------cc----ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 272 -------------TD-----------------SC----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 272 -------------~~-----------------~~----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
.+ +. +....+...++.+.+||.+||+.||.+|||+.++++ .++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~--Hpw~ 412 (429)
T 3kvw_A 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR--HPWL 412 (429)
T ss_dssp TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT--STTT
T ss_pred CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC--Chhh
Confidence 00 00 000011122577999999999999999999999998 4444
Q ss_pred c
Q 011092 318 K 318 (494)
Q Consensus 318 ~ 318 (494)
.
T Consensus 413 ~ 413 (429)
T 3kvw_A 413 R 413 (429)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=347.42 Aligned_cols=248 Identities=13% Similarity=0.068 Sum_probs=182.9
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC---hHHHHHHHHHHhcc--CCCCCccEE-------EEEec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQL--RNNRLTNLL-------GCCCE 127 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l--~hpnIv~l~-------~~~~~ 127 (494)
.+.+++.||+|+||+||+|... +|+.||||++....... .+.+.+|+.++..+ +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 3677788899999999999954 68999999998755322 44577785544444 699988755 44443
Q ss_pred C-----------------CccceeeecCCCCCHHHHhcccCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCccccc
Q 011092 128 G-----------------DERLLVAEYMPNETLAKHLFHWETHPMKWAMR------LRVVLHLAQALEYCTSKGRALYHD 184 (494)
Q Consensus 128 ~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~lH~~~~ivH~D 184 (494)
. ...++||||++ ++|.+++... ...+++..+ ..++.||+.||.|||+++ |+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCc
Confidence 3 23799999998 8999999753 223455555 778899999999999999 99999
Q ss_pred ccccceeecCCCCeEEcccCCcccCCCCC-ccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH
Q 011092 185 LNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 261 (494)
Q Consensus 185 lkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~~~~~~~ 261 (494)
|||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999998776544 5567799999999987 66899999999999999999999998765322
Q ss_pred Hhhhcc---ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 262 LIRDRN---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 262 ~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...... .............+..++..+.+|+.+||+.||.+|||+.++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111000 01111111111122356789999999999999999999999985
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=330.81 Aligned_cols=245 Identities=19% Similarity=0.220 Sum_probs=186.5
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC-h-HHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-P-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..+++++.||+|+||.||+|.. .+|+.||||+++...... . +.+.++...++.++||||+++++++..++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 4677888899999999999995 568999999997643221 2 234455556888899999999999999999999999
Q ss_pred cCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 137 YMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
|++ ++|.+++.. .....+++..+..|+.||+.||.|||++ + ++||||||+|||++.++.+||+|||++......
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 997 688887753 2356799999999999999999999998 8 999999999999999999999999998765433
Q ss_pred --CccccCCCcCCCcCC----CCCCCCCCCCchhHHHHHHHHHhCCCCCCCchh--HHhhhccccccccccccCCCCchh
Q 011092 213 --KSYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~----~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
....+|+.|+|||++ .+..++.++||||||+++|+|+||+.||..... ..+..... .......+...
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 239 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-----EPSPQLPADKF 239 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-----SCCCCCCTTTS
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc-----cCCCCcccccC
Confidence 234689999999995 456688999999999999999999998864221 11111111 11111122345
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+..+.+++.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 240 SAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 678999999999999999999999987
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=342.67 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=194.1
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC-----------
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG----------- 128 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----------- 128 (494)
.+.+++.||+|+||+||+|.. .+|+.||||++.... ..+.+|+.+++.++||||+++++++...
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 566777889999999999995 569999999996543 2234799999999999999999998543
Q ss_pred ---------------------------CccceeeecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011092 129 ---------------------------DERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGR 179 (494)
Q Consensus 129 ---------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ 179 (494)
...++||||++ ++|.+.+.. .....+++..+..++.||+.||.|||++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g- 161 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG- 161 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc-
Confidence 33789999998 688877753 24567999999999999999999999999
Q ss_pred cccccccccceeec-CCCCeEEcccCCcccCCCC---CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCC
Q 011092 180 ALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHI 254 (494)
Q Consensus 180 ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p 254 (494)
|+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|+.|
T Consensus 162 i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 241 (383)
T 3eb0_A 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL 241 (383)
T ss_dssp EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence 99999999999998 6899999999999865432 3456789999999987654 89999999999999999999999
Q ss_pred CCCchhHHhhhcccc-----------------------ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 255 PPSHALDLIRDRNLQ-----------------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
|.+............ ......+....+...+..+.+|+.+||+.||.+|||+.++++
T Consensus 242 f~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 242 FSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 876432211111100 000011111134456688999999999999999999999995
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-42 Score=332.78 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=200.4
Q ss_pred ccccccccCCCCCCCeEEEEEE--cCCCEEEEEEecCCCC--CChHHHHHHHHHHhcc---CCCCCccEEEEEe-----c
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL--ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQL---RNNRLTNLLGCCC-----E 127 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~-----~ 127 (494)
..+++++.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 3567788889999999999996 4588999999964322 2244677888888777 8999999999987 4
Q ss_pred CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 128 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
....++||||++ |+|.+++.......+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999998 79999997655566999999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------c-----
Q 011092 208 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------L----- 271 (494)
Q Consensus 208 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~--------~----- 271 (494)
..... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||............... .
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 3456789999999999888999999999999999999999988754322111110000 0
Q ss_pred -c-------cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 -T-------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 -~-------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. ...........++..+.+|+.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 000011223456788999999999999999999999995
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=328.15 Aligned_cols=249 Identities=17% Similarity=0.154 Sum_probs=203.6
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC---------ChHHHHHHHHHHhccC-CCCCccEEEEEe
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---------DPRQFLEEARSVGQLR-NNRLTNLLGCCC 126 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~-hpnIv~l~~~~~ 126 (494)
-+..+++++.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++.++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3456788888899999999999964 5899999999764321 1346789999999995 999999999999
Q ss_pred cCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 127 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
..+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999999974 356999999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC---CccccCCCcCCCcCCC------CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccccccc
Q 011092 207 KNSRDG---KSYSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 207 ~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (494)
...... ....+++.|+|||++. ...++.++||||||+++|+|++|..||.................. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~ 249 (298)
T 1phk_A 172 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--FG 249 (298)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CC
T ss_pred hhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc--cC
Confidence 765433 3456889999999874 456889999999999999999999988654333222111111100 11
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.......+..+.+++.+||+.||.+|||+.++++
T Consensus 250 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1112345688999999999999999999999986
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=332.61 Aligned_cols=251 Identities=18% Similarity=0.203 Sum_probs=180.4
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHH-HHhccCCCCCccEEEEEecCCccceee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
...+++++.||+|+||.||+|.. .+|+.||||++...... ....+..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35677788889999999999996 46899999999765322 2345666666 777789999999999999999999999
Q ss_pred ecCCCCCHHHHhcc---cCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 136 EYMPNETLAKHLFH---WETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 136 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
||++ ++|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+|||++.++.+||+|||+++....
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9998 588887752 1256799999999999999999999998 8 99999999999999999999999999876543
Q ss_pred C---CccccCCCcCCCcCC----CCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 212 G---KSYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 212 ~---~~~~~t~~y~aPE~~----~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
. ....||+.|+|||++ .+..++.++||||||+++|+|++|+.||..................+..........
T Consensus 179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3aln_A 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREF 258 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCC
T ss_pred ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccC
Confidence 3 233688999999998 455689999999999999999999998865321100000001111111111222346
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+..+.+|+.+||+.||.+|||+.++++
T Consensus 259 ~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 259 SPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 688999999999999999999999986
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=335.65 Aligned_cols=241 Identities=16% Similarity=0.201 Sum_probs=193.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC--------CChHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--------PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
.|.+++.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++||||+++++++..++ .
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~ 89 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-Y 89 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-e
Confidence 4677788899999999999954 588999999965321 12345889999999999999999999997654 8
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC---eEEcccCCccc
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKN 208 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgla~~ 208 (494)
++||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++..
T Consensus 90 ~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999999886 3567999999999999999999999999 999999999999986654 99999999987
Q ss_pred CCCCC---ccccCCCcCCCcCCC---CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-----Hhhhcccccccccccc
Q 011092 209 SRDGK---SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNLQMLTDSCLE 277 (494)
Q Consensus 209 ~~~~~---~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 277 (494)
..... ...||+.|+|||++. ...++.++||||||+++|+|++|..||...... .+.........
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 241 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP----- 241 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCH-----
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCc-----
Confidence 65432 346899999999863 456889999999999999999999988643211 11111111000
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+...+..+.+++.+||+.||.+|||+.++++
T Consensus 242 -~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 242 -EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 011234578999999999999999999999986
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-42 Score=337.96 Aligned_cols=262 Identities=15% Similarity=0.211 Sum_probs=197.6
Q ss_pred HHHHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC-----------hHHHHHHHHHHhccCCCC
Q 011092 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-----------PRQFLEEARSVGQLRNNR 117 (494)
Q Consensus 49 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~hpn 117 (494)
..++....++|. +++.||+|+||.||+|...+|..||||++....... .+.+.+|+.++++++|||
T Consensus 14 ~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 14 IAELHAMQSPYT---VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHTTCSCE---EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHhccceE---EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 456666666655 555669999999999998789999999996533221 267899999999999999
Q ss_pred CccEEEEEecC-----CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee
Q 011092 118 LTNLLGCCCEG-----DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192 (494)
Q Consensus 118 Iv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill 192 (494)
|+++++++... ...++||||++ |+|.+.+.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILL 167 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEE
Confidence 99999998543 35799999997 688888864 3457999999999999999999999999 9999999999999
Q ss_pred cCCCCeEEcccCCcccCCCC---CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc
Q 011092 193 DEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 193 ~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~ 268 (494)
+.++.+||+|||+++..... ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.............
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999999999754332 34567899999999876 568999999999999999999999987643222111110
Q ss_pred ccc-----------------------ccc---cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 269 QML-----------------------TDS---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 269 ~~~-----------------------~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
... ... ......+...++.+.+|+.+||+.||.+|||+.++++ .++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f~ 321 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR--HPYFE 321 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGGT
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc--Cchhh
Confidence 000 000 0000112234578999999999999999999999997 44443
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=341.98 Aligned_cols=246 Identities=19% Similarity=0.263 Sum_probs=196.3
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCC-----ccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~~l 133 (494)
.|.+++.||+|+||.||+|... ++..||||++....... .+.+.+|+.++.+++||||+++++++.... ..++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 5777888899999999999954 68899999997543222 467899999999999999999999997653 5799
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+. ++|.+++. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 v~e~~~-~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLME-TDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCS-EEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccC-cCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 999997 69999885 356999999999999999999999999 999999999999999999999999999765422
Q ss_pred ------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc--------------
Q 011092 213 ------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------------- 271 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~-------------- 271 (494)
....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...............+
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 33478999999998754 458999999999999999999999986543221111110000
Q ss_pred ---------ccc--cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 272 ---------TDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 272 ---------~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... ..........+..+.+|+.+||+.||.+|||+.++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000011234578999999999999999999999997
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-42 Score=336.45 Aligned_cols=246 Identities=15% Similarity=0.216 Sum_probs=195.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecC-----Cccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~~~~l 133 (494)
.+.+++.||+|+||.||+|... +|+.||||++...... ....+.+|+.++++++||||+++++++... ...++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 5667788899999999999964 5899999999654321 245688999999999999999999998764 56899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 212 (494)
||||+. ++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 92 v~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp EECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 999997 799998853 57999999999999999999999999 999999999999999999999999998865421
Q ss_pred -------------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc---------
Q 011092 213 -------------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------- 269 (494)
Q Consensus 213 -------------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~--------- 269 (494)
....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||..............
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTT
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhc
Confidence 12467899999998764 6689999999999999999999999876532211100000
Q ss_pred ---c------------ccc--ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ---M------------LTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ---~------------~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. +.. ...........+..+.+|+.+||+.||.+|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000 00000011245678999999999999999999999997
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=346.53 Aligned_cols=245 Identities=23% Similarity=0.254 Sum_probs=191.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC------Cccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~~~l 133 (494)
.|.+++.||+|+||+||+|... +|+.||||++.... ..+.+|+++++.++|||||++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4677788899999999999964 58999999996542 2334799999999999999999998542 23679
Q ss_pred eeecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-CCeEEcccCCcccCC
Q 011092 134 VAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 210 (494)
||||++ ++|.+.+.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 999998 567666643 23567999999999999999999999999 9999999999999955 568999999998654
Q ss_pred CC---CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc-----------------
Q 011092 211 DG---KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----------------- 269 (494)
Q Consensus 211 ~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~----------------- 269 (494)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+............
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 345789999999998765 689999999999999999999999876432111110000
Q ss_pred -ccc-----cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 -MLT-----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 -~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... ...+...++...+.++.+||.+||+.||.+|||+.++++
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000 000000123345688999999999999999999999986
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=335.42 Aligned_cols=245 Identities=17% Similarity=0.231 Sum_probs=194.1
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCcc------
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER------ 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~------ 131 (494)
.+.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 456677789999999999995 468999999997644322 46788999999999999999999999887655
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+. ++|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99999997 78988873 45999999999999999999999999 99999999999999999999999999986544
Q ss_pred C-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc-------------------
Q 011092 212 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------- 270 (494)
Q Consensus 212 ~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~------------------- 270 (494)
. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||...............
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence 3 34578999999999887 67899999999999999999999998764322111111000
Q ss_pred ----cccccc--cCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 ----LTDSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 ----~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+..... ....+...+..+.+|+.+||+.||.+|||+.++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000000 00011234678999999999999999999999997
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-42 Score=334.70 Aligned_cols=245 Identities=14% Similarity=0.158 Sum_probs=173.2
Q ss_pred cccccc-cCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHH-HHHhccCCCCCccEEEEEec----CCccce
Q 011092 61 VENIVS-EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEA-RSVGQLRNNRLTNLLGCCCE----GDERLL 133 (494)
Q Consensus 61 ~~~~i~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~l~~~~~~----~~~~~l 133 (494)
.+.+++ .||+|+||.||+|... +|+.||||++... . ...+|+ ..+..++||||+++++++.. ....++
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~-~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----P-KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----H-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----H-HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 556655 4799999999999965 6899999999652 2 233333 34566699999999999976 445899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccCCcccCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSR 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 210 (494)
||||++||+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++...
T Consensus 104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 999999999999998655567999999999999999999999999 999999999999975 4569999999997654
Q ss_pred CC--CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccc--ccccCCCCchhHH
Q 011092 211 DG--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--SCLEGQFTDDDGT 286 (494)
Q Consensus 211 ~~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 286 (494)
.. ....+|+.|+|||++.+..++.++||||||+++|+|++|..||...............+.. ..........++.
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (336)
T 3fhr_A 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE 262 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCH
T ss_pred ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCH
Confidence 33 3456799999999998888999999999999999999999998654332221111111111 1111112235668
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+|+.+||+.||.+|||+.++++
T Consensus 263 ~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 263 DAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 8999999999999999999999997
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=339.78 Aligned_cols=245 Identities=20% Similarity=0.245 Sum_probs=191.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCc------ccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------RLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~------~~lv 134 (494)
.|.+++.||+|+||+||+|....+..||+|++..... ...+|+.+++.++||||+++++++...+. .++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 5778888899999999999987766799998865332 23479999999999999999999965443 7899
Q ss_pred eecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEcccCCcccCCC
Q 011092 135 AEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 211 (494)
|||++++ |.+.+.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++....
T Consensus 117 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 117 LEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 9999854 4443331 13567999999999999999999999999 99999999999999 899999999999986533
Q ss_pred ---CCccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc------------------
Q 011092 212 ---GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------ 269 (494)
Q Consensus 212 ---~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~------------------ 269 (494)
.....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+............
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2356789999999998765 489999999999999999999999876532211110000
Q ss_pred -----ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 -----MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 -----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
......+...++...+.++.+|+.+||+.||.+|||+.++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000000111122345678999999999999999999999997
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-43 Score=350.68 Aligned_cols=249 Identities=14% Similarity=0.193 Sum_probs=198.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC--------CCCCccEEEEEe----
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--------NNRLTNLLGCCC---- 126 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------hpnIv~l~~~~~---- 126 (494)
..|.+++.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+.+++.++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 4577888889999999999995 458899999997432 22467889999999995 788999999997
Q ss_pred cCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCC---------
Q 011092 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG--------- 196 (494)
Q Consensus 127 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~--------- 196 (494)
.+...++||||+ +++|.+.+.......+++..++.|+.||+.||.|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 556789999999 56777777654446799999999999999999999998 8 99999999999999775
Q ss_pred ----------------------------------------CeEEcccCCcccCCCC-CccccCCCcCCCcCCCCCCCCCC
Q 011092 197 ----------------------------------------NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPE 235 (494)
Q Consensus 197 ----------------------------------------~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~ 235 (494)
.+||+|||++...... ....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 8999999999765433 34578999999999998889999
Q ss_pred CCchhHHHHHHHHHhCCCCCCCchhH-------Hhh---h------------ccc-----------ccccccc-------
Q 011092 236 SVIYSFGTLLLDLLSGKHIPPSHALD-------LIR---D------------RNL-----------QMLTDSC------- 275 (494)
Q Consensus 236 sDv~slG~vl~elltg~~p~~~~~~~-------~~~---~------------~~~-----------~~~~~~~------- 275 (494)
+|||||||++|+|+||+.||...... .+. . ... ..+....
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 99999999999999999988643210 000 0 000 0000000
Q ss_pred --ccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 276 --LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 276 --~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.....+...+..+.+||.+||+.||.+|||+.++++
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001234566788999999999999999999999987
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=333.24 Aligned_cols=247 Identities=17% Similarity=0.221 Sum_probs=191.3
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEe------------
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC------------ 126 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~------------ 126 (494)
..+.+++.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 35778888999999999999965 48999999997655444577899999999999999999999874
Q ss_pred --cCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEccc
Q 011092 127 --EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTF 203 (494)
Q Consensus 127 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Df 203 (494)
..+..++||||++ |+|.+++. ..++++..+..++.||+.||.|||+++ |+||||||+|||++ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccC
Confidence 3356799999997 69999984 467999999999999999999999999 99999999999997 6679999999
Q ss_pred CCcccCCCC-------CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccc---
Q 011092 204 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--- 272 (494)
Q Consensus 204 gla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~--- 272 (494)
|+++..... ....+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.................
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 998865321 23456889999998865 5689999999999999999999999875432211111100000
Q ss_pred --------------------cc-cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 273 --------------------DS-CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 273 --------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+ ..........+..+.+++.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00 0000012245678999999999999999999999987
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=339.64 Aligned_cols=253 Identities=16% Similarity=0.241 Sum_probs=183.7
Q ss_pred ccccc-cCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec--CCccceee
Q 011092 62 ENIVS-EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVA 135 (494)
Q Consensus 62 ~~~i~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~lv~ 135 (494)
+++.+ .||+|+||+||+|... ++..||||++.... ....+.+|+.++++++||||+++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 44444 6899999999999964 47899999997543 34578999999999999999999999954 66789999
Q ss_pred ecCCCCCHHHHhccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee----cCCCCeEEcccC
Q 011092 136 EYMPNETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFG 204 (494)
Q Consensus 136 e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg 204 (494)
||+. ++|.+++... ....+++..++.|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 9997 6888877521 1235999999999999999999999999 9999999999999 678999999999
Q ss_pred CcccCCCC-------CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhh---------hcc
Q 011092 205 LMKNSRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---------DRN 267 (494)
Q Consensus 205 la~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~---------~~~ 267 (494)
+++..... ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||......... ...
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 99865432 245689999999999874 4899999999999999999999988543221000 000
Q ss_pred cccc--c----------------------ccccc--------CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcc
Q 011092 268 LQML--T----------------------DSCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 268 ~~~~--~----------------------~~~~~--------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
...+ + ..... .......+..+.+||.+||+.||.+|||+.++++ ..
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~--hp 335 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ--DP 335 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT--SG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc--Ch
Confidence 0000 0 00000 0000111467889999999999999999999998 56
Q ss_pred ccccC
Q 011092 316 LQKET 320 (494)
Q Consensus 316 ~~~~~ 320 (494)
+....
T Consensus 336 ~f~~~ 340 (405)
T 3rgf_A 336 YFLED 340 (405)
T ss_dssp GGTSS
T ss_pred hhccC
Confidence 65543
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=333.30 Aligned_cols=255 Identities=20% Similarity=0.227 Sum_probs=188.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCc-------c
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-------R 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-------~ 131 (494)
..+.+++.||+|+||.||+|.. .+|..||||++.... .....+.+++..+..++||||+++++++...+. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 3456777779999999999996 468999999986543 234567888999999999999999999976433 7
Q ss_pred ceeeecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCcccccccccceeecC-CCCeEEcccCCc
Q 011092 132 LLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCT--SKGRALYHDLNAYRILFDE-DGNPRLSTFGLM 206 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH--~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla 206 (494)
++||||+++ +|.+.+.. .....+++..+..++.||+.||.||| +.+ |+||||||+|||++. ++.+||+|||++
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 899999985 55554432 23567899999999999999999999 898 999999999999996 899999999999
Q ss_pred ccCCCC---CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc-----------
Q 011092 207 KNSRDG---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML----------- 271 (494)
Q Consensus 207 ~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~----------- 271 (494)
+..... ....+|+.|+|||++.+.. ++.++|||||||++|+|+||+.||................
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhc
Confidence 865543 3456799999999987654 8999999999999999999999987643322111110000
Q ss_pred ---------------ccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 272 ---------------TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 272 ---------------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.-.......+...+..+.+|+.+||+.||.+|||+.++++ .++...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~ 320 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC--HPYFDE 320 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT--SGGGGG
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc--Cccccc
Confidence 0000011222335789999999999999999999999997 444443
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=332.12 Aligned_cols=249 Identities=17% Similarity=0.183 Sum_probs=201.6
Q ss_pred ccccccccCCCCCCCeEEEEEE-c-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCC------CccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-E-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR------LTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn------Iv~l~~~~~~~~~~ 131 (494)
..+++++.||+|+||.||+|.. . +++.||||+++... ...+.+.+|+.++..++|+| |+++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 3577888889999999999986 3 58899999996532 22467889999999987654 99999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-----------------
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----------------- 194 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~----------------- 194 (494)
++||||+ +++|.+++......++++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 799999997655567999999999999999999999999 999999999999987
Q ss_pred --CCCeEEcccCCcccCCCC-CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc---c
Q 011092 195 --DGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---L 268 (494)
Q Consensus 195 --~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~---~ 268 (494)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|..||............ .
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999999865443 4567899999999999888999999999999999999999998754322111000 0
Q ss_pred cccc-----------------------------------cccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 QMLT-----------------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 ~~~~-----------------------------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+ ........+...+..+.+|+.+||+.||.+|||+.++++
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 0000 000001123455788999999999999999999999986
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=359.80 Aligned_cols=251 Identities=20% Similarity=0.268 Sum_probs=204.1
Q ss_pred ccccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
..+++.+.||+|+||.||+|.... +..||||.++...... .+.|.+|+.++++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 456777888999999999999632 4579999987543222 467999999999999999999999985 4668999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 213 (494)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999998664432
Q ss_pred ----ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 214 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 214 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
...+|+.|+|||++.+..++.++||||||+++|||++ |..||............... .....+..++..+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-----CCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHHH
Confidence 2345678999999988889999999999999999997 88887654332222111111 1112344566899
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999987753
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=327.23 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=191.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEec------------
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE------------ 127 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------------ 127 (494)
.+++++.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++..
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 466777789999999999995 468999999996432 234678899999999999999999998865
Q ss_pred -CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCc
Q 011092 128 -GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 206 (494)
Q Consensus 128 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 206 (494)
.+..++||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3467999999999999999974 3456888999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC------------------CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchh-HHhhhc
Q 011092 207 KNSRDG------------------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDR 266 (494)
Q Consensus 207 ~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~-~~~~~~ 266 (494)
...... ....+|+.|+|||++.+. .++.++||||||+++|+|++ |+..... ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 765321 234578999999998764 68999999999999999998 3432211 111111
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... .....+...+...+..+.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 241 LRS--VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHS--TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccc--cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 100 1111223345556678999999999999999999999998
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=322.73 Aligned_cols=245 Identities=19% Similarity=0.190 Sum_probs=200.2
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCC--CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.+++++.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 102 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEc
Confidence 5677888899999999999965 68999999996532 23467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC---CCeEEcccCCcccCCCCC-
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~- 213 (494)
+++++|.+.+.. ...+++..++.++.||+.||.|||+++ ++||||||+||+++.+ +.+||+|||++.......
T Consensus 103 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 999999998864 346999999999999999999999999 9999999999999754 479999999987654432
Q ss_pred --ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 214 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 214 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
...+|+.|+|||.+.+ .++.++||||||+++|+|++|..||.......+........... .......++..+.++
T Consensus 180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 256 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKDL 256 (287)
T ss_dssp CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGTTSCHHHHHH
T ss_pred cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CchhhhhcCHHHHHH
Confidence 3357889999999875 58999999999999999999999887654332222111110000 000112345789999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||+.++++
T Consensus 257 i~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 257 IRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcccChhhCcCHHHHhc
Confidence 99999999999999999997
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-41 Score=330.75 Aligned_cols=245 Identities=18% Similarity=0.222 Sum_probs=194.2
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCc------c
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------R 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~------~ 131 (494)
.+.+.+.||.|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+. .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 466677789999999999995 468999999997643222 4578899999999999999999999987654 4
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+. ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 105 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred EEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 99999997 78888773 35999999999999999999999999 99999999999999999999999999876543
Q ss_pred C-CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc---------------------
Q 011092 212 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------- 268 (494)
Q Consensus 212 ~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--------------------- 268 (494)
. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.............
T Consensus 179 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 3coi_A 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258 (353)
T ss_dssp -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence 3 34578999999999876 568999999999999999999999886543221111000
Q ss_pred --ccccc--ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 --QMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 --~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.. ...........+..+.+|+.+||+.||.+|||+.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 00011223356789999999999999999999999986
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=326.94 Aligned_cols=244 Identities=19% Similarity=0.285 Sum_probs=195.1
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccC--CCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~lv~ 135 (494)
..+.+++.||+|+||.||++...+++.||||++...... ..+.+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 357778888999999999999878999999999754332 2467899999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
| +.+++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||+++ +.+||+|||++......
T Consensus 108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 9 457999999974 457999999999999999999999999 999999999999964 88999999998765432
Q ss_pred ---CccccCCCcCCCcCCCC-----------CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccC
Q 011092 213 ---KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
....+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||......... ...........
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---HHHHHhccccc
Confidence 23467999999999875 46788999999999999999999988653211110 01111111122
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+...+..+.+++.+||+.||.+|||+.++++
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 334444678999999999999999999999987
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=336.15 Aligned_cols=249 Identities=18% Similarity=0.226 Sum_probs=198.6
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-----------CCCCccEEEEEec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----------NNRLTNLLGCCCE 127 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------hpnIv~l~~~~~~ 127 (494)
..+.+++.||+|+||+||+|.. .+++.||||++.... .....+.+|+.++.+++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4677888889999999999995 568999999997432 12456889999999886 8999999999986
Q ss_pred CC----ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeec------CCC
Q 011092 128 GD----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFD------EDG 196 (494)
Q Consensus 128 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~------~~~ 196 (494)
.+ ..++||||+ +++|.+++.......+++..+..|+.||+.||.|||++ + |+||||||+|||++ ..+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcc
Confidence 54 689999999 89999999765566799999999999999999999998 9 99999999999994 445
Q ss_pred CeEEcccCCcccCCCC-CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHH-------hhhc--
Q 011092 197 NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-------IRDR-- 266 (494)
Q Consensus 197 ~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~-------~~~~-- 266 (494)
.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|||+||..||....... +...
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 7999999999865443 34578999999999998889999999999999999999999886432110 0000
Q ss_pred ------------------------ccccccc---------ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 267 ------------------------NLQMLTD---------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 267 ------------------------~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
....+.. .......+...+..+.+||.+||+.||.+|||+.++++
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 0000000 00011345567889999999999999999999999997
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=327.66 Aligned_cols=236 Identities=20% Similarity=0.310 Sum_probs=192.3
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC------ChHHHHHHHHHHhcc----CCCCCccEEEEEecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQL----RNNRLTNLLGCCCEGD 129 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~hpnIv~l~~~~~~~~ 129 (494)
.+++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++.++ +||||+++++++...+
T Consensus 32 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~ 111 (312)
T 2iwi_A 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE 111 (312)
T ss_dssp -CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred ceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC
Confidence 466777779999999999994 56899999999764322 233466899999999 8999999999999999
Q ss_pred ccceeeec-CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEcccCCcc
Q 011092 130 ERLLVAEY-MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMK 207 (494)
Q Consensus 130 ~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~ 207 (494)
..++|||| +.+++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||++.
T Consensus 112 ~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 112 GFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp -CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred eEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence 99999999 789999999974 356999999999999999999999999 99999999999999 88999999999988
Q ss_pred cCCCC--CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchh
Q 011092 208 NSRDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284 (494)
Q Consensus 208 ~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (494)
..... ....+|..|+|||++.+..+ +.++||||||+++|+|++|+.||..... +... ....+...
T Consensus 189 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~----------~~~~~~~~ 256 (312)
T 2iwi_A 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--ILEA----------ELHFPAHV 256 (312)
T ss_dssp ECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHT----------CCCCCTTS
T ss_pred hcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhhh----------ccCCcccC
Confidence 65443 34568999999999876665 4589999999999999999988865321 1111 11233455
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+..+.+++.+||+.||.+|||+.++++
T Consensus 257 ~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 257 SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 678999999999999999999999998
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=330.86 Aligned_cols=237 Identities=19% Similarity=0.293 Sum_probs=199.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC------ChHHHHHHHHHHhccC--CCCCccEEEEEecCCc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 130 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~ 130 (494)
..+++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++ ||||+++++++..++.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 4577888889999999999995 56899999999754322 2356778999999996 5999999999999999
Q ss_pred cceeeecCCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec-CCCCeEEcccCCccc
Q 011092 131 RLLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKN 208 (494)
Q Consensus 131 ~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~ 208 (494)
.++|||++.+ ++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ +++.+||+|||++..
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 9999999976 899999874 357999999999999999999999999 99999999999999 789999999999886
Q ss_pred CCCC--CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 209 SRDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 209 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
.... ....+|+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ..... ...+...+
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~----------~~~~~~~~ 267 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQ----------VFFRQRVS 267 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCC----------CCCSSCCC
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hhccc----------ccccccCC
Confidence 6543 34568999999999876665 6789999999999999999988865421 11110 11233456
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+|+.+||+.||.+|||+.++++
T Consensus 268 ~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 268 SECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 78999999999999999999999987
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=332.54 Aligned_cols=196 Identities=17% Similarity=0.153 Sum_probs=168.6
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCC-----CccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNR-----LTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpn-----Iv~l~~~~~~~~~~~ 132 (494)
..+++++.||+|+||+||+|... +++.||||+++... .....+..|+.++..++ |+| |+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45677788899999999999954 58899999997432 12456778999998884 554 999999999999999
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh--cCCcccccccccceeec--CCCCeEEcccCCccc
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--KGRALYHDLNAYRILFD--EDGNPRLSTFGLMKN 208 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~ivH~Dlkp~Nill~--~~~~~kl~Dfgla~~ 208 (494)
+||||++ ++|.+++.......+++..+..++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 9999996 699999976555679999999999999999999994 67 99999999999995 578899999999987
Q ss_pred CCCC-CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc
Q 011092 209 SRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 258 (494)
Q Consensus 209 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~ 258 (494)
.... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543 4567899999999999989999999999999999999999998754
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-41 Score=348.57 Aligned_cols=250 Identities=17% Similarity=0.199 Sum_probs=196.7
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEec------CCc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE------GDE 130 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------~~~ 130 (494)
+..+++++.||.|+||.||+|.. .+|+.||||++...... ..+.+.+|+.++.+++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 45678888999999999999995 56899999998764321 25678999999999999999999999766 667
Q ss_pred cceeeecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCC---eEEcccCCc
Q 011092 131 RLLVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLM 206 (494)
Q Consensus 131 ~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgla 206 (494)
.++||||++||+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 899999999999999997532 236899999999999999999999999 999999999999997765 899999999
Q ss_pred ccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHh-hh-----------------
Q 011092 207 KNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-RD----------------- 265 (494)
Q Consensus 207 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~-~~----------------- 265 (494)
...... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||........ ..
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 251 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhc
Confidence 875443 345789999999999989999999999999999999999999865321110 00
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHH
Q 011092 266 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309 (494)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 309 (494)
+..............+..++..+.+++.+||..||.+|||+.++
T Consensus 252 g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp SSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 00000000111223455688999999999999999999999774
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=337.19 Aligned_cols=239 Identities=19% Similarity=0.140 Sum_probs=184.0
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCCCCH
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL 143 (494)
.+.||+|+||+||.+...+|+.||||++.... .+.+.+|+.++.++ +||||+++++++..++..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 35579999999987776789999999986532 45688999999987 89999999999999999999999996 799
Q ss_pred HHHhcccCCCC-----CCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC-------------CCeEEcccCC
Q 011092 144 AKHLFHWETHP-----MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-------------GNPRLSTFGL 205 (494)
Q Consensus 144 ~~~l~~~~~~~-----l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~-------------~~~kl~Dfgl 205 (494)
.+++....... .++..++.|+.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~ 174 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence 99997432111 123345789999999999999999 9999999999999754 4799999999
Q ss_pred cccCCCCC--------ccccCCCcCCCcCCCC-------CCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHH--hhhcc
Q 011092 206 MKNSRDGK--------SYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDL--IRDRN 267 (494)
Q Consensus 206 a~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~--~~~~~ 267 (494)
++...... ...||+.|+|||++.+ ..++.++|||||||++|||+| |..||....... +....
T Consensus 175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~ 254 (434)
T 2rio_A 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 254 (434)
T ss_dssp CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTC
T ss_pred ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCC
Confidence 98765422 3468999999999875 568999999999999999999 888875432221 11111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
. .............+.++.+++.+||+.||.+|||+.++++
T Consensus 255 ~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 255 F---SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp C---CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C---CcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0 0111111223456789999999999999999999999986
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=317.50 Aligned_cols=230 Identities=15% Similarity=0.140 Sum_probs=184.7
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
.|++++.||+|+||.||+|... +|+.||||++....... .+.|.+|+.++.+++||||+++++++...+..|+|||
T Consensus 32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 111 (286)
T 3uqc_A 32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE 111 (286)
T ss_dssp TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence 4777788899999999999965 48999999998655433 3678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCccc
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 216 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 216 (494)
|++|++|.+++.. + .....+..|+.||+.||.|||++| |+||||||+|||++.++.+||+++|
T Consensus 112 ~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~------------ 174 (286)
T 3uqc_A 112 WIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA------------ 174 (286)
T ss_dssp CCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC------------
T ss_pred ecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc------------
Confidence 9999999999942 2 456678899999999999999999 9999999999999999999998544
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccc-ccccCCCCchhHHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-SCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~c 295 (494)
|++ +++.++||||||+++|+|+||+.||.................. ..........++..+.+++.+|
T Consensus 175 ----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 243 (286)
T 3uqc_A 175 ----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARS 243 (286)
T ss_dssp ----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHH
T ss_pred ----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHH
Confidence 333 3788999999999999999999998764321100000000000 0000112234567899999999
Q ss_pred ccCCCCCCCChHHHHHHhcccccc
Q 011092 296 LQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
|+.||.+| |+.++++.|+.+...
T Consensus 244 l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 244 VQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred cccCCccC-CHHHHHHHHHHHhcc
Confidence 99999999 999999999987654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=327.93 Aligned_cols=249 Identities=15% Similarity=0.144 Sum_probs=198.5
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CC-CEEEEEEecCCCCCChHHHHHHHHHHhccCCCC------CccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQ-RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR------LTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn------Iv~l~~~~~~~~~~ 131 (494)
..+++++.||+|+||.||+|... ++ ..||||+++... ...+.+.+|+.+++.++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 35778888899999999999964 44 689999997532 22467888999999997766 89999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceee-------------------
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF------------------- 192 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill------------------- 192 (494)
++||||+ +++|.+.+......++++..+..|+.||+.||.|||+++ |+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 577777776544567999999999999999999999999 9999999999999
Q ss_pred cCCCCeEEcccCCcccCCCC-CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc---c
Q 011092 193 DEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---L 268 (494)
Q Consensus 193 ~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~---~ 268 (494)
+.++.+||+|||+++..... ....||+.|+|||++.+..++.++||||||+++|||++|..||............ .
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 4567899999999999889999999999999999999999998754322111000 0
Q ss_pred ccccc-----------------------------------ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 269 QMLTD-----------------------------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 269 ~~~~~-----------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
...+. ...........+..+.+|+.+||+.||.+|||+.++++
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000 00000112344678999999999999999999999986
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=321.75 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=180.6
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCC-h-HHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD-P-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+..+++++.||+|+||.||+|... +|+.||||++....... . +.+..+..++..++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456788889999999999999964 68999999997654221 2 23444556788889999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
||+ ++.+..+... ....+++..+..++.||+.||.|||++ + ++||||||+|||++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 999 5666655542 346799999999999999999999996 8 999999999999999999999999998765432
Q ss_pred -CccccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-HhhhccccccccccccCCCCchhH
Q 011092 213 -KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
....+|+.|+|||++. ...++.++||||||+++|+|++|+.||...... ........... ... ......+
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~ 257 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-PLL--PGHMGFS 257 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC-CCC--CSSSCCC
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC-CCC--CccCCCC
Confidence 2346889999999984 456888999999999999999999888652211 11111111100 000 1112356
Q ss_pred HHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 286 TELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..+.+++.+||+.||.+|||+.++++
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 78999999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=333.47 Aligned_cols=242 Identities=16% Similarity=0.123 Sum_probs=185.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.+.+.+.||+|+||+||.....+|+.||||++.... ...+.+|+.+++.+ +|||||++++++...+..++||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 345556679999999766556678999999996533 34567899999999 89999999999999999999999996
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-----CCCeEEcccCCcccCCCC--
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-----~~~~kl~Dfgla~~~~~~-- 212 (494)
|+|.+++... ...+++..+..|+.||+.||.|||+++ |+||||||+|||++. ...+||+|||+++.....
T Consensus 102 -g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 7999999753 234555567889999999999999999 999999999999953 335889999999865432
Q ss_pred -----CccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCch
Q 011092 213 -----KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
....||+.|+|||++.+ ..++.++|||||||++|||+| |..||........... ....... .......
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-~~~~~~~--~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGACSLD--CLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-TTCCCCT--TSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-hccCCcc--ccCcccc
Confidence 23568999999999973 557889999999999999999 7777644322221111 0100000 1112334
Q ss_pred hHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 284 DGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+..+.+||.+||+.||.+|||+.++++
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 5677899999999999999999999995
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=312.26 Aligned_cols=225 Identities=15% Similarity=0.152 Sum_probs=180.2
Q ss_pred ccccc-ccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHH-hccCCCCCccEEEEEec----CCccce
Q 011092 61 VENIV-SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCE----GDERLL 133 (494)
Q Consensus 61 ~~~~i-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~hpnIv~l~~~~~~----~~~~~l 133 (494)
.+.++ +.||+|+||.||++.. .+++.||||+++. ...+.+|+.++ +.++||||+++++++.. ....++
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 45555 5579999999999995 5689999999964 35678899988 55599999999999976 667899
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccCCcccCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSR 210 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 210 (494)
||||++|++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 999999999999998655567999999999999999999999999 999999999999997 7899999999986532
Q ss_pred CCCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCC----chhHH
Q 011092 211 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT----DDDGT 286 (494)
Q Consensus 211 ~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 286 (494)
+..++.++||||||+++|+|+||..||...............+..... ..+ ...+.
T Consensus 172 ------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 231 (299)
T 3m2w_A 172 ------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEWSEVSE 231 (299)
T ss_dssp ------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCC--SSCHHHHTTSCH
T ss_pred ------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccc--cCCchhcccCCH
Confidence 245788999999999999999999998654332221111111111110 111 23567
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+++.+||+.||.+|||+.++++
T Consensus 232 ~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 232 EVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHcccChhhCCCHHHHhc
Confidence 8999999999999999999999997
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=322.58 Aligned_cols=237 Identities=16% Similarity=0.121 Sum_probs=178.5
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC---ChHHHHHHHHHHhccCC-CCCc-----------------
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRN-NRLT----------------- 119 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-pnIv----------------- 119 (494)
+.+.+.||+|+||+||+|.. .+|+.||||++...... ..+.|.+|+.++..++| +|+.
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 44556679999999999994 56999999999743322 25789999999999987 3211
Q ss_pred ----cEEEEEec-----CCccceeeecCCCCCHHHHhc-----ccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q 011092 120 ----NLLGCCCE-----GDERLLVAEYMPNETLAKHLF-----HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185 (494)
Q Consensus 120 ----~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dl 185 (494)
.+..++.. ....+++|+++ +++|.+++. ......+++..++.|+.||+.||.|||+++ |+||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDi 237 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYL 237 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCc
Confidence 11111111 12356777776 599999884 112445788899999999999999999999 999999
Q ss_pred cccceeecCCCCeEEcccCCcccCCCC-CccccCCCcCCCcCC----------CCCCCCCCCCchhHHHHHHHHHhCCCC
Q 011092 186 NAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHI 254 (494)
Q Consensus 186 kp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~sDv~slG~vl~elltg~~p 254 (494)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998765433 34456 999999998 555688899999999999999999999
Q ss_pred CCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 255 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
|........... +.. ....++..+.+|+.+||+.||.+|||+.++++
T Consensus 317 f~~~~~~~~~~~----~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSEW----IFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSGG----GGS------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHHH----HHh------hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 875432211111 111 01134578999999999999999999877753
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=318.88 Aligned_cols=239 Identities=13% Similarity=0.099 Sum_probs=185.1
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC--------CChHHHHHHHHHHhccC---------CCCCccEE
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--------PDPRQFLEEARSVGQLR---------NNRLTNLL 122 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------hpnIv~l~ 122 (494)
..+.+++.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+.+++.++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4567788889999999999998 789999999976432 12477899999999886 77877777
Q ss_pred EEEe-----------------c-------------CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHH
Q 011092 123 GCCC-----------------E-------------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE 172 (494)
Q Consensus 123 ~~~~-----------------~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 172 (494)
+++. . .+..++||||+++|++.+.+. ...+++..+..|+.||+.||.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHH
Confidence 7643 2 578999999999997766663 356899999999999999999
Q ss_pred HHH-hcCCcccccccccceeecCCC--------------------CeEEcccCCcccCCCCCccccCCCcCCCcCCCCCC
Q 011092 173 YCT-SKGRALYHDLNAYRILFDEDG--------------------NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR 231 (494)
Q Consensus 173 ~lH-~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~~ 231 (494)
||| +++ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+..
T Consensus 176 ~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 176 VAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS
T ss_pred HHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC
Confidence 999 899 99999999999999887 8999999999876543 457899999999998666
Q ss_pred CCCCCCchhHHHH-HHHHHhCCCCCCCchh-HHhhhccccc-cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHH
Q 011092 232 VTPESVIYSFGTL-LLDLLSGKHIPPSHAL-DLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 308 (494)
Q Consensus 232 ~~~~sDv~slG~v-l~elltg~~p~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 308 (494)
+.++||||||++ .+++++|..||..... .......... ..........+..++.++.+||.+||+.| |+.+
T Consensus 254 -~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e 327 (336)
T 2vuw_A 254 -DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATD 327 (336)
T ss_dssp -SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHH
T ss_pred -ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHH
Confidence 889999998777 7778889887744211 0011111100 00111111123457889999999999976 8998
Q ss_pred HH
Q 011092 309 LV 310 (494)
Q Consensus 309 vl 310 (494)
++
T Consensus 328 ~l 329 (336)
T 2vuw_A 328 LL 329 (336)
T ss_dssp HH
T ss_pred HH
Confidence 88
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-33 Score=288.85 Aligned_cols=179 Identities=13% Similarity=0.098 Sum_probs=129.4
Q ss_pred cCCCCCCCeEEEEE-EcCCCEEEEEEecCCCCC----------ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcccee
Q 011092 67 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP----------DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv 134 (494)
+.+.|+.|.+..++ .-.|..|++|++...... ..++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 44667777776655 445889999999764321 135699999999999 799999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||++|++|.++|. ..++++.. .|+.||+.||+|+|++| ||||||||+||||+++|++||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999997 34567764 47899999999999999 999999999999999999999999999876543
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCC
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~ 252 (494)
.+..||+.|||||++.+ .+..++|+||+|++++++.++.
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 23568999999999985 5677899999999988877664
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-28 Score=251.28 Aligned_cols=176 Identities=13% Similarity=0.110 Sum_probs=143.8
Q ss_pred ccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCC--------hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 66 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.||+|+||.||+|.. .+..+++|+........ .++|.+|++++++++||||+++..++...+..+|||||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 4569999999999954 57889999875533222 23589999999999999999666666677788999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 212 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 212 (494)
++|++|.+++.. +..|+.||+.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 999999999952 5689999999999999999 999999999999998 9999999999987653
Q ss_pred ------CccccCCCcCCCcCCCC--CCCCCCCCchhHHHHHHHHHhCCCCC
Q 011092 213 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIP 255 (494)
Q Consensus 213 ------~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~p~ 255 (494)
....||+.|||||++.. ..|+..+|+||..+-.++-+.++.++
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 24568999999999986 45788899999999888888776543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-25 Score=211.41 Aligned_cols=167 Identities=16% Similarity=0.083 Sum_probs=127.5
Q ss_pred HHHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC------------------ChHHHHHHHHHHh
Q 011092 50 EQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP------------------DPRQFLEEARSVG 111 (494)
Q Consensus 50 ~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~ 111 (494)
-.+....++-..+.+.+.||.|+||.||+|...+|+.||||.++..... ....+.+|+.+++
T Consensus 80 ~~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~ 159 (282)
T 1zar_A 80 YSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQ 159 (282)
T ss_dssp HHHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHH
Confidence 3444444555556666888999999999999977999999999653211 1346889999999
Q ss_pred ccCCCCCccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCccccccccccee
Q 011092 112 QLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191 (494)
Q Consensus 112 ~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nil 191 (494)
+++ | +++.+++.. +..++||||++|++|.+ +.. .....++.||+.||.|||+.| |+||||||+|||
T Consensus 160 ~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NIL 225 (282)
T 1zar_A 160 KLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVL 225 (282)
T ss_dssp HTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEE
T ss_pred hcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEE
Confidence 999 4 555555433 56799999999999988 521 124579999999999999999 999999999999
Q ss_pred ecCCCCeEEcccCCcccCCCCCccccCCCcCCCcCCCC----------CCCCCCCCchh
Q 011092 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT----------GRVTPESVIYS 240 (494)
Q Consensus 192 l~~~~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~----------~~~~~~sDv~s 240 (494)
++ ++.+||+|||+++. +..++|||++.. ..+...+|+|.
T Consensus 226 l~-~~~vkl~DFG~a~~---------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE---------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EE-TTEEEECCCTTCEE---------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EE-CCcEEEEECCCCeE---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99 99999999999874 334688887753 23455566654
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=158.49 Aligned_cols=109 Identities=20% Similarity=0.254 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
++.++.++++|+.+++.|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++||+++|+++.+|+++|
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg 88 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKA 88 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 462 AALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 462 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+|..+|++++|+++|++|++++|++.++.
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~l~P~~~~a~ 118 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQVDPSNEEAR 118 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCcCCHHHH
Confidence 999999999999999999999999998765
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-21 Score=181.73 Aligned_cols=149 Identities=13% Similarity=0.075 Sum_probs=114.1
Q ss_pred HHHHHHHhcCCccccccccCCCCCCCeEEEEEE-cCCCE--EEEEEecCCCCCC------------------------hH
Q 011092 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRR--IAVKRFNRMAWPD------------------------PR 101 (494)
Q Consensus 49 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~ 101 (494)
...+....++-..+.+.+.||.|+||.||+|.. .+|+. ||||+++...... ..
T Consensus 36 ~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 36 LKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 334444445555677888899999999999996 78888 9999976432110 12
Q ss_pred HHHHHHHHHhccCCCCC--ccEEEEEecCCccceeeecCCC-C----CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH
Q 011092 102 QFLEEARSVGQLRNNRL--TNLLGCCCEGDERLLVAEYMPN-E----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC 174 (494)
Q Consensus 102 ~~~~E~~~l~~l~hpnI--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~l 174 (494)
.+.+|+.++.++.|++| +.++++ +..+|||||+.+ | +|.+.... .++.....++.||+.+|.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 57899999999988864 444443 356899999942 3 77776532 23456788999999999999
Q ss_pred H-hcCCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 175 T-SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 175 H-~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
| +.| |+||||||+|||++. .++|+|||++...
T Consensus 187 H~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 898 999999999999998 9999999998764
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=156.04 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------c-----HHHHhHHHHHHHhcCChHHHHHHHHHHHhh
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------S-----PTVYARRSLCYLMSDMPQDALNDAMQAQII 449 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l 449 (494)
.+..+..++.+|+.+++.|+|++|+..|++||+++|++ + ..+|+|+|.++..+|+|++|+.+|++||++
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999982 1 339999999999999999999999999999
Q ss_pred -------CCcchHHH----HHHHHHHHHCCChHHHHHHHHHhhccccccccccc
Q 011092 450 -------SPIWHIAS----YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 450 -------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
+|+++++| |++|.+|..+|++++|+.+|++|++++|++.....
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999 99999999999999999999999999999876543
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=148.69 Aligned_cols=109 Identities=6% Similarity=-0.100 Sum_probs=104.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.-...++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|+
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~ 108 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVF 108 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHH
Confidence 345678899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 459 LQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
++|.+|..+|++++|+.+|++|++++|...
T Consensus 109 ~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 109 HTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999998764
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=142.13 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc-------h
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------H 454 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~ 454 (494)
.+.+.++.++|+.++++|+|++|++.|++||+++|+ +..+|+++|.+|..+|+|++|+.+|++||+++|++ +
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 356789999999999999999999999999999999 89999999999999999999999999999999887 4
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 455 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 455 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
.+|+++|.++..+|++++|+++|++|++++|+.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 689999999999999999999999999988754
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-17 Score=137.32 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..++.+|..++..|+|++|+..|++||+++|+ ++.+|.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccc------cccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLE------AKKNST 490 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~------~~~~~a 490 (494)
++..+|++++|+.+|+++++++ |.+..+
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 9999999999999999999999 665543
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.74 E-value=7e-18 Score=146.00 Aligned_cols=108 Identities=24% Similarity=0.234 Sum_probs=102.3
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------------------CCCCcHHHHhHHHHHHHhcCChHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------------------GTMVSPTVYARRSLCYLMSDMPQDALN 441 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~ 441 (494)
+.+..+..+..+|+.+++.|+|++|+..|++||++ +|. ...+|+++|.||..+|+|++|+.
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHH
Confidence 44577889999999999999999999999999999 677 77899999999999999999999
Q ss_pred HHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 442 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 442 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999999987
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.6e-19 Score=170.90 Aligned_cols=149 Identities=13% Similarity=0.074 Sum_probs=107.3
Q ss_pred HHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC--------------ChHH--------HHHHHH
Q 011092 51 QLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--------------DPRQ--------FLEEAR 108 (494)
Q Consensus 51 ~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~~E~~ 108 (494)
-+....+.=..|.+.+.||.|++|.||+|...+|+.||||+++..... .... ..+|..
T Consensus 86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 344455555568889999999999999999888999999998642110 0111 134667
Q ss_pred HHhccCCCCCccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Q 011092 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188 (494)
Q Consensus 109 ~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~ 188 (494)
.|.++.+.++....-+.. ...+|||||++|++|..+.. . .....++.||+.+|.+||+.| ||||||||.
T Consensus 166 nL~rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~ 234 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHG-LIHGDFNEF 234 (397)
T ss_dssp HHHHHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTT
T ss_pred HHHHHHhcCCCCCeeeec--cCceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHH
Confidence 777775554432222211 23479999999998876542 1 123567899999999999999 999999999
Q ss_pred ceeecCCCC----------eEEcccCCcccCC
Q 011092 189 RILFDEDGN----------PRLSTFGLMKNSR 210 (494)
Q Consensus 189 Nill~~~~~----------~kl~Dfgla~~~~ 210 (494)
|||+++++. +.|+||+.+....
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 999987763 8899999876543
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=141.05 Aligned_cols=111 Identities=11% Similarity=0.090 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
......+..++..|..|++.|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|+
T Consensus 25 ~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 25 PSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp CSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHH
Confidence 345577889999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHH-HHHhhccccccccc
Q 011092 459 LQAAALSAMGMENEAQVA-LKEGTTLEAKKNST 490 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~-~~~al~l~~~~~~a 490 (494)
++|.+|..+|++++|.+. +++|++++|++..+
T Consensus 104 ~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~ 136 (150)
T 4ga2_A 104 KIAELLCKNDVTDGRAKYWVERAAKLFPGSPAV 136 (150)
T ss_dssp HHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHH
Confidence 999999999999988776 59999999998765
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.3e-17 Score=137.86 Aligned_cols=109 Identities=11% Similarity=0.013 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
....+...++..|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|++
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 94 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFH 94 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHH
Confidence 34577889999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+|.+|..+|++++|+.+|+++++++|.+..
T Consensus 95 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 124 (148)
T 2vgx_A 95 AAECLLQXGELAEAESGLFLAQELIANXPE 124 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCcCCCc
Confidence 999999999999999999999999998654
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.8e-17 Score=139.67 Aligned_cols=108 Identities=25% Similarity=0.292 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
..++..++.+|..++..|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 357889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 462 AALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 462 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
.+|..+|++++|+.+|+++++++|++..+
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 99999999999999999999999998764
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-16 Score=134.54 Aligned_cols=109 Identities=10% Similarity=0.061 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...+...++..|..++..|+|++|+..|++++.++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|+++
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 4567888999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|.+|..+|++++|+.+|+++++++|.+...
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 93 AECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 999999999999999999999999977643
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-16 Score=130.39 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 465 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 465 (494)
..++.+|..+++.|++++|+..|++|++++|+ +..+|+++|.++..+|++++|+..|++|++++|+++.+++++|.+|.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35688999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHhhcccccccc
Q 011092 466 AMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 466 ~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
.+|++++|+..|+++++++|....
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHC-------
T ss_pred HcCCHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999998753
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-15 Score=125.17 Aligned_cols=103 Identities=23% Similarity=0.377 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..++..|..++..|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+..+|++++|+..|+++++++|++
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHHChhH
Confidence 999999999999999999999983
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.63 E-value=9.2e-16 Score=138.59 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhH----------------HHHHHHhcCChHHHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYAR----------------RSLCYLMSDMPQDALNDAMQAQ 447 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~al 447 (494)
.+..++.+|..++..|+|++|+..|+++++++|+ ++.+|+. +|.+|..+|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3567788999999999999999999999999998 8888888 9999999999999999999999
Q ss_pred hhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 448 IISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 448 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..+.
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999887653
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-15 Score=160.87 Aligned_cols=113 Identities=17% Similarity=0.068 Sum_probs=103.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHH
Q 011092 378 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
..-....+.+++++|..+.+.|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|++.|++||+++|+++.+|
T Consensus 36 l~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 36 LEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 3334566889999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 458 YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 458 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+++|.+|..+|++++|+++|++|++++|++..+.
T Consensus 115 ~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 115 SNLASIHKDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999999999999887654
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=145.53 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=106.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---------------HHHHhHHHHHHHhcCChHHHHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDA 443 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~ 443 (494)
......+..++.+|..+++.|+|++|+..|++|++++|+ + ..+|+++|.+|.++|++++|+.+|
T Consensus 141 ~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 219 (336)
T 1p5q_A 141 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 219 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 446678999999999999999999999999999999999 5 689999999999999999999999
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 444 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 444 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+.
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 999999999999999999999999999999999999999999987653
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.7e-15 Score=132.66 Aligned_cols=113 Identities=19% Similarity=0.226 Sum_probs=106.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----------------HHHhHHHHHHHhcCChHHHHH
Q 011092 378 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----------------TVYARRSLCYLMSDMPQDALN 441 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~ 441 (494)
..+....+..+...|..++..|+|++|+..|++|+++.|. ++ .++.++|.+|..+|++++|+.
T Consensus 31 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 109 (198)
T 2fbn_A 31 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAID 109 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3456778899999999999999999999999999999998 55 899999999999999999999
Q ss_pred HHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 442 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 442 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+++++++++|+++.+++++|.+|..+|++++|+++|+++++++|++..+.
T Consensus 110 ~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 110 HASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 99999999999999999999999999999999999999999999887543
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.8e-16 Score=131.64 Aligned_cols=93 Identities=12% Similarity=0.049 Sum_probs=87.2
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCCh----------HHHHHHHHHHHhhCCcchHHHHHHHHHHHH
Q 011092 397 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP----------QDALNDAMQAQIISPIWHIASYLQAAALSA 466 (494)
Q Consensus 397 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 466 (494)
+.+.|++|++.|++|++++|+ ++.+|++.|.++..++++ ++|+..|++||+++|+++.+|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 567899999999999999999 999999999999999876 599999999999999999999999999998
Q ss_pred CC-----------ChHHHHHHHHHhhccccccccc
Q 011092 467 MG-----------MENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 467 ~~-----------~~~~A~~~~~~al~l~~~~~~a 490 (494)
+| ++++|+++|++|++++|++...
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHH
Confidence 85 8999999999999999997654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=151.52 Aligned_cols=112 Identities=15% Similarity=0.190 Sum_probs=102.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---------------HHHHhHHHHHHHhcCChHHHHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDA 443 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~ 443 (494)
......+..++.+|+.+++.|+|++|+..|++||+++|. + ..+|+|+|.||.++|+|++|+.+|
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 340 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 340 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 456678899999999999999999999999999999999 5 689999999999999999999999
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 444 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 444 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++||+++|+++.+|+++|.+|+.+|++++|+.+|++|++++|.+..+.
T Consensus 341 ~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 341 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=7.5e-15 Score=118.39 Aligned_cols=108 Identities=26% Similarity=0.370 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 35678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++..+|++++|+..|+++++++|.+..+.
T Consensus 81 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999876543
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=9e-15 Score=120.86 Aligned_cols=107 Identities=25% Similarity=0.312 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
....+++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 35678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
++..+|++++|+..|+++++++|.+..+
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 120 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEA 120 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHH
Confidence 9999999999999999999999987654
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=5.5e-16 Score=132.32 Aligned_cols=100 Identities=8% Similarity=-0.076 Sum_probs=92.7
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCCh
Q 011092 391 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGME 470 (494)
Q Consensus 391 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~ 470 (494)
+|..+..+|++++|+..|.+++..+|+ ++..++++|.+|..+|+|++|+..|++||+++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 578888999999999999999999999 8899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccccc
Q 011092 471 NEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 471 ~~A~~~~~~al~l~~~~~~a~ 491 (494)
++|+.+|++|++++|++..+.
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999987653
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4e-15 Score=158.33 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+.++.++|..+.++|+|++|++.|++||+++|+ +..+|+++|.+|.++|++++|++.|++||+++|+++.+|+++|.
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~ 85 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56778888888888888888888888888888888 78888888888888888888888888888888888888888888
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|..+|++++|+++|++|++++|++..+.
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 88888888888888888888888876553
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=2.3e-15 Score=148.68 Aligned_cols=114 Identities=9% Similarity=-0.040 Sum_probs=103.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH
Q 011092 377 MWTDQMQETLNSKKKGDVAFRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 455 (494)
...........|+.+|..+...|+ |++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++||+++|+++.
T Consensus 123 al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~ 201 (382)
T 2h6f_A 123 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYH 201 (382)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHH
T ss_pred HHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHH
Confidence 334455678899999999999996 99999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 456 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 456 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|+++|.++..+|++++|+.+|++||+++|.+..++
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999987764
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.1e-15 Score=134.63 Aligned_cols=107 Identities=13% Similarity=0.148 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.++..++.+|..+++.|+|++|+..|+++|+++|+ ++.+++++|.++..+|++++|+..++++++++|+++.+|+++|.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34568899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHC-----------CChHHHHHHHHHhhccccccccc
Q 011092 463 ALSAM-----------GMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 463 ~~~~~-----------~~~~~A~~~~~~al~l~~~~~~a 490 (494)
++..+ |++++|+..|++|++++|++..+
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~ 120 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPL 120 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHH
Confidence 99999 99999999999999999998754
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=126.75 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.....+...|..+...++++.|+..+.++++++|+ +..++..+|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~ 149 (184)
T 3vtx_A 71 TSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGL 149 (184)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHH
Confidence 34567888999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+|..+|++++|+.+|++|++++|++..
T Consensus 150 ~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 150 AYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 999999999999999999999998753
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=118.95 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH---HHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc---hHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYL 459 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~ 459 (494)
..++..|..++..|+|++|+..|+++++.+|+ +. .+++++|.+|..+|++++|+..|+++++++|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 46789999999999999999999999999999 66 789999999999999999999999999999999 899999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|.++..+|++++|+..|+++++.+|++..+
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 9999999999999999999999999987654
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-14 Score=122.66 Aligned_cols=110 Identities=24% Similarity=0.308 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
.....+..++..|..++..|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 34567889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|.++..+|++++|+..|+++++++|++..+
T Consensus 87 ~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 117 (166)
T 1a17_A 87 RAASNMALGKFRAALRDYETVVKVKPHDKDA 117 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999999999987654
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=121.37 Aligned_cols=107 Identities=22% Similarity=0.238 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
.+..++..|..++..|+|++|+..|+++++++|+ + ..++.++|.+|..+|++++|+..++++++++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 4567889999999999999999999999999998 6 88999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
|.++..+|++++|+..|+++++++|++..++
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 9999999999999999999999999886543
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=137.41 Aligned_cols=105 Identities=23% Similarity=0.364 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..++.+|..++..|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3568899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
|..+|++++|+..|++|++++|++..
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~ 107 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRL 107 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchh
Confidence 99999999999999999999998753
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=7.4e-15 Score=145.05 Aligned_cols=111 Identities=10% Similarity=-0.079 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCC-hHHHHHHHHHHHhhCCcchHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.....+..+..+|..+...|+|++|++.|++||+++|+ +..+|+++|.+|..+|+ +++|+.+|++||+++|+++.+|+
T Consensus 92 ~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~ 170 (382)
T 2h6f_A 92 YSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWH 170 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 44577889999999999999999999999999999999 99999999999999997 99999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 459 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++|.++..+|++++|+.+|++||+++|++..++
T Consensus 171 ~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 171 HRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 999999999999999999999999999988764
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.5e-15 Score=143.42 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH-----------------HHHhHHHHHHHhcCChHHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP-----------------TVYARRSLCYLMSDMPQDALN 441 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~ 441 (494)
.+....+..++.+|+.+++.|+|++|+..|++|++++|+ +. .+|+++|.||.++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 456778899999999999999999999999999999998 55 389999999999999999999
Q ss_pred HHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccccc
Q 011092 442 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 442 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
+|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|.+..+..
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999887653
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-14 Score=143.70 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=105.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh----------------cCCCCcHHHHhHHHHHHHhcCChHHHHH
Q 011092 378 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID----------------AGTMVSPTVYARRSLCYLMSDMPQDALN 441 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~ 441 (494)
.......+..++.+|+.+++.|+|++|++.|++||+ ++|. ...+|+++|.+|.++|+|++|+.
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 345567788999999999999999999999999999 7777 88999999999999999999999
Q ss_pred HHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 442 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 442 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|.+..+.
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~ 344 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 344 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999877543
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=5e-14 Score=115.65 Aligned_cols=109 Identities=19% Similarity=0.254 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 4567889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|.++..+|++++|+..|+++++++|++..+
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 116 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETY 116 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHH
Confidence 999999999999999999999999987654
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=128.63 Aligned_cols=108 Identities=8% Similarity=-0.056 Sum_probs=97.5
Q ss_pred hHHHHHHHHHH----------------HHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHH
Q 011092 380 DQMQETLNSKK----------------KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDA 443 (494)
Q Consensus 380 ~~~~~~~~~~~----------------~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 443 (494)
....++..++. +|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|
T Consensus 33 ~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~ 111 (208)
T 3urz_A 33 LNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMY 111 (208)
T ss_dssp HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred hCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34556667777 999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHC-----------------------------------CChHHHHHHHHHhhccccccc
Q 011092 444 MQAQIISPIWHIASYLQAAALSAM-----------------------------------GMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 444 ~~al~l~p~~~~a~~~~g~~~~~~-----------------------------------~~~~~A~~~~~~al~l~~~~~ 488 (494)
+++++++|+++.+|+++|.+|+.+ |+|++|+.+|++|++++|+..
T Consensus 112 ~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 112 EKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999888876433 468999999999999999753
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-14 Score=113.19 Aligned_cols=103 Identities=12% Similarity=0.072 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCc--chHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI--WHIASYLQAA 462 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g~ 462 (494)
+..++.+|..++..|+|++|+..|+++++++|. +..++.++|.+|..+|++++|+..++++++++|+ ++.+++++|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 456788899999999999999999999999999 8999999999999999999999999999999999 9999999999
Q ss_pred HHHHC-CChHHHHHHHHHhhccccccc
Q 011092 463 ALSAM-GMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 463 ~~~~~-~~~~~A~~~~~~al~l~~~~~ 488 (494)
++..+ |++++|+++|+++++.+|...
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999998754
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.2e-14 Score=129.19 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
++..++.+|..++..|+|++|+..|+++++++| . +..+++++|.+|..+|++++|+..|++|++++|+++.+|+.+|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 347899999999999999999999999999998 6 77888889999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+|..+|++++|+..|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999876
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2e-14 Score=130.59 Aligned_cols=102 Identities=14% Similarity=0.005 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc
Q 011092 385 TLNSKKKGDVAFRQ-----------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 453 (494)
Q Consensus 385 ~~~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~ 453 (494)
+..++.+|..+... |++++|+..|++|++++|+ +..++.++|.+|..+|++++|+..|++|++++ ++
T Consensus 73 ~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~ 150 (217)
T 2pl2_A 73 LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-DT 150 (217)
T ss_dssp HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc
Confidence 44455555555555 5555555555555555555 45555555555555555555555555555555 55
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 454 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 454 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+.+++++|.+|..+|++++|+..|+++++++|.+.
T Consensus 151 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 185 (217)
T 2pl2_A 151 PEIRSALAELYLSMGRLDEALAQYAKALEQAPKDL 185 (217)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 55555555555555555555555555555555544
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=113.47 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc-------hH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HI 455 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 455 (494)
+.+..++..|..++..|+|++|+..|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 35678999999999999999999999999999999 89999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 456 ASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 456 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
+++++|.++..+|++++|++.|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999884
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=121.68 Aligned_cols=109 Identities=19% Similarity=0.180 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...++..+..+|..++..|++++|+..+.+++..+|+ ...++.+.+.++...++++.|+..++++++++|++..+++.+
T Consensus 35 ~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~l 113 (184)
T 3vtx_A 35 DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKL 113 (184)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3455666677777777777777777777777777776 666677777777777777777777777778888888888888
Q ss_pred HHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|.+|..+|++++|++.|+++++++|.+..+
T Consensus 114 g~~~~~~g~~~~A~~~~~~~l~~~p~~~~~ 143 (184)
T 3vtx_A 114 GLVYDSMGEHDKAIEAYEKTISIKPGFIRA 143 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHhCCchhHHHHHHHHHHhcchhhhH
Confidence 888888888888888888888888877654
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-14 Score=118.46 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=84.0
Q ss_pred HhcCHHHHHHHHHHHHhc---CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHH
Q 011092 397 RQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 473 (494)
Q Consensus 397 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 473 (494)
..|+|++|+..|++|+++ +|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 588 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccc
Q 011092 474 QVALKEGTTLEAKKNST 490 (494)
Q Consensus 474 ~~~~~~al~l~~~~~~a 490 (494)
+..|+++++++|.+...
T Consensus 81 ~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 81 VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHhCCCcHHH
Confidence 99999999999987653
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=125.34 Aligned_cols=107 Identities=18% Similarity=0.162 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch-------H
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 455 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 455 (494)
.+...++.+|..++..|+|++|++.|++|++++|+ +..++.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 34567888999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhccccc--cccc
Q 011092 456 ASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNST 490 (494)
Q Consensus 456 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~--~~~a 490 (494)
+|+++|.++..+|++++|+..|++|++++|+ +..+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 155 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDA 155 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHH
Confidence 7999999999999999999999999999998 5543
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.8e-13 Score=109.30 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..++..|..++..|++++|++.|+++++.+|+ +..++.+++.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3567899999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+..+|++++|+..|+++++++|.+..+
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~~~ 113 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALELDPNNAEA 113 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcHHH
Confidence 999999999999999999999987654
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.9e-13 Score=121.91 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch---------
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--------- 454 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 454 (494)
.+..++.+|..++..|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|+..|++++++.|++.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 3568999999999999999999999999999999 899999999999999999999999999999888776
Q ss_pred -------HHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 455 -------IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 455 -------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
.+++++|.++..+|++++|+..|+++++++|++..
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999999999997654
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-13 Score=118.46 Aligned_cols=106 Identities=14% Similarity=0.073 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHH-HHhcCCh--HHHHHHHHHHHhhCCcchHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMP--QDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
.++..++..|..++..|+|++|+..|+++++++|+ +..++.++|.+ |...|++ ++|+..++++++++|+++.+++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHH
Confidence 45678999999999999999999999999999999 89999999999 8899999 99999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+|.++..+|++++|+..|+++++++|.+..
T Consensus 121 la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 121 LASDAFMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCcc
Confidence 999999999999999999999999998764
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-14 Score=114.77 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc------hHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------HIAS 457 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~ 457 (494)
++..++.+|..++..|+|++|++.|++|++++|+ ++.+++++|.+|..+|++++|+..++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 5678999999999999999999999999999999 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHh
Q 011092 458 YLQAAALSAMGMENEAQVALKEG 480 (494)
Q Consensus 458 ~~~g~~~~~~~~~~~A~~~~~~a 480 (494)
+++|.++..+|++++|+..|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999988877653
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=4.3e-14 Score=144.13 Aligned_cols=109 Identities=24% Similarity=0.310 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
.+.+..++.+|..+++.|+|++|++.|++|++++|+ +..+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 81 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 81 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356778899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 462 AALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 462 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+|..+|++++|++.|++|++++|++..+.
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999887653
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-13 Score=128.72 Aligned_cols=137 Identities=12% Similarity=0.002 Sum_probs=108.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccceeeecCCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
+.+...++.|+.+.||+.... +..+++|............+.+|+.+++.+ .|.+++++++++...+..|+||||++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 345555577888999999854 679999998753223345688999999999 477889999999988889999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-------------------------------------------- 176 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-------------------------------------------- 176 (494)
.+|.+.+. +......++.+++.+|..||+
T Consensus 95 ~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 95 VLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred eehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 99987642 112234678899999999998
Q ss_pred ---------------cCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 177 ---------------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 177 ---------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
.. ++|+|++|.|||+++++.+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 33 8899999999999876666799999764
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6e-14 Score=119.48 Aligned_cols=91 Identities=8% Similarity=-0.206 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHH
Q 011092 400 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479 (494)
Q Consensus 400 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 479 (494)
++-.+-..|.++++++|+ +..+++++|.++..+|++++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|++
T Consensus 17 ~~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAV 95 (151)
T ss_dssp HHHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 333344678899999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccc
Q 011092 480 GTTLEAKKNSTA 491 (494)
Q Consensus 480 al~l~~~~~~a~ 491 (494)
|++++|++..+.
T Consensus 96 al~l~P~~~~~~ 107 (151)
T 3gyz_A 96 AFALGKNDYTPV 107 (151)
T ss_dssp HHHHSSSCCHHH
T ss_pred HHhhCCCCcHHH
Confidence 999999987654
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-13 Score=146.27 Aligned_cols=109 Identities=12% Similarity=-0.092 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...++..++.+|..++..|+|++|++.|++|++++|+ +..+|+++|.+|..+|++++ +..|++|++++|+++.+|+++
T Consensus 463 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~l 540 (681)
T 2pzi_A 463 VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGL 540 (681)
T ss_dssp HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHH
Confidence 3456789999999999999999999999999999999 89999999999999999999 999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
|.+|..+|++++|+++|++|++++|.+..+.
T Consensus 541 g~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 541 ARARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 9999999999999999999999999987654
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-12 Score=121.04 Aligned_cols=107 Identities=13% Similarity=0.001 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..++.+|..++..|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 117 (275)
T 1xnf_A 39 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNR 117 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHH
Confidence 3467889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
|.+|..+|++++|+..|+++++++|++.
T Consensus 118 a~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 118 GIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999875
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=117.00 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.++..++.+|..++..|+|++|+..|++++ +| ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 466788999999999999999999999996 44 57899999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+|..+|++++|+..|++++++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999988765
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-12 Score=119.70 Aligned_cols=110 Identities=18% Similarity=0.179 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
.....+..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+|+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 212 (258)
T 3uq3_A 134 VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIR 212 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 34567889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccc------cccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLE------AKKNST 490 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~------~~~~~a 490 (494)
+|.++..+|++++|+..|+++++++ |.+...
T Consensus 213 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~ 249 (258)
T 3uq3_A 213 KATAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 249 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHH
Confidence 9999999999999999999999999 665543
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=121.07 Aligned_cols=107 Identities=13% Similarity=0.015 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCc---chHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI---WHIA 456 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~---~~~a 456 (494)
.++..++.+|..+++.|+|++|+..|+++++.+|+ + ..+++++|.+|..+|++++|+..|+++++++|+ .+.+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 34678999999999999999999999999999999 6 889999999999999999999999999999885 4789
Q ss_pred HHHHHHHHHH--------CCChHHHHHHHHHhhccccccccc
Q 011092 457 SYLQAAALSA--------MGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 457 ~~~~g~~~~~--------~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
++.+|.++.. +|++++|+..|+++++++|++..+
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 133 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELV 133 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhH
Confidence 9999999999 999999999999999999987654
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.9e-12 Score=104.49 Aligned_cols=87 Identities=16% Similarity=0.137 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhh
Q 011092 402 KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 481 (494)
Q Consensus 402 ~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 481 (494)
++|++.|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3689999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 011092 482 TLEAKKNS 489 (494)
Q Consensus 482 ~l~~~~~~ 489 (494)
+++|....
T Consensus 81 ~~~~~~~~ 88 (115)
T 2kat_A 81 AAAQSRGD 88 (115)
T ss_dssp HHHHHHTC
T ss_pred Hhcccccc
Confidence 99987654
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.37 E-value=3.1e-12 Score=116.69 Aligned_cols=107 Identities=9% Similarity=-0.035 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc--HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH---HHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---ASY 458 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~---a~~ 458 (494)
.+..++.+|..+++.|+|++|+..|+++++..|++. ..+++++|.+|..+|++++|+..|+++++++|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 356789999999999999999999999999999832 468999999999999999999999999999999875 899
Q ss_pred HHHHHHHH------------------CCChHHHHHHHHHhhccccccccc
Q 011092 459 LQAAALSA------------------MGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 459 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
.+|.++.. +|++++|+..|+++++.+|++..+
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a 132 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYT 132 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTH
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhH
Confidence 99999986 679999999999999999998754
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.2e-12 Score=106.25 Aligned_cols=86 Identities=12% Similarity=0.066 Sum_probs=80.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHH
Q 011092 378 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
......++..+..+|..++..|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++
T Consensus 40 l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~ 118 (126)
T 4gco_A 40 VKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAR 118 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHH
Confidence 3344567889999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 011092 458 YLQAAAL 464 (494)
Q Consensus 458 ~~~g~~~ 464 (494)
..++.++
T Consensus 119 ~~l~~~l 125 (126)
T 4gco_A 119 EGVRNCL 125 (126)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999875
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.6e-12 Score=125.93 Aligned_cols=107 Identities=14% Similarity=0.034 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
++..++.+|..+++.|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
|..+|++++|+..|+++++++|++..+.
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred HHccccHHHHHHHHHHHHHhCccchHHH
Confidence 9999999999999999999999876543
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-12 Score=101.72 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHH-HHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH
Q 011092 388 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 466 (494)
Q Consensus 388 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 466 (494)
.+.+|..++..|+|++|+..|+++++.+|+ +.. +++++|.+|..+|++++|+..|+++++++|+++.++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 467899999999999999999999999999 888 99999999999999999999999999999999999866
Q ss_pred CCChHHHHHHHHHhhccccccccc
Q 011092 467 MGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 467 ~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+.+.+|+..|+++++++|.+...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred -HHHHHHHHHHHHHhccCcccccC
Confidence 77899999999999999987654
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-11 Score=101.88 Aligned_cols=103 Identities=18% Similarity=0.185 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+...+...|..++..|++++|+..|+++++.+|. ...++.+++.++...|++++|+..++++++++|.+..+++.+|.+
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4567888999999999999999999999999999 888999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+..+|++++|+..|+++++++|.+
T Consensus 113 ~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 113 YYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999998863
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.36 E-value=7e-12 Score=102.97 Aligned_cols=103 Identities=18% Similarity=0.182 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 465 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 465 (494)
..++..|..++..|++++|+..|+++++.+|+ +...+.+++.++...|++++|+..++++++++|+++.+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHhhcccccccc
Q 011092 466 AMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 466 ~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
..|++++|++.|+++++++|.+..
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~ 104 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAE 104 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChH
Confidence 999999999999999999887653
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=133.74 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
+..+..+|..++..|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|++.++++++++|+++.+++++|.++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 344444444444455555555555555555444 4444444445555555555555555555555555444555555555
Q ss_pred HHC---CChHHHHHHHHHhhcccccc
Q 011092 465 SAM---GMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 465 ~~~---~~~~~A~~~~~~al~l~~~~ 487 (494)
..+ |++++|++.|+++++++|..
T Consensus 136 ~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 136 RRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHhhccccHHHHHHHHHHHHhcCCcc
Confidence 444 44555555555555444443
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.3e-11 Score=107.58 Aligned_cols=107 Identities=14% Similarity=0.054 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.+...+...|..++..|++++|++.|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 152 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAF 152 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 34667889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
++..+|++++|+..|+++++++|++..+
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 153 SYEQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 9999999999999999999999987654
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.9e-12 Score=123.31 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
++..+..+|..+...|+|++|++.|+++++++|+ +..+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
|..+|++++|+..|++|++++|+..
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999854
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.6e-12 Score=121.81 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
++..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 5678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccc---cccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEA---KKNS 489 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~---~~~~ 489 (494)
+..+|++++|+..|+++++++| ++..
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 109 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKE 109 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHH
Confidence 9999999999999999999999 5543
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.7e-12 Score=130.94 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHh---------cCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhc--------CChHHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQ---------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS--------DMPQDALNDAMQAQ 447 (494)
Q Consensus 385 ~~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~al 447 (494)
...+..+|..+... |+|++|++.|++|++++|+ +..+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 57889999999999 9999999999999999999 899999999999999 99999999999999
Q ss_pred hhCC---cchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 448 IISP---IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 448 ~l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+++| +++.+|+++|.+|..+|++++|++.|++|++++|++..+.
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999 9999999999999999999999999999999999987653
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-11 Score=126.30 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
+.+.+..++.+|..+++.|+|++|+..|+++++.+|+ ..+|.++|.+|..+|++++|+..++++++++|+++.+|+.+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 79 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRR 79 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHH
Confidence 4567899999999999999999999999999999985 78899999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
|.+|..+|++++|+..|+++++++|.+..
T Consensus 80 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 80 ASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999985543
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-11 Score=93.67 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..++..|..++..|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCC
Q 011092 463 ALSAMG 468 (494)
Q Consensus 463 ~~~~~~ 468 (494)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998765
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=113.75 Aligned_cols=105 Identities=11% Similarity=0.002 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHh--hCCcchHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI--ISPIWHIASYLQ 460 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~ 460 (494)
..+..+...|..++..|++++|++.|+++++.+|+ +..++.+++.+|..+|++++|+..++++++ .+|.++.+++.+
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 147 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENL 147 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHH
Confidence 34567777777777778888888888887777777 677777777777777777777777777777 777777777777
Q ss_pred HHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
|.++..+|++++|+..|+++++++|.+.
T Consensus 148 a~~~~~~g~~~~A~~~~~~~~~~~~~~~ 175 (252)
T 2ho1_A 148 GLVSLQMKKPAQAKEYFEKSLRLNRNQP 175 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCcccH
Confidence 7777777777777777777777777654
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.7e-12 Score=109.33 Aligned_cols=110 Identities=12% Similarity=-0.030 Sum_probs=92.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHH-HHhcCChHHHHHHHHHHHhhCCcchH
Q 011092 377 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMPQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~al~l~p~~~~ 455 (494)
.......++..++..|..+...|++++|+..|+++++.+| ++.++...+.+ +...+...+|+..++++++++|+++.
T Consensus 32 al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~ 109 (176)
T 2r5s_A 32 LSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFE 109 (176)
T ss_dssp SCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHH
T ss_pred HHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHH
Confidence 3445667788999999999999999999999999999999 34455444433 33334445689999999999999999
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 456 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 456 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+++++|.++..+|++++|+..|+++++++|...
T Consensus 110 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 110 LACELAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 999999999999999999999999999999764
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=117.70 Aligned_cols=105 Identities=11% Similarity=-0.068 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.++.+++.+|..+.+.|++++|+..|++++..+|+ ......+.+..+...++.++|+..++++++++|+++.+++++|.
T Consensus 149 ~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~ 227 (287)
T 3qou_A 149 QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLAL 227 (287)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHH
Confidence 34445555555555555555555555555555554 44444444444555555555677778888999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+|...|++++|+..|+++++++|...
T Consensus 228 ~l~~~g~~~~A~~~l~~~l~~~p~~~ 253 (287)
T 3qou_A 228 QLHQVGRNEEALELLFGHLRXDLTAA 253 (287)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTGG
T ss_pred HHHHcccHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999883
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=113.17 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+...+...|..++..|++++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 56 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 134 (243)
T 2q7f_A 56 DAIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTV 134 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455555566666666666666666666666665 555555666666666666666666666666666666666666666
Q ss_pred HHHCCChHHHHHHHHHhhcccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+..+|++++|+..|+++++++|.+
T Consensus 135 ~~~~~~~~~A~~~~~~~~~~~~~~ 158 (243)
T 2q7f_A 135 LVKLEQPKLALPYLQRAVELNEND 158 (243)
T ss_dssp HHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHhccHHHHHHHHHHHHHhCCcc
Confidence 666666666666666666555544
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-11 Score=106.20 Aligned_cols=105 Identities=14% Similarity=0.095 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+...+...|..++..|++++|+..|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 119 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVA 119 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHH
Confidence 3567889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+..+|++++|+..|+++++++|.+..
T Consensus 120 ~~~~~~~~~A~~~~~~~~~~~~~~~~ 145 (186)
T 3as5_A 120 LDNLGRFDEAIDSFKIALGLRPNEGK 145 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHcCcHHHHHHHHHHHHhcCccchH
Confidence 99999999999999999999987654
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-12 Score=109.81 Aligned_cols=87 Identities=10% Similarity=-0.069 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhc
Q 011092 403 DAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 482 (494)
Q Consensus 403 ~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 482 (494)
.+-..|.++++++|+ +...++++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|++|++
T Consensus 5 ~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 5 SGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp -CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 344568999999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 011092 483 LEAKKNST 490 (494)
Q Consensus 483 l~~~~~~a 490 (494)
++|++..+
T Consensus 84 l~p~~~~~ 91 (148)
T 2vgx_A 84 MDIXEPRF 91 (148)
T ss_dssp HSTTCTHH
T ss_pred cCCCCchH
Confidence 99998764
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-11 Score=120.36 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
+..++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhcccccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
..+|++++|+..|+++++++|.+..+.
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 999999999999999999999887654
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.7e-12 Score=129.83 Aligned_cols=107 Identities=9% Similarity=-0.037 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDL-KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
..+..++.+|..++..|+| ++|++.|++|++++|+ +..+|+++|.+|..+|++++|+..|++|++++|+ +.+++++|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHH
Confidence 4577899999999999999 9999999999999999 8999999999999999999999999999999999 79999999
Q ss_pred HHHHHC---------CChHHHHHHHHHhhcccccccccc
Q 011092 462 AALSAM---------GMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 462 ~~~~~~---------~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+|..+ |++++|++.|++|++++|++..++
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999 999999999999999999986543
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-11 Score=112.35 Aligned_cols=107 Identities=12% Similarity=0.057 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+...+...|..++..|++++|+..|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 202 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVT 202 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4567889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+..+|++++|+..|+++++++|++..+.
T Consensus 203 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 203 YAYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHccCcchHHHH
Confidence 9999999999999999999999887643
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7.2e-12 Score=98.50 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=63.0
Q ss_pred cCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 414 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 414 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
.+|+ ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|++|++++|+....
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 4677 788888888888888888888888888888888888888888888888888888888888888888776543
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.7e-11 Score=123.34 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
....++..++.+|..+++.|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+++.
T Consensus 21 ~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 99 (450)
T 2y4t_A 21 QSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQ 99 (450)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34467889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+|.+|..+|++++|+..|+++++++|.+.
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999999875
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-11 Score=117.49 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCCc-----HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH-
Q 011092 383 QETLNSKKKGDVAFRQ-KDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI- 455 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~- 455 (494)
..+..+.+.|..+... |+|++|+.+|++|+++.|... ..++.++|.+|..+|+|++|+..|+++++++|++..
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 3467899999999996 999999999999999987621 467999999999999999999999999999998753
Q ss_pred ------HHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 456 ------ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 456 ------a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|+++|.++..+|++++|+.+|+++++++|....+
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987654
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=114.82 Aligned_cols=104 Identities=14% Similarity=0.114 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhHHHHHHHh--------cCChHHHHHHHHHHHhhCCcch
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLM--------SDMPQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~al~l~p~~~ 454 (494)
..+++.+|..+++.|+|++|+..|++++++.|++ ...+++++|.+|.. +|++++|+..|+++++++|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 6789999999999999999999999999998862 46789999999999 9999999999999999999997
Q ss_pred HHH-----------------HHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 455 IAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 455 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
.++ +.+|.+|..+|++++|+..|+++++.+|++.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 766 9999999999999999999999999999854
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.9e-11 Score=119.53 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..+..+|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+++++|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
|..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.28 E-value=7.1e-12 Score=116.99 Aligned_cols=127 Identities=13% Similarity=0.077 Sum_probs=97.1
Q ss_pred CCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCC--CccEEEEEecCCccceeeecCCCCCHHHH
Q 011092 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR--LTNLLGCCCEGDERLLVAEYMPNETLAKH 146 (494)
Q Consensus 69 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 146 (494)
+.|..+.||+....+|..+++|..... ....+.+|+.+++.+.+.+ ++++++++..++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 466679999998777888999997654 2356789999999995444 566899888877889999999998884
Q ss_pred hcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------------
Q 011092 147 LFHWETHPMKWAMRLRVVLHLAQALEYCTSKG------------------------------------------------ 178 (494)
Q Consensus 147 l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~------------------------------------------------ 178 (494)
.. . .+ ...++.+++..|..||+..
T Consensus 104 ~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 21 1 12 2256677777778877632
Q ss_pred ---------CcccccccccceeecCCCCeEEcccCCccc
Q 011092 179 ---------RALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 179 ---------~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
.++|+|++|.|||+++++.+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 189999999999998776677999998653
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=2e-11 Score=112.69 Aligned_cols=105 Identities=15% Similarity=0.067 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh--------------------------cCCCCcHHHHhHHHHHHHhcCChHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFID--------------------------AGTMVSPTVYARRSLCYLMSDMPQD 438 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------------------------~~p~~~~~~~~~~~~~~~~~~~~~~ 438 (494)
+..+..+|..+...|++++|++.|+++++ .+|. ...++.++|.+|...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 56777888888888888888888888887 6777 78899999999999999999
Q ss_pred HHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 439 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 439 A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|+..++++++++|+++.+|+++|.++..+|++++|+..|+++++++|.+..+
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 209 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRA 209 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHH
Confidence 9999999999999999999999999999999999999999999999987654
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.2e-11 Score=127.57 Aligned_cols=109 Identities=21% Similarity=0.306 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
.....+..++.+|..+++.|+|++|++.|+++++.+|+ ++.++.++|.+|..+|++++|+..|+++++++|+++.+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34567899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|.++..+|++++|+..|+ ++.++|....+
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~ 128 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFDGA 128 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC--------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCChH
Confidence 9999999999999999996 99998886654
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.28 E-value=8e-12 Score=116.77 Aligned_cols=102 Identities=5% Similarity=-0.112 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC---CcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..+|..++..|+|++|++.|+++++ .|. ....+|.++|.+|..+|++++|+..++++++++|+++.+|+.+|.
T Consensus 38 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 116 (272)
T 3u4t_A 38 YIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGS 116 (272)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 3455555555555555555555555555 222 112235555555555555555555555555555555555555555
Q ss_pred HHHHCCChHHHHHHHHHhhccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
++..+|++++|+..|+++++++|.+.
T Consensus 117 ~~~~~~~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 117 YFYNKGNFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp HHHHTTCHHHHHHHHGGGCCSSCCCH
T ss_pred HHHHccCHHHHHHHHHHHhhcCCCcH
Confidence 55555555555555555555555443
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-11 Score=114.83 Aligned_cols=101 Identities=12% Similarity=0.007 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 466 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 466 (494)
.+..+|..+...|+|++|++.|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+|+++|...+.
T Consensus 76 ~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 76 DFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 4556666666666666666666666666666 556666666666666666666666666666666666666666633333
Q ss_pred CCChHHHHHHHHHhhccccccc
Q 011092 467 MGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 467 ~~~~~~A~~~~~~al~l~~~~~ 488 (494)
.+++++|++.|+++++++|++.
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~ 176 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIY 176 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHHHHhCccch
Confidence 4466666666666666666543
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.1e-11 Score=120.51 Aligned_cols=107 Identities=13% Similarity=0.060 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..+...|..+.+.|++++|++.|+++++++|+ +...+.+++.+|...|++++|+..++++++++|+++.+++++|.
T Consensus 269 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 347 (388)
T 1w3b_A 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 34567888999999999999999999999999998 88889999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|..+|++++|+..|+++++++|++..+
T Consensus 348 ~~~~~g~~~~A~~~~~~a~~~~p~~~~a 375 (388)
T 1w3b_A 348 VLQQQGKLQEALMHYKEAIRISPTFADA 375 (388)
T ss_dssp HHHTTTCCHHHHHHHHHHHTTCTTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHH
Confidence 9999999999999999999999987654
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=122.04 Aligned_cols=102 Identities=13% Similarity=0.011 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 465 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 465 (494)
..+..+|..+...|++++|++.|+++++++|+ ...++.+++.++..+|++++|+..|+++++++|+++.+|+++|.++.
T Consensus 102 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 180 (388)
T 1w3b_A 102 DGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFN 180 (388)
T ss_dssp HHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34555555555555555555555555555555 55555555555555566666666666666666666666666666666
Q ss_pred HCCChHHHHHHHHHhhccccccc
Q 011092 466 AMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 466 ~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
..|++++|+..|+++++++|.+.
T Consensus 181 ~~g~~~~A~~~~~~al~~~p~~~ 203 (388)
T 1w3b_A 181 AQGEIWLAIHHFEKAVTLDPNFL 203 (388)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHhcCCCcH
Confidence 66666666666666666655544
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.2e-11 Score=107.39 Aligned_cols=106 Identities=14% Similarity=0.058 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhc-CChHHHHHHHHHHHh--hCCcchHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-DMPQDALNDAMQAQI--ISPIWHIASYL 459 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~--l~p~~~~a~~~ 459 (494)
.....+...|..+...|++++|++.|+++++.+|+ +..++.+++.+|... |++++|+..++++++ .+|.+..+++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 44678888899999999999999999999999998 788888899999999 999999999999998 67777889999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 460 QAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 460 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+|.++..+|++++|+..|+++++++|.+..
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 148 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQFPP 148 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCch
Confidence 999999999999999999999988887654
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.3e-11 Score=118.20 Aligned_cols=100 Identities=11% Similarity=-0.007 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..+.++|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..+++++|.
T Consensus 194 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~ 272 (336)
T 1p5q_A 194 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAV 272 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 34678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHH-HHHHHHhhcc
Q 011092 463 ALSAMGMENEA-QVALKEGTTL 483 (494)
Q Consensus 463 ~~~~~~~~~~A-~~~~~~al~l 483 (494)
++..+|++++| ...|++.+..
T Consensus 273 ~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 273 CQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 5567776644
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=6.2e-11 Score=114.89 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----HHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.........|..++..|++++|+..|+++++.+|+ +. .++.++|.+|..+|++++|+..++++++++|+++.+|+
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 310 (359)
T 3ieg_A 232 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALK 310 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34455667799999999999999999999999999 65 34667899999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 459 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+|.++..+|++++|+..|+++++++|++..+.
T Consensus 311 ~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 311 DRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 999999999999999999999999999987653
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.1e-11 Score=118.34 Aligned_cols=158 Identities=14% Similarity=0.168 Sum_probs=114.5
Q ss_pred ccCHHHHHHHh----cCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEec--CCC-CCChHHHHHHHHHHhccC--CC
Q 011092 46 EFTLEQLKNAT----SGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFN--RMA-WPDPRQFLEEARSVGQLR--NN 116 (494)
Q Consensus 46 ~~~~~~~~~~~----~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--hp 116 (494)
.++...+.... .++.....+..++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +.
T Consensus 20 ~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~v 98 (359)
T 3dxp_A 20 RFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDV 98 (359)
T ss_dssp CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSS
T ss_pred CCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCC
Confidence 45555554442 233334456778999999999988754 678888876 332 122456889999999996 45
Q ss_pred CCccEEEEEecC---CccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc----------------
Q 011092 117 RLTNLLGCCCEG---DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---------------- 177 (494)
Q Consensus 117 nIv~l~~~~~~~---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------------- 177 (494)
.+++++.++.+. +..|+||||++|.++.+.. ...++...+..++.+++..|..||+.
T Consensus 99 pvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~ 174 (359)
T 3dxp_A 99 PVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNY 174 (359)
T ss_dssp CCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCH
T ss_pred CCCcEEEECCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCc
Confidence 688999998776 4479999999998875422 23478888899999999999999972
Q ss_pred -----------------------------------------CCcccccccccceeecCCCC--eEEcccCCccc
Q 011092 178 -----------------------------------------GRALYHDLNAYRILFDEDGN--PRLSTFGLMKN 208 (494)
Q Consensus 178 -----------------------------------------~~ivH~Dlkp~Nill~~~~~--~kl~Dfgla~~ 208 (494)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 175 FQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 12899999999999997653 68999998764
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-11 Score=115.40 Aligned_cols=107 Identities=8% Similarity=-0.187 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhc-CChHHHHHHHHHHHhhCCcc---
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMS-DMPQDALNDAMQAQIISPIW--- 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~l~p~~--- 453 (494)
..+..+.+.|..+...|+|++|+.+|++|+++.+.. ...++.++|.+|... |++++|+..|++|+++.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 457899999999999999999999999999987752 146899999999996 99999999999999999865
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 454 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 454 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
..++.++|.++..+|+|++|+..|+++++++|++..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999999999999999999999988754
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3.5e-11 Score=125.53 Aligned_cols=109 Identities=15% Similarity=0.021 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...++..++.+|..++..|+|++|++.|++|++++|+ +..++.++|.+|..+|++++|+..+++|++++|+++.+|+++
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 3345678999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|.+|..+|++++|++.|+++++++|++..+
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 127 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEEPYI 127 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999999999999999987654
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.24 E-value=4.5e-11 Score=110.33 Aligned_cols=105 Identities=12% Similarity=-0.019 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..++.+|..++..|+|++|++.|+++++.+|+ +..++..+|.+|...|++++|+..++++++++|+++.+++.+|.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 113 (252)
T 2ho1_A 35 EARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGG 113 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHH
Confidence 34788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhc--cccccc
Q 011092 463 ALSAMGMENEAQVALKEGTT--LEAKKN 488 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~--l~~~~~ 488 (494)
++..+|++++|++.|+++++ .+|.+.
T Consensus 114 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 141 (252)
T 2ho1_A 114 FLYEQKRYEEAYQRLLEASQDTLYPERS 141 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHhHHHHHHHHHHHHHhCccCcccH
Confidence 99999999999999999999 666543
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.23 E-value=5e-11 Score=113.26 Aligned_cols=93 Identities=11% Similarity=-0.005 Sum_probs=87.4
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHH-HH
Q 011092 396 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENE-AQ 474 (494)
Q Consensus 396 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~-A~ 474 (494)
...|++++|+..|+++++.+|+ ++.+++++|.+|..+|++++|+..+++|++++|+++.+++++|.++..+|++++ |.
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 3458999999999999999999 899999999999999999999999999999999999999999999999999987 56
Q ss_pred HHHHHhhcccccccc
Q 011092 475 VALKEGTTLEAKKNS 489 (494)
Q Consensus 475 ~~~~~al~l~~~~~~ 489 (494)
+.++++++++|++..
T Consensus 256 ~~~~~~~~~~P~~~~ 270 (291)
T 3mkr_A 256 RYLSQLKDAHRSHPF 270 (291)
T ss_dssp HHHHHHHHHCTTCHH
T ss_pred HHHHHHHHhCCCChH
Confidence 889999999999864
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.4e-11 Score=116.60 Aligned_cols=108 Identities=15% Similarity=0.062 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---------CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCc
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI 452 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~ 452 (494)
..++..+...|..++..|+|++|+..|++++++. |. ...++.++|.+|..+|++++|+..++++++++|+
T Consensus 190 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 190 PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 3456789999999999999999999999999986 55 6789999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 453 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 453 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
++.+|+.+|.++..+|++++|++.|+++++++|.+..+
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 306 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFS 306 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHH
Confidence 99999999999999999999999999999999988654
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.23 E-value=6e-11 Score=113.57 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
++..++.+|..++..|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+..+|++++|+..|+++++++|+.....
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 126 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYEQLG 126 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTTTC-
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccHHHH
Confidence 9999999999999999999999876543
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.22 E-value=6.5e-11 Score=101.48 Aligned_cols=103 Identities=13% Similarity=0.012 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.+...+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|++..++..++.
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 123 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 123 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45778999999999999999999999999999999 89999999999999999999999999999999999999955555
Q ss_pred H--HHHCCChHHHHHHHHHhhccccc
Q 011092 463 A--LSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 463 ~--~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
+ +..+|++++|+..+.++.++-+.
T Consensus 124 ~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 124 CNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccchHHHhcc
Confidence 4 88999999999999998776544
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.22 E-value=4e-11 Score=109.30 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH---HHHhHHHHHHHh------------------cCChHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLM------------------SDMPQDALNDA 443 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~------------------~~~~~~A~~~~ 443 (494)
..+++.+|..+++.|+|++|+..|+++++.+|+ +. .+++++|.+|.. +|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 468899999999999999999999999999998 44 378888988876 57899999999
Q ss_pred HHHHhhCCcchHHH-----------------HHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 444 MQAQIISPIWHIAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 444 ~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+++++.+|+++.++ +.+|.+|...|++++|+..|+++++..|++.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 99999999997665 6789999999999999999999999998875
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.22 E-value=8.8e-12 Score=127.01 Aligned_cols=108 Identities=15% Similarity=0.042 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
...+..+..+|..+++.|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|++.+++|++++|++..++.++|
T Consensus 37 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~ 115 (477)
T 1wao_1 37 PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQ 115 (477)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 345789999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HH--HHHCCChHHHHHHHH-----------Hhhccccccccc
Q 011092 462 AA--LSAMGMENEAQVALK-----------EGTTLEAKKNST 490 (494)
Q Consensus 462 ~~--~~~~~~~~~A~~~~~-----------~al~l~~~~~~a 490 (494)
.+ +..+|++++|++.++ ++++++|+...+
T Consensus 116 ~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~ 157 (477)
T 1wao_1 116 ECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGP 157 (477)
T ss_dssp HHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSC
T ss_pred HHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccccc
Confidence 99 899999999999999 888888876554
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.7e-10 Score=109.69 Aligned_cols=118 Identities=9% Similarity=-0.006 Sum_probs=107.7
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHH----Hhc---CChHHHHHHHH
Q 011092 374 SFQMWTDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCY----LMS---DMPQDALNDAM 444 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~ 444 (494)
......-......+|+.+|..+...+ ++++|++.++++|..+|. +..+|+.|+.++ ..+ +++++++..++
T Consensus 56 t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~ 134 (306)
T 3dra_A 56 TELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILE 134 (306)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHH
T ss_pred HHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHH
Confidence 33344445567789999999999999 999999999999999999 899999999999 777 88999999999
Q ss_pred HHHhhCCcchHHHHHHHHHHHHCCChH--HHHHHHHHhhccccccccccc
Q 011092 445 QAQIISPIWHIASYLQAAALSAMGMEN--EAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 445 ~al~l~p~~~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~~~~~~a~~ 492 (494)
++++++|++..+|+.++.++..+|.++ ++++.+++++++||+|..|+.
T Consensus 135 ~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 135 AMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999999999 999999999999999998864
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=105.12 Aligned_cols=107 Identities=8% Similarity=-0.019 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHh--cCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 382 MQETLNSKKKGDVAFRQ-KDLKDAIECYTQFID--AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
......+...|..++.. |++++|+..|+++++ .+|. ...++.++|.+|...|++++|+..++++++++|+++.+++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 151 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFK 151 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHH
Confidence 34577899999999999 999999999999999 6666 6889999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhcccc-cccc
Q 011092 459 LQAAALSAMGMENEAQVALKEGTTLEA-KKNS 489 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~~~~al~l~~-~~~~ 489 (494)
.+|.++..+|++++|+..|+++++++| .+..
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 183 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVEVLQAD 183 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHH
Confidence 999999999999999999999999998 6544
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=111.73 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+...+...|..+...|++++|++.|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
+..+|++++|++.|+++++++|.
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999998
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-11 Score=108.15 Aligned_cols=98 Identities=11% Similarity=0.037 Sum_probs=87.4
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH-HHHCCCh
Q 011092 392 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-LSAMGME 470 (494)
Q Consensus 392 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~~~~ 470 (494)
+..+...|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|+..|+++++++|+++.+++.+|.+ +...|++
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 44456789999999999999999999 899999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHhhccccccccc
Q 011092 471 --NEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 471 --~~A~~~~~~al~l~~~~~~a 490 (494)
++|+..|+++++++|.+..+
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~ 117 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITA 117 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHH
T ss_pred chHHHHHHHHHHHHhCCCcHHH
Confidence 99999999999999987654
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-10 Score=95.37 Aligned_cols=87 Identities=9% Similarity=-0.040 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
..+...+...|..++..|++++|++.|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|++..+++.+|
T Consensus 47 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~ 125 (133)
T 2lni_A 47 PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQ 125 (133)
T ss_dssp TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 345788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHCCC
Q 011092 462 AALSAMGM 469 (494)
Q Consensus 462 ~~~~~~~~ 469 (494)
.++..+|+
T Consensus 126 ~~~~~~~~ 133 (133)
T 2lni_A 126 RCMMAQYN 133 (133)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99988774
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=9.3e-11 Score=121.66 Aligned_cols=117 Identities=8% Similarity=-0.120 Sum_probs=108.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC--ChHHHHHH
Q 011092 375 FQMWTDQMQETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD--MPQDALND 442 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~ 442 (494)
.+......+...+|+.+|..+...|+ |++|++.|+++|+.+|+ ++.+|++|+.++..++ ++++|++.
T Consensus 53 ~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~ 131 (567)
T 1dce_A 53 SQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELEL 131 (567)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHH
T ss_pred HHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHH
Confidence 33444555778899999999999988 99999999999999999 9999999999999999 66999999
Q ss_pred HHHHHhhCCcchHHHHHHHHHHHHCC-ChHHHHHHHHHhhccccccccccc
Q 011092 443 AMQAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 443 ~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
++++++++|.+..||++||.++..+| .+++|+++++++++++|.+..|+.
T Consensus 132 ~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 132 CARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred HHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 99999999999999999999999999 999999999999999999988764
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-10 Score=107.68 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch---------
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--------- 454 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 454 (494)
.+..+...|..++..|+|++|++.|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|++.
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3456677777777777777777777777777777 677777777777777777777777777777777653
Q ss_pred -------------------------------------------------------------HHHHHHHHHHHHCCChHHH
Q 011092 455 -------------------------------------------------------------IASYLQAAALSAMGMENEA 473 (494)
Q Consensus 455 -------------------------------------------------------------~a~~~~g~~~~~~~~~~~A 473 (494)
.+|+.+|.++..+|++++|
T Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 234 (275)
T 1xnf_A 155 EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSA 234 (275)
T ss_dssp HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHH
Confidence 6678888888888888888
Q ss_pred HHHHHHhhcccccccc
Q 011092 474 QVALKEGTTLEAKKNS 489 (494)
Q Consensus 474 ~~~~~~al~l~~~~~~ 489 (494)
+..|+++++++|++..
T Consensus 235 ~~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 235 TALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHHTTCCTTCH
T ss_pred HHHHHHHHhCCchhHH
Confidence 8888888888886643
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=7.7e-11 Score=112.96 Aligned_cols=102 Identities=12% Similarity=-0.101 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
...+...|..+...|+|++|+..|++++++.|+ +...+.++|.+|...|++++|+..++++++++|+++.+++.+|.++
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 203 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVA 203 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 445566666666666666666666666666666 5555555666666666666666666666666666666666666666
Q ss_pred HHCCChHHHHHHHHHhhcccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
..+|++++|+..|++++++.++.
T Consensus 204 ~~~~~~~~A~~~~~~a~~~~~~~ 226 (330)
T 3hym_B 204 FQNGEWKTAEKWFLDALEKIKAI 226 (330)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHcccHHHHHHHHHHHHHHhhhc
Confidence 66666666666666666655443
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-10 Score=116.57 Aligned_cols=107 Identities=14% Similarity=0.113 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----HHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.....+...|..++..|++++|+..|+++++++|+ ++ .++.+++.+|..+|++++|+..++++++++|+++.+|+
T Consensus 255 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 333 (450)
T 2y4t_A 255 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALK 333 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34445567799999999999999999999999999 63 47899999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 459 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 459 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
.+|.++..+|++++|+..|+++++++|++..+
T Consensus 334 ~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 365 (450)
T 2y4t_A 334 DRAEAYLIEEMYDEAIQDYETAQEHNENDQQI 365 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCcchHHH
Confidence 99999999999999999999999999998654
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-11 Score=102.69 Aligned_cols=84 Identities=7% Similarity=-0.069 Sum_probs=77.3
Q ss_pred HHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccc
Q 011092 406 ECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 406 ~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 485 (494)
..|.++++++|+ +...++++|.++...|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+.+|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 578899999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 011092 486 KKNST 490 (494)
Q Consensus 486 ~~~~a 490 (494)
.+..+
T Consensus 84 ~~~~~ 88 (142)
T 2xcb_A 84 NEPRF 88 (142)
T ss_dssp TCTHH
T ss_pred CCcHH
Confidence 98754
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.4e-11 Score=99.21 Aligned_cols=71 Identities=8% Similarity=-0.135 Sum_probs=67.7
Q ss_pred cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 419 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
.+.++.++|.++.+.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|++..
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch
Confidence 56788999999999999999999999999999999999999999999999999999999999999998754
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=110.80 Aligned_cols=108 Identities=14% Similarity=-0.048 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHH--HHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRS--LCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
.+...+..+|..+.+.|++++|++.|+++++.+|+ ........+ ..+...|++++|+..|+++++.+|+++.+|+++
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 45678889999999999999999999999999998 543322222 223345899999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
|.++..+|++++|+..|++|++++|++..+.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999987653
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.2e-11 Score=117.22 Aligned_cols=105 Identities=12% Similarity=0.002 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH-H
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-L 464 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~ 464 (494)
..++++|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999 899999999999999999999999999999999999999999988 4
Q ss_pred HHCCChHHHHHHHHHhhcccccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
...+..++|...|+++++++|++....
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~~~~ 336 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGGAKS 336 (338)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 556788999999999999999887544
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.7e-10 Score=116.93 Aligned_cols=101 Identities=9% Similarity=0.008 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc---------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC-------
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDA---------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------- 450 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~---------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~------- 450 (494)
.|..+|.+++.+|+|++|++.|++|+++ +|. ....|.|+|.+|..+|++++|+.++++++++.
T Consensus 53 ~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~-~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 53 MCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIR-SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTT-THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchH-HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 3444455555555555555555555443 333 34445555555555555555555555554442
Q ss_pred -CcchHHHHHHHHHHHHC--CChHHHHHHHHHhhccccccc
Q 011092 451 -PIWHIASYLQAAALSAM--GMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 451 -p~~~~a~~~~g~~~~~~--~~~~~A~~~~~~al~l~~~~~ 488 (494)
+..+.++.++|.++..+ ++|++|+.+|++|++++|++.
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 22344444444444332 234555555555555555443
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.8e-10 Score=97.76 Aligned_cols=85 Identities=13% Similarity=0.000 Sum_probs=78.6
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc--hHHHHHHHHHHHHCCChHHHH
Q 011092 397 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAALSAMGMENEAQ 474 (494)
Q Consensus 397 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~~~A~ 474 (494)
..++..+|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++ +.+++++|.++..+|++++|+
T Consensus 86 ~~~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hhcccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 334555689999999999999 89999999999999999999999999999999986 669999999999999999999
Q ss_pred HHHHHhhc
Q 011092 475 VALKEGTT 482 (494)
Q Consensus 475 ~~~~~al~ 482 (494)
..|+++|.
T Consensus 165 ~~y~~al~ 172 (176)
T 2r5s_A 165 SKYRRQLY 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999984
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.12 E-value=3.6e-10 Score=91.31 Aligned_cols=83 Identities=5% Similarity=-0.130 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..+..+|..++..|+|++|+..|++|++++|+ ++.+++++|.+|..+|++++|+..++++++++|+++......
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4677889999999999999999999999999999999 899999999999999999999999999999999998876544
Q ss_pred HHHH
Q 011092 461 AAAL 464 (494)
Q Consensus 461 g~~~ 464 (494)
..+.
T Consensus 102 ~ai~ 105 (117)
T 3k9i_A 102 QAIL 105 (117)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=121.16 Aligned_cols=113 Identities=8% Similarity=-0.013 Sum_probs=105.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC-ChHHHHHHHHHHHhhCCcch
Q 011092 378 WTDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p~~~ 454 (494)
.....+...+|..+|..+.+.+ +|++|+++++++|+++|. +..+|++|+.++..+| .+++|+++++++|+++|.+.
T Consensus 100 l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 100 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 3455677889999999999999 779999999999999999 8999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHC--------------CChHHHHHHHHHhhcccccccccc
Q 011092 455 IASYLQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 455 ~a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.||+++|.++..+ +.+++|++++++|++++|++..++
T Consensus 179 saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW 229 (567)
T 1dce_A 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 229 (567)
T ss_dssp HHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHH
T ss_pred cHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHH
Confidence 9999999999886 668999999999999999998775
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.7e-10 Score=109.60 Aligned_cols=106 Identities=15% Similarity=0.116 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc---
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--- 453 (494)
..+..+...|..++..|+|++|+.+|++|++. ++.....+++|+|.+|..+|+|++|+..+++|+++.+..
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 34567999999999999999999999999952 222145689999999999999999999999999987655
Q ss_pred ---hHHHHHHHHHHHHCCC-hHHHHHHHHHhhccccccc
Q 011092 454 ---HIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 454 ---~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~~ 488 (494)
+.+|+++|.+|..+|+ +++|+++|++|+++.....
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~ 271 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILE 271 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhC
Confidence 8899999999999995 6999999999998876544
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.7e-10 Score=117.24 Aligned_cols=108 Identities=13% Similarity=0.055 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..+...|..+...|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 45678999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++..+|++++|+..|+++++++|.+....
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 415 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQEKIH 415 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcchhhH
Confidence 99999999999999999999999876543
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.8e-10 Score=97.11 Aligned_cols=85 Identities=6% Similarity=-0.114 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...++..++.+|..++..|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+..|+++++++|++..+|+++
T Consensus 41 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 119 (164)
T 3sz7_A 41 APANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119 (164)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHH
T ss_pred CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 3456789999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 011092 461 AAALSA 466 (494)
Q Consensus 461 g~~~~~ 466 (494)
|.+...
T Consensus 120 ~l~~~~ 125 (164)
T 3sz7_A 120 GLETTK 125 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.10 E-value=5e-10 Score=91.29 Aligned_cols=88 Identities=10% Similarity=-0.014 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.++..+...|..++..|+|++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|++..+++.+|.
T Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 122 (131)
T 2vyi_A 44 ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKI 122 (131)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 45678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChH
Q 011092 463 ALSAMGMEN 471 (494)
Q Consensus 463 ~~~~~~~~~ 471 (494)
++..+|+++
T Consensus 123 ~~~~~~~~~ 131 (131)
T 2vyi_A 123 AELKLREAP 131 (131)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhcCC
Confidence 999998863
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.5e-10 Score=115.63 Aligned_cols=92 Identities=13% Similarity=0.086 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..|+++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..+|.+
T Consensus 316 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 394 (457)
T 1kt0_A 316 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMC 394 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHH
Q 011092 464 LSAMGMENEAQVA 476 (494)
Q Consensus 464 ~~~~~~~~~A~~~ 476 (494)
+..++++++|.+.
T Consensus 395 ~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 395 QKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=3.7e-10 Score=108.12 Aligned_cols=105 Identities=8% Similarity=-0.105 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHH-------hcCH-------HHHHHHHHHHHh-cCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHH
Q 011092 382 MQETLNSKKKGDVAFR-------QKDL-------KDAIECYTQFID-AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 446 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~-------~~~~-------~~A~~~~~~ai~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 446 (494)
...+..|+..|..+.. .|++ ++|+..|++|++ ++|+ +..+|.+.+..+...|++++|+..|+++
T Consensus 47 p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a 125 (308)
T 2ond_A 47 GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRL 125 (308)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3455566666666553 3664 777777777777 5777 6677777777777777777777777777
Q ss_pred HhhCCcchH-HHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 447 QIISPIWHI-ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 447 l~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
++++|+++. +|.++|.++..+|++++|+..|++|++++|..
T Consensus 126 l~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 126 LAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC
T ss_pred HhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 777777765 77777777777777777777777777776654
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.9e-10 Score=97.07 Aligned_cols=79 Identities=5% Similarity=-0.024 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-------CCCCcHHHH----hHHHHHHHhcCChHHHHHHHHHHHhhCC
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-------GTMVSPTVY----ARRSLCYLMSDMPQDALNDAMQAQIISP 451 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~----~~~~~~~~~~~~~~~A~~~~~~al~l~p 451 (494)
.++..|.++|.++.+.|+|++|+.+|++||++ +|+ +..+| +++|.++..+|++++|+.+|++|++++|
T Consensus 55 ~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 55 FDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 35669999999999999999999999999999 999 89999 9999999999999999999999999999
Q ss_pred cchHHHHHHHH
Q 011092 452 IWHIASYLQAA 462 (494)
Q Consensus 452 ~~~~a~~~~g~ 462 (494)
++....-.+..
T Consensus 134 ~d~~~~~~~~~ 144 (159)
T 2hr2_A 134 ERKGETPGKER 144 (159)
T ss_dssp HCCSCCTTHHH
T ss_pred CcHHHHHHHHH
Confidence 98765544443
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.4e-10 Score=106.73 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHH---hcCCCC---cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCc-----
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFI---DAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----- 452 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~----- 452 (494)
.+..+...|..++..|+|++|+.+|++|+ +..|++ ...+++++|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 46789999999999999999999999999 445552 1268999999999999999999999999998754
Q ss_pred -chHHHHHHHHHHHHCCChHHH-HHHHHHhhccccccc
Q 011092 453 -WHIASYLQAAALSAMGMENEA-QVALKEGTTLEAKKN 488 (494)
Q Consensus 453 -~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~~~~~ 488 (494)
.+.+|+++|.+|..+|++++| ..+|++|+++.....
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~ 271 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILE 271 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhC
Confidence 278999999999999999999 788999998865543
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=3.1e-10 Score=101.02 Aligned_cols=97 Identities=7% Similarity=0.030 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
...+..+|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 578899999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHH-HHHHHhhc
Q 011092 465 SAMGMENEAQ-VALKEGTT 482 (494)
Q Consensus 465 ~~~~~~~~A~-~~~~~al~ 482 (494)
..+++++++. ..|++.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 44554443
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.5e-10 Score=117.42 Aligned_cols=107 Identities=17% Similarity=0.127 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
++..+...|..+.+.|++++|++.|++++++ +|+....+|.+++.+|.+.|++++|+..++++++++|+++.+|
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 4667888999999999999999999999988 6652267899999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 458 YLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 458 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+.+|.+|...|++++|++.|+++++++|++..+
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~ 586 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEIMA 586 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHH
Confidence 999999999999999999999999999988654
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.7e-10 Score=106.28 Aligned_cols=105 Identities=12% Similarity=-0.025 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh----
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 449 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---- 449 (494)
...+..+...|..+...|+|++|++.|.+|+++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 466789999999999999999999999999988 466 7889999999999999999999999999999
Q ss_pred ----CCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 450 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 450 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+|....+++++|.++..+|++++|+..|++++++.++.
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~ 202 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEK 202 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 88889999999999999999999999999999986653
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.7e-10 Score=97.80 Aligned_cols=89 Identities=10% Similarity=0.006 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch-HHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-IASYLQ 460 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-~a~~~~ 460 (494)
...+..+.++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++ .+...+
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l 138 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREM 138 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 345678999999999999999999999999999999 999999999999999999999999999999999998 667777
Q ss_pred HHHHHHCCChH
Q 011092 461 AAALSAMGMEN 471 (494)
Q Consensus 461 g~~~~~~~~~~ 471 (494)
+.+...++++.
T Consensus 139 ~~~~~~~~~~~ 149 (162)
T 3rkv_A 139 KIVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 77776655443
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.8e-10 Score=107.64 Aligned_cols=119 Identities=13% Similarity=-0.012 Sum_probs=107.8
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhc-C-ChHHHHHHHHHHHhh
Q 011092 373 LSFQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-D-MPQDALNDAMQAQII 449 (494)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~al~l 449 (494)
..........+...+|..+|..+...| +++++++.++++|..+|+ +..+|+.|+.++..+ + +++++++.++++|++
T Consensus 76 lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~ 154 (349)
T 3q7a_A 76 LTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP 154 (349)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Confidence 334444455577789999999999999 599999999999999999 999999999999998 8 999999999999999
Q ss_pred CCcchHHHHHHHHHHHHCCChH--------HHHHHHHHhhccccccccccc
Q 011092 450 SPIWHIASYLQAAALSAMGMEN--------EAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 450 ~p~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~al~l~~~~~~a~~ 492 (494)
+|++..||+.|+.++..+|.++ ++++++++++++||.|..|+.
T Consensus 155 dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~ 205 (349)
T 3q7a_A 155 DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWG 205 (349)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999998 999999999999999988764
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.5e-10 Score=91.32 Aligned_cols=86 Identities=12% Similarity=0.037 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC------Ccch
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------PIWH 454 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~------p~~~ 454 (494)
...++..+..+|..++..|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+..++++++++ |++.
T Consensus 34 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~ 112 (126)
T 3upv_A 34 APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHH
Confidence 3456789999999999999999999999999999999 89999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHC
Q 011092 455 IASYLQAAALSAM 467 (494)
Q Consensus 455 ~a~~~~g~~~~~~ 467 (494)
.++..++.+...+
T Consensus 113 ~~~~~l~~~~~~l 125 (126)
T 3upv_A 113 EIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887654
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-10 Score=97.21 Aligned_cols=78 Identities=13% Similarity=-0.029 Sum_probs=69.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC-----------C
Q 011092 377 MWTDQMQETLNSKKKGDVAFRQKDL----------KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----------M 435 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----------~ 435 (494)
.......+++.|++.|.++.+.+++ ++|+..|++||+++|+ ...+|+++|.+|..+| +
T Consensus 28 Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~ 106 (158)
T 1zu2_A 28 TYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHN 106 (158)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhcc
Confidence 3445557889999999999998875 5999999999999999 9999999999999885 8
Q ss_pred hHHHHHHHHHHHhhCCcchH
Q 011092 436 PQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 436 ~~~A~~~~~~al~l~p~~~~ 455 (494)
+++|+.+|++|++++|++..
T Consensus 107 ~~eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 107 FDLATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999999853
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.07 E-value=3.8e-10 Score=105.30 Aligned_cols=101 Identities=12% Similarity=-0.029 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh----
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 449 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---- 449 (494)
...+..+...|..++..|+|++|+..|++++++. |. ...++.++|.+|..+|++++|+..+++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 4668899999999999999999999999999873 54 6788999999999999999999999999998
Q ss_pred ----CCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcc
Q 011092 450 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 483 (494)
Q Consensus 450 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 483 (494)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999998
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.5e-10 Score=108.23 Aligned_cols=105 Identities=11% Similarity=0.005 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc----
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 453 (494)
..+..+.+.|..+.. |+|++|+.+|++|+++.+.. ...++.++|.+|..+|+|++|+..|++++++.|+.
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 456788999999988 99999999999999987652 15789999999999999999999999999997765
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 454 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 454 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
..+++++|.++..+|++++|+.+|++++ ++|....
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 3588999999999999999999999999 9997654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.07 E-value=4.1e-10 Score=85.94 Aligned_cols=76 Identities=16% Similarity=0.070 Sum_probs=69.6
Q ss_pred CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 415 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 415 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+|.....+++++|.+|...|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|.+..+
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 79 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 79 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHH
Confidence 4543678899999999999999999999999999999999999999999999999999999999999999987654
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.06 E-value=3.1e-11 Score=115.47 Aligned_cols=183 Identities=13% Similarity=0.109 Sum_probs=121.7
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCC--CccEEEEEecCC---ccceeeecC
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNR--LTNLLGCCCEGD---ERLLVAEYM 138 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpn--Iv~l~~~~~~~~---~~~lv~e~~ 138 (494)
+..++.|..+.||+.. ..+++|+.... .....+.+|+.+++.+ .+.. ++.++......+ ..|+||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4456889989998863 46889986532 1246788999999888 4433 455666554433 358899999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------------------------------------- 177 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~----------------------------------------- 177 (494)
+|.+|.+... ..++..++..++.+++..|..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875432 2467778888888998888888861
Q ss_pred ----------------CCcccccccccceeecC--CCCeEEcccCCcccCCCCCccccCCCc---CCCcCCCC-----C-
Q 011092 178 ----------------GRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----G- 230 (494)
Q Consensus 178 ----------------~~ivH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~t~~y---~aPE~~~~-----~- 230 (494)
..++|+|++|.||++++ ...+.|+||+.+............... ..|+.... +
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 01699999999999997 456789999987654322111111111 12221110 0
Q ss_pred --------CCCCCCCchhHHHHHHHHHhCCCCCCC
Q 011092 231 --------RVTPESVIYSFGTLLLDLLSGKHIPPS 257 (494)
Q Consensus 231 --------~~~~~sDv~slG~vl~elltg~~p~~~ 257 (494)
......+.|++|.++|.+.+|..++..
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 011125789999999999999865433
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.2e-10 Score=106.95 Aligned_cols=113 Identities=8% Similarity=-0.006 Sum_probs=104.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCC-hHHHHHHHHHHHhhCCcch
Q 011092 378 WTDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~ 454 (494)
.....+...+|..++..+...+ +|++++++++++++++|. +..+|+.|+.++..+|. ++++++.++++|+++|.+.
T Consensus 101 L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 101 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred HHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 3345577889999999999888 599999999999999999 99999999999999999 5999999999999999999
Q ss_pred HHHHHHHHHHHHC--------------CChHHHHHHHHHhhcccccccccc
Q 011092 455 IASYLQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 455 ~a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.||+++|.++..+ +.++++++++++|+.++|++..++
T Consensus 180 SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW 230 (331)
T 3dss_A 180 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 230 (331)
T ss_dssp HHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999988 569999999999999999999876
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.06 E-value=9.5e-10 Score=108.05 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..+.++|..+++.|+|++|+++|++||+++|+ +..+|+++|.+|..+|++++|+.++++|++++|++..++..+
T Consensus 269 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 269 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4466789999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHH
Q 011092 461 AAALSAMGMENEAQVA 476 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~ 476 (494)
+.++..++++++|.+.
T Consensus 348 ~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 348 LKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988764
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.6e-10 Score=106.59 Aligned_cols=110 Identities=10% Similarity=-0.083 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHH----HHh---cCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChH--HHHHHHHHHHhhCC
Q 011092 381 QMQETLNSKKKGDVA----FRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ--DALNDAMQAQIISP 451 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~----~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~al~l~p 451 (494)
..+...+|..++..+ ... +++++++++++++++.+|. +..+|+.|+.++..+|.++ ++++.++++|+++|
T Consensus 99 nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 99 NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCT
T ss_pred CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCC
Confidence 345566777778777 555 7999999999999999999 9999999999999999999 99999999999999
Q ss_pred cchHHHHHHHHHHHHCCC------hHHHHHHHHHhhcccccccccc
Q 011092 452 IWHIASYLQAAALSAMGM------ENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 452 ~~~~a~~~~g~~~~~~~~------~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+..||++|+.++..+++ +++++++++++|+++|.+..++
T Consensus 178 ~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW 223 (306)
T 3dra_A 178 KNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTW 223 (306)
T ss_dssp TCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred CCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHH
Confidence 999999999999999998 9999999999999999998876
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.06 E-value=5.6e-10 Score=94.61 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc------h
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------H 454 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 454 (494)
..+...|..++..|+|++|++.|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.+.. +
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 467777777777888888888888877764431 14567777777777788888888888877765443 4
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 455 IASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 455 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
.+++.+|.++..+|++++|++.|++++++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 56777777888888888888888887776554
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.05 E-value=7e-10 Score=88.10 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=66.7
Q ss_pred cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 419 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+...+.++|.++...|++++|+..|++|++++|+++.+|+++|.++..+|++++|+++|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467889999999999999999999999999999999999999999999999999999999999999987
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-09 Score=103.62 Aligned_cols=115 Identities=7% Similarity=-0.115 Sum_probs=102.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCC--hHHHHHHHH
Q 011092 377 MWTDQMQETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAM 444 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~ 444 (494)
...-..+...+|..++..+...++ +++++.+++++|..+|. +..+|+.|+.++..+++ +++++..++
T Consensus 56 ~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~ 134 (331)
T 3dss_A 56 ILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCA 134 (331)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHH
T ss_pred HHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHH
Confidence 333445666778888888876665 79999999999999999 99999999999999994 899999999
Q ss_pred HHHhhCCcchHHHHHHHHHHHHCCC-hHHHHHHHHHhhccccccccccc
Q 011092 445 QAQIISPIWHIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 445 ~al~l~p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
++++++|.+..||++++.++..+|. +++++++++++++++|.|..|+.
T Consensus 135 k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 135 RFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 9999999999999999999999999 59999999999999999998764
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.2e-09 Score=101.89 Aligned_cols=103 Identities=9% Similarity=-0.051 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhcCChHHHHHHHHHHH---hhCCcc--
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQ---IISPIW-- 453 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al---~l~p~~-- 453 (494)
....++..|..+...|+|++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..|++|+ +..|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 34456778899999999999999999999876541 15689999999999999999999999999 556664
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 454 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 454 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
+.+++++|.+|..+|+|++|+..|++|+++.++
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 369999999999999999999999999998754
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.03 E-value=5.8e-10 Score=87.42 Aligned_cols=84 Identities=10% Similarity=0.057 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch--HHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--IASYLQ 460 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~--~a~~~~ 460 (494)
.++..++.+|..++..|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+..+++++++.|... .+...+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l 83 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSEL 83 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHH
Confidence 45678999999999999999999999999999999 889999999999999999999999999999987653 334444
Q ss_pred HHHHHHC
Q 011092 461 AAALSAM 467 (494)
Q Consensus 461 g~~~~~~ 467 (494)
..++...
T Consensus 84 ~~~l~~~ 90 (100)
T 3ma5_A 84 QDAKLKA 90 (100)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 4444433
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.9e-10 Score=114.48 Aligned_cols=107 Identities=13% Similarity=0.020 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHH------HHhHHHHHHHh---cCChHHHHHHHHHHHhhCCcch
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT------VYARRSLCYLM---SDMPQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~~~~~~~---~~~~~~A~~~~~~al~l~p~~~ 454 (494)
....+...|..++..|++++|+..|+++++++|+ +.. ++.++|.+|.. .|++++|+..++++++++|+++
T Consensus 371 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 449 (514)
T 2gw1_A 371 APEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSE 449 (514)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccH
Confidence 4567888999999999999999999999999988 543 89999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 455 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 455 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+++.+|.++..+|++++|+..|+++++++|++..+.
T Consensus 450 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 450 QAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 9999999999999999999999999999999877643
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=7.1e-10 Score=105.19 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh----
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 449 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---- 449 (494)
...+..+...|..++..|++++|++.|++++++ .|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 566788999999999999999999999999998 666 6788999999999999999999999999984
Q ss_pred ---------------------------------------------CCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccc
Q 011092 450 ---------------------------------------------SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 484 (494)
Q Consensus 450 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 484 (494)
+|..+.+++.+|.+|..+|++++|++.|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred cc
Q 011092 485 AK 486 (494)
Q Consensus 485 ~~ 486 (494)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 75
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.7e-10 Score=108.06 Aligned_cols=105 Identities=10% Similarity=-0.065 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-----CcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc----
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 453 (494)
..+..+.+.|..+...|+|++|+.+|++|+++.+. ....++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 45778999999999999999999999999988533 124689999999999 99999999999999998764
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 454 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 454 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
..+++++|.+|..+|+|++|+..|++++++.+++.
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 68899999999999999999999999999987764
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.2e-09 Score=103.41 Aligned_cols=98 Identities=9% Similarity=-0.029 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc--hHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQA 461 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g 461 (494)
........+..+...+++++|+..|+++++.+|+ +..+++++|.+|...|++++|+..++++++++|++ ..++.++|
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 184 TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 3445566677788999999999999999999999 99999999999999999999999999999999999 99999999
Q ss_pred HHHHHCCChHHHHHHHHHhhc
Q 011092 462 AALSAMGMENEAQVALKEGTT 482 (494)
Q Consensus 462 ~~~~~~~~~~~A~~~~~~al~ 482 (494)
.++..+|+.++|+..|++++.
T Consensus 263 ~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 263 EILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999985
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.02 E-value=9.5e-10 Score=108.50 Aligned_cols=107 Identities=15% Similarity=0.083 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhcCChHHHHHHHHHHHh-----hC
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQI-----IS 450 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----l~ 450 (494)
....+..+...|..+...|+|++|++.|++|+++.+.. ...++.++|.+|..+|++++|+..+++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 44567889999999999999999999999999885541 235899999999999999999999999999 46
Q ss_pred -CcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 451 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 451 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
|..+.+++++|.++..+|++++|+..|++|+++.++.
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 297 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA 297 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 8899999999999999999999999999999986653
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.6e-09 Score=103.61 Aligned_cols=96 Identities=14% Similarity=-0.024 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHH-hcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 465 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 465 (494)
.|...|..+.+.|++++|+..|++|++.+|. ...+|...+.... .+|++++|+..|++|++++|+++.+|..+|..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 7899999999999999999999999999998 6777776655533 3799999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHhhcc
Q 011092 466 AMGMENEAQVALKEGTTL 483 (494)
Q Consensus 466 ~~~~~~~A~~~~~~al~l 483 (494)
.+|++++|+..|++|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 999999999999999985
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.00 E-value=3.3e-09 Score=99.20 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcc
Q 011092 382 MQETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIW 453 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~ 453 (494)
..++.+++..|..+.. .+++++|++.|++|++.+ ++.+++++|.+|.. .+++++|+..|++|++++ +
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C
Confidence 4556788999999999 999999999999999885 57888999999999 999999999999999884 8
Q ss_pred hHHHHHHHHHHHH----CCChHHHHHHHHHhhcccc
Q 011092 454 HIASYLQAAALSA----MGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 454 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 485 (494)
+.+++++|.+|.. .+++++|+..|++|+++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 8999999999999 9999999999999998764
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.00 E-value=9.7e-10 Score=104.32 Aligned_cols=102 Identities=10% Similarity=-0.014 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc-----HHHHhHHHHHHHhcCChHHHHHHHHHHHhh-------CCcch
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQII-------SPIWH 454 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l-------~p~~~ 454 (494)
.+...|..+...++|++|+..|++|+++.+... ..+++++|.+|..+|++++|+..|++|+++ .+..+
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 444589999999999999999999999755421 347999999999999999999999999952 34456
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 455 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 455 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
.+++++|.+|..+|+|++|+..|++|+++.++..
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 7999999999999999999999999999987654
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-09 Score=113.52 Aligned_cols=101 Identities=8% Similarity=-0.188 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+...|...|..+.+.|++++|++.|+++++.+|+ +...|+.++.+|...|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 484 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVV 484 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3556667777777777777777777777777776 666677777777777777777777777777777777777777777
Q ss_pred HHHCCChHHHHHHHHHhhcccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~ 485 (494)
|...|++++|++.|++++++.|
T Consensus 485 ~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 485 AFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhhh
Confidence 7777777777777777777654
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=96.74 Aligned_cols=110 Identities=12% Similarity=-0.058 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCC---CcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 453 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~ 453 (494)
.....+..+...|..+...|+|++|+..|++++++ .++ ....++.++|.+|..+|++++|+..+++++++.+..
T Consensus 61 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 61 DHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 34466778889999999999999999999999887 332 135668888999999999999999999998764322
Q ss_pred ------hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 454 ------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 454 ------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
..++.++|.++..+|++++|+..|++|+++..+...
T Consensus 141 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 141 DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 335688899999999999999999999988765543
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.99 E-value=2e-09 Score=91.18 Aligned_cols=106 Identities=8% Similarity=0.038 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc---
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 453 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--- 453 (494)
...+..+...|..++..|+|++|+..|.+++++.+.. ...++.++|.+|..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 3567889999999999999999999999999875432 23578999999999999999999999999987654
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 454 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 454 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
..+++++|.++..+|++++|++.|++++++.++.
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 122 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 122 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 7789999999999999999999999999886544
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-09 Score=101.48 Aligned_cols=107 Identities=12% Similarity=-0.047 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC--Cc-chHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PI-WHIAS 457 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--p~-~~~a~ 457 (494)
..+. ..+.+|..+++.++|++|+..|++++...+. ....+++++|.++..+|++++|+..|++++.-. |. .+.++
T Consensus 133 p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~ 211 (282)
T 4f3v_A 133 SEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIA 211 (282)
T ss_dssp CHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHH
T ss_pred CchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHH
Confidence 3455 8899999999999999999999999876422 124589999999999999999999999998655 66 77899
Q ss_pred HHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 458 YLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 458 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+++|.++..+|+.++|...|++++.++|. ..+
T Consensus 212 ~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~ 243 (282)
T 4f3v_A 212 WYLAMARRSQGNESAAVALLEWLQTTHPE-PKV 243 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHH
Confidence 99999999999999999999999999998 543
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.8e-09 Score=106.33 Aligned_cols=106 Identities=11% Similarity=0.001 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-----CcHHHHhHHHHHHHhcCChHHHHHHHHHHHh-----hCC
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQI-----ISP 451 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----l~p 451 (494)
...+..+...|..+...|+|++|++.|++|+++.+. ....++.++|.+|..+|++++|+..+++|++ .+|
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 258 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD 258 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh
Confidence 356788999999999999999999999999987431 1356899999999999999999999999999 889
Q ss_pred cchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 452 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 452 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
..+.+++++|.++..+|++++|+..|++|+++.++.
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999987654
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.1e-09 Score=106.71 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----HHHhHHHHHHHhcCChHHHHHHHHHHHhh------CC
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQII------SP 451 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p 451 (494)
...+..++..|..++..|+|++|+..|+++++++|+ +. .++.++|.+|..+|++++|+..+++++++ +|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 356778889999999999999999999999999999 54 57999999999999999999999999999 78
Q ss_pred cchHHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 452 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 452 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
..+.+++.+|.+|..+|++++|+..|++++++.++
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 158 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQ 158 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999998543
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.3e-09 Score=88.68 Aligned_cols=71 Identities=14% Similarity=-0.028 Sum_probs=66.5
Q ss_pred HHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 421 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
..++..|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|.+..+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999987653
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.7e-09 Score=101.88 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc----HHHHhHHHHHHHhcCChHHHHHHHHHHHhh------CCcc
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIW 453 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~ 453 (494)
....++..|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3567888999999999999999999999999999 5 467899999999999999999999999988 6677
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 454 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 454 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+.+++.+|.++..+|++++|+..|++++++.++..
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 117 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999999999987654
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.97 E-value=4.6e-10 Score=106.02 Aligned_cols=105 Identities=6% Similarity=-0.014 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH-----
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI----- 455 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~----- 455 (494)
...++..+..+|..++..|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+..|++|++++|+++.
T Consensus 34 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 112 (281)
T 2c2l_A 34 NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112 (281)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHH
Confidence 3346788999999999999999999999999999999 8999999999999999999999999999999997621
Q ss_pred --------------------------HHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 456 --------------------------ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 456 --------------------------a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
....+|. +..|++++|++.|++|++++|.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~~ 169 (281)
T 2c2l_A 113 IPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDDG 169 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccchh
Confidence 1111222 236899999999999999999754
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3.9e-09 Score=101.35 Aligned_cols=99 Identities=11% Similarity=-0.028 Sum_probs=90.9
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC-ChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHC-C-C
Q 011092 393 DVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAALSAM-G-M 469 (494)
Q Consensus 393 ~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~-~-~ 469 (494)
....+.+..++|++.++++|+++|+ +..+|+.|+.++..++ .+++++..++++|.++|++..+|+.|+.++..+ + +
T Consensus 62 ~~~~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~ 140 (349)
T 3q7a_A 62 AIAAKEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQD 140 (349)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHhCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCC
Confidence 3344556678999999999999999 9999999999999999 599999999999999999999999999999998 8 9
Q ss_pred hHHHHHHHHHhhccccccccccc
Q 011092 470 ENEAQVALKEGTTLEAKKNSTAG 492 (494)
Q Consensus 470 ~~~A~~~~~~al~l~~~~~~a~~ 492 (494)
++++++.+++++++||++..|+.
T Consensus 141 ~~~EL~~~~k~L~~dpkNy~AW~ 163 (349)
T 3q7a_A 141 PVSEIEYIHGSLLPDPKNYHTWA 163 (349)
T ss_dssp CHHHHHHHHHHTSSCTTCHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999988753
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=85.43 Aligned_cols=75 Identities=11% Similarity=0.000 Sum_probs=70.6
Q ss_pred cCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccc--ccc
Q 011092 414 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNS 489 (494)
Q Consensus 414 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~--~~~ 489 (494)
++|+ +...+.++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|+ +..
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 77 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKD 77 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHH
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHH
Confidence 4677 78889999999999999999999999999999999999999999999999999999999999999998 543
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=109.45 Aligned_cols=105 Identities=12% Similarity=0.056 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhc-------------------CChHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-------------------DMPQDALNDA 443 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-------------------~~~~~A~~~~ 443 (494)
.....+..+|..+...|++++|+..|++|++.+|+ +..++.++|.+|... +.+++|+..+
T Consensus 245 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 323 (472)
T 4g1t_A 245 GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHL 323 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45667888999999999999999999999999999 888888888887543 3467788888
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 444 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 444 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+++++++|.++.+++++|.++..+|++++|+..|++|++++++..
T Consensus 324 ~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 324 KKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 888888888888888888888888888888888888888877654
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.8e-09 Score=105.12 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc----HHHHhHHHHHHHhcCChHHHHHHHHHHHhh------CCcch
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 454 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~ 454 (494)
+..+...|..++..|+|++|+..|+++++++|+ + ..++.++|.+|...|++++|+..+++|+++ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 457889999999999999999999999999998 5 467999999999999999999999999988 56778
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 455 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 455 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
.+++.+|.++..+|++++|+..|++|+++.++..
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999988654
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.1e-09 Score=106.08 Aligned_cols=104 Identities=10% Similarity=-0.047 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch--
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-- 454 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-- 454 (494)
..+..+...|..++..|+|++|+..|++|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.|...
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 220 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQP 220 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCCh
Confidence 455666677777777777777777777777653331 234566677777777777777777777776644332
Q ss_pred ----HHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 455 ----IASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 455 ----~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
.+++++|.+|..+|++++|+..|++|+++.++
T Consensus 221 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 221 QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 46777777777777777777777777766443
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=84.36 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=65.0
Q ss_pred HhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH-HHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 423 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHI-ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 423 ~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+++|.++...|++++|+..|+++++++|+++. +|+++|.+|..+|++++|+++|+++++++|++..+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 356889999999999999999999999999999 999999999999999999999999999999987654
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.5e-09 Score=99.57 Aligned_cols=102 Identities=13% Similarity=-0.030 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC--
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 450 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-- 450 (494)
....+..+...|..++..|+|++|+..|++++++ .|. ...++.++|.+|..+|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4567788999999999999999999999999987 344 67889999999999999999999999999884
Q ss_pred ------CcchHHHHHHHHHHHHCCChHHHHHHHHHhhcc
Q 011092 451 ------PIWHIASYLQAAALSAMGMENEAQVALKEGTTL 483 (494)
Q Consensus 451 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 483 (494)
|....+++++|.++..+|++++|+..|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999998
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.5e-08 Score=84.63 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
...+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999999 8999999999999999999999999999999999999999888775
Q ss_pred HH
Q 011092 465 SA 466 (494)
Q Consensus 465 ~~ 466 (494)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.92 E-value=9.2e-09 Score=82.83 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+...+...|..++..|++++|+..|+++++.+|. +...+.+++.+|..+|++++|+..++++++++|+++.++..+|.+
T Consensus 42 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 120 (125)
T 1na0_A 42 NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 120 (125)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4567889999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHCC
Q 011092 464 LSAMG 468 (494)
Q Consensus 464 ~~~~~ 468 (494)
+..+|
T Consensus 121 ~~~~g 125 (125)
T 1na0_A 121 KQKQG 125 (125)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 87654
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.8e-09 Score=87.31 Aligned_cols=77 Identities=10% Similarity=0.017 Sum_probs=70.6
Q ss_pred hcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 413 DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 413 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
..+|. .+..+.+.|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|.+..+
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 79 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKA 79 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHH
Confidence 35666 789999999999999999999999999999999999999999999999999999999999999999987654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=7.3e-09 Score=82.59 Aligned_cols=82 Identities=9% Similarity=-0.059 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.+...+...|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.++..++.
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 114 (118)
T 1elw_A 36 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 114 (118)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 89999999999999999999999999999999999999999988
Q ss_pred HHH
Q 011092 463 ALS 465 (494)
Q Consensus 463 ~~~ 465 (494)
+..
T Consensus 115 ~~~ 117 (118)
T 1elw_A 115 MEA 117 (118)
T ss_dssp HHH
T ss_pred hhc
Confidence 753
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.1e-09 Score=105.56 Aligned_cols=109 Identities=8% Similarity=-0.057 Sum_probs=91.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--cHHHHhHHHHHHHhcCChHHHHHHHHHHHhh
Q 011092 377 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII 449 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l 449 (494)
.+.+..+.+....+.+..+..+|+|++|+..|++++++ .|++ ....++|+|.+|..+|+|++|+..++++|++
T Consensus 301 ~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 380 (490)
T 3n71_A 301 VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDG 380 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 33444566667778888889999999999999999975 2331 4577999999999999999999999999976
Q ss_pred C--------CcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccc
Q 011092 450 S--------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 450 ~--------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 485 (494)
. |+-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 381 ~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 381 YMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3 55577899999999999999999999999998743
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.1e-08 Score=95.67 Aligned_cols=101 Identities=20% Similarity=0.127 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcchH
Q 011092 384 ETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 384 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~ 455 (494)
+...+...|..+.. .+++++|+..|++|++.+ +..+++++|.+|.. .+++++|+..+++|++++| +.
T Consensus 145 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~ 219 (273)
T 1ouv_A 145 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GG 219 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HH
T ss_pred cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HH
Confidence 46678889999998 899999999999999884 46888899999999 9999999999999999976 88
Q ss_pred HHHHHHHHHHH----CCChHHHHHHHHHhhcccccccc
Q 011092 456 ASYLQAAALSA----MGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 456 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
+++++|.+|.. .+++++|+++|++|++++|.+..
T Consensus 220 a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~ 257 (273)
T 1ouv_A 220 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC 257 (273)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999 99999999999999999887653
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=5.8e-09 Score=86.77 Aligned_cols=92 Identities=12% Similarity=0.009 Sum_probs=81.4
Q ss_pred cCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC---ChHHHHHHHHHHHhhC-C-cchHHHHHHHHHHHHCCChHHH
Q 011092 399 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENEA 473 (494)
Q Consensus 399 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~A 473 (494)
.....+.+.|.++++.++. +....++.|.++.+.+ ++++|+..++..++.+ | +..+++|++|.+++++|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 4456788888999888887 8899999999999988 6779999999999999 7 6789999999999999999999
Q ss_pred HHHHHHhhcccccccccc
Q 011092 474 QVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 474 ~~~~~~al~l~~~~~~a~ 491 (494)
+++++++|+++|++..|.
T Consensus 91 ~~y~~~lL~ieP~n~QA~ 108 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQAK 108 (152)
T ss_dssp HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhcCCCCHHHH
Confidence 999999999999887653
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.86 E-value=4.9e-09 Score=84.12 Aligned_cols=85 Identities=7% Similarity=-0.059 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc--hHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQ 460 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~ 460 (494)
.++..++..|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|+. ..+...+
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l 95 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKEL 95 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 45678999999999999999999999999999999 89999999999999999999999999999999865 3444455
Q ss_pred HHHHHHCC
Q 011092 461 AAALSAMG 468 (494)
Q Consensus 461 g~~~~~~~ 468 (494)
...+..++
T Consensus 96 ~~~l~~l~ 103 (115)
T 2kat_A 96 QVFLRRLA 103 (115)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 54444433
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-08 Score=78.00 Aligned_cols=72 Identities=14% Similarity=-0.091 Sum_probs=66.0
Q ss_pred CCCCcHHHHhHHHHHHHhcCC---hHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 415 GTMVSPTVYARRSLCYLMSDM---PQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 415 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|..++..|+|++|+..|+++++.+|..
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 577 88999999999876655 7899999999999999999999999999999999999999999999999983
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.9e-08 Score=80.95 Aligned_cols=83 Identities=11% Similarity=-0.044 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..++..|..++..|+|++|+..|+++++.+|+ + +.+++++|.+|..+|++++|+..++++++.+|+++.+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 68899999999999999999999999999999 7 7889999999999999999999999999999999988777766
Q ss_pred HHHHCCC
Q 011092 463 ALSAMGM 469 (494)
Q Consensus 463 ~~~~~~~ 469 (494)
+-...++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5554444
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=91.96 Aligned_cols=97 Identities=13% Similarity=-0.025 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCC--c
Q 011092 383 QETLNSKKKGDVAFRQK----DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISP--I 452 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p--~ 452 (494)
.++.+++.+|..+.. + ++++|++.|++|++. . ++.+++++|.+|.. .+++++|+..|++|++..| +
T Consensus 48 g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 123 (212)
T 3rjv_A 48 GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--G-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA 123 (212)
T ss_dssp TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH
T ss_pred CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc
Confidence 345666666666666 5 677777777777543 3 55666677777765 6677777777777777766 4
Q ss_pred chHHHHHHHHHHHH----CCChHHHHHHHHHhhcc
Q 011092 453 WHIASYLQAAALSA----MGMENEAQVALKEGTTL 483 (494)
Q Consensus 453 ~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 483 (494)
++.+++++|.+|.. .+++++|+.+|++|+++
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 57777777777777 66777777777777766
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=6.1e-09 Score=102.71 Aligned_cols=105 Identities=9% Similarity=0.042 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc----
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 453 (494)
..+..+...|..++..|+|++|+..|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.|..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 344556666666666666666666666666654431 11256666666666666666666666666665554
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 454 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 454 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+.+++.+|.++..+|++++|+..|++|+++.++.
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 5566666666666666666666666666665443
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.84 E-value=9.7e-09 Score=90.96 Aligned_cols=104 Identities=11% Similarity=0.019 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh------cCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh---CC--
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFID------AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---SP-- 451 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---~p-- 451 (494)
..+..+...|..++..|+|++|+..|++|++ ..+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 4577889999999999999999999999999 8998 8899999999999999999999999999998 33
Q ss_pred --cchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 452 --IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 452 --~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
....+++++|.++..+|++++|+..|++++++.++.
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 446789999999999999999999999999886543
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.7e-09 Score=103.02 Aligned_cols=103 Identities=10% Similarity=0.014 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH------HHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc----
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP------TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 453 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 453 (494)
.+..+...|..++..|+|++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|..
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 300 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGERE 300 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 3446666666666666666666666666665544 22 256666666666666666666666666665543
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 454 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 454 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
..+++.+|.++..+|++++|+..|++++++.++.
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 336 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL 336 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC
Confidence 5566666666666666666666666666655443
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-08 Score=99.80 Aligned_cols=106 Identities=12% Similarity=-0.005 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCC----
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISP---- 451 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p---- 451 (494)
...+..++..|..++..|++++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..+++|+++.+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 3556677777777777777777777777777654321 234566777777777777777777777776632
Q ss_pred --cchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 452 --IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 452 --~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
..+.+++++|.+|..+|++++|+..|++|+++..+.
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 224567777777777777777777777777665443
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2e-08 Score=100.13 Aligned_cols=97 Identities=10% Similarity=-0.099 Sum_probs=81.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--cHHHHhHHHHHHHhcCChHHHHHHHHHHHhh--------CCcc
Q 011092 389 KKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII--------SPIW 453 (494)
Q Consensus 389 ~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l--------~p~~ 453 (494)
...+......|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..++++|++ .|+-
T Consensus 302 le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 302 IEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 34444445678999999999999975 3441 4567999999999999999999999999976 3555
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHhhcccc
Q 011092 454 HIASYLQAAALSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 454 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 485 (494)
+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 382 a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 382 ASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999998753
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.5e-08 Score=89.68 Aligned_cols=104 Identities=11% Similarity=-0.035 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCC-CcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcc
Q 011092 383 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIW 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~ 453 (494)
.++.+++.+|..+.. .+++++|++.|++|++..+. ..+.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 457788999999988 89999999999999999883 148899999999999 88999999999999999 788
Q ss_pred hHHHHHHHHHHHHC-C-----ChHHHHHHHHHhhcccccc
Q 011092 454 HIASYLQAAALSAM-G-----MENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 454 ~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~~~~ 487 (494)
+.+++++|.+|... | ++++|+.+|++|++.....
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~ 201 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDT 201 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHH
Confidence 89999999999865 3 8999999999999876543
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=97.52 Aligned_cols=101 Identities=9% Similarity=0.042 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc------
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------ 453 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------ 453 (494)
+..+...|..++..|++++|+..|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.|..
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 262 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 262 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHH
Confidence 3344455555555555555555555555443320 11244455555555555555555555555444433
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHhhcccc
Q 011092 454 HIASYLQAAALSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 454 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 485 (494)
..+++.+|.++..+|++++|+..|++++++.+
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555555554443
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.78 E-value=5.3e-08 Score=76.72 Aligned_cols=77 Identities=14% Similarity=-0.018 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
+...+..|..++++|+|..|+..|++|++.. +. ...++.++|.+|.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5677899999999999999999999999863 23 678899999999999999999999999999999999999
Q ss_pred HHHHH
Q 011092 458 YLQAA 462 (494)
Q Consensus 458 ~~~g~ 462 (494)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 98873
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.75 E-value=7.7e-08 Score=92.21 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=56.8
Q ss_pred HHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 422 VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 422 ~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+|.-.+..+...|++++|+..+++|++++|+ +.+|..+|.++...|++++|++.|++|+.++|...
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 3333444555579999999999999999986 67899999999999999999999999999999764
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=7e-08 Score=96.34 Aligned_cols=101 Identities=12% Similarity=0.018 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----CCC--cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC-------
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-----TMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------- 450 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~------- 450 (494)
+.........+.++|+|++|++.|++++++. |++ -...++|++.+|..+|+|++|+..++++|++.
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 4455566677888999999999999999763 331 35679999999999999999999999999763
Q ss_pred -CcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccc
Q 011092 451 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 451 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 485 (494)
|+-+..++++|.+|..+|++++|+..|++|+++-.
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~ 402 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMR 402 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 44567899999999999999999999999998743
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.66 E-value=5.3e-08 Score=79.04 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc-------HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-------PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 455 (494)
.++..+...|..++..|+|++|+..|+++++++|+ + ..+++++|.+|..+|++++|+..++++++++| ++.
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~ 113 (131)
T 1elr_A 36 TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPD 113 (131)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHH
Confidence 34678899999999999999999999999999887 5 88999999999999999999999999999999 688
Q ss_pred HHHHHHHHHHHCCC
Q 011092 456 ASYLQAAALSAMGM 469 (494)
Q Consensus 456 a~~~~g~~~~~~~~ 469 (494)
.+..++.++..+++
T Consensus 114 ~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 114 VLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 89998888766543
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.65 E-value=8.2e-08 Score=99.04 Aligned_cols=106 Identities=8% Similarity=-0.115 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHHHHHHH-------hcCHH-------HHHHHHHHHHh-cCCCCcHHHHhHHHHHHHhcCChHHHHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFR-------QKDLK-------DAIECYTQFID-AGTMVSPTVYARRSLCYLMSDMPQDALNDAM 444 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 444 (494)
.....+..|+..|..+.+ .|+++ +|+..|++|++ ++|+ +..+|.+.+..+...|++++|...|+
T Consensus 267 ~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~ 345 (530)
T 2ooe_A 267 VLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYN 345 (530)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 344567788888888775 68876 88899999987 7888 88888888888888889989999999
Q ss_pred HHHhhCCcch-HHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 445 QAQIISPIWH-IASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 445 ~al~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
++++++|.++ .+|..+|.++..+|++++|++.|++|++..|.
T Consensus 346 ~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 346 RLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 9998888875 68888888888888888888888888877664
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-07 Score=76.82 Aligned_cols=91 Identities=11% Similarity=-0.062 Sum_probs=84.3
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH
Q 011092 391 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 466 (494)
Q Consensus 391 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 466 (494)
.|..+...+.+++|++.|++|.+. . ++.+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 888898889999999999999998 4 67999999999998 89999999999999987 789999999999999
Q ss_pred ----CCChHHHHHHHHHhhccccc
Q 011092 467 ----MGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 467 ----~~~~~~A~~~~~~al~l~~~ 486 (494)
.+++++|+.+|++|.+....
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999988543
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.1e-07 Score=90.65 Aligned_cols=134 Identities=13% Similarity=0.056 Sum_probs=93.6
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCC---CCccEEEEEe-cCCccceeeecCCC
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNN---RLTNLLGCCC-EGDERLLVAEYMPN 140 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~l~~~~~-~~~~~~lv~e~~~~ 140 (494)
+..++.|....||+. |..+++|+.... .....+.+|+.+|..+.+. .|.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 345577888899987 567888985321 1245788999999999652 3667777774 44567899999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG------------------------------------------ 178 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~------------------------------------------ 178 (494)
.+|.+... ..++......++.++...|..||+..
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 12455555555666666665555421
Q ss_pred -----------------CcccccccccceeecC---CCCe-EEcccCCccc
Q 011092 179 -----------------RALYHDLNAYRILFDE---DGNP-RLSTFGLMKN 208 (494)
Q Consensus 179 -----------------~ivH~Dlkp~Nill~~---~~~~-kl~Dfgla~~ 208 (494)
.++|+|++|.|||++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1589999999999987 4554 7999997754
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.1e-07 Score=88.36 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc--hHHHHHHHHHH
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAAL 464 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~ 464 (494)
.....+..+...|+|++|.+.|+.++...|+ .. ..+.+|.++.+.+++++|+..+++++...+.. ..+++++|.++
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al 181 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAA 181 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHH
Confidence 4455688899999999999999999999998 66 88999999999999999999999998864332 45899999999
Q ss_pred HHCCChHHHHHHHHHhhccc
Q 011092 465 SAMGMENEAQVALKEGTTLE 484 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~ 484 (494)
..+|++++|+.+|++++.-.
T Consensus 182 ~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 182 ANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHTTCHHHHHHHHHHHHTST
T ss_pred HHCCCHHHHHHHHHHHhcCC
Confidence 99999999999999998543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.56 E-value=1.6e-07 Score=91.85 Aligned_cols=101 Identities=14% Similarity=-0.000 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCc-----
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----- 452 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~----- 452 (494)
..+...|..++..|+|++|+..|++++++. |. ...++.++|.+|...|++++|+..+++++++.|.
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 346789999999999999999999999875 33 4567888999999999999999999999999986
Q ss_pred chHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 453 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 453 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
...++..+|.++...|++++|...+++++++.+..
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 35689999999999999999999999999886654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=3.1e-07 Score=85.82 Aligned_cols=126 Identities=17% Similarity=0.057 Sum_probs=90.2
Q ss_pred CeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceeeecCCCCCHHHHhcccC
Q 011092 74 NVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 151 (494)
Q Consensus 74 g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 151 (494)
..||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++..++..++|||+++|.++.+....
T Consensus 39 ~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~-- 113 (272)
T 4gkh_A 39 ATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE-- 113 (272)
T ss_dssp CEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH--
T ss_pred CeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC--
Confidence 468988744 4678999986543 2456888999999883 44578899999988899999999999888765431
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------------------C--
Q 011092 152 THPMKWAMRLRVVLHLAQALEYCTSK---------------------------------------------------G-- 178 (494)
Q Consensus 152 ~~~l~~~~~~~i~~~i~~~l~~lH~~---------------------------------------------------~-- 178 (494)
.......+..++...|.-||+. .
T Consensus 114 ----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (272)
T 4gkh_A 114 ----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF 189 (272)
T ss_dssp ----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred ----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence 1112233444555555555521 0
Q ss_pred ----CcccccccccceeecCCCCeEEcccCCccc
Q 011092 179 ----RALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 179 ----~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 168999999999999877777999998653
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.54 E-value=3.7e-07 Score=89.25 Aligned_cols=97 Identities=15% Similarity=0.154 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC-------
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------- 450 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~------- 450 (494)
..+...|..++..|+|++|+..|++|+++ .-- .++.++|.++..+|++++|+..+++++++.
T Consensus 54 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~ 130 (373)
T 1hz4_A 54 VATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ 130 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 34444455555555555555555555431 111 223344445555555555555555555443
Q ss_pred -CcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccc
Q 011092 451 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 451 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 485 (494)
|....++.++|.++..+|++++|...|++++++.+
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 131 LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 22334444455555555555555555555554443
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.52 E-value=5.1e-07 Score=93.05 Aligned_cols=102 Identities=15% Similarity=0.007 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHH-HHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL-CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~-~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
..|...|..+.+.|++++|++.|++|++..|. ....+...+. .+...|++++|...|+++++.+|+++.+|..+|.++
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 57888888888899999999999999998887 5555554443 355689999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
..+|++++|...|++|++..|.+.
T Consensus 436 ~~~g~~~~Ar~~~~~al~~~~~~~ 459 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTSGSLPP 459 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHSCCSCG
T ss_pred HhCCCHhhHHHHHHHHHhccCCCH
Confidence 999999999999999998866543
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=6.2e-07 Score=82.46 Aligned_cols=87 Identities=11% Similarity=0.024 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHhcCCCC-cHHHHhHHHHHHHhc-----CChHHHHHHHHHHHhhCCcc-hHHHHHHHHHHHH-CCChHH
Q 011092 401 LKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMS-----DMPQDALNDAMQAQIISPIW-HIASYLQAAALSA-MGMENE 472 (494)
Q Consensus 401 ~~~A~~~~~~ai~~~p~~-~~~~~~~~~~~~~~~-----~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~-~~~~~~ 472 (494)
..+|...+++||++||+. +..+|..+|..|.+. |+.++|.++|++||+++|+. ..+++..|..+.. +|++++
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 688999999999999993 345888999999995 99999999999999999975 9999999999988 599999
Q ss_pred HHHHHHHhhcccccc
Q 011092 473 AQVALKEGTTLEAKK 487 (494)
Q Consensus 473 A~~~~~~al~l~~~~ 487 (494)
|.+.+++|+.++|..
T Consensus 259 a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 259 FDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999999884
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.3e-07 Score=90.53 Aligned_cols=81 Identities=5% Similarity=-0.045 Sum_probs=57.2
Q ss_pred cccC-CCCCCCeEEEEEEc-------CCCEEEEEEecCCC---CCChHHHHHHHHHHhccC-C--CCCccEEEEEecC--
Q 011092 65 VSEH-GEKAPNVVYKGKLE-------NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLR-N--NRLTNLLGCCCEG-- 128 (494)
Q Consensus 65 i~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--pnIv~l~~~~~~~-- 128 (494)
+..+ +.|..+.+|+.... ++..+++|...... ......+.+|+.+++.+. + ..+.+++.++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3455 77888999998754 26688999865432 111245788999998883 3 3578888888665
Q ss_pred -CccceeeecCCCCCHHH
Q 011092 129 -DERLLVAEYMPNETLAK 145 (494)
Q Consensus 129 -~~~~lv~e~~~~gsL~~ 145 (494)
+..++||||++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877653
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.43 E-value=1e-06 Score=89.86 Aligned_cols=99 Identities=13% Similarity=0.000 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcchH
Q 011092 383 QETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~ 455 (494)
.++.+++.+|..++..| ++++|++.|++|++. . ++.+++++|.+|.. .+++++|+..|++|++.. ++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHH
Confidence 45677888999998855 899999999999988 4 67899999999999 899999999999999864 689
Q ss_pred HHHHHHHHHHH----CCChHHHHHHHHHhhccccc
Q 011092 456 ASYLQAAALSA----MGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 456 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~ 486 (494)
+++++|.+|.. .+++++|+.+|++|++.+|+
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 99999999998 89999999999999999843
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.4e-07 Score=91.92 Aligned_cols=103 Identities=9% Similarity=-0.025 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--cHHHHhHHHHHHHhcCChHHHHHHHHHHHhh----
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 449 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---- 449 (494)
....+..+.++|.+|..+|+|++|+..|++||++ -|++ -...++|+|.+|..+|+|++|+..+++|+++
T Consensus 347 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 347 NLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999999999999965 2331 5677999999999999999999999999975
Q ss_pred -CCcc---hHHHHHHHHHHHHCCChHHHHHHHHHhhcc
Q 011092 450 -SPIW---HIASYLQAAALSAMGMENEAQVALKEGTTL 483 (494)
Q Consensus 450 -~p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 483 (494)
-|++ .+...+++.++..+++|++|...|.+|.+-
T Consensus 427 lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 427 HGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3554 667788999999999999999999998653
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.4e-06 Score=87.93 Aligned_cols=96 Identities=9% Similarity=0.024 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhc----CChHHHHHHHHHHHhhCCcchHHH
Q 011092 385 TLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----DMPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
+.+++.+|..+...| ++++|++.|++|++..|. .+..++++|.+|... +++++|+..|++|. |+++.++
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 346777777777777 778888888888877777 666667777777655 67777777777776 7777777
Q ss_pred HHHHHH-H--HHCCChHHHHHHHHHhhccc
Q 011092 458 YLQAAA-L--SAMGMENEAQVALKEGTTLE 484 (494)
Q Consensus 458 ~~~g~~-~--~~~~~~~~A~~~~~~al~l~ 484 (494)
+++|.+ + ...+++++|+.+|++|++.+
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 777777 3 46677777777777777543
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=3.4e-06 Score=83.53 Aligned_cols=96 Identities=11% Similarity=0.050 Sum_probs=59.8
Q ss_pred ccccCHHHHHHHhcC---Ccc--ccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCC-------CChHHHHHHHHHH
Q 011092 44 FREFTLEQLKNATSG---FAV--ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-------PDPRQFLEEARSV 110 (494)
Q Consensus 44 ~~~~~~~~~~~~~~~---~~~--~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l 110 (494)
+..++.+++...... |.. .--+..+|.|..+.||++... +++.|+||....... ....++..|.+++
T Consensus 9 ~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L 88 (397)
T 2olc_A 9 YETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSAL 88 (397)
T ss_dssp CCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHH
Confidence 445566666555432 221 123567899999999999743 468999998653211 1245678899999
Q ss_pred hccCC--C-CCccEEEEEecCCccceeeecCCCC
Q 011092 111 GQLRN--N-RLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 111 ~~l~h--p-nIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
..+.. | .+++++.+. .+..++||||++|.
T Consensus 89 ~~l~~~~~~~vP~~~~~d--~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 89 IRQGEHVPHLVPRVFYSD--TEMAVTVMEDLSHL 120 (397)
T ss_dssp HHHHTTCGGGSCCEEEEE--TTTTEEEECCCTTS
T ss_pred HHhhhhCCCCcCeEEEEc--CCccEEEEEeCCCc
Confidence 88832 3 345666543 44568999999864
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.3e-06 Score=66.98 Aligned_cols=70 Identities=7% Similarity=-0.092 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch
Q 011092 384 ETLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 454 (494)
++..+...|.+++..++ .++|...+++|++++|+ +..++..+|..+++.|+|++|+..++++++.+|..+
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 46778889999976655 79999999999999999 999999999999999999999999999999999843
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.7e-06 Score=67.96 Aligned_cols=71 Identities=10% Similarity=-0.197 Sum_probs=63.5
Q ss_pred HHHHhHHHHHHHhcCChHHHHHHHHHHHhhC-------CcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIIS-------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+.-.+.+|..++..++|..|+..+++|++.. +..+..+.++|.+++++|++++|+..+++|++++|.+..+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 3446678899999999999999999999874 4568899999999999999999999999999999998765
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.29 E-value=5.1e-06 Score=84.57 Aligned_cols=97 Identities=10% Similarity=-0.114 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcch
Q 011092 383 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~ 454 (494)
.++.+++.+|..++. .+++++|++.|++|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 567888999999998 89999999999999876 3 56888889999988 78999999999999775 588
Q ss_pred HHHHHHHHHHHH----CCChHHHHHHHHHhhccc
Q 011092 455 IASYLQAAALSA----MGMENEAQVALKEGTTLE 484 (494)
Q Consensus 455 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 484 (494)
.+++++|.+|.. .+++++|++.|++|++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999988 889999999999998763
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.26 E-value=2.1e-06 Score=71.34 Aligned_cols=81 Identities=12% Similarity=-0.006 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcC-CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 384 ETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
+.+..++.|..+.+.+ ++++|+..+++.++.+ |....++++++|..|+++|+|++|+..++++|+++|++.+|..-
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4678889999999877 7889999999999999 74368999999999999999999999999999999999998877
Q ss_pred HHHHH
Q 011092 460 QAAAL 464 (494)
Q Consensus 460 ~g~~~ 464 (494)
+-.+-
T Consensus 111 k~~ie 115 (152)
T 1pc2_A 111 ERLID 115 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.23 E-value=4.1e-06 Score=69.43 Aligned_cols=80 Identities=18% Similarity=0.034 Sum_probs=71.6
Q ss_pred hcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH----CCChHHH
Q 011092 398 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 473 (494)
Q Consensus 398 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 473 (494)
.+|+++|++.|++|.+.... .. . +|.+|...+.+++|+..|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-TH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 46899999999999998755 33 3 889999999999999999999987 789999999999999 8999999
Q ss_pred HHHHHHhhccc
Q 011092 474 QVALKEGTTLE 484 (494)
Q Consensus 474 ~~~~~~al~l~ 484 (494)
+.+|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999998763
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.22 E-value=4.8e-06 Score=80.44 Aligned_cols=137 Identities=11% Similarity=0.131 Sum_probs=79.2
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC--CCCCccEEE------EEecCCccceeee
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLG------CCCEGDERLLVAE 136 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~------~~~~~~~~~lv~e 136 (494)
+..++.|..+.||+....+| .+++|+... ....+..|..++..|. .-.+++++. +....+..+++|+
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34556677899999987655 588999865 2344555666666553 112344443 1123556789999
Q ss_pred cCCCCCHH--------------HHhccc-CCC--C---------CCHHHH------------------------------
Q 011092 137 YMPNETLA--------------KHLFHW-ETH--P---------MKWAMR------------------------------ 160 (494)
Q Consensus 137 ~~~~gsL~--------------~~l~~~-~~~--~---------l~~~~~------------------------------ 160 (494)
|++|.++. ..++.. ... + ..|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 011110 000 0 122111
Q ss_pred -HHHHHHHHHHHHHHHh-------------cCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 161 -LRVVLHLAQALEYCTS-------------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 161 -~~i~~~i~~~l~~lH~-------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
..+...+..++.+|+. .+ ++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345666652 34 9999999999999888899999999764
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.17 E-value=7.5e-06 Score=65.46 Aligned_cols=94 Identities=12% Similarity=0.026 Sum_probs=79.0
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHH---HHHHHHHHHhhC-C-cchHHHHHHHHHHHHCCChH
Q 011092 397 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQD---ALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMEN 471 (494)
Q Consensus 397 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~ 471 (494)
.......+.+.|.+++..++. +....++.|.++.+..+... +|..++..++-+ | ..-+.+|.+|..++++|+|+
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 334556677888888887776 78889999999998877666 999999998887 6 67789999999999999999
Q ss_pred HHHHHHHHhhcccccccccc
Q 011092 472 EAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 472 ~A~~~~~~al~l~~~~~~a~ 491 (494)
+|+.+++..|+++|.+..|.
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999887653
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.13 E-value=5.3e-06 Score=83.61 Aligned_cols=96 Identities=10% Similarity=-0.078 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC-----ChHHHHHHHHHHHhhCCcc
Q 011092 382 MQETLNSKKKGDVA---FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----MPQDALNDAMQAQIISPIW 453 (494)
Q Consensus 382 ~~~~~~~~~~g~~~---~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~al~l~p~~ 453 (494)
..++.+++..|..+ ...+++++|++.|++|++.. ++.+++++|.+|.. | ++++|+..|++|+ |.+
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~~-G~g~~~d~~~A~~~~~~Aa---~g~ 317 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYYE-GKWVPADAKAAEAHFEKAV---GRE 317 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH-CSSSCCCHHHHHHHHHTTT---TTC
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHc-CCCCCCCHHHHHHHHHHHh---CCC
Confidence 34566777777773 46788888888888887653 56777888888874 5 8888888888887 888
Q ss_pred hHHHHHHHHHHHH----CCChHHHHHHHHHhhccc
Q 011092 454 HIASYLQAAALSA----MGMENEAQVALKEGTTLE 484 (494)
Q Consensus 454 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 484 (494)
+.+++++|.+|.. ..++++|+.+|++|.+.+
T Consensus 318 ~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 318 VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 8888888887776 348888888888887643
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.4e-05 Score=88.10 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 450 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~ 450 (494)
.....|++.|.++.+.|+|++|+++|.+| + ++..|.+.+.++.++|+|++|++.+..|++.+
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 44556666666666666666666666655 3 55666666666666666666666666655444
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.05 E-value=3.4e-05 Score=76.68 Aligned_cols=101 Identities=10% Similarity=0.008 Sum_probs=76.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-----CcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh------CCcchHH
Q 011092 388 SKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWHIA 456 (494)
Q Consensus 388 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~~a 456 (494)
....|..+...|++++|++.|++++...+. ....++.++|.+|...|+|++|+..+++++.. .|..+.+
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~ 177 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDV 177 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 334455555566666666666666654221 13567888999999999999999999998866 4556789
Q ss_pred HHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 457 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 457 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
+...|.+|..+|+|++|...|++|+.+.+...
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 209 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAANSIY 209 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999998876554
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.7e-05 Score=72.26 Aligned_cols=75 Identities=15% Similarity=0.068 Sum_probs=60.2
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC---CCCCccEEEEEecCCccceeeecCCCC
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
+..++.|....+|+... ++..++||+.... ....|..|+..|+.|. ...+++++.++...+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45668899999999886 4678889987543 2567889999999883 356889999988878899999999987
Q ss_pred CH
Q 011092 142 TL 143 (494)
Q Consensus 142 sL 143 (494)
++
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.9e-05 Score=74.37 Aligned_cols=76 Identities=21% Similarity=0.228 Sum_probs=57.2
Q ss_pred ccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-C--CCCccEEEEEecCCccceeeecCCC
Q 011092 64 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N--NRLTNLLGCCCEGDERLLVAEYMPN 140 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--pnIv~l~~~~~~~~~~~lv~e~~~~ 140 (494)
-+..+|.|..+.||+....+|+.|.||+...........|.+|+..|+.|. . --+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 356678999999999999999999999876554444556889999999884 2 2355666553 34899999987
Q ss_pred CCH
Q 011092 141 ETL 143 (494)
Q Consensus 141 gsL 143 (494)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.94 E-value=8e-05 Score=70.01 Aligned_cols=62 Identities=11% Similarity=-0.066 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCC--CCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCC
Q 011092 389 KKKGDVAFRQKDLKDAIECYTQFIDAGT--MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 451 (494)
Q Consensus 389 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p 451 (494)
+..|.++...|++++|++.+.++|..+| . +..++...+.+|.++|+.+.|.+.+++..+.+|
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 3444444444555555555554444443 3 444444444444444444444444444444444
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.93 E-value=2.5e-05 Score=86.18 Aligned_cols=63 Identities=16% Similarity=0.111 Sum_probs=59.3
Q ss_pred cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 419 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
.+.+|++.|.++...|++++|+..|.+| +++.+|++.|.++.++|+|++|+++|..|.+.++.
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 6788999999999999999999999887 89999999999999999999999999999988744
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.91 E-value=2.9e-05 Score=76.47 Aligned_cols=94 Identities=10% Similarity=-0.014 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..|..+|..+++.|+|++|++.|.+| . ++..|...+.++...|+++.|..+..+ |..+|++ ...+..
T Consensus 146 ~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~ 215 (449)
T 1b89_A 146 NNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELIN 215 (449)
T ss_dssp HHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHH
T ss_pred HHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHH
Confidence 45578888899999999999999999988 3 566677777777777777777665553 4455555 335667
Q ss_pred HHHHCCChHHHHHHHHHhhccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
+|...|++++|+..|++++.+++.
T Consensus 216 ~Yek~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 216 YYQDRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HHHHTTCHHHHHHHHHHHTTSTTC
T ss_pred HHHHCCCHHHHHHHHHHHhCCcHH
Confidence 788888888888888888888754
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.87 E-value=4.1e-05 Score=76.05 Aligned_cols=101 Identities=11% Similarity=-0.031 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc-----
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----- 453 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~----- 453 (494)
+..+...|..+...|+|++|+..+.+++.. .+. ...++.+.+.+|..+|++++|...+++|+.+.+..
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 213 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPS-LVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQ 213 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchH
Confidence 567889999999999999999999999865 222 46789999999999999999999999999875332
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 454 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 454 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
...+...|.++...++|++|..+|.++++..+.
T Consensus 214 ~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 214 TVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 456778899999999999999999999876443
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.87 E-value=7.5e-05 Score=74.34 Aligned_cols=74 Identities=15% Similarity=0.198 Sum_probs=46.4
Q ss_pred ccccCCCCCCCeEEEEEEcCCCEEEEEEecCC----CC--C---ChHHHHHHHHHHh-ccCCCCCccEEEEEecCCccce
Q 011092 64 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM----AW--P---DPRQFLEEARSVG-QLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~--~---~~~~~~~E~~~l~-~l~hpnIv~l~~~~~~~~~~~l 133 (494)
-+..+|.|..+.||+... ++..++||..... .. . ....+..|+..+. ......+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 456678899999999964 4678999943221 11 1 2233444443322 12335677788776 466799
Q ss_pred eeecC-CC
Q 011092 134 VAEYM-PN 140 (494)
Q Consensus 134 v~e~~-~~ 140 (494)
||||+ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 86
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=8.3e-05 Score=71.07 Aligned_cols=160 Identities=12% Similarity=0.133 Sum_probs=92.6
Q ss_pred ccccCHHHHHHHhcCCccc--cccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCC--Cc
Q 011092 44 FREFTLEQLKNATSGFAVE--NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR--LT 119 (494)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~--~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv 119 (494)
+..++.+++......|... .-+..++.|....+|+....+| .+++|...... ....+..|+.++..+...+ ++
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 3457778888888777642 2345667788899999987665 68899886531 2345667888887773212 33
Q ss_pred cEEEE------EecCCccceeeecCCCCCHHH--------------HhcccC-C--CC----CC---HHHHHH-------
Q 011092 120 NLLGC------CCEGDERLLVAEYMPNETLAK--------------HLFHWE-T--HP----MK---WAMRLR------- 162 (494)
Q Consensus 120 ~l~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~-~--~~----l~---~~~~~~------- 162 (494)
+++.. ....+..+++|+|++|.++.. .++... . .+ .. |.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 33321 112345689999999865321 011100 0 00 11 221100
Q ss_pred -----HHHHHHHHHHHHHh-------cCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 163 -----VVLHLAQALEYCTS-------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 163 -----i~~~i~~~l~~lH~-------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
+...+...+..++. .+ ++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00123445555553 23 8999999999999987666899999764
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.86 E-value=7e-05 Score=62.54 Aligned_cols=96 Identities=7% Similarity=-0.054 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--------cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhC---C-
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS---P- 451 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~---p- 451 (494)
....+++....++..|.|+.|+-..+.++.+..++ .+..+...|.+++..++|.+|...|++||.+. +
T Consensus 19 ~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k 98 (167)
T 3ffl_A 19 SHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSK 98 (167)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhc
Confidence 34577888889999999999999999987664331 12367888899999999999999999987542 1
Q ss_pred ---------------------cchHHHHHHHHHHHHCCChHHHHHHHHH
Q 011092 452 ---------------------IWHIASYLQAAALSAMGMENEAQVALKE 479 (494)
Q Consensus 452 ---------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 479 (494)
.+.+.-|.++.||.+++++++|+..++.
T Consensus 99 ~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 99 TSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236889999999999999999999875
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.80 E-value=9.8e-05 Score=69.42 Aligned_cols=100 Identities=10% Similarity=-0.084 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-----CCcHHHHhHHHHHHHhcC--ChHHHHHHHHHHHhhCCc--c
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-----MVSPTVYARRSLCYLMSD--MPQDALNDAMQAQIISPI--W 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~l~p~--~ 453 (494)
...+.+...+..+.+.|+.+.|.+.+.++.+.+| ++....+..-+.+....| ++++|+..|+++.+..|+ .
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 5677888889999999999999999999999999 312222322244455556 999999999999999898 3
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHhhcccc
Q 011092 454 HIASYLQAAALSAMGMENEAQVALKEGTTLEA 485 (494)
Q Consensus 454 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 485 (494)
...+++ +++.+|++++|.+.++..+++.|
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~p 242 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDYY 242 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHHH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhcc
Confidence 445555 89999999999999999888853
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00021 Score=62.73 Aligned_cols=142 Identities=12% Similarity=0.031 Sum_probs=94.1
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCCeEEcccCCcccCCCCCccccCC
Q 011092 141 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 219 (494)
Q Consensus 141 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 219 (494)
-||.++|.. .+.+++++++|.++.|.+.+|.-+-. +. -..+=+.|..|++..+|.|...+ +.+ .....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~ 101 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEP 101 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------ccccc
Confidence 479999875 35799999999999999999877622 22 11233457999999999987763 111 11233
Q ss_pred CcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHHccC-
Q 011092 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY- 298 (494)
Q Consensus 220 ~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~- 298 (494)
.+.+||... ...+.+.=|||||+++|.-+--..|... +..+++.|.+||..|...
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e-----------------------E~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE-----------------------ERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE-----------------------EECCCHHHHHHHHHHTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc-----------------------chhhCHHHHHHHHHHHhcc
Confidence 567888764 3456677899999999998876543221 223446788888888765
Q ss_pred ------------------------CCCCCCChHHHHHHhcccc
Q 011092 299 ------------------------EPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 299 ------------------------dp~~Rps~~~vl~~L~~~~ 317 (494)
.+..|++.++|++....-.
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl 200 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHL 200 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHHTTS
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHHhhc
Confidence 3467889999988776543
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0003 Score=67.26 Aligned_cols=98 Identities=18% Similarity=0.165 Sum_probs=62.9
Q ss_pred ccccCHHHHHHHhcCCccc--cccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCC--CCc
Q 011092 44 FREFTLEQLKNATSGFAVE--NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNN--RLT 119 (494)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~--~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv 119 (494)
+..++.+.+......+... .-+..++ |....||+....+|+.+++|...... .....+..|..++..+... .++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 4567777777776555422 1233456 77889999887677789999986432 2456777888888888422 244
Q ss_pred cEEEE-----EecCCccceeeecCCCCCH
Q 011092 120 NLLGC-----CCEGDERLLVAEYMPNETL 143 (494)
Q Consensus 120 ~l~~~-----~~~~~~~~lv~e~~~~gsL 143 (494)
+++.. ...++..+++|++++|.++
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCC
Confidence 44443 1123455789999997543
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.70 E-value=4e-05 Score=75.45 Aligned_cols=87 Identities=16% Similarity=0.032 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Q 011092 386 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 465 (494)
Q Consensus 386 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 465 (494)
.+|...|..++..|+|++|+.+|+++ + .|.+++.|+.++|+|++|++.+.+| .++..|...+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a----~-----n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV----S-----NFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT----T-----CHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh----h-----hHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 49999999999999999999999988 2 3889999999999999999999999 47899999999999
Q ss_pred HCCChHHHHHHHHHhhcccccc
Q 011092 466 AMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 466 ~~~~~~~A~~~~~~al~l~~~~ 487 (494)
.+|+++.|..+... |.++|+.
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhh
Confidence 99999999877664 4455543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.70 E-value=7.6e-05 Score=71.53 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.++..+...|..+...|++++|+..+++|++++|+ ..+|..+|.++...|++++|++.|++|+.++|.....++
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 45667777788888889999999999999999975 677889999999999999999999999999999865333
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=7.5e-05 Score=74.33 Aligned_cols=86 Identities=12% Similarity=-0.029 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh---
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--- 449 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l--- 449 (494)
....+..+.++|.+|..+|+|++|+..|.++|++ .|+ -...++|+|.+|..+|++++|+..+++|+++
T Consensus 325 h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 325 NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3467888999999999999999999999999965 333 4567999999999999999999999999976
Q ss_pred --CCcc---hHHHHHHHHHHHHC
Q 011092 450 --SPIW---HIASYLQAAALSAM 467 (494)
Q Consensus 450 --~p~~---~~a~~~~g~~~~~~ 467 (494)
-|++ .+.+.+++.++..+
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHH
Confidence 3555 44566677666543
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00023 Score=65.51 Aligned_cols=105 Identities=10% Similarity=-0.045 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHH------hcCHHHHHHH-----HHHHH-hcCCCCcHHHHhHHHHHHHh---c--C------ChHH
Q 011092 382 MQETLNSKKKGDVAFR------QKDLKDAIEC-----YTQFI-DAGTMVSPTVYARRSLCYLM---S--D------MPQD 438 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~------~~~~~~A~~~-----~~~ai-~~~p~~~~~~~~~~~~~~~~---~--~------~~~~ 438 (494)
...+..++.+|..|.. ...|.++++. +.+++ +.+|+ +..+++-.|..... . | ....
T Consensus 103 ~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~ 181 (301)
T 3u64_A 103 YSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHA 181 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHH
Confidence 3455666666666532 2455555543 45555 34566 67766666665533 2 2 2567
Q ss_pred HHHHHHHHHhhCCc--chHHHHHHHHHHHHC-----CChHHHHHHHHHhhcccccc
Q 011092 439 ALNDAMQAQIISPI--WHIASYLQAAALSAM-----GMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 439 A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----~~~~~A~~~~~~al~l~~~~ 487 (494)
|...+++|+++||+ +..+|..+|..|... |+.++|.+.|++||+|+|+.
T Consensus 182 A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 182 AVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999 566999999999996 99999999999999999964
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=7.6e-05 Score=74.21 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh---
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--- 449 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l--- 449 (494)
....+..+.++|.+|..+|+|++|+..|+++|++ .|+ -...++|+|.+|..+|+|++|+..+++|+++
T Consensus 336 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 336 NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999999999999965 344 5677999999999999999999999999976
Q ss_pred --CCcchH
Q 011092 450 --SPIWHI 455 (494)
Q Consensus 450 --~p~~~~ 455 (494)
-|+++.
T Consensus 415 ~lG~~Hp~ 422 (433)
T 3qww_A 415 AHGKDHPY 422 (433)
T ss_dssp HTCTTCHH
T ss_pred HcCCCChH
Confidence 366654
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00029 Score=67.60 Aligned_cols=137 Identities=9% Similarity=-0.018 Sum_probs=72.9
Q ss_pred ccCCCCCCCe-EEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-C-CCCccEEEEEecCCccceeeecCCCCC
Q 011092 66 SEHGEKAPNV-VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N-NRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 66 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-pnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
..++.|.... +|+....+|..+++|....... ..+..|+.++..+. + -.+++++.+....+ +++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3444444443 6677654467787876543221 23456777777773 2 23567777654333 78999998777
Q ss_pred HHHHhccc---------------------CC---CCCCHHHHH-------HHH-------------HHHHHHHHHHH---
Q 011092 143 LAKHLFHW---------------------ET---HPMKWAMRL-------RVV-------------LHLAQALEYCT--- 175 (494)
Q Consensus 143 L~~~l~~~---------------------~~---~~l~~~~~~-------~i~-------------~~i~~~l~~lH--- 175 (494)
+.+.+... .. ..++..... .+. ..+...+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65443210 00 012221110 000 01111222221
Q ss_pred ---hcCCcccccccccceeecCC----CCeEEcccCCccc
Q 011092 176 ---SKGRALYHDLNAYRILFDED----GNPRLSTFGLMKN 208 (494)
Q Consensus 176 ---~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgla~~ 208 (494)
... ++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~-lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMV-FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCE-EECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCe-eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123 8999999999999874 6789999998764
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00019 Score=67.84 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=45.2
Q ss_pred cccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCC-ccEEEEEecCCccceeeecC-CCCC
Q 011092 65 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYM-PNET 142 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lv~e~~-~~gs 142 (494)
+..++.|..+.+|+. ..+++|+....... .-...+|+.+++.+...++ .++++++ .+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 455677888999998 46888988653211 1123568888887743233 5666654 33458999999 7655
Q ss_pred H
Q 011092 143 L 143 (494)
Q Consensus 143 L 143 (494)
|
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0003 Score=68.61 Aligned_cols=138 Identities=15% Similarity=0.200 Sum_probs=83.7
Q ss_pred cccCCCCCCCeEEEEEEc--------CCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceee
Q 011092 65 VSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+..+..|-...+|+.... ++..|++|+.... ......+.+|..+++.+. +.-..++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 345666888899999864 2478999986332 224556778999998883 4334677777654 2999
Q ss_pred ecCCCCCHHHH--------------h---cccC---CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 011092 136 EYMPNETLAKH--------------L---FHWE---THPMK--WAMRLRVVLHLAQ-------------------ALEYC 174 (494)
Q Consensus 136 e~~~~gsL~~~--------------l---~~~~---~~~l~--~~~~~~i~~~i~~-------------------~l~~l 174 (494)
||++|.+|..- | +... .++.. +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665321 0 1000 11222 4455555544422 23333
Q ss_pred H----hcC---CcccccccccceeecCC----CCeEEcccCCcc
Q 011092 175 T----SKG---RALYHDLNAYRILFDED----GNPRLSTFGLMK 207 (494)
Q Consensus 175 H----~~~---~ivH~Dlkp~Nill~~~----~~~kl~Dfgla~ 207 (494)
. ..+ .++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 3 221 18999999999999876 789999999764
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00081 Score=66.91 Aligned_cols=73 Identities=15% Similarity=0.265 Sum_probs=51.5
Q ss_pred cccCCCCCCCeEEEEEEcC--------CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCC-CccEEEEEecCCccceee
Q 011092 65 VSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~~~~~lv~ 135 (494)
+..++.|-...||+....+ +..|++|+.... .....+..|..++..+...+ .+++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4566778889999998753 478999988432 12256778999999884333 4677776643 3899
Q ss_pred ecCCCCCH
Q 011092 136 EYMPNETL 143 (494)
Q Consensus 136 e~~~~gsL 143 (494)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987554
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0012 Score=66.13 Aligned_cols=74 Identities=14% Similarity=0.062 Sum_probs=48.3
Q ss_pred cccCCCCCCCeEEEEEEcC-CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCC-ccEEEEEecCCccceeeecCCCCC
Q 011092 65 VSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
+..|+.|-...+|+....+ +..|++|+....... .-...+|..++..|...++ +++++.+.. .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3456778889999998765 478889987543211 1112578999998865444 567877732 35999999755
Q ss_pred H
Q 011092 143 L 143 (494)
Q Consensus 143 L 143 (494)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0012 Score=63.58 Aligned_cols=68 Identities=7% Similarity=-0.004 Sum_probs=44.4
Q ss_pred CCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC---CCCCccEEEE------EecCCccceeeecCC
Q 011092 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGC------CCEGDERLLVAEYMP 139 (494)
Q Consensus 69 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~------~~~~~~~~lv~e~~~ 139 (494)
|.|....||+....+| .+++|+...... ..|+.++..|. -|++++++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 5555789999987677 899998765431 34566666552 2224454432 223466789999999
Q ss_pred CCCH
Q 011092 140 NETL 143 (494)
Q Consensus 140 ~gsL 143 (494)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00083 Score=53.61 Aligned_cols=80 Identities=11% Similarity=-0.056 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHhcCHHH---HHHHHHHHHhcC-CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKD---AIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...-++.|..+...++-.. +|..++..+..+ |...-++.+.+|..++++|+|++|...++..|++.|++.+|.--+
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4567777888877766665 999999999987 633778999999999999999999999999999999999988766
Q ss_pred HHHH
Q 011092 461 AAAL 464 (494)
Q Consensus 461 g~~~ 464 (494)
..+-
T Consensus 115 ~~i~ 118 (126)
T 1nzn_A 115 RLID 118 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0021 Score=52.16 Aligned_cols=76 Identities=5% Similarity=-0.177 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
...-++.|..+.+..+ -.++|..++..+...|...-++.+.+|..++++|+|++|...++..|++.|++.+|.--+
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 3444444545444332 334555555555555533445555555555555555555555555555555555544433
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=52.57 Aligned_cols=79 Identities=5% Similarity=-0.168 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
+..-++.|..+.+.+ +..++|..++..++.+|...-++++.+|..+.++|+|++|...++..|++.|++.+|.--+.
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 345555555555433 34456666666666666434566666666666666666666666666666666666655444
Q ss_pred HH
Q 011092 462 AA 463 (494)
Q Consensus 462 ~~ 463 (494)
.+
T Consensus 120 ~I 121 (134)
T 3o48_A 120 MV 121 (134)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00075 Score=65.73 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=45.7
Q ss_pred cccCCCCCCCeEEEEEEcC---------CCEEEEEEecCCCCCChHHHHHHHHHHhccCCCC-CccEEEEEecCCcccee
Q 011092 65 VSEHGEKAPNVVYKGKLEN---------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERLLV 134 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~~~~~lv 134 (494)
+..++.|....+|+....+ +..+++|+...... .......|..++..+...+ ++++++... -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEE
Confidence 4566788889999998654 26888888754321 1112357888888884333 457776542 3789
Q ss_pred eecCCCCCH
Q 011092 135 AEYMPNETL 143 (494)
Q Consensus 135 ~e~~~~gsL 143 (494)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999997644
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 494 | ||||
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-41 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-41 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 9e-41 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-40 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-40 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-39 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 9e-39 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-38 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-37 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 8e-36 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 3e-35 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-35 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-35 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 7e-35 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-35 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-34 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-34 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 5e-34 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-33 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 8e-33 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-32 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 3e-32 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-32 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-32 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 7e-32 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 7e-31 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 8e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 8e-31 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 6e-30 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-29 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 5e-29 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-28 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-28 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 5e-28 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-27 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-27 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 9e-27 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 9e-27 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 8e-26 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-25 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-25 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-24 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-24 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 5e-24 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-23 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-23 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-22 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-22 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-22 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-22 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-22 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-21 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-20 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 9e-20 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-17 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-16 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-15 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-13 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 8e-07 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 9e-07 | |
| d1p5qa1 | 170 | a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal d | 3e-04 | |
| d2fbna1 | 153 | a.118.8.1 (A:22-174) Putative 70 kda peptidylproly | 3e-04 | |
| d1hh8a_ | 192 | a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF- | 7e-04 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 8e-04 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 8e-04 | |
| d1kt1a1 | 168 | a.118.8.1 (A:254-421) FKBP51, C-terminal domain {M | 0.001 | |
| d1elwa_ | 117 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 0.003 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 1e-41
Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
+V+ G N+ ++A+K A + F+EEA + +L + +L L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
E+M + L+ + + L + L + + + Y ++ DL A L E
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGE 136
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+ ++S FG+ + D + S+ + + PE R + +S ++SFG L+ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
S IP + + + + T + ++ + C + P +RP L
Sbjct: 197 SEGKIPYEN----RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 310 VTALSPLQK 318
+ L+ + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 2e-41
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VV GK Q +A+K + + +F+EEA+ + L + +L L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
EYM N L +L H + L + + +A+EY SK L+ DL A L ++
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVND 135
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
G ++S FGL + D + S+ + ++PPE L + + +S I++FG L+ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
S +P + L ++ + C + ERP K L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 310 VTAL 313
++ +
Sbjct: 252 LSNI 255
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (367), Expect = 9e-41
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+ +++ FGL + D + + + +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 250 SGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
+ IP + + + D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 305 NPKSLVTALSPLQKETE 321
L + L TE
Sbjct: 256 TFDYLRSVLEDFFTATE 272
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 4e-40
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 12/256 (4%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
EYM +L L ++ + + +A + Y ++ DL A IL E
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGE 148
Query: 195 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
+ +++ FGL + D + + + +T PE GR T +S ++SFG LL +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ +P + +R + + + L L +C + EP ERP + L
Sbjct: 209 TKGRVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 310 VTALSPLQKETEVPSH 325
L TE
Sbjct: 265 QAFLEDYFTSTEPQYQ 280
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (359), Expect = 9e-40
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 20/251 (7%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-L 133
V G ++AVK A + FL EA + QLR++ L LLG E L +
Sbjct: 22 DVMLGDYRG-NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V EYM +L +L + L+ L + +A+EY ++ DL A +L
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVS 137
Query: 194 EDGNPRLSTFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
ED ++S FGL K S + + +T PE LR + + +S ++SFG LL ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 253 HIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307
+P + + D C + + C + RP+
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFL 248
Query: 308 SLVTALSPLQK 318
L L ++
Sbjct: 249 QLREQLEHIKT 259
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 141 bits (357), Expect = 3e-39
Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 12/258 (4%)
Query: 75 VVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
+ E+M L +L + + L + ++ A+EY K ++ DL A L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 194 EDGNPRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
E+ +++ FGL + + + +T PE L + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 249 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 308
+ P +DL + L + + + ++ L C Q+ P +RP+
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 309 LVTALSPLQKETEVPSHV 326
+ A + +E+ + V
Sbjct: 266 IHQAFETMFQESSISDEV 283
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 140 bits (354), Expect = 9e-39
Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 26/292 (8%)
Query: 47 FTLEQLKNATSGFAVENIVSEH------GEKAPNVVYKGKL----ENQRRIAVKRFNRMA 96
FT E A FA E +S G V G L + + +A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 97 WPDP-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 155
R FL EA +GQ + + +L G + +++ E+M N +L
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 156 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 215
+ ++ +A ++Y ++ DL A IL + + ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 216 STN---------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 266
T + +T PE ++ + T S ++S+G ++ +++S P + ++
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 267 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318
++ + D + L +L C Q + RP +V L + +
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 4e-38
Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134
VYKGK + + + F E + + R+ + +G + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 81
Query: 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 194
++ +L HL ET + + + AQ ++Y +K ++ DL + I E
Sbjct: 82 TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHE 139
Query: 195 DGNPRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRT---GRVTPESVIYSFGTLL 245
D ++ FGL +K+ G L+ + PE +R + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 246 LDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
+L++G+ +I + + R S + + RL + CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRD 255
Query: 302 ERPNPKSLVTALSPLQKE 319
ERP ++ ++ L +
Sbjct: 256 ERPLFPQILASIELLARS 273
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (342), Expect = 3e-37
Identities = 55/272 (20%), Positives = 100/272 (36%), Gaps = 25/272 (9%)
Query: 45 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDP--- 100
R++ LE + I G+ VY + +++ +A+K +
Sbjct: 1 RQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 50
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
Q E LR+ + L G + L+ EY P T+ + L
Sbjct: 51 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRT 108
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 218
+ LA AL YC SK ++ D+ +L G +++ FG ++ + +
Sbjct: 109 ATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 167
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
L + PPE + + ++S G L + L GK ++ R + +E
Sbjct: 168 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEF 221
Query: 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
F D L SR L++ P +RP + ++
Sbjct: 222 TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 8e-36
Identities = 55/268 (20%), Positives = 100/268 (37%), Gaps = 30/268 (11%)
Query: 75 VVYKGKLENQ---RRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V KG + + + +AVK A + L EA + QL N + ++G C E +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
+LV E L K+L + +K + +V ++ ++Y ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARN 137
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFG 242
+L ++S FGL K R ++Y + + PE + + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 243 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
L+ + S P S ++ C E+ L + C
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248
Query: 298 YEPRERPNPKSLVTALSPLQKETEVPSH 325
Y+ RP ++ L + H
Sbjct: 249 YDVENRPGFAAVELRLRNYYYDVVNEGH 276
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 3e-35
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 36/265 (13%)
Query: 75 VVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
+VY+G E + R+A+K N A + +FL EA + + + + LLG +
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 128 GDERLLVAEYMPNETLAKHLFHW--------ETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
G L++ E M L +L P + +++ +A + Y +
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVT 233
++ DL A + ED ++ FG+ ++ + Y + + PE L+ G T
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 234 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288
S ++SFG +L ++ + P L + + L D+C + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 289 VRLASRCLQYEPRERPNPKSLVTAL 313
L C QY P+ RP+ +++++
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 4e-35
Identities = 52/277 (18%), Positives = 98/277 (35%), Gaps = 44/277 (15%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
VV+K + +A K + P Q + E + + + + + G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
+ E+M +L + L + + + +V + + + L Y K + ++ D+ IL
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
+ G +L FG+ D + S ++ PE L+ + +S I+S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 251 GKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT----------------------- 286
G++ IPP A +L Q+ D+ G
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 287 --------------ELVRLASRCLQYEPRERPNPKSL 309
E ++CL P ER + K L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 131 bits (330), Expect = 4e-35
Identities = 48/243 (19%), Positives = 85/243 (34%), Gaps = 14/243 (5%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY + + N +A+K+ + + ++E R + +LR+ GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
LV EY H P++ V Q L Y S ++ D+ A I
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNI 146
Query: 191 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLD 247
L E G +L FG S+ + PE + G+ + ++S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 248 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307
L K + Q + + G +++ CLQ P++RP +
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262
Query: 308 SLV 310
L+
Sbjct: 263 VLL 265
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 7e-35
Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 28/255 (10%)
Query: 75 VVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
K + + + + K + M + + + E + +L++ + +
Sbjct: 19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78
Query: 132 LL--VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH---- 183
L V EY LA + E + LRV+ L AL+ C + +
Sbjct: 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138
Query: 184 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIY 239
DL + D N +L FGL + S++ TP PE + +S I+
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198
Query: 240 SFGTLLLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295
S G LL +L + IR+ + + + EL + +R
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRM 249
Query: 296 LQYEPRERPNPKSLV 310
L + RP+ + ++
Sbjct: 250 LNLKDYHRPSVEEIL 264
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (326), Expect = 9e-35
Identities = 61/284 (21%), Positives = 105/284 (36%), Gaps = 50/284 (17%)
Query: 75 VVYKGKL------ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCE 127
V++ + E +AVK A D F EA + + N + LLG C
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 128 GDERLLVAEYMPNETLAKHLFHWETH----------------------PMKWAMRLRVVL 165
G L+ EYM L + L H P+ A +L +
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 166 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 219
+A + Y + + ++ DL L E+ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 220 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 274
+ PPE + R T ES ++++G +L ++ S P + +RD N+ ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318
C EL L C P +RP+ S+ L + +
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (326), Expect = 1e-34
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 26/262 (9%)
Query: 75 VVYKGKLENQRR----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 130 ER-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
L+V YM + L ++ ETH + L +A+ +++ SK ++ DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAAR 159
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYS 240
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ---FTDDDGTELVRLASRCLQ 297
FG LL +L++ P D N +T L+G+ + L + +C
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 298 YEPRERPNPKSLVTALSPLQKE 319
+ RP+ LV+ +S +
Sbjct: 273 PKAEMRPSFSELVSRISAIFST 294
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 2e-34
Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 15/256 (5%)
Query: 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
I+ E G+ A VYK + E A K + + + ++ E + + + LL
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
+ ++ E+ + + E P+ + V AL Y ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNK-IIH 133
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST----NLAFTPPEYLRT-----GRVT 233
DL A ILF DG+ +L+ FG+ + + PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 234 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++ ++S G L+++ + PP H L+ + L++ +
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPM-RVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 294 RCLQYEPRERPNPKSL 309
+CL+ R L
Sbjct: 251 KCLEKNVDARWTTSQL 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 5e-34
Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 28/255 (10%)
Query: 75 VVYKGKL---ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V +G + Q +A+K + D + + EA+ + QL N + L+G C + +
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
+LV E L K L + + ++ ++ ++Y K ++ DL A +
Sbjct: 83 LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNV 140
Query: 191 LFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGT 243
L ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 244 LLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298
+ + LS P + I C EL L S C Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251
Query: 299 EPRERPNPKSLVTAL 313
+ +RP+ ++ +
Sbjct: 252 KWEDRPDFLTVEQRM 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 1e-33
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 15/272 (5%)
Query: 46 EFTLEQLKNATSGFAVEN---IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPR 101
E LE+L++ S + + G+ A VY + + +A+++ N P
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+ E + + +N + N L GDE +V EY+ +L + M
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIA 119
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 221
V QALE+ S ++ D+ + IL DG+ +L+ FG +S + +
Sbjct: 120 AVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178
Query: 222 TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 277
TP PE + P+ I+S G + ++++ G+ PP + +R + T+ E
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALY-LIATNGTPE 235
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
Q + +RCL + +R + K L
Sbjct: 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 3e-33
Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 41/275 (14%)
Query: 75 VVYKGKLENQRR------IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNR-LTNLLGCCC 126
V + +AVK A R+ + E + + QL ++ + NLLG C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 127 EGDERLLVAEYMPNETLAKHLF---------------------HWETHPMKWAMRLRVVL 165
L+ EY L +L + + + + L
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 166 HLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A+ +E+ K H DL A +L ++ FGL ++ +Y
Sbjct: 172 QVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 229
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ + PE L G T +S ++S+G LL ++ S P + D N L + +
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKM 286
Query: 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
E+ + C ++ R+RP+ +L + L
Sbjct: 287 DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 8e-33
Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 33/270 (12%)
Query: 75 VVYKGKLEN---QRRIAVKRFNRMAWPDP-RQFLEEARSVGQLRNNR-LTNLLGCCCEGD 129
V K +++ + A+KR A D R F E + +L ++ + NLLG C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 130 ERLLVAEYMPNETLAKHL--------------FHWETHPMKWAMRLRVVLHLAQALEYCT 175
L EY P+ L L + + L +A+ ++Y +
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 176 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRV 232
K ++ DL A IL E+ +++ FGL + + + + E L
Sbjct: 145 QKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 233 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG---QFTDDDGTELV 289
T S ++S+G LL +++S P L + +G + + E+
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVY 256
Query: 290 RLASRCLQYEPRERPNPKSLVTALSPLQKE 319
L +C + +P ERP+ ++ +L+ + +E
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 1e-32
Identities = 44/259 (16%), Positives = 97/259 (37%), Gaps = 19/259 (7%)
Query: 75 VVYKGKL-----ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG + + +A+K P ++ L+EA + + N + LLG C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+L+ + MP L + + L + +A+ + Y + ++ DL A
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAAR 140
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFG 242
+L + +++ FGL K + + + E + T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 243 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +L++ P D I + + + ++ + +C +
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 303 RPNPKSLVTALSPLQKETE 321
RP + L+ S + ++ +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 3e-32
Identities = 51/260 (19%), Positives = 102/260 (39%), Gaps = 19/260 (7%)
Query: 75 VVYKGKLEN-----QRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEG 128
VYKG L+ + +A+K R FL EA +GQ ++ + L G +
Sbjct: 22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+++ EYM N + + ++ +A ++Y + + DL A
Sbjct: 82 KPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAAR 139
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSF 241
IL + + ++S FGL + D + + +T PE + + T S ++SF
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G ++ ++++ P + + + + D + + +L +C Q E
Sbjct: 200 GIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA 255
Query: 302 ERPNPKSLVTALSPLQKETE 321
RP +V+ L L + +
Sbjct: 256 RRPKFADIVSILDKLIRAPD 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 3e-32
Identities = 53/276 (19%), Positives = 96/276 (34%), Gaps = 34/276 (12%)
Query: 75 VVYKGKL------ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNR-LTNLLGCCC 126
V + + +AVK A R+ + E + + L N+ + NLLG C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 127 EGDERLLVAEYMPNETLAKHLFHW----------------ETHPMKWAMRLRVVLHLAQA 170
G L++ EY L L + + L +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPP 224
+ + SK ++ DL A IL ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 225 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284
E + T ES ++S+G L +L S P + D + +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273
Query: 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
E+ + C +P +RP K +V + E+
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 5e-32
Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 17/247 (6%)
Query: 75 VVYKGKL-ENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
VYKG E +A ++ + ++F EEA + L++ + +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 132 ----LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 186
+LV E M + TL +L MK + + + L++ ++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 187 AYRILF-DEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGT 243
I G+ ++ GL R + + F PE + +Y+FG
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+L++ + ++ P S + + + +T F E+ + C++ ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 258 YSIKDLL 264
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 123 bits (309), Expect = 7e-32
Identities = 54/290 (18%), Positives = 98/290 (33%), Gaps = 21/290 (7%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
VV++ A K D +E +++ LR+ L NL + +E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF- 192
+ E+M L + + E + M + + + + L + ++ DL I+F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFT 158
Query: 193 -DEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+L FGL + +S F PE V + ++S G L L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 249 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 308
LSG P + D ++ + + L +P R
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 309 L-----VTALSPLQKETEVPSHVLMGIPHS------ASVSPLSPLGEACS 347
+T + +++++PS I S A PL PLG +
Sbjct: 277 ALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISN 326
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 7e-31
Identities = 50/257 (19%), Positives = 90/257 (35%), Gaps = 20/257 (7%)
Query: 75 VVYKGKLE----NQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCE 127
VV +G+ + +AVK P F+ E ++ L + L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
+ +V E P +L R + +A+ + Y SK ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYS 240
+L ++ FGLM+ + A+ PE L+T + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FG L ++ + P L + L + +D ++ + +C ++P
Sbjct: 200 FGVTLWEMFTYGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256
Query: 301 RERPNPKSLVTALSPLQ 317
+RP +L L Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 8e-31
Identities = 52/263 (19%), Positives = 99/263 (37%), Gaps = 27/263 (10%)
Query: 75 VVYKGKLENQRR----IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGD 129
V++G + +A+K R+ FL+EA ++ Q + + L+G E +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
++ E L + + + A + L+ AL Y SK ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEY-----LRTGRVTPESVIYSFGTL 244
+L + +L FGL + D Y + P ++ + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 245 LLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249
Query: 300 PRERPNPKSLVTALSPLQKETEV 322
P RP L LS + +E +
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKA 272
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (298), Expect = 8e-31
Identities = 43/288 (14%), Positives = 90/288 (31%), Gaps = 50/288 (17%)
Query: 75 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEA--RSVGQLRNNRLTNLLGCCCEGD--- 129
V++GK +AVK F+ + R + EA LR+ + + + +
Sbjct: 18 EVWRGKWRG-EEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73
Query: 130 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH----- 183
+ LV++Y + +L +L + + +++ L A L + +
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 184 --DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----STNLAFTP----PEYLRT---- 229
DL + IL ++G ++ GL + T PE L
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 230 --GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----------------DLIRDRNLQML 271
+ IY+ G + ++ I H ++ + Q L
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250
Query: 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ + + + ++ C R + LS L ++
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 2e-30
Identities = 46/244 (18%), Positives = 76/244 (31%), Gaps = 15/244 (6%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
V + +AVK + D P +E L + + G EG+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
L EY L + M R L + Y G + D+ +L
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLL 136
Query: 193 DEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV-IYSFGTLL 245
DE N ++S FGL R L + PE L+ E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+L+G+ + + + + D L+ + L P R
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARIT 253
Query: 306 PKSL 309
+
Sbjct: 254 IPDI 257
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 117 bits (295), Expect = 6e-30
Identities = 45/241 (18%), Positives = 81/241 (33%), Gaps = 10/241 (4%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
VV++ R K N D E + QL + +L NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
+ E++ L + E + M A + + + L++ ++ D+ I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCE 161
Query: 194 --EDGNPRLSTFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ + ++ FGL + + F PE + V + +++ G L L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 249 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 308
LSG P D + D + E LQ EPR+R
Sbjct: 222 LSGL--SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD 279
Query: 309 L 309
Sbjct: 280 A 280
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 5e-29
Identities = 38/252 (15%), Positives = 92/252 (36%), Gaps = 11/252 (4%)
Query: 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
I + G +V++ +++ K ++ D +E + R+ + +L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
+E +++ E++ + + + + + + V + +AL++ S +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-H 125
Query: 183 HDLNAYRILFDEDGNPR--LSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESV 237
D+ I++ + + FG + + G ++ + PE + V+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 238 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
++S GTL+ LLSG P A + M + + + + E + R L
Sbjct: 186 MWSLGTLVYVLLSGI--NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV 243
Query: 298 YEPRERPNPKSL 309
E + R
Sbjct: 244 KERKSRMTASEA 255
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 114 bits (286), Expect = 5e-29
Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 11/242 (4%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
V + Q+ +A+K + A E + ++++ + L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAYRI 190
L+ + + L + E R++ + A++Y G N
Sbjct: 84 LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 191 LFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
DED +S FGL K G ST + PE L + +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 248 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 307
LL G PP + + + + + + + DD ++ +P +R +
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 308 SL 309
Sbjct: 260 QA 261
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (282), Expect = 1e-28
Identities = 41/253 (16%), Positives = 81/253 (32%), Gaps = 19/253 (7%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V + L R A+K + E + +L + L + ++
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
Y N L K++ + ALEY K ++ DL I
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139
Query: 191 LFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 244
L +ED + +++ FG K S+ + PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
+ L++G + LI + +++ E F + + L + L + +R
Sbjct: 200 IYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKARDLVEKLLVLDATKRL 253
Query: 305 NPKSLVTALSPLQ 317
+ +
Sbjct: 254 GCEEMEGYGPLKA 266
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 112 bits (280), Expect = 1e-28
Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 20/245 (8%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCE--- 127
V+ + L R +AVK DP +F EA++ L + + +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 128 -GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 186
G +V EY+ TL + PM + V+ QAL + G ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG-IIHRDVK 138
Query: 187 AYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL-------AFTPPEYLRTGRVTPESVIY 239
I+ ++ FG+ + D + T + PE R V S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 240 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
S G +L ++L+G+ PP + + D + +L + + L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 300 PRERP 304
P R
Sbjct: 257 PENRY 261
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (277), Expect = 5e-28
Identities = 54/271 (19%), Positives = 95/271 (35%), Gaps = 33/271 (12%)
Query: 75 VVYKG------KLENQRRIAVKRFNR-MAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCC 126
V + K R +AVK + R + E + + + + + NLLG C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 127 E-GDERLLVAEYMPNETLAKHLFHWETH--------------PMKWAMRLRVVLHLAQAL 171
+ G +++ E+ L+ +L + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
E+ S+ ++ DL A IL E ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285
+ T +S ++SFG LL ++ S P + D + D
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVKIDEEFCRRLKEGTRMRAPDYTT 263
Query: 286 TELVRLASRCLQYEPRERPNPKSLVTALSPL 316
E+ + C EP +RP LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 109 bits (273), Expect = 1e-27
Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 25/255 (9%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP---------RQFLEEARSVGQLRNNRLT-NLLG 123
VV + + AVK + L+E + ++ + L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 124 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 183
LV + M L +L E + +++ L + + +
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIV-HR 134
Query: 184 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRV------TP 234
DL IL D+D N +L+ FG G+ ++ PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 235 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294
E ++S G ++ LL+G PP + + M + DD + L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 295 CLQYEPRERPNPKSL 309
L +P++R +
Sbjct: 253 FLVVQPQKRYTAEEA 267
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 108 bits (271), Expect = 5e-27
Identities = 43/237 (18%), Positives = 86/237 (36%), Gaps = 18/237 (7%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ---FLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V+ + N R A+K + +Q +E + + + + + G + +
Sbjct: 19 RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ 78
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
++ +Y+ L ++ + + ALEY SK +Y DL I
Sbjct: 79 IFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENI 135
Query: 191 LFDEDGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
L D++G+ +++ FG K D + + PE + T +SFG L+ ++L
Sbjct: 136 LLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERP 304
+G D N + L + ++ L SR + + +R
Sbjct: 196 AGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRL 244
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 109 bits (272), Expect = 9e-27
Identities = 47/240 (19%), Positives = 80/240 (33%), Gaps = 16/240 (6%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTN---LLGCCCE 127
VY + + + A+K ++ L E + + +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
D+ + + M L HL A + LE+ ++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKP 135
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--LAFTPPEYLRTGR-VTPESVIYSFGTL 244
IL DE G+ R+S GL + K +++ + PE L+ G + +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 304
L LL G H + + LT + + D EL L LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV---ELPDSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 9e-27
Identities = 46/242 (19%), Positives = 84/242 (34%), Gaps = 22/242 (9%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
V+ + + + A+K + +E+ + LT++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
V EY+ L H+ H + + L++ SKG +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDN 133
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYSFGTLL 245
IL D+DG+ +++ FG+ K + G + + T PE L + +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRER 303
++L G+ ++ + L S E L + EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 304 PN 305
Sbjct: 246 LG 247
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 8e-26
Identities = 54/272 (19%), Positives = 95/272 (34%), Gaps = 35/272 (12%)
Query: 75 VVYKGKL--------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNR-LTNLLGC 124
V + ++AVK A D + E + + ++ + NLLG
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 125 CCEGDERLLVAEYMPNETLAKHLFHWETHP--------------MKWAMRLRVVLHLAQA 170
C + ++ EY L ++L + + +A+
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPP 224
+EY SK ++ DL A +L ED +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 225 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 284
E L T +S ++SFG LL ++ + P + + L L +
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
EL + C P +RP K LV L +
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 1e-25
Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 19/249 (7%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ------FLEEARSVGQLRNNRLTNLLGCCCE 127
VV K + + A K + R+ E + ++++ + L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
+ +L+ E + L E + + + + Y S A + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141
Query: 188 YRILFDEDGNPR----LSTFGLMKNSRDGKSYSTNL---AFTPPEYLRTGRVTPESVIYS 240
I+ + P+ + FGL G + F PE + + E+ ++S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G + LLSG + + E ++ + R L +P
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAV--NYEFEDEYFSNTSALAKDFIRRLLVKDP 259
Query: 301 RERPNPKSL 309
++R +
Sbjct: 260 KKRMTIQDS 268
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (256), Expect = 2e-25
Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 27/248 (10%)
Query: 75 VVYKGK-LENQRRIAVKRFNR------MAWPDPRQFLEEARSVGQLRNN--RLTNLLGCC 125
VY G + + +A+K + P+ + E + ++ + + LL
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
D +L+ E E ++ + + +A+ +C + G L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 186 NAYRILFDED-GNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVTPESV-IYSF 241
IL D + G +L FG +D + ++PPE++R R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL D++ G P H ++IR + F +E L CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244
Query: 302 ERPNPKSL 309
+RP + +
Sbjct: 245 DRPTFEEI 252
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 101 bits (251), Expect = 2e-24
Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 32/284 (11%)
Query: 63 NIVSEH-------GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR 114
N+V H GE + V+++G L N +++A+K R + D Q +E R+ L
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58
Query: 115 N-NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY 173
+ N+ EG +LV + + L + ++
Sbjct: 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 174 CTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDGKSYSTN---------- 218
K +Y D+ L + FG++K RD +
Sbjct: 117 IHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175
Query: 219 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DSC 275
+ + + + G + + L G + + ++ S
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 276 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ E + P+ L S + +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 100 bits (249), Expect = 3e-24
Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 24/264 (9%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERL 132
+Y G + +A+K Q E++ ++ + + C EGD +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
+V E + LF++ + L + + +EY SK ++ D+ L
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLM 136
Query: 193 DEDGNPRL---STFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVI 238
L FGL K RD +++ + + +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 239 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVRLASRCL 296
S G +L+ G R + ++ S +E + C
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256
Query: 297 QYEPRERPNPKSLVTAL-SPLQKE 319
++P+ L + ++
Sbjct: 257 SLRFDDKPDYSYLRQLFRNLFHRQ 280
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 5e-24
Identities = 39/271 (14%), Positives = 94/271 (34%), Gaps = 37/271 (13%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132
+V N+ R+A+K+ + ++ L E + + + R+ + +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 133 LVAEYMPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
+ Y+ + L+ +T + + + + L+Y S L+ DL +L
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLL 141
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVTPESV-IYSFGT 243
+ + ++ FGL + + ++ + PE + + +S+ I+S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE-------------------------G 278
+L ++LS + I P + L +L E
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ + ++ + L + L + P +R +
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.8 bits (245), Expect = 1e-23
Identities = 46/268 (17%), Positives = 82/268 (30%), Gaps = 36/268 (13%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEG 128
VYK + + +A+K+ + R L E + + +L + + LL
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
LV ++M + + + + + +L Q LEY + DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGT 243
+L DE+G +L+ FGL K+ T+ T P +++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE----------------------GQFT 281
+L +LL P + R + L E
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 282 DDDGTELVRLASRCLQYEPRERPNPKSL 309
G +L+ L + P R
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 98.0 bits (243), Expect = 2e-23
Identities = 44/276 (15%), Positives = 95/276 (34%), Gaps = 33/276 (11%)
Query: 64 IVSEHGEKAPNVVYKGKLENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNL 121
+ + GE VVYK + A+K+ + P + E + +L+++ + L
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 181
+LV E++ + L ++ +L L + YC + L
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-VL 122
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PEYLRTGRVTPES 236
+ DL +L + +G +++ FGL + T+ T + + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG------------------ 278
I+S G + ++++G + P + R ++L +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 279 -----QFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
F + L S+ L+ +P +R K
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (237), Expect = 2e-22
Identities = 48/242 (19%), Positives = 87/242 (35%), Gaps = 17/242 (7%)
Query: 75 VVYKGK-LENQRRIAVKRFNR---MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V + R A+K + +A + + E+R + R+ LT L D
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
V EY L HL + A + ALEY S+ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRDV-VYRDIKLENL 136
Query: 191 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 246
+ D+DG+ +++ FGL K + TP PE L + G ++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 247 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 306
+++ G+ + + + + L E +F E L + L+ +P++R
Sbjct: 197 EMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250
Query: 307 KS 308
Sbjct: 251 GP 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.5 bits (237), Expect = 3e-22
Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 20/249 (8%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCC----CEG 128
V + Q + A+K D + E + + ++
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
L+V E + L + ++ + +A++Y S A + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDVKPE 140
Query: 189 RILFD---EDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFG 242
+L+ + +L+ FG K + S +T + PE L + ++S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 243 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEP 300
++ LL G S+ I + E + E+ L L+ EP
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260
Query: 301 RERPNPKSL 309
+R
Sbjct: 261 TQRMTITEF 269
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (237), Expect = 3e-22
Identities = 53/272 (19%), Positives = 89/272 (32%), Gaps = 43/272 (15%)
Query: 75 VVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER-- 131
VVY+ KL ++ +A+K+ + D R E + + +L + + L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 132 ----LLVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL 185
LV +Y+P + + + L ++L Y S G + H D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDI 148
Query: 186 NAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYS 240
+L D D +L FG K G+ + + P T ++S
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 241 FGTLLLDLLSGKHI----PPSHALDLI-------------------RDRNLQMLTDSCLE 277
G +L +LL G+ I L I + +
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
F E + L SR L+Y P R P
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.2 bits (233), Expect = 5e-22
Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 33/266 (12%)
Query: 75 VVYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
VVYK + +A+K R + P + E + +L + + LL ++
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
LV E++ ++ L K + + + + L Q L +C S R L+ DL +L
Sbjct: 77 YLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLL 134
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLL 246
+ +G +L+ FGL + T+ T P L + I+S G +
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 247 DLLSGKHI-PPSHALDLIRD--RNLQMLTDSCLEGQFTDDD------------------- 284
++++ + + P +D + R L + G + D
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 285 -GTELVRLASRCLQYEPRERPNPKSL 309
+ L S+ L Y+P +R + K+
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.4 bits (231), Expect = 9e-22
Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 36/281 (12%)
Query: 64 IVSEHGEKAPNVVYKGK--LENQRRIAVKRFNRMAWPD--PRQFLEEA---RSVGQLRNN 116
V+E GE A V+K + R +A+KR + P + E R + +
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLA----KHLFHWETHPMKWAMRLRVVLHLAQALE 172
+ L C + E + +L + ++ L + L+
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 173 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRT 229
+ S ++ DL IL G +L+ FGL + + ++ L + PE L
Sbjct: 131 FLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 230 GRVTPESVIYSFGTLLLDLLSGKHI---------------------PPSHALDLIRDRNL 268
++S G + ++ K + D+ R
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ +F D L +CL + P +R + S
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.3 bits (231), Expect = 2e-21
Identities = 36/267 (13%), Positives = 82/267 (30%), Gaps = 33/267 (12%)
Query: 75 VVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
V ++A+K+ R + ++ E R + +R+ + LL +
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 132 LLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
++ + + +V + + L Y + G + DL
Sbjct: 93 DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGN 151
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLD 247
+ +ED ++ FGL + + + + P L R T I+S G ++ +
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211
Query: 248 LLSGKHI-------------------PPSHALDLIRDRNLQMLTDSCLE------GQFTD 282
+++GK + PP+ + ++ + E
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271
Query: 283 DDGTELVRLASRCLQYEPRERPNPKSL 309
+ V L + L + +R
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.5 bits (218), Expect = 4e-20
Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 35/267 (13%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131
V+K K E +A+KR + P L E + +L++ + L +
Sbjct: 17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
LV E+ + F + + + L + L +C S+ L+ DL +L
Sbjct: 77 TLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLL 133
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLL 246
+ +G +L+ FGL + + T P + ++S G +
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 247 DLLSGKHIP------------------------PSHALDLIRDRNLQMLTDSCLEGQFTD 282
+L + L + M +
Sbjct: 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 283 DDGTELVRLASRCLQYEPRERPNPKSL 309
L L+ P +R + +
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.0 bits (217), Expect = 9e-20
Identities = 47/292 (16%), Positives = 94/292 (32%), Gaps = 49/292 (16%)
Query: 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTN 120
+++ G+ V+K + + +++A+K+ P L E + + L++ + N
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 121 LLGCCCEGDER--------LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE 172
L+ C LV ++ ++ + RV+ L L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLY 131
Query: 173 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPP 224
Y L+ D+ A +L DG +L+ FGL + K+ N L + PP
Sbjct: 132 YIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 225 EYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283
E L R P ++ G ++ ++ + I + Q+ E D
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 284 DGT--------------------------ELVRLASRCLQYEPRERPNPKSL 309
+ + L + L +P +R +
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.9 bits (217), Expect = 1e-19
Identities = 43/236 (18%), Positives = 78/236 (33%), Gaps = 14/236 (5%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ---FLEEARSVGQLRNNRLTNLLGCCCEGDE 130
V K E+ A+K ++ +Q L E R + + L L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 131 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
+V EY+ + HL + EY S +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENL 172
Query: 191 LFDEDGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
L D+ G +++ FG K + + PE + + ++ G L+ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+G PP A I+ + +F ++L L LQ + +R
Sbjct: 233 AGY--PPFFADQPIQ----IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.7 bits (198), Expect = 2e-17
Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 21/246 (8%)
Query: 75 VVYKGKL----ENQRRIAVKRFNRMAWPD----PRQFLEEARSVGQLRNNRLTNLLGCCC 126
V+ + + + A+K + E + + +R + L
Sbjct: 39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98
Query: 127 EGDERLLVA-EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +L + +Y+ L HL E V + ALE+ G +Y D+
Sbjct: 99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQI--YVGEIVLALEHLHKLG-IIYRDI 155
Query: 186 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT-------GRVTPESVI 238
IL D +G+ L+ FGL K ++ EY+
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 215
Query: 239 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298
+S G L+ +LL+G P + E + + L R L
Sbjct: 216 WSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 299 EPRERP 304
+P++R
Sbjct: 274 DPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.0 bits (191), Expect = 2e-16
Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 33/278 (11%)
Query: 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTN 120
+S G A V + R+AVK+ +R + ++ E R + +++ +
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKG 178
LL + L + + + ++ + + L+Y S
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 179 RALYHDLNAYRILFDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 236
+ DL + +ED ++ FGL + +T P L
Sbjct: 142 II-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 237 VIYSFGTLLLDLLSGKH-------------------IPPSHALDLIRDRNLQMLTDSCLE 277
I+S G ++ +LL+G+ P + L I + + S +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 278 ------GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
V L + L + +R
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 75.3 bits (184), Expect = 2e-15
Identities = 39/276 (14%), Positives = 88/276 (31%), Gaps = 50/276 (18%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERL 132
V++ + N ++ VK + ++ E + + LR + L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 133 --LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190
LV E++ N + + + + +AL+YC S G + D+ + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNV 160
Query: 191 LFDEDGNP-RLSTFGLMKNSRDGKSYS----TNLAFTPPEYLRTGRVTPESVIYSFGTLL 245
+ D + RL +GL + G+ Y+ + P + ++S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 246 LDLLSGKH--------------------------------IPPSHALDLIRDRNLQMLTD 273
++ K I + I R+ + +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ + E + + L+Y+ + R +
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.0 bits (175), Expect = 2e-14
Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 65/299 (21%)
Query: 75 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
V+ K + N +A+K R +E + + ++ + T +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 134 VAEYMPNETLAKHLFHWETHPMKW--------------AMRLRVVLHLAQALEYCTSKGR 179
+ +E ++ L L+Y +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 180 ALYHDLNAYRILFDEDGNP------RLSTFGLMKNSRDGKSYS-TNLAFTPPEYLRTGRV 232
++ D+ +L + +P +++ G + + S + PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 233 TPESVIYSFGTLLLDLLSGKHI-------------------------PPSHALDLIRDRN 267
+ I+S L+ +L++G + PS+ L +
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 268 LQMLTDSCLEG-----------------QFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ L +F+ D+ E+ S LQ +PR+R + L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.8 bits (167), Expect = 2e-13
Identities = 39/294 (13%), Positives = 88/294 (29%), Gaps = 54/294 (18%)
Query: 64 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTN 120
+ G A +V R +A+K+ +R ++ E + + + + +
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 121 LLGCCC------EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC 174
LL E + LV E M + ++ + +++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135
Query: 175 TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGR 231
S G ++ DL I+ D ++ FGL + + + + PE +
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE-------------- 277
I+S G ++ +++ K + P ++ ++ L C E
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 278 ----------------------GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 309
+ ++ L S+ L +P +R +
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 47.3 bits (111), Expect = 8e-07
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 484
+ A + M +EA L+ +L
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 47.1 bits (111), Expect = 9e-07
Identities = 17/147 (11%), Positives = 37/147 (25%), Gaps = 25/147 (17%)
Query: 75 VVYKGKLENQRRIAVKRFN----------RMAWPDPRQFLEEARSVGQLRNNRLTNLLGC 124
V+ E VK F A + L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 125 CC----EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 180
+ ++ E + E + ++ V+ + + + +
Sbjct: 75 AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMK 207
++ DL+ Y +L + + F
Sbjct: 125 VHGDLSQYNVLVS-EEGIWIIDFPQSV 150
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 3e-04
Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)
Query: 374 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVS------------- 419
S++M +++ E K++G V F++ K A+ Y + + S
Sbjct: 1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
Query: 420 -PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 478
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 61 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 120
Query: 479 EGTTLE 484
+ L
Sbjct: 121 KVLQLY 126
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Length = 153 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Score = 39.2 bits (90), Expect = 3e-04
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 374 SFQMWTDQ-MQETLNSKKKGDVAFRQKDLKDAIECYTQF---------------IDAGTM 417
+ ++ +Q + K++G+ F++ ++ +AI Y + +D
Sbjct: 5 IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKN 64
Query: 418 VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVAL 477
+ + + CY + A++ A + I A Y A G EA+ L
Sbjct: 65 IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 124
Query: 478 KEGTTLE 484
+ +L
Sbjct: 125 YKAASLN 131
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 7e-04
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 441
+ E ++ +G +A +KD K A++ ++ D + Y + +A
Sbjct: 2 LVEAISLWNEGVLAADKKDWKGALDAFSAVQDP----HSRICFNIGCMYTILKNMTEAEK 57
Query: 442 DAMQAQIISPIWHIASYLQAAALSAMGMENEA 473
++ +A + + + A
Sbjct: 58 AFTRSINRDKHLAVAYFQRGMLYYQTEKYDLA 89
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 8e-04
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Query: 370 ANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC 429
A + + + V + Q + AI+ Y + I+ P Y +
Sbjct: 222 AVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANA 280
Query: 430 YLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+A + A + P + A G EA ++
Sbjct: 281 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRK 330
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 8e-04
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALND 442
++ L K+ G+ A+++KD A++ Y + + + T ++ Y
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 443 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 479
+A + A A + +G + K+
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 168 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Score = 37.6 bits (86), Expect = 0.001
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 15/126 (11%)
Query: 374 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFI--------------DAGTMV 418
S++M T + E K+KG V F+ A+ Y + + A
Sbjct: 3 SWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESF 62
Query: 419 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 478
+ ++CYL A+ +A + Y + A M A+ +
Sbjct: 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 122
Query: 479 EGTTLE 484
+ +
Sbjct: 123 KVLEVN 128
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.4 bits (80), Expect = 0.003
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 448
K+KG+ A ++ DA++CY++ I RS Y Q A D +
Sbjct: 7 KEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYS-NRSAAYAKKGDYQKAYEDGCKTVD 65
Query: 449 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 484
+ P W +AAAL + EA+ +EG E
Sbjct: 66 LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.9 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.79 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.79 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.76 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.75 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.73 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.7 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.66 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.66 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.64 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.6 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.59 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.59 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.54 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.53 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.52 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.51 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.44 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.42 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.4 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.36 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.3 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.29 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.25 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.24 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.24 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.23 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.2 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.18 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.08 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.08 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.07 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.06 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.05 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.98 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.97 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.91 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.89 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.78 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.78 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.74 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.66 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.65 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.61 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.48 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.4 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.32 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.29 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.27 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.21 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.1 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.09 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.04 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.96 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.93 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.74 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.62 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.59 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.26 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.04 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.95 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 88.62 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 87.98 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 84.13 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 83.48 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-55 Score=414.56 Aligned_cols=255 Identities=20% Similarity=0.281 Sum_probs=204.6
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++.+.+.+.||+|+||+||+|++.+ .||||+++.... ...+.|.+|+.++.+++|||||++++++.. +..++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 3456777888999999999998643 599999975432 235789999999999999999999998865 56899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|++||+|.+++.. ...++++..+..|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 84 y~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999964 3456999999999999999999999999 999999999999999999999999999765422
Q ss_pred --CccccCCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-HhhhccccccccccccCCCCchhHH
Q 011092 213 --KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....||+.|||||++.+ ..++.++|||||||++|||+||+.||...... .+..........+. ....+..+++
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 240 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPK 240 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchH
Confidence 24578999999999864 34789999999999999999999998653221 11111111111111 1123445668
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
++.+|+.+||+.||.+|||+.+|++.|+.+.+.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999988653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.1e-55 Score=417.12 Aligned_cols=254 Identities=20% Similarity=0.320 Sum_probs=214.9
Q ss_pred CccccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.+++++.+.||+|+||+||+|.+. +|+.||||+++... ...++|.+|+.++++++|||||+++++|.+++..++||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 94 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence 346777888999999999999965 58899999997654 3577899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC----
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 213 (494)
+++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 99999999997655678999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc-hhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 214 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
...|++.|+|||++.+..++.++|||||||++|||++|..|+... ....+... .........+..+++++.+|
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-----HHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHH-----HhcCCCCCCCccchHHHHHH
Confidence 224678999999999999999999999999999999987665432 22222111 11112223455677899999
Q ss_pred HHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 292 ASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.+||+.||.+|||+.+|++.|+.+...
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887554
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-55 Score=411.28 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=204.2
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++++++.||+|+||+||+|.+.++..||||+++... ...++|.+|++++++++|||||+++|+|..++..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 4677888999999999999998888899999997644 346789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 214 (494)
+|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 84 ~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 84 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 9999998864 3467899999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCC-CCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..||+.|+|||++.+..++.++|||||||++|||+|+..|+ .......+...... ......|...++++.+|+.
T Consensus 162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~ 236 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-----GFRLYKPRLASTHVYQIMN 236 (263)
T ss_dssp ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHHH
T ss_pred eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh-----cCCCCCccccCHHHHHHHH
Confidence 46789999999999999999999999999999999965454 33322222211111 1112234456688999999
Q ss_pred HHccCCCCCCCChHHHHHHhccccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
+||+.||.+|||+++|++.|+.+.+
T Consensus 237 ~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 237 HCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999999987753
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-54 Score=412.02 Aligned_cols=244 Identities=20% Similarity=0.265 Sum_probs=209.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.|++++.||+|+||+||+|.. .+|+.||||+++.......+.+.+|+.++++++|||||++++++..++..|+|||||+
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 578889999999999999994 5699999999987665567889999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----Ccc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 215 (494)
||+|.+++.+ +.+++..+..|+.||+.||.|||++| |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998853 46999999999999999999999999 999999999999999999999999999865432 345
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
.||+.|+|||++.+..++.++|||||||++|+|+||..||.............. ........+..++.++.+||.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh---CCCCCCCCcccCCHHHHHHHHHH
Confidence 689999999999999999999999999999999999999876433221111111 11111223456678999999999
Q ss_pred ccCCCCCCCChHHHHH
Q 011092 296 LQYEPRERPNPKSLVT 311 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~ 311 (494)
|+.||.+|||+.++++
T Consensus 254 L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQ 269 (293)
T ss_dssp TCSSTTTSCCHHHHTT
T ss_pred ccCChhHCcCHHHHhc
Confidence 9999999999999986
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-55 Score=419.81 Aligned_cols=265 Identities=22% Similarity=0.295 Sum_probs=208.0
Q ss_pred cCHHHHHHHhcCCc------cccccccCCCCCCCeEEEEEEcC-CC---EEEEEEecCCCCC-ChHHHHHHHHHHhccCC
Q 011092 47 FTLEQLKNATSGFA------VENIVSEHGEKAPNVVYKGKLEN-QR---RIAVKRFNRMAWP-DPRQFLEEARSVGQLRN 115 (494)
Q Consensus 47 ~~~~~~~~~~~~~~------~~~~i~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h 115 (494)
++++++..++++|+ .+++.+.||+|+||+||+|.+.. ++ .||||.+...... ..+.|.+|+++|++++|
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 86 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence 44556666665553 45667788999999999999643 32 5899998754332 25679999999999999
Q ss_pred CCCccEEEEEecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 116 pnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
||||+++|+|..++..++|||||+||+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+||||+.+
T Consensus 87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~~ 164 (299)
T d1jpaa_ 87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSN 164 (299)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred CCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECCC
Confidence 9999999999999999999999999999998864 3457999999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCCC---------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhh
Q 011092 196 GNPRLSTFGLMKNSRDGK---------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRD 265 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~ 265 (494)
+++||+|||+++...... ...+|+.|||||.+.++.++.++|||||||++|||+| |+.||.......+..
T Consensus 165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~ 244 (299)
T d1jpaa_ 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 244 (299)
T ss_dssp CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999999999998654321 1346889999999999999999999999999999998 788886654333222
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 266 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
..... .....+..++..+.+|+.+||+.||.+|||+.+|++.|+.+.+
T Consensus 245 ~i~~~-----~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 245 AIEQD-----YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp HHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcC-----CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11111 1112344567899999999999999999999999999988754
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-55 Score=408.02 Aligned_cols=243 Identities=21% Similarity=0.293 Sum_probs=209.9
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+++++++.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 4678888999999999999996 46899999998642 2234678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--C
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 213 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 213 (494)
|||+||+|.+++.. ..++++..+..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 86 Ey~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 162 (263)
T d2j4za1 86 EYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162 (263)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred eecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence 99999999999974 356999999999999999999999999 999999999999999999999999999876543 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|||||++.+..++.++|||||||++|||+||+.||............... ...+|...++++.+|+.
T Consensus 163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 236 (263)
T d2j4za1 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------EFTFPDFVTEGARDLIS 236 (263)
T ss_dssp ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHH
Confidence 457899999999999999999999999999999999999999765444333221111 11244556789999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||+.||.+|||+.++++
T Consensus 237 ~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHccCCHhHCcCHHHHHc
Confidence 999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-55 Score=413.67 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=210.7
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
++.+++++.||+|+||.||+|.+++++.||||+++... ...+.|.+|+.++++++|||||+++|++.+ +..++||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 34677888899999999999999888899999997644 356789999999999999999999998865 5679999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 213 (494)
++|+|.+++......++++..++.|+.||+.||.|||+++ |+||||||+||||++++.+||+|||+++..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 9999999887544557999999999999999999999999 999999999999999999999999999876543 2
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCC-chhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...||+.|||||++.++.++.++|||||||++|||+||..|+.. .....+...... ......|..+++++.+|+
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li 243 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-----GYRMVRPDNCPEELYQLM 243 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----cCCCCCcccChHHHHHHH
Confidence 34678999999999988899999999999999999997666543 222211111111 112223456678999999
Q ss_pred HHHccCCCCCCCChHHHHHHhccccc
Q 011092 293 SRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+||+.||.+|||+.+|++.|+.+..
T Consensus 244 ~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 244 RLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 99999999999999999999987653
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-54 Score=408.05 Aligned_cols=245 Identities=19% Similarity=0.174 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
+|++++.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|+.++++++|||||++++++.+++..|+||||+
T Consensus 6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 85 (271)
T d1nvra_ 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 85 (271)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEecc
Confidence 578889999999999999996 4699999999976432 23567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC------C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 212 (494)
+||+|.+++. ....+++..+..|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++.... .
T Consensus 86 ~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~ 162 (271)
T d1nvra_ 86 SGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162 (271)
T ss_dssp TTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCccccc
Confidence 9999999996 4567999999999999999999999999 99999999999999999999999999986432 2
Q ss_pred CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|||||++.+..+ +.++|||||||++|||+||+.||............. ............++.++.+|
T Consensus 163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l 239 (271)
T d1nvra_ 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW---KEKKTYLNPWKKIDSAPLAL 239 (271)
T ss_dssp CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH---HTTCTTSTTGGGSCHHHHHH
T ss_pred cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH---hcCCCCCCccccCCHHHHHH
Confidence 34578999999999988776 578999999999999999999986532211110000 00011111223456889999
Q ss_pred HHHHccCCCCCCCChHHHHH
Q 011092 292 ASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~ 311 (494)
+.+||+.||.+|||++++++
T Consensus 240 i~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 240 LHKILVENPSARITIPDIKK 259 (271)
T ss_dssp HHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHcCCChhHCcCHHHHhc
Confidence 99999999999999999976
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=411.87 Aligned_cols=246 Identities=16% Similarity=0.196 Sum_probs=207.5
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.|++++.||+|+||+||+|.. .+|..||||+++.......+.|.+|+++|++++|||||++++++.+++..++||||++
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 468889999999999999995 4689999999987665567889999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC----CCcc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 215 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~ 215 (494)
||+|.+++.. ..+++++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 9999998764 2457999999999999999999999999 99999999999999999999999999875432 2356
Q ss_pred ccCCCcCCCcCCC-----CCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 216 STNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 216 ~~t~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
.||+.|+|||++. +..++.++|||||||++|||+||+.||................ ......+..+++++.+
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~~~~~ 247 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE---PPTLAQPSRWSSNFKD 247 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC---CCCCSSGGGSCHHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---CCCCCccccCCHHHHH
Confidence 7899999999874 4558899999999999999999999987643322221111110 1111234566789999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
||.+||+.||.+|||+.++++
T Consensus 248 li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 248 FLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999976
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-53 Score=397.11 Aligned_cols=248 Identities=25% Similarity=0.349 Sum_probs=211.9
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
+++++++.||+|+||+||+|++++++.||||+++.... ..+.|.+|+.++++++|||||+++|+|.+++..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 45678888999999999999998888999999987543 46789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----Cc
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 214 (494)
+|+|.+++.. ....+++..+++|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 83 ~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 83 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp TEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred CCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 9999998764 3457899999999999999999999999 999999999999999999999999999754432 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.......+....... .....|...++++.+|+.
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li~ 235 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIMY 235 (258)
T ss_dssp SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC-----CCCCCcccccHHHHHHHH
Confidence 457889999999998999999999999999999998 78787665444333222111 112334556689999999
Q ss_pred HHccCCCCCCCChHHHHHHhcc
Q 011092 294 RCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
+||+.||++|||+.++++.|..
T Consensus 236 ~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 236 SCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHC
T ss_pred HHccCCHhHCcCHHHHHHHhhC
Confidence 9999999999999999998864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-54 Score=404.78 Aligned_cols=248 Identities=17% Similarity=0.229 Sum_probs=198.5
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEec--CCccce
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLL 133 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~l 133 (494)
.+++++++.||+|+||+||+|+. .+|+.||||++....... .+.|.+|++++++++|||||++++++.+ ++.+|+
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 35688889999999999999995 568999999997654332 4568999999999999999999999865 456899
Q ss_pred eeecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhcC----CcccccccccceeecCCCCeEEcccCCcc
Q 011092 134 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG----RALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~----~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
|||||+||+|.+++... ....+++..++.|+.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 99999999999998642 3467999999999999999999999864 39999999999999999999999999998
Q ss_pred cCCCC----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCch
Q 011092 208 NSRDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 208 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
..... ....||+.|||||++.+..++.++|||||||++|||+||+.||.......+....... . ....+..
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~----~-~~~~~~~ 237 (269)
T d2java1 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG----K-FRRIPYR 237 (269)
T ss_dssp HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT----C-CCCCCTT
T ss_pred ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC----C-CCCCCcc
Confidence 75433 3467899999999999889999999999999999999999998765444332221111 1 1123456
Q ss_pred hHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 284 DGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+++++.+|+.+||+.||.+|||+.++++
T Consensus 238 ~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 238 YSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 6789999999999999999999999986
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.8e-54 Score=409.43 Aligned_cols=243 Identities=20% Similarity=0.223 Sum_probs=206.1
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+++++.||+|+||+||+|+. .+|+.||||++....... .+.|.+|+.++++++|||||++++++.+++..|+||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 67788889999999999995 568999999997654333 35688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCCcccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 217 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 217 (494)
|+||+|..++. ..+++++..+..|+.||+.||.|||++| |+||||||+|||++.++.+||+|||+++.........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 99999977665 3467999999999999999999999999 99999999999999999999999999998877778899
Q ss_pred CCCcCCCcCCCC---CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 218 NLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 218 t~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
|+.|||||++.+ +.++.++|||||||++|||++|..||............... ......+...++++.+||.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 45899999999999999999999998654332221111111 11111233456889999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.||.+|||+.++++
T Consensus 250 ~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp HTCSSGGGSCCHHHHTT
T ss_pred HCcCChhHCcCHHHHHh
Confidence 99999999999999986
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3e-53 Score=405.64 Aligned_cols=245 Identities=17% Similarity=0.201 Sum_probs=193.6
Q ss_pred ccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 62 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
|++++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.+|++++|||||++++++.+++..|+|||||+
T Consensus 11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~ 90 (307)
T d1a06a_ 11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 90 (307)
T ss_dssp EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 77888899999999999995 46899999999764432 24568899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec---CCCCeEEcccCCcccCCCC---C
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG---K 213 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~---~ 213 (494)
||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||+. +++.+||+|||+++..... .
T Consensus 91 gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 167 (307)
T d1a06a_ 91 GGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167 (307)
T ss_dssp SCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred CCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence 999999997 3567999999999999999999999999 99999999999994 5789999999999865433 3
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|||||++.+..++.++|||||||++|||+||+.||................. ......+..+++++.+|+.
T Consensus 168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~ 245 (307)
T d1a06a_ 168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDFIR 245 (307)
T ss_dssp -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHHH
T ss_pred eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHHHH
Confidence 45799999999999999999999999999999999999999977644433322222111 1112233456789999999
Q ss_pred HHccCCCCCCCChHHHHH
Q 011092 294 RCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~ 311 (494)
+||+.||.+|||+.++++
T Consensus 246 ~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 246 HLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp HHSCSSGGGSCCHHHHHH
T ss_pred HHccCCHhHCcCHHHHhc
Confidence 999999999999999988
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-53 Score=411.84 Aligned_cols=248 Identities=19% Similarity=0.225 Sum_probs=202.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
++++++.||+|+||+||+|.. .+|+.||||+++...... ...+.+|+.+|++++|||||+++++|.+.+..++||||+
T Consensus 7 ~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~ 86 (322)
T d1s9ja_ 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86 (322)
T ss_dssp GEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 577888899999999999995 568999999997654333 567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccceeecCCCCeEEcccCCcccCC--CCCcc
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKSY 215 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~~ 215 (494)
+||+|.+++.+ .+.+++..+..++.||+.||.|||++ + |+||||||+|||++.+|++||+|||+|+... ...+.
T Consensus 87 ~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 87 DGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp TTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred CCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence 99999999974 35699999999999999999999985 8 9999999999999999999999999998543 23467
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccc--------------------------
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------------- 269 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~-------------------------- 269 (494)
.||+.|+|||++.+..++.++|||||||++|||+||+.||..............
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence 899999999999999999999999999999999999999865422111000000
Q ss_pred ------------ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.......+.......+.++.+|+.+||+.||.+|||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 000000000111124578999999999999999999999987
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-53 Score=401.45 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=208.7
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
++++++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++|||||+++|++.+ +..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence 35678888999999999999998888889999997654 356789999999999999999999999854 5689999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-----C
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 213 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 213 (494)
++|+|..++.......+++..++.|+.||+.||.|||+++ |+||||||+||||+.++++||+|||+++..... .
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence 9999999987655567999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc-hhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...+|+.|+|||++..+.++.++|||||||++|||+||+.|+... ....+....... .....+..+++++.+||
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 247 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLM 247 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-----CCCCCCcccCHHHHHHH
Confidence 345789999999999999999999999999999999977665443 222121111111 11224456678999999
Q ss_pred HHHccCCCCCCCChHHHHHHhcccccc
Q 011092 293 SRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+||+.||++|||+.+|++.|+.+...
T Consensus 248 ~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 248 CQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 999999999999999999999987654
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-53 Score=403.74 Aligned_cols=243 Identities=18% Similarity=0.197 Sum_probs=207.5
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
++|++++.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5688889999999999999996 56999999999642 2234678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC---
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 212 (494)
||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 88 Ey~~gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 99999999998874 457999999999999999999999999 999999999999999999999999999865422
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 289 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (494)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......+....... ...+|..+++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHH
Confidence 2456999999999999999999999999999999999999999765443333222211 1124456678999
Q ss_pred HHHHHHccCCCCCCCChHHHHH
Q 011092 290 RLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 290 ~li~~cl~~dp~~Rps~~~vl~ 311 (494)
+||.+||+.||.+|||+++++.
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTC
T ss_pred HHHHHHccCCHhHCcCHHHHcC
Confidence 9999999999999999999753
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-53 Score=400.24 Aligned_cols=243 Identities=21% Similarity=0.268 Sum_probs=202.1
Q ss_pred cCCCCCCCeEEEEEEc---CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCCC
Q 011092 67 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~gs 142 (494)
+||+|+||+||+|.+. ++..||||+++..... ..+.|.+|+++|++++|||||+++|++.. +..|+||||++||+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 3799999999999853 3557999999765422 25679999999999999999999999865 56899999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-------Ccc
Q 011092 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSY 215 (494)
Q Consensus 143 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------~~~ 215 (494)
|.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 95 L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~ 172 (285)
T d1u59a_ 95 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 172 (285)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred HHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhccccccccccccccc
Confidence 9998753 3457999999999999999999999999 999999999999999999999999999865432 234
Q ss_pred ccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 216 ~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
.||+.|+|||++.++.++.++|||||||++|||+| |+.||.......+...... ......|..++.++.+|+.+
T Consensus 173 ~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~ 247 (285)
T d1u59a_ 173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELYALMSD 247 (285)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred ccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHH
Confidence 57899999999998899999999999999999998 8888865433322221111 11223455677899999999
Q ss_pred HccCCCCCCCChHHHHHHhcccc
Q 011092 295 CLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
||+.||.+|||+.+|++.|+...
T Consensus 248 cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 248 CWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp TTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999987654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-53 Score=399.63 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEEEcC-C----CEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKLEN-Q----RRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++++.+.||+|+||+||+|.+.+ + ..||||+++...... ...|.+|+.++++++|||||+++|++...+..++|
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v 87 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 87 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence 34455566999999999999643 2 379999997644322 45799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+.+++|.+.+.. ....+++..+..|+.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 165 (283)
T d1mqba_ 88 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165 (283)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence 999999999988764 3467999999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCc-hhHHhhhccccccccccccCCCCchhHH
Q 011092 213 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 213 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
....||+.|||||++.+..++.++|||||||++|||+||..|+... ....+..... .......+..++.
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~-----~~~~~~~~~~~~~ 240 (283)
T d1mqba_ 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-----DGFRLPTPMDCPS 240 (283)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-----TTCCCCCCTTCBH
T ss_pred cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHh-----ccCCCCCchhhHH
Confidence 1235788999999999999999999999999999999977665432 2221211111 1112233455678
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.+.+|+.+||+.||.+|||+.+|++.|+.+.+.
T Consensus 241 ~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 241 AIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 899999999999999999999999999887653
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-53 Score=398.00 Aligned_cols=242 Identities=21% Similarity=0.268 Sum_probs=198.9
Q ss_pred cCCCCCCCeEEEEEEcC---CCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCCCC
Q 011092 67 EHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 67 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~g 141 (494)
.||+|+||+||+|.+.+ ++.||||+++...... .+.|.+|+.++++++|||||+++|+|.. +..+|||||+++|
T Consensus 14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g 92 (277)
T d1xbba_ 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG 92 (277)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCC
Confidence 57999999999998543 4689999997543322 4679999999999999999999999965 4678999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-------Cc
Q 011092 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KS 214 (494)
Q Consensus 142 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------~~ 214 (494)
+|.+++. ...++++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 93 ~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 169 (277)
T d1xbba_ 93 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169 (277)
T ss_dssp EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred cHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence 9999987 3467999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
..||+.|||||++.+..++.++|||||||++|||+| |+.||.+.....+...... ......|..++.++.+|+.
T Consensus 170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~~~~li~ 244 (277)
T d1xbba_ 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPREMYDLMN 244 (277)
T ss_dssp -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHH
T ss_pred cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCHHHHHHHH
Confidence 457899999999998899999999999999999998 8888876433322221111 1122345566789999999
Q ss_pred HHccCCCCCCCChHHHHHHhcccc
Q 011092 294 RCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 294 ~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
+||+.||.+|||+.+|++.|+.+.
T Consensus 245 ~cl~~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 245 LCWTYDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHhhCHH
Confidence 999999999999999999887653
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=7.8e-53 Score=409.96 Aligned_cols=249 Identities=18% Similarity=0.167 Sum_probs=211.3
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
|+.|++++.||+|+||+||+|.. .+|+.||||+++.....+.+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 45688999999999999999995 56999999999765544456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec--CCCCeEEcccCCcccCCCCC--
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~-- 213 (494)
|+||+|.+++.. ...++++..+..|+.||+.||.|||++| |+||||||+||||+ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999988754 3457999999999999999999999999 99999999999998 67899999999998765443
Q ss_pred -ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.............. .......+..++.++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD--WEFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC--CCCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCcccccCCCHHHHHHH
Confidence 3578999999999999999999999999999999999999997654433222211111 1122233445678999999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||+.||.+|||+.++++
T Consensus 264 ~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-52 Score=392.32 Aligned_cols=242 Identities=19% Similarity=0.255 Sum_probs=197.0
Q ss_pred cccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEec----CCccceee
Q 011092 63 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLVA 135 (494)
Q Consensus 63 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lv~ 135 (494)
++..+||+|+||+||+|... ++..||+|++...... ..+.|.+|+++|++++|||||++++++.. ....|+||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 45557899999999999954 5889999999754322 24678999999999999999999999865 34579999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-Ccccccccccceeec-CCCCeEEcccCCcccCCCC-
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~- 212 (494)
||++||+|.+++.. ...+++..+..|+.||+.||+|||+++ +|+||||||+|||++ +++.+||+|||+++.....
T Consensus 92 E~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~ 169 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 169 (270)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc
Confidence 99999999999974 357999999999999999999999975 399999999999996 5899999999999865443
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCch-hHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....||+.|||||++.+ .++.++|||||||++|||+||+.||.... ...+........... ..+...++++.+
T Consensus 170 ~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~ 244 (270)
T d1t4ha_ 170 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA----SFDKVAIPEVKE 244 (270)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG----GGGGCCCHHHHH
T ss_pred cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCc----ccCccCCHHHHH
Confidence 35679999999999875 69999999999999999999999986532 122221111111111 122334578999
Q ss_pred HHHHHccCCCCCCCChHHHHH
Q 011092 291 LASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~~vl~ 311 (494)
|+.+||+.||++|||+.++++
T Consensus 245 li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 245 IIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHccCCHhHCcCHHHHhC
Confidence 999999999999999999986
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-53 Score=406.87 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=203.5
Q ss_pred ccccccccCCCCCCCeEEEEEEcC-C-----CEEEEEEecCCC-CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN-Q-----RRIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~ 131 (494)
+++++.+.||+|+||+||+|+... + ..||||.+.... ......|.+|+.++.++ +|||||++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 467788888999999999999532 2 269999986543 23456799999999998 899999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccce
Q 011092 132 LLVAEYMPNETLAKHLFHWE---------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Ni 190 (494)
++|||||+||+|.+++.... ...+++..++.|+.||+.||.|||+++ ||||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhcc
Confidence 99999999999999997432 135899999999999999999999999 99999999999
Q ss_pred eecCCCCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHh
Q 011092 191 LFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLI 263 (494)
Q Consensus 191 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~ 263 (494)
|++.++.+||+|||+++...... ...||+.|||||++.++.++.++|||||||++|||+| |..||.+......
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~ 275 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 275 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999998654332 3456899999999999999999999999999999998 7888865432211
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhc
Q 011092 264 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314 (494)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~ 314 (494)
.... .........|..+++++.+||.+||+.||.+|||+++|++.|.
T Consensus 276 ~~~~----~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 276 FYKL----IQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHH----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHH----HhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 1111 1111122345566789999999999999999999999999885
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.7e-52 Score=407.19 Aligned_cols=247 Identities=18% Similarity=0.157 Sum_probs=208.7
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeecCC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 139 (494)
.|++++.||+|+||+||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|+|||||+
T Consensus 27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~ 106 (350)
T d1koaa2 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 106 (350)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence 577888899999999999995 5699999999976554446778999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec--CCCCeEEcccCCcccCCCCC---c
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK---S 214 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~---~ 214 (494)
||+|.+++.. ..+.+++..+..|+.||+.||.|||++| ||||||||+|||++ .++.+||+|||+++...... .
T Consensus 107 gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 184 (350)
T d1koaa2 107 GGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184 (350)
T ss_dssp SCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence 9999999854 3456999999999999999999999999 99999999999996 46889999999998765433 4
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..||+.|||||++.+..++.++|||||||++|+|+||+.||.+............... .........+++++.+||.+
T Consensus 185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~ 262 (350)
T d1koaa2 185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIRK 262 (350)
T ss_dssp ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCCGGGGGCCHHHHHHHHH
T ss_pred ecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHHH
Confidence 6789999999999999999999999999999999999999976544333222111111 11111223456889999999
Q ss_pred HccCCCCCCCChHHHHH
Q 011092 295 CLQYEPRERPNPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rps~~~vl~ 311 (494)
||+.||.+|||+.++++
T Consensus 263 ~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 263 LLLADPNTRMTIHQALE 279 (350)
T ss_dssp HCCSSGGGSCCHHHHHH
T ss_pred HccCChhHCcCHHHHhc
Confidence 99999999999999998
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-53 Score=392.89 Aligned_cols=250 Identities=25% Similarity=0.358 Sum_probs=201.7
Q ss_pred CccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC-Cccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-~~~~lv~e~ 137 (494)
.+++++++.||+|+||.||+|.+ .|..||||+++... ..+.|.+|++++++++|||||+++|+|.+. +.+++||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 34567888899999999999998 47899999997543 467899999999999999999999999654 568999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Cccc
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 216 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 216 (494)
+++|+|.+++.......+++..+++|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 99999999997544456999999999999999999999998 999999999999999999999999999875433 3456
Q ss_pred cCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 011092 217 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295 (494)
Q Consensus 217 ~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (494)
+|+.|+|||++.++.++.++||||||+++|||+| |+.|+.......+...... ......+...++++.+|+.+|
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~li~~c 236 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYEVMKNC 236 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-----TCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCCHHHHHHHHHH
Confidence 7899999999998999999999999999999999 5655544332222221111 112234556678999999999
Q ss_pred ccCCCCCCCChHHHHHHhcccc
Q 011092 296 LQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 296 l~~dp~~Rps~~~vl~~L~~~~ 317 (494)
|+.||.+|||+.++++.|+.+.
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~ 258 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIK 258 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999998774
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-52 Score=399.68 Aligned_cols=244 Identities=20% Similarity=0.246 Sum_probs=210.1
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
.+++++++.||+|+||.||+|+. .+|+.||||++++. .....+.+.+|+.+|++++|||||++++++.+.+.+|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 35678888899999999999995 56999999999643 223467899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||++||+|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 84 ~ey~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 999999999999874 457999999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....+....... ...+|..+++++.+
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 234 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 3467899999999999999999999999999999999999999876554443322221 11345567789999
Q ss_pred HHHHHccCCCCCCCC-----hHHHHH
Q 011092 291 LASRCLQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps-----~~~vl~ 311 (494)
||.+||++||.+||+ ++++++
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 235 LLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHhhccCCchhhcccccccHHHHHc
Confidence 999999999999995 777775
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-52 Score=395.84 Aligned_cols=246 Identities=15% Similarity=0.153 Sum_probs=206.1
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC------ChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
.|++++.||+|+||+||+|.. .+|+.||||+++..... ..+.|.+|+.+|++++|||||++++++.+.+..||
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 478889999999999999996 56999999999653321 25679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC----CeEEcccCCcccC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 209 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 209 (494)
|||||+||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999974 357999999999999999999999999 99999999999998776 4999999999876
Q ss_pred CCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 210 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 210 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+............... ......+...+.
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCchhcCCCCH
Confidence 543 345789999999999988999999999999999999999999976544333222111110 001111234567
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.+.+||.+||+.||.+|||++++++
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999999987
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.5e-51 Score=395.45 Aligned_cols=243 Identities=19% Similarity=0.230 Sum_probs=210.0
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+++++++.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 4678899999999999999995 56999999999642 2334678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-Cc
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KS 214 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~ 214 (494)
||++||+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ..
T Consensus 84 E~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 84 DYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred eecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 9999999999887 3567899999999999999999999999 999999999999999999999999999876543 45
Q ss_pred cccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011092 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294 (494)
Q Consensus 215 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 294 (494)
..||+.|||||++.+..++.++|||||||++|||+||+.||.......+....... ....|..+++++.+++.+
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~ 234 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSR 234 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHH
Confidence 67999999999999989999999999999999999999999776544333222211 112345567889999999
Q ss_pred HccCCCCCCC-----ChHHHHH
Q 011092 295 CLQYEPRERP-----NPKSLVT 311 (494)
Q Consensus 295 cl~~dp~~Rp-----s~~~vl~ 311 (494)
||+.||.+|+ |++++++
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHT
T ss_pred HhhhCHHhccccchhhHHHHHc
Confidence 9999999995 8999986
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.7e-51 Score=387.93 Aligned_cols=252 Identities=17% Similarity=0.222 Sum_probs=204.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCc----cc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----RL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----~~ 132 (494)
.|++++.||+|+||+||+|.. .+|+.||||+++.....+ ...|.+|+++++.++|||||++++++...+. .|
T Consensus 8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~ 87 (277)
T d1o6ya_ 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 87 (277)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEE
Confidence 478888999999999999995 569999999998755444 3468999999999999999999999987543 78
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 211 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 211 (494)
+||||++|++|.+++.. .+++++..+..|+.||+.||.|||++| |+||||||+|||++.++..+|+|||.+.....
T Consensus 88 lvmE~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 88 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADS 164 (277)
T ss_dssp EEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred EEEECCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhccc
Confidence 99999999999998864 457999999999999999999999999 99999999999999999999999998865432
Q ss_pred ------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhH
Q 011092 212 ------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 285 (494)
Q Consensus 212 ------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (494)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||................ ..........++
T Consensus 165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~s 242 (277)
T d1o6ya_ 165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLS 242 (277)
T ss_dssp --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC--CCCGGGTSSSCC
T ss_pred cccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcC--CCCCchhccCCC
Confidence 224568999999999998899999999999999999999999997654433222221111 111112334566
Q ss_pred HHHHHHHHHHccCCCCCCC-ChHHHHHHhcccc
Q 011092 286 TELVRLASRCLQYEPRERP-NPKSLVTALSPLQ 317 (494)
Q Consensus 286 ~~l~~li~~cl~~dp~~Rp-s~~~vl~~L~~~~ 317 (494)
+++.++|.+||+.||.+|| |+++++..|.++.
T Consensus 243 ~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 243 ADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 8999999999999999998 8999999887654
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5e-51 Score=384.36 Aligned_cols=248 Identities=17% Similarity=0.160 Sum_probs=207.5
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC---------hHHHHHHHHHHhccC-CCCCccEEEEEec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---------PRQFLEEARSVGQLR-NNRLTNLLGCCCE 127 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-hpnIv~l~~~~~~ 127 (494)
|++|++++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.++++++ |||||++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 46788899999999999999995 568999999997654322 235889999999996 9999999999999
Q ss_pred CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 128 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
++..||||||++||+|.+++.. ..++++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999974 457999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC---CccccCCCcCCCcCCCC------CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccC
Q 011092 208 NSRDG---KSYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278 (494)
Q Consensus 208 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (494)
..... ....||+.|+|||.+.+ ..++.++||||+||++|||+||+.||................. ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCC
Confidence 76543 34578999999998753 3478899999999999999999999987654333222211111 1112
Q ss_pred CCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 279 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.....+++++.+|+.+||+.||.+|||+.++++
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 223457789999999999999999999999976
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-51 Score=387.11 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=198.6
Q ss_pred ccccccccCCCCCCCeEEEEEEcC----CCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
+.+++.+.||+|+||+||+|.+.. +..||||.++...... .+.|.+|+.++++++|||||+++|++. .+..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 467788899999999999998542 3568999986544322 467999999999999999999999996 4678999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||+++|+|.+++.. ...++++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 86 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 999999999998764 3467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 213 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 213 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
....||+.|+|||++.+..++.++|||||||++|||+| |.+|+.......+....... .....+..++.++
T Consensus 164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 238 (273)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTCCHHH
T ss_pred eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHH
Confidence 23456899999999998999999999999999999998 77777654333222211111 1123455677899
Q ss_pred HHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 289 VRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999987643
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.4e-51 Score=395.54 Aligned_cols=244 Identities=16% Similarity=0.181 Sum_probs=210.1
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHhccCCCCCccEEEEEecCCcccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++++++++.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+|+.++|||||++++++...+..++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 35788999999999999999995 56999999998642 223467899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-C
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 213 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 213 (494)
|||+.||+|.+++.. .+.+++..+..|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .
T Consensus 120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 999999999999974 357999999999999999999999999 999999999999999999999999999876543 4
Q ss_pred ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011092 214 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (494)
...||+.|||||++.+..++.++|||||||++|||+||+.||.+.....+........ ...+..+++++.+||.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK------VRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC------CCCCccCCHHHHHHHH
Confidence 5679999999999999999999999999999999999999997754433332222111 1234556789999999
Q ss_pred HHccCCCCCC-----CChHHHHH
Q 011092 294 RCLQYEPRER-----PNPKSLVT 311 (494)
Q Consensus 294 ~cl~~dp~~R-----ps~~~vl~ 311 (494)
+||+.||.+| ||++++++
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhhhCHHhccccccccHHHHHc
Confidence 9999999999 48999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-51 Score=390.37 Aligned_cols=257 Identities=22% Similarity=0.279 Sum_probs=208.9
Q ss_pred CCccccccccCCCCCCCeEEEEEEc-CCC--EEEEEEecCCC-CCChHHHHHHHHHHhcc-CCCCCccEEEEEecCCccc
Q 011092 58 GFAVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 58 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 132 (494)
+|+++++.+.||+|+||+||+|.+. +|. .||||.++... ....+.|.+|+++|.++ +|||||+++|+|.+++..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 3566777788899999999999954 444 57888886543 23466899999999999 7999999999999999999
Q ss_pred eeeecCCCCCHHHHhccc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCe
Q 011092 133 LVAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 198 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~ 198 (494)
+||||++||+|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCce
Confidence 999999999999999642 2357999999999999999999999999 9999999999999999999
Q ss_pred EEcccCCcccCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCC-CCCchhHHhhhccccccccc
Q 011092 199 RLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDS 274 (494)
Q Consensus 199 kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p-~~~~~~~~~~~~~~~~~~~~ 274 (494)
||+|||+++..... ....+|..|+|||.+.+..++.++|||||||++|||++|..| +.......+.......
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~---- 242 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---- 242 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT----
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc----
Confidence 99999999765432 344688999999999999999999999999999999998754 5443333322221111
Q ss_pred cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccccC
Q 011092 275 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320 (494)
Q Consensus 275 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~~ 320 (494)
.....+..+++++.+||.+||+.||++|||+.+|++.|+.+....
T Consensus 243 -~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 287 (309)
T d1fvra_ 243 -YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287 (309)
T ss_dssp -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 122345567789999999999999999999999999999887653
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-51 Score=384.52 Aligned_cols=251 Identities=20% Similarity=0.256 Sum_probs=198.2
Q ss_pred CccccccccCCCCCCCeEEEEEEcC--C--CEEEEEEecCCCCCC---hHHHHHHHHHHhccCCCCCccEEEEEecCCcc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLEN--Q--RRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
..++++++.||+|+||.||+|.... + ..||||+++...... .+.|.+|+.++++++|||||+++|++.+ +..
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence 3567889999999999999998532 3 378999997643222 4679999999999999999999999976 467
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
++||||+++|+|.+++... ..++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred heeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhccc
Confidence 8999999999999988653 456999999999999999999999999 99999999999999999999999999987644
Q ss_pred CC-------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCch
Q 011092 212 GK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 283 (494)
Q Consensus 212 ~~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (494)
.. ...++..|+|||++.+..++.++|||||||++|||+| |+.||............... ......+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~ 239 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPED 239 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTT
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhC----CCCCCCccc
Confidence 32 2346789999999999999999999999999999998 78888765444332222111 111233456
Q ss_pred hHHHHHHHHHHHccCCCCCCCChHHHHHHhccc
Q 011092 284 DGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316 (494)
Q Consensus 284 ~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~ 316 (494)
++..+.+|+.+||+.||++|||+.+|++.|+..
T Consensus 240 ~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 678999999999999999999999999988754
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.5e-51 Score=389.24 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=207.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCCC-hHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
+++++++.||+|+||+||+|+.. +++.||||+++...... .++|.+|++++++++||||++++++|...+..+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 35678888899999999999853 35789999997644322 467999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhcccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccce
Q 011092 133 LVAEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 190 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Ni 190 (494)
+||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+++ +|||||||+||
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NI 171 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNC 171 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGE
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccce
Confidence 9999999999999986321 235889999999999999999999999 99999999999
Q ss_pred eecCCCCeEEcccCCcccCCC------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCC-CCCCchhHHh
Q 011092 191 LFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLI 263 (494)
Q Consensus 191 ll~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~-p~~~~~~~~~ 263 (494)
|++.++.+||+|||+++.... .....+|+.|+|||.+.+..+|.++|||||||++|||++|.. ||.......+
T Consensus 172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~ 251 (301)
T d1lufa_ 172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 251 (301)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred EECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH
Confidence 999999999999999875432 124567889999999999999999999999999999999964 5544333322
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccc
Q 011092 264 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317 (494)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~ 317 (494)
....... . ....+..++.++.+|+.+||+.||.+|||+.+|++.|+++.
T Consensus 252 ~~~v~~~----~-~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 252 IYYVRDG----N-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HHHHHTT----C-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHHcC----C-CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 2211111 1 12335566789999999999999999999999999998764
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-50 Score=392.09 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=198.7
Q ss_pred cccccccc-CCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhcc-CCCCCccEEEEEec----CCccc
Q 011092 60 AVENIVSE-HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE----GDERL 132 (494)
Q Consensus 60 ~~~~~i~~-lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~----~~~~~ 132 (494)
+.|+++++ ||+|+||+||+|.. .+|+.||||+++. ...+.+|+.++.++ +|||||++++++.+ ...+|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 35677765 89999999999995 5699999999963 35688999987665 89999999999865 45689
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC---CCCeEEcccCCcccC
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNS 209 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgla~~~ 209 (494)
+|||||+||+|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceeeec
Confidence 9999999999999997655567999999999999999999999999 999999999999985 567999999999865
Q ss_pred CCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccccc--ccCCCCchh
Q 011092 210 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC--LEGQFTDDD 284 (494)
Q Consensus 210 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 284 (494)
... ....||+.|||||++.+..++.++|||||||++|+|+||+.||.+.............+.... .+......+
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 433 356789999999999998999999999999999999999999865432211111111111111 111112245
Q ss_pred HHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 285 GTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 285 ~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
++++.+||.+||+.||.+|||+.++++
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 688999999999999999999999987
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-51 Score=392.31 Aligned_cols=251 Identities=18% Similarity=0.247 Sum_probs=203.1
Q ss_pred ccccccccCCCCCCCeEEEEEEc-CCC----EEEEEEecCCC-CCChHHHHHHHHHHhccCCCCCccEEEEEecCCccce
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE-NQR----RIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 133 (494)
+++++++.||+|+||+||+|.+. +|+ .||+|.++... ....++|.+|+.++++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 45788888999999999999953 454 68999987543 33467899999999999999999999999865 5678
Q ss_pred eeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC
Q 011092 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 213 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 213 (494)
+|||+.+|+|.+.+.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 4567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 214 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 214 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
...||+.|+|||++.++.++.++|||||||++|||+| |..||.......+...... ......|..++.
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~-----~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-----GERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHH-----TCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCH
Confidence 2357899999999999999999999999999999999 6666654433222211111 111233456678
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+.+|+.+||+.||.+|||+.+++..|..+..
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999887654
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-51 Score=391.23 Aligned_cols=248 Identities=15% Similarity=0.192 Sum_probs=207.2
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
|+.|++++.||+|+||+||+|.. .+|+.||||+++... .+...+.+|+++|++++|||||++++++.+++.+|+||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 67789999999999999999995 468899999997643 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC--CCCeEEcccCCcccCCCCC--
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~-- 213 (494)
|+||+|.+++.. .+..+++.++..|+.||+.||.|||++| |+||||||+|||++. .+.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 999999999964 2347999999999999999999999999 999999999999984 4589999999998765433
Q ss_pred -ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 011092 214 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (494)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||.................. ........++.++.+||
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 238 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CChhhccCCCHHHHHHH
Confidence 346789999999999889999999999999999999999999776544332222111100 00011123567899999
Q ss_pred HHHccCCCCCCCChHHHHH
Q 011092 293 SRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 293 ~~cl~~dp~~Rps~~~vl~ 311 (494)
.+||..||.+|||+.++++
T Consensus 239 ~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 239 DRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=386.96 Aligned_cols=250 Identities=19% Similarity=0.208 Sum_probs=196.5
Q ss_pred ccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC-----hHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 64 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
.|+.||+|+||+||+|.. .+|+.||||+++...... .+.+.+|+.++++++|||||++++++..++..++||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 456779999999999995 569999999996543221 35689999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
+.|+++..+.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 99887776664 3567999999999999999999999999 999999999999999999999999999765432 2
Q ss_pred ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------cc------cccccC
Q 011092 214 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------LT------DSCLEG 278 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~--------~~------~~~~~~ 278 (494)
...||+.|+|||++.+. .++.++|||||||++|||+||..||............... .. ......
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 45689999999998754 5799999999999999999999888764332211110000 00 000000
Q ss_pred --------CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 279 --------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 279 --------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
......++++.+|+.+||+.||++|||++++++ .++..
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~--Hp~f~ 284 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK--MKYFS 284 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT--SGGGT
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC--CHhhC
Confidence 011234578999999999999999999999987 44443
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-50 Score=387.94 Aligned_cols=243 Identities=19% Similarity=0.257 Sum_probs=205.7
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCC---CCCChHHHHHHHHHHh-ccCCCCCccEEEEEecCCcccee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVG-QLRNNRLTNLLGCCCEGDERLLV 134 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~hpnIv~l~~~~~~~~~~~lv 134 (494)
++|++++.||+|+||+||+|+. .+|+.||||+++.. .....+.+..|..++. .++|||||++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 4677888999999999999995 46999999999642 2234567778888766 57999999999999999999999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC--
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 212 (494)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 999999999999974 456999999999999999999999999 999999999999999999999999999864432
Q ss_pred --CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHH
Q 011092 213 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 290 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (494)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.....+....... ...+|..+++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHH
Confidence 3457899999999999999999999999999999999999999876544433322211 11334566789999
Q ss_pred HHHHHccCCCCCCCChH-HHHH
Q 011092 291 LASRCLQYEPRERPNPK-SLVT 311 (494)
Q Consensus 291 li~~cl~~dp~~Rps~~-~vl~ 311 (494)
||.+||+.||.+|||+. ++++
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHHhcccCCCCCcCHHHHHHh
Confidence 99999999999999996 6764
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.3e-50 Score=393.42 Aligned_cols=247 Identities=19% Similarity=0.183 Sum_probs=200.4
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCC---CCChHHHHHH---HHHHhccCCCCCccEEEEEecCCcc
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEE---ARSVGQLRNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~hpnIv~l~~~~~~~~~~ 131 (494)
.+++++++.||+|+||.||+|+. .+|+.||||++.... ......+.+| +.+++.++|||||++++++...+..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 35677888889999999999995 469999999985421 1223344444 6777788899999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
|+||||++||+|.+++.. ...+++..+..|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++....
T Consensus 83 ~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999999974 456899999999999999999999999 99999999999999999999999999986654
Q ss_pred C--CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHH
Q 011092 212 G--KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 288 (494)
Q Consensus 212 ~--~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (494)
. ....||+.|+|||++.. ..++.++|||||||++|||+||+.||............ ... .......+..+++++
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~-~~~--~~~~~~~~~~~s~~~ 236 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMT--LTMAVELPDSFSPEL 236 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH-HHS--SSCCCCCCSSSCHHH
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH-Hhc--ccCCCCCCCCCCHHH
Confidence 3 35679999999999875 45899999999999999999999998654321111100 000 011123345677899
Q ss_pred HHHHHHHccCCCCCCCC-----hHHHHH
Q 011092 289 VRLASRCLQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 289 ~~li~~cl~~dp~~Rps-----~~~vl~ 311 (494)
.+||.+||+.||.+||| ++++++
T Consensus 237 ~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 237 RSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp HHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred HHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 99999999999999999 578875
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-50 Score=382.81 Aligned_cols=253 Identities=22% Similarity=0.293 Sum_probs=205.2
Q ss_pred ccccccccCCCCCCCeEEEEEEcC--------CCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCC
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 129 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 129 (494)
+.+++++.||+|+||.||+|+... +..||||+++..... ....+.+|+..+.++ +|||||+++++|.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 578888999999999999998422 247999999765432 246788999999999 8999999999999999
Q ss_pred ccceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ ||||||||+|||++.+
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~ 171 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 171 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTT
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCC
Confidence 9999999999999999997432 245899999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHh-CCCCCCCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~ 268 (494)
+.+||+|||+++..... ....+|+.|+|||.+.++.++.++||||||||+|||+| |..||.......+.....
T Consensus 172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~ 251 (299)
T d1fgka_ 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 251 (299)
T ss_dssp CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHH
Confidence 99999999998855332 23567899999999999999999999999999999998 566665544333222111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.......+...++++.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus 252 -----~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 252 -----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp -----TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----cCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 112223455667899999999999999999999999999987743
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-50 Score=386.18 Aligned_cols=255 Identities=22% Similarity=0.275 Sum_probs=196.4
Q ss_pred CccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecC-C
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-D 129 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~-~ 129 (494)
.+++++++.||+|+||.||+|... +++.||||+++..... ..+.+.+|+.++.++ +|+|||.+++++... +
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 356888899999999999999853 2468999999754432 255788888888888 789999999998764 4
Q ss_pred ccceeeecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
..++|||||++|+|.+++.... ...+++..+..++.||+.||.|||+++ ||||||||+||||+++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~ 170 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 170 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGG
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCC
Confidence 6899999999999999996421 235889999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCC-CCCCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~-p~~~~~~~~~~~~~~ 268 (494)
+.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||.. ||.............
T Consensus 171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~ 250 (299)
T d1ywna1 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 250 (299)
T ss_dssp GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999999754332 23468999999999999999999999999999999999865 454322111110000
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
........+..+++++.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus 251 ----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 251 ----KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp ----HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----hcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0111123445567899999999999999999999999999987643
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=381.58 Aligned_cols=248 Identities=24% Similarity=0.312 Sum_probs=200.4
Q ss_pred ccCCCCCCCeEEEEEEcC--C--CEEEEEEecCCCC-CChHHHHHHHHHHhccCCCCCccEEEEEec-CCccceeeecCC
Q 011092 66 SEHGEKAPNVVYKGKLEN--Q--RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEYMP 139 (494)
Q Consensus 66 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~e~~~ 139 (494)
..||+|+||+||+|.+.+ + ..||||+++.... ...++|.+|++++++++|||||+++|++.. ++..++||||++
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 356999999999999643 2 3689999975332 235679999999999999999999999876 457899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC-------
Q 011092 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 212 (494)
Q Consensus 140 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------- 212 (494)
+|+|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999998864 3456888999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 011092 213 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291 (494)
Q Consensus 213 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 291 (494)
....||+.|+|||.+.+..++.++||||||+++|||+||+.||........ ....+... .....|..++.++.+|
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~---~~~~i~~g-~~~~~p~~~~~~l~~l 266 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQG-RRLLQPEYCPDPLYEV 266 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHHHHTT-CCCCCCTTCCHHHHHH
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH---HHHHHHcC-CCCCCcccCcHHHHHH
Confidence 124578999999999989999999999999999999998888765321110 00000111 1122344566889999
Q ss_pred HHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 292 ASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 292 i~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+.+||+.||++|||+.+|++.|+.+...
T Consensus 267 i~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 267 MLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999988654
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-49 Score=375.81 Aligned_cols=250 Identities=20% Similarity=0.270 Sum_probs=198.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
++|++++.||+|+||+||+|.. .+|+.||||+++.... ...+++.+|++++++++|||||++++++.+++..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 4677888899999999999995 5699999999965432 235789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 212 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 212 (494)
|+.+ ++.+++.......+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9974 5555554445667999999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------cccccc--c
Q 011092 213 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------QMLTDS--C 275 (494)
Q Consensus 213 ~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--------------~~~~~~--~ 275 (494)
....||+.|+|||.+.... ++.++|||||||++|+|++|+.||.+........... ...... .
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3457899999999877665 5789999999999999999999987543221110000 000000 0
Q ss_pred ccCC-------CCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 276 LEGQ-------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 276 ~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.... .....+.++.+|+.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~ 282 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0000 01234578999999999999999999999997
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-49 Score=380.68 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=207.6
Q ss_pred ccccccccCCCCCCCeEEEEEEc------CCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCccc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 132 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 132 (494)
+++++.+.||+|+||+||+|.+. +++.||||+++..... ....|.+|+.++++++|||||+++|+|..++..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 45678888999999999999853 2578999999754322 2346899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhccc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccC
Q 011092 133 LVAEYMPNETLAKHLFHW--------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 204 (494)
+||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecc
Confidence 999999999999988642 1245789999999999999999999998 9999999999999999999999999
Q ss_pred CcccCCCC------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCC-CCCCCchhHHhhhcccccccccccc
Q 011092 205 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLE 277 (494)
Q Consensus 205 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (494)
+++..... ....+|+.|+|||.+.+..++.++||||||+++|||+||. .|+.......+...... . ..
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~----~-~~ 253 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME----G-GL 253 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT----T-CC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----C-CC
Confidence 99865432 2335789999999999999999999999999999999996 44544333222221111 1 11
Q ss_pred CCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 278 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
...+..++..+.+++.+||+.||.+|||+.+|++.|+....
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 22345566899999999999999999999999999987643
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-49 Score=382.68 Aligned_cols=254 Identities=20% Similarity=0.301 Sum_probs=207.1
Q ss_pred ccccccccCCCCCCCeEEEEEE------cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhcc-CCCCCccEEEEEecCCcc
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 131 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~ 131 (494)
+++++.+.||+|+||.||+|++ .+++.||||+++..... ....|.+|+.++.++ +|||||+++++|.+.+..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 4677788899999999999985 23578999999765432 245789999999999 799999999999999999
Q ss_pred ceeeecCCCCCHHHHhcccC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCC
Q 011092 132 LLVAEYMPNETLAKHLFHWE----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~ 195 (494)
++|||||+||+|.+++.... ...+++..+..|+.||+.||+|||+++ ++||||||+|||++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccccccccccccc
Confidence 99999999999999987432 236899999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCcccCCCCC------ccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCC-CCchhHHhhhccc
Q 011092 196 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNL 268 (494)
Q Consensus 196 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~-~~~~~~~~~~~~~ 268 (494)
+.+||+|||+++...... ...||+.|+|||++.++.++.++|||||||++|||+|++.|+ ..........
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~--- 258 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--- 258 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH---
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH---
Confidence 999999999998655432 346789999999999899999999999999999999955454 3322111111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 269 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+.........+...+..+.+||.+||+.||.+|||+.+|++.|++...
T Consensus 259 -~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 259 -KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp -HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 1111112223344566899999999999999999999999999987643
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.6e-48 Score=370.70 Aligned_cols=249 Identities=17% Similarity=0.238 Sum_probs=200.7
Q ss_pred ccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeeec
Q 011092 60 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 137 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 137 (494)
+.|++++.||+|+||+||+|...+|+.||||+++.... ...+.|.+|+.+|++++|||||++++++..++..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 46788899999999999999988899999999965432 2357899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCC----C
Q 011092 138 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 213 (494)
Q Consensus 138 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 213 (494)
+.++.+..+.. ..+.+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 98777766654 4567999999999999999999999999 999999999999999999999999998765432 3
Q ss_pred ccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccc--------------cc--------
Q 011092 214 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------QM-------- 270 (494)
Q Consensus 214 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~--------------~~-------- 270 (494)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||............. ..
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 44678999999998754 46899999999999999999999986542211111000 00
Q ss_pred -cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 -~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..............+..+.+|+.+||+.||++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000111223345678999999999999999999999985
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-49 Score=376.86 Aligned_cols=250 Identities=17% Similarity=0.225 Sum_probs=192.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHH--HHHhccCCCCCccEEEEEecCC----ccceee
Q 011092 62 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEA--RSVGQLRNNRLTNLLGCCCEGD----ERLLVA 135 (494)
Q Consensus 62 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~hpnIv~l~~~~~~~~----~~~lv~ 135 (494)
+.+.++||+|+||.||+|++ +|+.||||+++... .+.+.+|. ..+.+++|||||+++++|...+ ..|+||
T Consensus 5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 44556789999999999997 67899999996432 34454454 4556789999999999998754 478999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh--------cCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 136 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
||+++|+|.+++.. .++++..++.++.|++.||.|||+ ++ |+||||||+||||+.++.+||+|||+++
T Consensus 81 Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccc
Confidence 99999999999963 469999999999999999999997 46 9999999999999999999999999988
Q ss_pred cCCCC--------CccccCCCcCCCcCCCCCC------CCCCCCchhHHHHHHHHHhCCCCCCCchh-------------
Q 011092 208 NSRDG--------KSYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGKHIPPSHAL------------- 260 (494)
Q Consensus 208 ~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~sDv~slG~vl~elltg~~p~~~~~~------------- 260 (494)
..... ....||+.|+|||++.+.. ++.++|||||||+||||+||..|+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 65332 2356899999999987542 57789999999999999999866532110
Q ss_pred --HHhhhccccccccccccCC-CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 261 --DLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 261 --~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
..+..........+..+.. .+...+..+.+|+.+||+.||.+|||+.+|++.|+.+..+
T Consensus 237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 1111111111111111111 1223556799999999999999999999999999988654
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-49 Score=372.03 Aligned_cols=236 Identities=19% Similarity=0.287 Sum_probs=197.6
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC------ChHHHHHHHHHHhccC--CCCCccEEEEEecCCcc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~ 131 (494)
.|++.+.||+|+||+||+|+. .+|+.||||++...... ...++.+|+.++++++ |||||++++++.+++..
T Consensus 5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~ 84 (273)
T d1xwsa_ 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 84 (273)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence 567778889999999999995 56999999999753322 2345779999999996 89999999999999999
Q ss_pred ceeeecCCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-CCCeEEcccCCcccC
Q 011092 132 LLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNS 209 (494)
Q Consensus 132 ~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgla~~~ 209 (494)
++||||+.+ +++.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..
T Consensus 85 ~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~ 161 (273)
T d1xwsa_ 85 VLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALL 161 (273)
T ss_dssp EEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccceec
Confidence 999999976 678787763 457999999999999999999999999 999999999999985 578999999999865
Q ss_pred CCC--CccccCCCcCCCcCCCCCCC-CCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCchhHH
Q 011092 210 RDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286 (494)
Q Consensus 210 ~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (494)
... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||..... +.... ..++..+++
T Consensus 162 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~~----------~~~~~~~s~ 229 (273)
T d1xwsa_ 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQ----------VFFRQRVSS 229 (273)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCC----------CCCSSCCCH
T ss_pred ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--Hhhcc----------cCCCCCCCH
Confidence 443 35679999999999987665 5679999999999999999999875421 11111 123345668
Q ss_pred HHHHHHHHHccCCCCCCCChHHHHH
Q 011092 287 ELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 287 ~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
++.+||.+||+.||.+|||++++++
T Consensus 230 ~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 230 ECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCCHhHCcCHHHHhc
Confidence 8999999999999999999999987
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-48 Score=371.75 Aligned_cols=250 Identities=20% Similarity=0.224 Sum_probs=198.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-cC-CCEEEEEEecCCC--CCChHHHHHHHHHHhcc---CCCCCccEEEEEec-----
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-EN-QRRIAVKRFNRMA--WPDPRQFLEEARSVGQL---RNNRLTNLLGCCCE----- 127 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~----- 127 (494)
+.|++++.||+|+||+||+|.. .+ ++.||||+++... ......+.+|+.+++.+ +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 4688999999999999999996 44 5679999996532 22345677888887776 79999999999863
Q ss_pred CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcc
Q 011092 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207 (494)
Q Consensus 128 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 207 (494)
....+++|||+.++++..... .....+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhh
Confidence 346799999999776654443 24567999999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCC---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc--------------
Q 011092 208 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-------------- 270 (494)
Q Consensus 208 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~-------------- 270 (494)
..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...............
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence 65432 3567899999999999999999999999999999999999999765322211110000
Q ss_pred -------cccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 -------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 -------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..........+...++.+.+|+.+||+.||.+|||+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000111223456688999999999999999999999987
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-46 Score=363.82 Aligned_cols=258 Identities=17% Similarity=0.199 Sum_probs=198.2
Q ss_pred cCCccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCC--CChHHHHHHHHHHhccCCCCCccEEEEEec------
Q 011092 57 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE------ 127 (494)
Q Consensus 57 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------ 127 (494)
+..+.|++++.||+|+||+||+|+. .+|+.||||++..... .....+.+|+.+|++++||||+++++++..
T Consensus 7 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 7 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86 (318)
T ss_dssp CBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred CccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence 3456788999999999999999995 5799999999865432 235678999999999999999999999865
Q ss_pred --CCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCC
Q 011092 128 --GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 128 --~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
.+..++||||+.++++..... ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecce
Confidence 345789999998777665543 4567999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCC--------CCccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccc---cc
Q 011092 206 MKNSRD--------GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---TD 273 (494)
Q Consensus 206 a~~~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~---~~ 273 (494)
++.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.............. ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 975442 1234689999999998765 58999999999999999999999886543222111100000 00
Q ss_pred cc--------c------cCCCCc---------hhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 274 SC--------L------EGQFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 274 ~~--------~------~~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
.. . ...... ..++.+.+||.+||+.||++|||++++++ +++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~--Hpff~~ 310 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWS 310 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGSS
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc--Chhhcc
Confidence 00 0 000000 11356788999999999999999999997 556543
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-47 Score=368.23 Aligned_cols=247 Identities=17% Similarity=0.226 Sum_probs=191.9
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC-ChHHHHHHHHHHhccCCCCCccEEEEEecCCc----ccee
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----RLLV 134 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----~~lv 134 (494)
.|++++.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|+.+|++++||||+++++++..... .+++
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l 88 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 88 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence 478999999999999999995 57999999999754322 24578999999999999999999999976542 3455
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC---
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 211 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 211 (494)
++|+.||+|.+++.. .++++..+..++.||+.||+|||++| ||||||||+|||++.++.+||+|||+++....
T Consensus 89 ~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 89 VTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp EEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred EEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 566779999999953 46999999999999999999999999 99999999999999999999999999875432
Q ss_pred ----CCccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc----------------
Q 011092 212 ----GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---------------- 270 (494)
Q Consensus 212 ----~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~---------------- 270 (494)
.....||+.|+|||++.. ..++.++||||+||++++|++|+.||...............
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence 234568899999999854 45788999999999999999999998654321111100000
Q ss_pred -------ccc--ccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 271 -------LTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 271 -------~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
... ...........+.++.+|+.+||+.||.+|||+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 00000011234568999999999999999999999997
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-46 Score=367.31 Aligned_cols=245 Identities=18% Similarity=0.247 Sum_probs=193.0
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCC--hHHHHHHHHHHhccCCCCCccEEEEEecCC------cc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~ 131 (494)
.|++++.||+|+||+||+|.. .+|+.||||+++...... .+.+.+|+++|++++|||||+++++|...+ ..
T Consensus 19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 98 (346)
T d1cm8a_ 19 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 98 (346)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred cEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence 578889999999999999995 569999999997643322 457889999999999999999999998755 46
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
|+||||+ +.+|..++. ...+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++....
T Consensus 99 ~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 99 YLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp EEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccCC
Confidence 9999999 578888774 357999999999999999999999999 99999999999999999999999999987654
Q ss_pred C-CccccCCCcCCCcCCCCC-CCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc----------------------
Q 011092 212 G-KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------- 267 (494)
Q Consensus 212 ~-~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~---------------------- 267 (494)
. ....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||............
T Consensus 174 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (346)
T d1cm8a_ 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 253 (346)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhh
Confidence 3 356789999999998764 4689999999999999999999988654221110000
Q ss_pred ----ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 ----LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 ----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
........ ........++++.+||.+||..||.+|||+.++++
T Consensus 254 ~~~~~~~~~~~~-~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 254 YMKGLPELEKKD-FASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp HHHHSCCCCCCC-GGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhccCCcccccc-hHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000000 01122345678999999999999999999999998
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-46 Score=354.77 Aligned_cols=249 Identities=18% Similarity=0.209 Sum_probs=202.1
Q ss_pred ccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecCCccceeee
Q 011092 60 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 136 (494)
Q Consensus 60 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 136 (494)
..|++++.||+|+||+||+|+. .+|+.||||+++..... ...++.+|+.+++.++||||+++++++...+..++|++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 4678899999999999999995 56899999999765432 25788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCCCC---
Q 011092 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 213 (494)
Q Consensus 137 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 213 (494)
++.+++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++......
T Consensus 82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 999999988776 4567899999999999999999999999 9999999999999999999999999998755432
Q ss_pred -ccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCc-hhHHhhhcc-----------------------
Q 011092 214 -SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRN----------------------- 267 (494)
Q Consensus 214 -~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~-~~~~~~~~~----------------------- 267 (494)
...+++.|+|||.+.+.. ++.++|||||||++|||++|+.||... .........
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 345678899999987665 689999999999999999999886432 111100000
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.................++.+.+|+.+||+.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000001111233445678999999999999999999999987
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-46 Score=362.91 Aligned_cols=246 Identities=21% Similarity=0.227 Sum_probs=191.1
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCccEEEEEecC------Cccce
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERLL 133 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~~~l 133 (494)
.|+.++.||+|+||+||+|+. .+|+.||||++..... .+.+|+.+|++++||||+++++++... ...+|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 456667789999999999996 4699999999976432 234799999999999999999998543 24689
Q ss_pred eeecCCCCCHHHHhcc-cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCC
Q 011092 134 VAEYMPNETLAKHLFH-WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD 211 (494)
Q Consensus 134 v~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 211 (494)
||||++++.+..+... .....+++..+..|+.||+.||+|||++| |+||||||+|||++.++ .+||+|||+++....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 9999986544433321 24567999999999999999999999999 99999999999999765 899999999986543
Q ss_pred C---CccccCCCcCCCcCCCC-CCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc--------------------
Q 011092 212 G---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------- 267 (494)
Q Consensus 212 ~---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~-------------------- 267 (494)
. ....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||............
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 2 35678999999998765 46899999999999999999999998654322111100
Q ss_pred ---ccccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 268 ---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 268 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
.................++++.+|+.+||+.||.+|||+.++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000001111122345678999999999999999999999996
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=7.3e-46 Score=359.44 Aligned_cols=244 Identities=17% Similarity=0.226 Sum_probs=195.9
Q ss_pred CccccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEecC--Ccccee
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEG--DERLLV 134 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~--~~~~lv 134 (494)
.+++++++.||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+.+|..++ ||||+++++++... ...++|
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v 110 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 110 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence 45788999999999999999995 56999999999753 3678999999999995 99999999999753 468999
Q ss_pred eecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCC-CeEEcccCCcccCCCC-
Q 011092 135 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG- 212 (494)
Q Consensus 135 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~- 212 (494)
|||+.+++|..+. +.+++..+..++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+++.....
T Consensus 111 ~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~ 184 (328)
T d3bqca1 111 FEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184 (328)
T ss_dssp EECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred EeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCCC
Confidence 9999999997754 45999999999999999999999999 99999999999998655 5999999999865533
Q ss_pred --CccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHH------------------hhhcccc--
Q 011092 213 --KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDL------------------IRDRNLQ-- 269 (494)
Q Consensus 213 --~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~------------------~~~~~~~-- 269 (494)
....+|+.|+|||.+.+.. ++.++||||+||++++|++|+.||....... .......
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 264 (328)
T d3bqca1 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264 (328)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence 3456899999999987654 7999999999999999999999885431110 0000000
Q ss_pred ------------ccccccccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHH
Q 011092 270 ------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 311 (494)
Q Consensus 270 ------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~ 311 (494)
..............+++++.+||.+||..||.+|||++++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000001111122345678999999999999999999999987
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-46 Score=357.69 Aligned_cols=253 Identities=15% Similarity=0.144 Sum_probs=197.1
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCC-ccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lv~e~~ 138 (494)
.|++++.||+|+||+||+|.. .+|+.||||++.... ...++..|+++++.++|+|+ +.+.+++..++..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 477888999999999999995 568999999987644 23568899999999977665 55556667778889999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeec---CCCCeEEcccCCcccCCCC---
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG--- 212 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~--- 212 (494)
. ++|.+.+.. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++ .+..+||+|||+++.....
T Consensus 86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 G-PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp C-CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred C-Cchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 5 677766643 4567999999999999999999999999 99999999999975 4567999999999865432
Q ss_pred --------CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcc--ccccccccccCCCCc
Q 011092 213 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--LQMLTDSCLEGQFTD 282 (494)
Q Consensus 213 --------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 282 (494)
....||+.|||||.+.+..++.++|||||||++|||+||+.||............ .............+.
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence 2446899999999999988999999999999999999999998653222111100 000000000111223
Q ss_pred hhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 283 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
.+++++.+++.+||+.+|.+||++.++.+.|+.+..
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 456789999999999999999999999988887644
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=4.4e-46 Score=354.42 Aligned_cols=254 Identities=15% Similarity=0.149 Sum_probs=203.4
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccCC-CCCccEEEEEecCCccceeeecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAEYM 138 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~lv~e~~ 138 (494)
.|++++.||+|+||+||+|+. .+|+.||||++.... ....+.+|++++..++| +||+.+++++..+...++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 467788889999999999995 468999999986543 34567889999999965 89999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecC-----CCCeEEcccCCcccCCC--
Q 011092 139 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRD-- 211 (494)
Q Consensus 139 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~-----~~~~kl~Dfgla~~~~~-- 211 (494)
+++|.+++.. ....+++..+..++.|++.||+|||++| |+||||||+|||++. ++.+||+|||+++....
T Consensus 84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 6999998864 4467999999999999999999999999 999999999999974 57899999999986432
Q ss_pred ---------CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhh--ccccccccccccCCC
Q 011092 212 ---------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQF 280 (494)
Q Consensus 212 ---------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~ 280 (494)
.....||+.|||||++.+..++.++|||||||++|||+||+.||.......... ...............
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 224568999999999999899999999999999999999999986432110000 000000000011112
Q ss_pred CchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcccccc
Q 011092 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319 (494)
Q Consensus 281 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~~ 319 (494)
+..+|+++.+++..|+..+|++||+++.+.+.|+.+...
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence 234557899999999999999999999999888876544
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-46 Score=360.85 Aligned_cols=248 Identities=18% Similarity=0.232 Sum_probs=200.7
Q ss_pred CccccccccCCCCCCCeEEEEEE-c---CCCEEEEEEecCCC----CCChHHHHHHHHHHhccCC-CCCccEEEEEecCC
Q 011092 59 FAVENIVSEHGEKAPNVVYKGKL-E---NQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGD 129 (494)
Q Consensus 59 ~~~~~~i~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~ 129 (494)
.+++++++.||+|+||+||+|.. . +|+.||||.++... ....+.+.+|+.++++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 45688888999999999999984 2 47899999986432 2235678899999999966 89999999999999
Q ss_pred ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccC
Q 011092 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 209 (494)
..++||||+.||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhh
Confidence 99999999999999999974 356788999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-----CccccCCCcCCCcCCCCCC--CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccccccccccCCCCc
Q 011092 210 RDG-----KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282 (494)
Q Consensus 210 ~~~-----~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (494)
... ....|++.|++||.+.+.. ++.++|||||||+||+|+||+.||.................. .....+.
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~~ 257 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 257 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCcc
Confidence 432 3456889999999987653 688999999999999999999998654322111111111111 1122345
Q ss_pred hhHHHHHHHHHHHccCCCCCCCC-----hHHHHH
Q 011092 283 DDGTELVRLASRCLQYEPRERPN-----PKSLVT 311 (494)
Q Consensus 283 ~~~~~l~~li~~cl~~dp~~Rps-----~~~vl~ 311 (494)
..+.++.+|+.+||++||.+||| ++++++
T Consensus 258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 67789999999999999999995 778875
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-45 Score=358.07 Aligned_cols=252 Identities=16% Similarity=0.193 Sum_probs=195.9
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC-----Cccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 132 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~~~~ 132 (494)
.|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||++++++... ...+
T Consensus 19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~ 98 (348)
T d2gfsa1 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 98 (348)
T ss_dssp TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence 588899999999999999995 56999999999765432 245788999999999999999999998643 3346
Q ss_pred eeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC-
Q 011092 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 211 (494)
Q Consensus 133 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 211 (494)
++|+|+.||+|.+++. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+|++|||++.....
T Consensus 99 ~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 99 YLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp EEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred EEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCcc
Confidence 7778888999999984 457999999999999999999999999 99999999999999999999999999876543
Q ss_pred CCccccCCCcCCCcCCCCCC-CCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhcccccccc-----------------
Q 011092 212 GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD----------------- 273 (494)
Q Consensus 212 ~~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~----------------- 273 (494)
.....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.+................
T Consensus 175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 254 (348)
T d2gfsa1 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254 (348)
T ss_dssp GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH
T ss_pred cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhh
Confidence 24567889999999876654 688999999999999999999998764322111110000000
Q ss_pred -----ccccC---CCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 274 -----SCLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 274 -----~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
..... ......++++.+||.+||+.||.+|||+.++++ .++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~--Hp~f~ 305 (348)
T d2gfsa1 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA--HAYFA 305 (348)
T ss_dssp HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGT
T ss_pred hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc--CHhhC
Confidence 00000 001234578999999999999999999999997 34443
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-45 Score=356.40 Aligned_cols=250 Identities=16% Similarity=0.217 Sum_probs=189.5
Q ss_pred cccccccCCCCCCCeEEEEEEc-CCCEEEEEEecCCCCC--ChHHHHHHHHHHhccCCCCCccEEEEEecC------Ccc
Q 011092 61 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DER 131 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~~ 131 (494)
.|++++.||+|+||+||+|... +|+.||||++...... ...++.+|+.++++++|||||++++++... +..
T Consensus 18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~ 97 (355)
T d2b1pa1 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 97 (355)
T ss_dssp TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCcee
Confidence 5888999999999999999954 6999999999765432 245688999999999999999999999643 568
Q ss_pred ceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCCcccCCC
Q 011092 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 211 (494)
Q Consensus 132 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 211 (494)
|+||||+.++.+ +.+. ..+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+|++|||+++....
T Consensus 98 ~iv~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 98 YLVMELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp EEEEECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEEeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhcccc
Confidence 999999975544 4442 45899999999999999999999999 99999999999999999999999999876543
Q ss_pred C---CccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhHHhhhccccc------------------
Q 011092 212 G---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------ 270 (494)
Q Consensus 212 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~------------------ 270 (494)
. ....+|+.|+|||++.+..++.++||||+||++++|++|+.||.+.............
T Consensus 172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T d2b1pa1 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_dssp ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence 2 3456899999999999989999999999999999999999988654322111100000
Q ss_pred ----------------cccccccCC--CCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhccccc
Q 011092 271 ----------------LTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318 (494)
Q Consensus 271 ----------------~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~~~~ 318 (494)
......... .....+.++.+|+.+||..||++|||++++++ +++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~--Hpw~~ 315 (355)
T d2b1pa1 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ--HPYIN 315 (355)
T ss_dssp HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT--STTTG
T ss_pred HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc--CcccC
Confidence 000000000 11234678999999999999999999999997 44443
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.2e-39 Score=317.16 Aligned_cols=254 Identities=18% Similarity=0.215 Sum_probs=190.2
Q ss_pred cccccccCCCCCCCeEEEEEE-cCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-----------CCCCccEEEEEecC
Q 011092 61 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----------NNRLTNLLGCCCEG 128 (494)
Q Consensus 61 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------hpnIv~l~~~~~~~ 128 (494)
.|++++.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+.+++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 488999999999999999995 5799999999975431 2456788999988875 57899999988653
Q ss_pred --CccceeeecCCCCC-HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccccccccceeecCCCC------e
Q 011092 129 --DERLLVAEYMPNET-LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN------P 198 (494)
Q Consensus 129 --~~~~lv~e~~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~ivH~Dlkp~Nill~~~~~------~ 198 (494)
...+++|+++..+. ............+++..+..++.||+.||.|||+ .| |+||||||+|||++.++. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCccccccee
Confidence 34556666655443 3333333355678999999999999999999998 77 999999999999986553 9
Q ss_pred EEcccCCcccCCC-CCccccCCCcCCCcCCCCCCCCCCCCchhHHHHHHHHHhCCCCCCCchhH-------Hh-------
Q 011092 199 RLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------LI------- 263 (494)
Q Consensus 199 kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p~~~~~~~-------~~------- 263 (494)
+++|||.+..... .....||+.|+|||++.+..++.++||||+||++++|++|+.||...... .+
T Consensus 172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 9999999876543 34567899999999999889999999999999999999999987532110 00
Q ss_pred --------hhcc-----------ccccccc---------cccCCCCchhHHHHHHHHHHHccCCCCCCCChHHHHHHhcc
Q 011092 264 --------RDRN-----------LQMLTDS---------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 315 (494)
Q Consensus 264 --------~~~~-----------~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~L~~ 315 (494)
.... ...+... ......+...+.++.+|+.+||..||.+|||++++++ ++
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~--Hp 329 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN--HP 329 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT--CG
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc--Cc
Confidence 0000 0000000 0011234456789999999999999999999999987 44
Q ss_pred ccc
Q 011092 316 LQK 318 (494)
Q Consensus 316 ~~~ 318 (494)
+.+
T Consensus 330 ~f~ 332 (362)
T d1q8ya_ 330 WLK 332 (362)
T ss_dssp GGT
T ss_pred ccC
Confidence 443
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=6.9e-25 Score=193.87 Aligned_cols=162 Identities=16% Similarity=0.137 Sum_probs=119.5
Q ss_pred ccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCC-----C-------------hHHHHHHHHHHhccCCCCCccEEEEE
Q 011092 64 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-----D-------------PRQFLEEARSVGQLRNNRLTNLLGCC 125 (494)
Q Consensus 64 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~-------------~~~~~~E~~~l~~l~hpnIv~l~~~~ 125 (494)
+-+.||+|+||+||+|...+|+.||||+++..... . ...+.+|...+.++.|++++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 44677999999999999888999999987642211 0 12345688899999999999988764
Q ss_pred ecCCccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccccccccceeecCCCCeEEcccCC
Q 011092 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205 (494)
Q Consensus 126 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 205 (494)
. .+++|||+++..+.+ ++......++.|++.+|.|||++| |+||||||+|||+++++ ++|+|||+
T Consensus 84 ~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG~ 148 (191)
T d1zara2 84 G----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFPQ 148 (191)
T ss_dssp T----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCTT
T ss_pred C----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECCC
Confidence 2 379999998765533 333445678999999999999999 99999999999999655 89999999
Q ss_pred cccCCCCCccccCCCcCC------CcCCCCCCCCCCCCchhHHHHH
Q 011092 206 MKNSRDGKSYSTNLAFTP------PEYLRTGRVTPESVIYSFGTLL 245 (494)
Q Consensus 206 a~~~~~~~~~~~t~~y~a------PE~~~~~~~~~~sDv~slG~vl 245 (494)
|.......... |.. .+.+ ...++.++|+||+.--+
T Consensus 149 a~~~~~~~~~~----~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 149 SVEVGEEGWRE----ILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CEETTSTTHHH----HHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred cccCCCCCcHH----HHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 97654332110 100 0111 24578899999976544
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=4.6e-20 Score=148.59 Aligned_cols=106 Identities=26% Similarity=0.366 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
+..++.+|+.++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.++
T Consensus 3 ~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 81 (117)
T d1elwa_ 3 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 81 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHH
Confidence 556789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhcccccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
..+|++++|+.+|++|++++|++..+.
T Consensus 82 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 82 EFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999987654
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=4.2e-19 Score=151.35 Aligned_cols=109 Identities=24% Similarity=0.311 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
.++.+..+..+|+.+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 4567888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|.++..+|++++|+.+|+++++++|.+..+
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~ 114 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDKDA 114 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999999999999999999988764
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=2.7e-19 Score=158.48 Aligned_cols=106 Identities=23% Similarity=0.362 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
++..+.+.|+.+++.|+|++|+..|++||+++|+ ++.+|+++|.||.++|+|++|+.+|++||+++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3667899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|..+|++++|+.+|++|++++|.+...
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~~~ 108 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQRLN 108 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccHHH
Confidence 999999999999999999999976543
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.76 E-value=3.1e-18 Score=144.76 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=104.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---------------HHHHhHHHHHHHhcCChHHHHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDA 443 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~ 443 (494)
.+++..+..+...|+.+|+.|+|++|+..|++||+..+... ..+|.|+|.||.++|++++|+.+|
T Consensus 11 ~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~ 90 (153)
T d2fbna1 11 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 90 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhh
Confidence 36778899999999999999999999999999998766421 247899999999999999999999
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 444 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 444 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++||+++|+++++|+++|.+|..+|++++|+.+|++|++++|.+.++.
T Consensus 91 ~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 91 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999988754
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=6e-18 Score=145.64 Aligned_cols=114 Identities=14% Similarity=0.121 Sum_probs=104.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc--------------HHHHhHHHHHHHhcCChHHHHHHH
Q 011092 378 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--------------PTVYARRSLCYLMSDMPQDALNDA 443 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~ 443 (494)
..+++..+..+.++|+.+|+.|+|++|+..|++||+..|... ..+|.|+|.||.++|+|++|+.++
T Consensus 6 ~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~ 85 (170)
T d1p5qa1 6 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 85 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchh
Confidence 346677899999999999999999999999999999877631 366889999999999999999999
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 444 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 444 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+.
T Consensus 86 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~ 133 (170)
T d1p5qa1 86 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133 (170)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred hhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999887643
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.73 E-value=1.8e-17 Score=142.42 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--------------cHHHHhHHHHHHHhcCChHHHHHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAM 444 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~ 444 (494)
.+++..+..+.++|+.+|+.|+|.+|+..|++||...+.. ...+|.|+|.||.++|++++|+.+++
T Consensus 9 ~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~ 88 (168)
T d1kt1a1 9 KEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 88 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhh
Confidence 3567889999999999999999999999999999764441 23568899999999999999999999
Q ss_pred HHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 445 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 445 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++|+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+.
T Consensus 89 ~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~ 135 (168)
T d1kt1a1 89 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135 (168)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999987654
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=3.2e-17 Score=133.94 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcch-------H
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 455 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 455 (494)
+.+..+.++|+.++..|+|++|+.+|++||+++|+ +..++.++|.+|..+|+|++|+.+|++||+++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 46788999999999999999999999999999999 999999999999999999999999999999999885 4
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 456 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 456 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+|+++|.++..++++++|+.+|++++.+++..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 77788899999999999999999999887653
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.70 E-value=3.3e-17 Score=140.90 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc----------------CCCCcHHHHhHHHHHHHhcCChHHHHHHH
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA----------------GTMVSPTVYARRSLCYLMSDMPQDALNDA 443 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 443 (494)
..+..+..+...|+.++..|+|++|++.|++||++ +|. ...++.|+|.||.++|+|++|+.+|
T Consensus 22 ~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~ 100 (169)
T d1ihga1 22 KILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSC 100 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhh
Confidence 34455677889999999999999999999999864 455 6678999999999999999999999
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 444 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 444 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+.
T Consensus 101 ~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~ 148 (169)
T d1ihga1 101 LEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 148 (169)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987653
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=2.8e-16 Score=144.42 Aligned_cols=108 Identities=13% Similarity=-0.008 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..++.+|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++
T Consensus 33 ~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 111 (259)
T d1xnfa_ 33 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNR 111 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHH
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
|.+|..+|++++|++.|+++++++|++..
T Consensus 112 g~~~~~~g~~~~A~~~~~~al~~~p~~~~ 140 (259)
T d1xnfa_ 112 GIALYYGGRDKLAQDDLLAFYQDDPNDPF 140 (259)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccHH
Confidence 99999999999999999999999998654
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.66 E-value=2.4e-16 Score=125.35 Aligned_cols=97 Identities=12% Similarity=0.053 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
....++..|..+++.|+|++|+..|+++|+++|+ ++.+|.++|.+|..+|++++|+.++++|++++|+++.+|+.+|.+
T Consensus 15 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~ 93 (112)
T d1hxia_ 15 YHENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 93 (112)
T ss_dssp GCSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHH
Confidence 3445688999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhh
Q 011092 464 LSAMGMENEAQVALKEGT 481 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al 481 (494)
|..+|++++|++.|++.|
T Consensus 94 y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 94 HTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHh
Confidence 999999999999999986
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1.1e-15 Score=134.08 Aligned_cols=103 Identities=14% Similarity=0.075 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.++..++++|..++.+|+|++|++.|+++ .|. ++.+|+|+|.+|..+|++++|+.+|++||+++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 45667889999999999999999999864 455 67889999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
++..+|+|++|+++|++|++..+.+..
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~n~~ 105 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRGNQL 105 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCSE
T ss_pred HHHhhccHHHHHHHHHHHHHhCccCch
Confidence 999999999999999999998776643
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=9.3e-16 Score=123.39 Aligned_cols=102 Identities=10% Similarity=-0.022 Sum_probs=92.7
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcC---ChHHHHHHHHHHHhhCCcc--hHHHHHHHHH
Q 011092 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW--HIASYLQAAA 463 (494)
Q Consensus 389 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 463 (494)
-..++.+...++|++|.+.|.+||.++|+ ++.+++|.|.++.+.+ ++++|+..++++++.+|.. +.+|+++|.+
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~ 81 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 35678889999999999999999999999 9999999999998744 5567999999999999866 5699999999
Q ss_pred HHHCCChHHHHHHHHHhhcccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
|..+|+|++|+++|+++|+++|++..|.
T Consensus 82 y~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 82 NYRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999999999999999999998764
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.59 E-value=2.3e-15 Score=127.23 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----------cHHHHhHHHHHHHhcCChHHHHHHHHHHHhh
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----------SPTVYARRSLCYLMSDMPQDALNDAMQAQII 449 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l 449 (494)
++.++..++..|..++..|+|++|+..|++||+++|+. ...+|+|+|.+|..+|++++|+.+++++|++
T Consensus 5 ~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~ 84 (156)
T d2hr2a1 5 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 84 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhc
Confidence 34556677778999999999999999999999998873 1367999999999999999999999999988
Q ss_pred CCc-----------chHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 450 SPI-----------WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 450 ~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.|. ...+|+++|.+|..+|++++|+.+|++|+++.|+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 85 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred ccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 653 456899999999999999999999999999999876553
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=8.6e-15 Score=128.15 Aligned_cols=104 Identities=16% Similarity=0.105 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc-----------
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----------- 453 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~----------- 453 (494)
+..++++|.+++..|+|++|++.|++||+++|+ ++.+|+++|.+|.++|++++|+.+|++|++..|.+
T Consensus 36 ~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~ 114 (192)
T d1hh8a_ 36 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 114 (192)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhh
Confidence 457899999999999999999999999999999 89999999999999999999999999999876543
Q ss_pred -----hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 454 -----HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 454 -----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
.++++++|.++..+|++++|++.|++|+++.|+...
T Consensus 115 ~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~~ 155 (192)
T d1hh8a_ 115 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 155 (192)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred cccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcch
Confidence 478999999999999999999999999999887543
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=1.7e-15 Score=126.15 Aligned_cols=98 Identities=12% Similarity=0.050 Sum_probs=87.9
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhc----------CChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 393 DVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----------DMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 393 ~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+-+.+.|++|++.|++|++++|+ ++.+++++|.++..+ +.+++|+..|++||+++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 3455678899999999999999999 999999999999854 55688999999999999999999999999
Q ss_pred HHHHCCC-----------hHHHHHHHHHhhcccccccccc
Q 011092 463 ALSAMGM-----------ENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 463 ~~~~~~~-----------~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|..+|+ |++|+++|++|++++|.+..++
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~ 123 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 123 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHH
Confidence 9988764 7999999999999999987654
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=2.4e-14 Score=135.68 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
+..+...|..+...|++++|+..|++++..+|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 567888999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhcccccccccc
Q 011092 465 SAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 465 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
..+|++++|+..|++|++++|++..+.
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~~~~ 277 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSRGPR 277 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC----
T ss_pred HHCCCHHHHHHHHHHHHHhCCcChhhh
Confidence 999999999999999999999987654
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.8e-14 Score=135.12 Aligned_cols=120 Identities=10% Similarity=-0.023 Sum_probs=108.7
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhh
Q 011092 371 NELSFQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII 449 (494)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l 449 (494)
.+.......-......+|+.+|..+...| ++++|+..|+++|+++|+ +..+|+++|.++..+|++++|+.++++||++
T Consensus 63 l~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~ 141 (315)
T d2h6fa1 63 FKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQ 141 (315)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhh
Confidence 34444455556678889999999999876 699999999999999999 9999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 450 SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 450 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|++..+|+++|.++..+|++++|+++|++||++||.+..|+
T Consensus 142 dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~ 183 (315)
T d2h6fa1 142 DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVW 183 (315)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred hhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHH
Confidence 999999999999999999999999999999999999987664
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=2.5e-14 Score=135.55 Aligned_cols=109 Identities=10% Similarity=-0.073 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCC-hHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
..-++++...|..+.+++.+++|++.|++||+++|+ +..+|+++|.++..+|+ +++|+..++++|+++|++..+|+++
T Consensus 40 p~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~ 118 (315)
T d2h6fa1 40 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 118 (315)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 355677788899999999999999999999999999 99999999999999875 9999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
|.++..+|++++|+++|++|++++|++..++
T Consensus 119 ~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~ 149 (315)
T d2h6fa1 119 RVLVEWLRDPSQELEFIADILNQDAKNYHAW 149 (315)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHhhccHHHHHHHHhhhhhhhhcchHHH
Confidence 9999999999999999999999999998764
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=4.6e-13 Score=126.66 Aligned_cols=106 Identities=9% Similarity=0.062 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
+....+++|..+++.|+|++|+..|+++|+.+|+ +..+|.++|.+|..+|++++|+..|++|++++|+++.+|+++|.+
T Consensus 18 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 96 (323)
T d1fcha_ 18 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVS 96 (323)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccc
Confidence 3445678999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhccccccccc
Q 011092 464 LSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 464 ~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
|..+|++++|++.|++++.++|.....
T Consensus 97 ~~~~~~~~~A~~~~~~~~~~~~~~~~~ 123 (323)
T d1fcha_ 97 FTNESLQRQACEILRDWLRYTPAYAHL 123 (323)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTGGG
T ss_pred ccccccccccccchhhHHHhccchHHH
Confidence 999999999999999999999986553
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=3.4e-13 Score=103.12 Aligned_cols=83 Identities=16% Similarity=-0.029 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------cHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
++..++.|..+++.|+|++|+..|++|+++.|.+ ...++.++|.+|.++|++++|+..+++||+++|+++.|++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 5678999999999999999999999999886542 3678999999999999999999999999999999999999
Q ss_pred HHHHHHHHC
Q 011092 459 LQAAALSAM 467 (494)
Q Consensus 459 ~~g~~~~~~ 467 (494)
+++.+...+
T Consensus 85 Nl~~~~~~l 93 (95)
T d1tjca_ 85 NLKYFEYIM 93 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998876554
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=6.9e-13 Score=127.53 Aligned_cols=108 Identities=13% Similarity=0.052 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
..+..+...|..+...|++++|++.|++++...|. ....+..++.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 269 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 347 (388)
T d1w3ba_ 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 463 ALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 463 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+|..+|++++|+.+|++|++++|++..+.
T Consensus 348 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 376 (388)
T d1w3ba_ 348 VLQQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HHHTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999987654
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=1.1e-12 Score=126.22 Aligned_cols=100 Identities=12% Similarity=-0.007 Sum_probs=95.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCC
Q 011092 389 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG 468 (494)
Q Consensus 389 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 468 (494)
+++|..+++.|+|++|++.|+++++.+|+ +..++..+|.+|..+|++++|+..+++|++++|+++.+|+++|.+|..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 46799999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhcccccccc
Q 011092 469 MENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 469 ~~~~A~~~~~~al~l~~~~~~ 489 (494)
++++|+..|..+++.++....
T Consensus 82 ~~~~A~~~~~~~~~~~~~~~~ 102 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDFID 102 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTCHH
T ss_pred ccccccccccccccccccccc
Confidence 999999999999999887654
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=5.6e-12 Score=100.34 Aligned_cols=87 Identities=8% Similarity=-0.083 Sum_probs=80.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHH
Q 011092 378 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 457 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 457 (494)
......++..|..+|.+++..|+|++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.++
T Consensus 30 l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 30 IKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HhcCCcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 3345567889999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 011092 458 YLQAAALS 465 (494)
Q Consensus 458 ~~~g~~~~ 465 (494)
..++.+..
T Consensus 109 ~~l~~l~~ 116 (117)
T d1elwa_ 109 EGLQNMEA 116 (117)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99988754
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.29 E-value=1.1e-11 Score=105.66 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..+.++|.++++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..+
T Consensus 73 ~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l 151 (169)
T d1ihga1 73 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 151 (169)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3456778899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHH
Q 011092 461 AAALSAMGMENEAQ 474 (494)
Q Consensus 461 g~~~~~~~~~~~A~ 474 (494)
+.+...+..+.++.
T Consensus 152 ~~~~~~l~~~~~~~ 165 (169)
T d1ihga1 152 LKVKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99988887776654
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.25 E-value=5.9e-11 Score=101.67 Aligned_cols=105 Identities=8% Similarity=-0.028 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------------------cHHHHhHHHHHHHhcCChHHHH
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---------------------SPTVYARRSLCYLMSDMPQDAL 440 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---------------------~~~~~~~~~~~~~~~~~~~~A~ 440 (494)
....+.+...|..+...|++++|+..|.+|+++.+.+ ...++.+++.++..+|++++|+
T Consensus 8 ~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 8 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 4556788999999999999999999999999998752 1156889999999999999999
Q ss_pred HHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHh-------hccccc
Q 011092 441 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG-------TTLEAK 486 (494)
Q Consensus 441 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a-------l~l~~~ 486 (494)
.+++++++++|.+..+|.+++.+|..+|++++|++.|+++ +.++|.
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 9999999999999999999999999999999999999998 556664
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=5.3e-12 Score=115.16 Aligned_cols=94 Identities=17% Similarity=0.080 Sum_probs=84.4
Q ss_pred hcCHHHHHHHHHHHHhcCCC---CcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHH
Q 011092 398 QKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 474 (494)
Q Consensus 398 ~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~ 474 (494)
..+++.|+..+++++...+. ..+.+|+++|.+|..+|++++|+..|++||+++|+++.+|+++|.+|..+|++++|+
T Consensus 12 ~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~ 91 (259)
T d1xnfa_ 12 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 91 (259)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhh
Confidence 45678889999999875332 256789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccc
Q 011092 475 VALKEGTTLEAKKNSTA 491 (494)
Q Consensus 475 ~~~~~al~l~~~~~~a~ 491 (494)
.+|++|++++|++..+.
T Consensus 92 ~~~~~al~~~p~~~~a~ 108 (259)
T d1xnfa_ 92 EAFDSVLELDPTYNYAH 108 (259)
T ss_dssp HHHHHHHHHCTTCTHHH
T ss_pred hhhhHHHHHHhhhhhhH
Confidence 99999999999987654
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=2.2e-11 Score=103.81 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
...+.++|.++++.|+|++|+..+++||+++|+ +..+++++|.+|..+|++++|+.+|++|++++|+++.+...++.++
T Consensus 62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 140 (170)
T d1p5qa1 62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 140 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 346778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHH
Q 011092 465 SAMGMENEAQV 475 (494)
Q Consensus 465 ~~~~~~~~A~~ 475 (494)
..++++.+..+
T Consensus 141 ~~~~~~~~~e~ 151 (170)
T d1p5qa1 141 QRIRRQLAREK 151 (170)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776543
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.23 E-value=3.2e-11 Score=102.57 Aligned_cols=95 Identities=13% Similarity=0.080 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 463 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 463 (494)
.+..+.++|.++++.|+|++|+..|+++|+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+
T Consensus 63 ~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 141 (168)
T d1kt1a1 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMC 141 (168)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHH-HHHHHHH
Q 011092 464 LSAMGMENE-AQVALKE 479 (494)
Q Consensus 464 ~~~~~~~~~-A~~~~~~ 479 (494)
...++++.+ ..+.|.+
T Consensus 142 ~~~~~~~~e~~kk~~~~ 158 (168)
T d1kt1a1 142 QKKAKEHNERDRRTYAN 158 (168)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHH
Confidence 988877654 3444333
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=3.8e-11 Score=101.04 Aligned_cols=98 Identities=13% Similarity=-0.028 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHH
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 458 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 458 (494)
.-...++..|..+|..++..|++++|+..|++||+++|+ +..+|.++|.+|..+|++++|+.+++++++++|+++.++.
T Consensus 38 ~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~ 116 (159)
T d1a17a_ 38 ELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 116 (159)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred ccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 344567889999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHH--HCCChHHHHHHH
Q 011092 459 LQAAALS--AMGMENEAQVAL 477 (494)
Q Consensus 459 ~~g~~~~--~~~~~~~A~~~~ 477 (494)
.++.+.. ..+.+++|+...
T Consensus 117 ~l~~~~~~~~~~~~~~a~~~~ 137 (159)
T d1a17a_ 117 KYQECNKIVKQKAFERAIAGD 137 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCc
Confidence 8887754 445566776543
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.18 E-value=3.6e-11 Score=100.50 Aligned_cols=83 Identities=8% Similarity=0.048 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
...+.++|..+++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999 8999999999999999999999999999999999999999999887
Q ss_pred HHCC
Q 011092 465 SAMG 468 (494)
Q Consensus 465 ~~~~ 468 (494)
.+++
T Consensus 146 ~kl~ 149 (153)
T d2fbna1 146 NKLK 149 (153)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.08 E-value=1.3e-10 Score=91.31 Aligned_cols=70 Identities=14% Similarity=-0.028 Sum_probs=66.2
Q ss_pred HHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 422 VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 422 ~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.+++.|.++.+.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|.+..+.
T Consensus 18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 87 (112)
T d1hxia_ 18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 87 (112)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccch
Confidence 3567899999999999999999999999999999999999999999999999999999999999987654
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=1.2e-10 Score=93.95 Aligned_cols=72 Identities=13% Similarity=-0.051 Sum_probs=67.3
Q ss_pred HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
+..+.+.|..|+..|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|++..++
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 455778999999999999999999999999999999999999999999999999999999999999987643
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=1.3e-10 Score=88.28 Aligned_cols=72 Identities=10% Similarity=-0.190 Sum_probs=65.2
Q ss_pred HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc-------hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 420 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
++-.+++|.++...|+|++|+..|++|+++.|.+ +.+++++|.++.++|++++|++.|++||+++|++..+.
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 3446788999999999999999999999987654 68999999999999999999999999999999998764
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.06 E-value=9e-11 Score=96.94 Aligned_cols=95 Identities=14% Similarity=-0.015 Sum_probs=82.1
Q ss_pred hhhHHHHHHHHHHHHHHHHH----------hcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCC-----------h
Q 011092 378 WTDQMQETLNSKKKGDVAFR----------QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-----------P 436 (494)
Q Consensus 378 ~~~~~~~~~~~~~~g~~~~~----------~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-----------~ 436 (494)
....+.++..++..|.+++. .+.+++|+..|++||+++|+ ++.+|+++|.+|..+|+ |
T Consensus 24 l~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~ 102 (145)
T d1zu2a1 24 YKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNF 102 (145)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhH
Confidence 34456788999999999984 45668999999999999999 99999999999988764 7
Q ss_pred HHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHH
Q 011092 437 QDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 473 (494)
Q Consensus 437 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 473 (494)
++|+..|++||+++|++..++..++.+....+.+.++
T Consensus 103 ~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 103 DLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred HHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999987666666665
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.05 E-value=6.1e-11 Score=103.52 Aligned_cols=96 Identities=7% Similarity=-0.013 Sum_probs=79.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHH
Q 011092 377 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 456 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a 456 (494)
.......++..|.++|.+|.+.|+|++|+.+|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++...
T Consensus 30 al~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~-~~~a~~~lg~~~~~l~~~~~A~~~~~~al~l~p~~~~~ 108 (201)
T d2c2la1 30 AITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108 (201)
T ss_dssp HHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHH
Confidence 34444567889999999999999999999999999999999 89999999999999999999999999999999977655
Q ss_pred HHHHHHHHHHCCChHHH
Q 011092 457 SYLQAAALSAMGMENEA 473 (494)
Q Consensus 457 ~~~~g~~~~~~~~~~~A 473 (494)
+...+..+...++...+
T Consensus 109 ~~~~~~~~l~~~~~~~~ 125 (201)
T d2c2la1 109 FGDDIPSALRIAKKKRW 125 (201)
T ss_dssp CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHH
Confidence 54444444444433333
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=2e-10 Score=91.53 Aligned_cols=88 Identities=13% Similarity=0.004 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHhcCCCCc-HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchH
Q 011092 380 DQMQETLNSKKKGDVAFR---QKDLKDAIECYTQFIDAGTMVS-PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 455 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~---~~~~~~A~~~~~~ai~~~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 455 (494)
....++..+++.|..+.+ .+++++|+..|++++..+|... ..+++++|.+|..+|++++|+.+|+++|+++|++.+
T Consensus 28 ~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~ 107 (122)
T d1nzna_ 28 AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQ 107 (122)
T ss_dssp HSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHH
Confidence 344667899999999986 4567789999999999998722 458999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHC
Q 011092 456 ASYLQAAALSAM 467 (494)
Q Consensus 456 a~~~~g~~~~~~ 467 (494)
|...++.+..++
T Consensus 108 A~~l~~~I~~~~ 119 (122)
T d1nzna_ 108 AKELERLIDKAM 119 (122)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999877654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=1.9e-10 Score=115.44 Aligned_cols=108 Identities=8% Similarity=-0.065 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 460 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 460 (494)
....+..+...|..+.+.|++++|+..|.+++..+|. .++.++|.++...|++++|+..|++|++++|+++.+|+++
T Consensus 116 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~L 192 (497)
T d1ya0a1 116 DLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQL 192 (497)
T ss_dssp ---------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHH
T ss_pred ChhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 3466778889999999999999999999999988765 5778889999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 461 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 461 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
|.++...|++.+|+.+|.+|+.++|....|.
T Consensus 193 g~~~~~~~~~~~A~~~y~ral~~~~~~~~a~ 223 (497)
T d1ya0a1 193 AILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhCCCCCHHHH
Confidence 9999999999999999999999998876654
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.91 E-value=1.3e-09 Score=101.16 Aligned_cols=106 Identities=11% Similarity=0.027 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----CCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc----
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-----TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 453 (494)
..+..|.+.|+.+...|+|++|+++|.+|+++. +......|.+.|.||..+|++++|+..+++++++.+..
T Consensus 35 ~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~ 114 (290)
T d1qqea_ 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccch
Confidence 446778899999999999999999999999873 22145789999999999999999999999999997766
Q ss_pred --hHHHHHHHHHHHH-CCChHHHHHHHHHhhccccccc
Q 011092 454 --HIASYLQAAALSA-MGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 454 --~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~~~~~ 488 (494)
..++.++|.+|.. +|++++|+..|++|+++.+...
T Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~ 152 (290)
T d1qqea_ 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ 152 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6789999998865 7999999999999999877653
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.89 E-value=2.8e-09 Score=100.83 Aligned_cols=94 Identities=11% Similarity=-0.102 Sum_probs=44.0
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCC--hHHHHHHHHHHHhhCCcchHHH-HHHHHHHHHCCChH
Q 011092 395 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQIISPIWHIAS-YLQAAALSAMGMEN 471 (494)
Q Consensus 395 ~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~l~p~~~~a~-~~~g~~~~~~~~~~ 471 (494)
+...|++++|+.+|+++++.+|+ +..+|++++.++..+++ +++|+..++++++++|.+..++ +.+|.++...++++
T Consensus 83 ~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
T d1dcea1 83 EESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPA 161 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHHHHhccccH
Confidence 33334444455555555555554 44444444444444433 3444445555555554444443 23344444444455
Q ss_pred HHHHHHHHhhcccccccc
Q 011092 472 EAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 472 ~A~~~~~~al~l~~~~~~ 489 (494)
+|+..++++++++|.+..
T Consensus 162 ~Al~~~~~~i~~~p~~~~ 179 (334)
T d1dcea1 162 EELAFTDSLITRNFSNYS 179 (334)
T ss_dssp HHHHHHHTTTTTTCCCHH
T ss_pred HHHHHHHHHHHcCCCCHH
Confidence 555555555555444443
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.78 E-value=1.2e-08 Score=94.38 Aligned_cols=108 Identities=8% Similarity=-0.196 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhHHHHHHHh-cCChHHHHHHHHHHHhhCCc---
Q 011092 382 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLM-SDMPQDALNDAMQAQIISPI--- 452 (494)
Q Consensus 382 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~l~p~--- 452 (494)
...+..|.+.|..|.+.|++++|++.|++|+++.+.. ...++.+++.+|.. +|++++|+..+++|+++.+.
T Consensus 74 ~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~ 153 (290)
T d1qqea_ 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3457889999999999999999999999999886552 15678888877754 69999999999999988543
Q ss_pred ---chHHHHHHHHHHHHCCChHHHHHHHHHhhcccccccc
Q 011092 453 ---WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 453 ---~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
...++.++|.++..+|+|++|+..|++++++.+....
T Consensus 154 ~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~ 193 (290)
T d1qqea_ 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred hhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchh
Confidence 3667999999999999999999999999999887653
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.78 E-value=1.8e-08 Score=95.03 Aligned_cols=94 Identities=10% Similarity=-0.060 Sum_probs=82.7
Q ss_pred HHhcC-HHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCC----------hHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 396 FRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM----------PQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 396 ~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
...+. +++|++.|+++|+++|+ +..+|+.++.++..++. +++|+..++++++.+|+++.+|+.+|.++
T Consensus 39 ~~~~~~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~ 117 (334)
T d1dcea1 39 RQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 117 (334)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHH
Confidence 34444 58999999999999999 89999888877665544 78999999999999999999999999999
Q ss_pred HHCCC--hHHHHHHHHHhhccccccccc
Q 011092 465 SAMGM--ENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 465 ~~~~~--~~~A~~~~~~al~l~~~~~~a 490 (494)
..+++ +++|+..++++++++|++..+
T Consensus 118 ~~~~~~~~~~a~~~~~~al~~~~~~~~~ 145 (334)
T d1dcea1 118 SRLPEPNWARELELCARFLEADERNFHC 145 (334)
T ss_dssp HTCSSCCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHhccccHHHHHHHHHHHHhhCchhhhh
Confidence 88875 899999999999999988654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.74 E-value=1.9e-08 Score=91.16 Aligned_cols=98 Identities=13% Similarity=0.016 Sum_probs=75.8
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHH---------------
Q 011092 392 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA--------------- 456 (494)
Q Consensus 392 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a--------------- 456 (494)
+..+++.|++++|+..|+++|+.+|+ +..++.+++.+|...|++++|+..++++++++|++..+
T Consensus 3 ~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~~ 81 (264)
T d1zbpa1 3 WKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 81 (264)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccH
Confidence 45667788888888888888888888 88888888888888888888888888888887776544
Q ss_pred --------------------HHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 457 --------------------SYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 457 --------------------~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
+...+.++...|++++|...++++.++.|.....
T Consensus 82 ~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~ 135 (264)
T d1zbpa1 82 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFL 135 (264)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEE
T ss_pred HHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcc
Confidence 4445556666677888888888888888776543
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=7.4e-08 Score=90.21 Aligned_cols=110 Identities=10% Similarity=-0.039 Sum_probs=94.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc----HHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcc-
Q 011092 379 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW- 453 (494)
Q Consensus 379 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~- 453 (494)
.+....++...-+|..++..|++++|+..|++|++..|++. ..++.++|.+|..+|++++|+..+++++++.|..
T Consensus 6 ~~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~ 85 (366)
T d1hz4a_ 6 REDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD 85 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Confidence 34445567777789999999999999999999999999843 3578889999999999999999999999886543
Q ss_pred -----hHHHHHHHHHHHHCCChHHHHHHHHHhhccccccc
Q 011092 454 -----HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 454 -----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
..+++++|.++...|++..|...+.+++++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~ 125 (366)
T d1hz4a_ 86 VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQH 125 (366)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcc
Confidence 56789999999999999999999999998876543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.65 E-value=9e-08 Score=86.83 Aligned_cols=147 Identities=12% Similarity=0.049 Sum_probs=96.8
Q ss_pred HHHHHhcCCccccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEecCC
Q 011092 51 QLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGD 129 (494)
Q Consensus 51 ~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 129 (494)
++.....++. ++...+.++.+.||+... ++..++||+...........+.+|...+..+. +--+.+++.++..++
T Consensus 8 ~l~~~~~~~~---~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~ 83 (263)
T d1j7la_ 8 ELKKLIEKYR---CVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHHTTSE---EEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhhhceE---EEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCC
Confidence 4555555443 343334455578998865 45677889886554444556788999988873 444788888888888
Q ss_pred ccceeeecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh---------------------------------
Q 011092 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--------------------------------- 176 (494)
Q Consensus 130 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--------------------------------- 176 (494)
..++||++++|.++.+.... ... ...++.++...+..||+
T Consensus 84 ~~~lv~~~l~G~~~~~~~~~----~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T d1j7la_ 84 WSNLLMSEADGVLCSEEYED----EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEEECCSSEEHHHHTTT----CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred ceEEEEEecccccccccccc----ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence 89999999999888654421 011 11223333333333332
Q ss_pred --------------------cC-----CcccccccccceeecCCCCeEEcccCCccc
Q 011092 177 --------------------KG-----RALYHDLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 177 --------------------~~-----~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
.. .++|+|+.|.|||+++++.+-|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 10 168999999999999877677999997653
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=7.2e-08 Score=96.17 Aligned_cols=85 Identities=13% Similarity=-0.037 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHH
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 462 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 462 (494)
.....+..+|..+..+|+|++|+.+|.+|++++|+ +...|+++|.+|...|++.+|+.+|.+||.++|.++.|+.+++.
T Consensus 150 ~~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~ 228 (497)
T d1ya0a1 150 ICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQK 228 (497)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 34567899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCC
Q 011092 463 ALSAMG 468 (494)
Q Consensus 463 ~~~~~~ 468 (494)
++....
T Consensus 229 ~~~~~~ 234 (497)
T d1ya0a1 229 ALSKAL 234 (497)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 887544
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=2e-07 Score=87.13 Aligned_cols=105 Identities=10% Similarity=-0.074 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhHHHHHHHhcCChHHHHHHHHHHHh------hCCcc
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQI------ISPIW 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~------l~p~~ 453 (494)
..+..+...|..+...|++++|...|.++++..+.+. ...+.++|.+|..+|++++|+..+++++. ..|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 290 (366)
T d1hz4a_ 211 WISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDL 290 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHH
Confidence 4456778889999999999999999999999887632 35677889999999999999999999984 45777
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHhhcccccc
Q 011092 454 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 454 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 487 (494)
+.+++.+|.+|..+|++++|++.|++|+++.+..
T Consensus 291 ~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~ 324 (366)
T d1hz4a_ 291 NRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324 (366)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhhc
Confidence 8999999999999999999999999999987654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.40 E-value=2.6e-07 Score=76.60 Aligned_cols=69 Identities=16% Similarity=0.077 Sum_probs=59.5
Q ss_pred HHHhHH--HHHHHhcCChHHHHHHHHHHHhhCCcc------------hHHHHHHHHHHHHCCChHHHHHHHHHhhccccc
Q 011092 421 TVYARR--SLCYLMSDMPQDALNDAMQAQIISPIW------------HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 486 (494)
Q Consensus 421 ~~~~~~--~~~~~~~~~~~~A~~~~~~al~l~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 486 (494)
.+|.++ |..+...|+|++|+..|++||+++|+. +.+|.++|.+|..+|+|++|+.++++|+++.++
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~ 87 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 87 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccc
Confidence 344444 678888899999999999999999875 468999999999999999999999999999886
Q ss_pred ccc
Q 011092 487 KNS 489 (494)
Q Consensus 487 ~~~ 489 (494)
...
T Consensus 88 ~~~ 90 (156)
T d2hr2a1 88 RGE 90 (156)
T ss_dssp HCC
T ss_pred ccc
Confidence 543
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.32 E-value=1.2e-06 Score=67.75 Aligned_cols=79 Identities=5% Similarity=-0.165 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHh---cCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 461 (494)
Q Consensus 385 ~~~~~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 461 (494)
...-++-|..+.+. .+.++||..+++++..+|.+..++++++|.+|.++|+|++|...++++|+++|++.+|...+-
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~ 114 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 114 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHH
Confidence 34555556555533 344566666666666666523356666666666666666666666666666666666655544
Q ss_pred HH
Q 011092 462 AA 463 (494)
Q Consensus 462 ~~ 463 (494)
.+
T Consensus 115 ~I 116 (124)
T d2pqrb1 115 MV 116 (124)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.29 E-value=1.4e-06 Score=67.41 Aligned_cols=73 Identities=7% Similarity=-0.085 Sum_probs=64.2
Q ss_pred cHHHHhHHHHHHHhc---CChHHHHHHHHHHHhhCCcch-HHHHHHHHHHHHCCChHHHHHHHHHhhcccccccccc
Q 011092 419 SPTVYARRSLCYLMS---DMPQDALNDAMQAQIISPIWH-IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 491 (494)
Q Consensus 419 ~~~~~~~~~~~~~~~---~~~~~A~~~~~~al~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 491 (494)
.....++.|.++.+. .+.++||..++++++.+|... +++|++|++|+++|+|++|+++++++|+++|++..|.
T Consensus 34 s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~ 110 (124)
T d2pqrb1 34 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110 (124)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHH
Confidence 456778888888865 445789999999999999774 8999999999999999999999999999999998764
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.27 E-value=3.4e-06 Score=77.99 Aligned_cols=101 Identities=13% Similarity=-0.033 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHH-HhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Q 011092 387 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 465 (494)
Q Consensus 387 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 465 (494)
.|...+....+.|++++|.+.|.+|++..|. ....|...+... ...|+.+.|...|+++++.+|+++..|...+..+.
T Consensus 136 ~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~ 214 (308)
T d2onda1 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 4667778888889999999999999999998 777777777654 44688999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHhhccccccc
Q 011092 466 AMGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 466 ~~~~~~~A~~~~~~al~l~~~~~ 488 (494)
..|+++.|...|++|++..|.+.
T Consensus 215 ~~g~~~~aR~~fe~ai~~~~~~~ 237 (308)
T d2onda1 215 HLNEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCG
T ss_pred HcCChHHHHHHHHHHHHhCCCCh
Confidence 99999999999999998766543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.21 E-value=2.3e-06 Score=76.83 Aligned_cols=133 Identities=15% Similarity=0.119 Sum_probs=83.5
Q ss_pred CCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC--CCCCccEEEEEecCCccceeeecCCCCCHHHHhc--
Q 011092 73 PNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-- 148 (494)
Q Consensus 73 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~-- 148 (494)
.+.||+...+++..+++|...... ...+..|+..++.+. .-.+.+++.++.+++..++||++++|.++.+...
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~~~~~~ 100 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAP 100 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTTSCCCH
T ss_pred CCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccccccccH
Confidence 367999988788889999876543 234677888888773 3346778888888888999999999866533110
Q ss_pred ------------c--c---CCCCCC--HHHHHHHH--------------------HHHHHHHHHHHhcC------Ccccc
Q 011092 149 ------------H--W---ETHPMK--WAMRLRVV--------------------LHLAQALEYCTSKG------RALYH 183 (494)
Q Consensus 149 ------------~--~---~~~~l~--~~~~~~i~--------------------~~i~~~l~~lH~~~------~ivH~ 183 (494)
. . ...++. ......-. ......+..+.... .++|+
T Consensus 101 ~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~liHg 180 (255)
T d1nd4a_ 101 AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHG 180 (255)
T ss_dssp HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECS
T ss_pred HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCceEEeC
Confidence 0 0 000010 10000000 01112233333321 17999
Q ss_pred cccccceeecCCCCeEEcccCCccc
Q 011092 184 DLNAYRILFDEDGNPRLSTFGLMKN 208 (494)
Q Consensus 184 Dlkp~Nill~~~~~~kl~Dfgla~~ 208 (494)
|+.|.|||++++..+-|+||+.+..
T Consensus 181 D~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 181 DACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp SCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCCCcceEEeCCceEEEEEchhccc
Confidence 9999999999877678999997643
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.10 E-value=1.7e-05 Score=71.25 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcchHHHHH
Q 011092 384 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYL 459 (494)
Q Consensus 384 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~ 459 (494)
++.+++.+|..+++++||++|++.|++|.+.+ +..+++++|.+|.. ..++..|+..++++... .++.+.+.
T Consensus 1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~~~~a~~~ 75 (265)
T d1ouva_ 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--NYSNGCHL 75 (265)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--cccchhhc
Confidence 36789999999999999999999999998764 56889999999987 67899999999998765 48899999
Q ss_pred HHHHHHH----CCChHHHHHHHHHhhcccccc
Q 011092 460 QAAALSA----MGMENEAQVALKEGTTLEAKK 487 (494)
Q Consensus 460 ~g~~~~~----~~~~~~A~~~~~~al~l~~~~ 487 (494)
+|.++.. ..+.+.|...|+++.+..+..
T Consensus 76 l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~ 107 (265)
T d1ouva_ 76 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAE 107 (265)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred cccccccccccchhhHHHHHHHhhhhhhhhhh
Confidence 9998875 568899999999998775543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.09 E-value=1.1e-05 Score=74.48 Aligned_cols=105 Identities=10% Similarity=-0.076 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 011092 385 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 464 (494)
Q Consensus 385 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 464 (494)
...|...+..+...|++++|...|+++|+..|.+...+|...+......|+++.|.+.|++|++..|.....|...|...
T Consensus 99 ~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e 178 (308)
T d2onda1 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 34567778888899999999999999999999844567888888889999999999999999999999999999999875
Q ss_pred H-HCCChHHHHHHHHHhhcccccccc
Q 011092 465 S-AMGMENEAQVALKEGTTLEAKKNS 489 (494)
Q Consensus 465 ~-~~~~~~~A~~~~~~al~l~~~~~~ 489 (494)
. ..|+.+.|...|+++++.+|.+..
T Consensus 179 ~~~~~~~~~a~~i~e~~l~~~p~~~~ 204 (308)
T d2onda1 179 YYCSKDKSVAFKIFELGLKKYGDIPE 204 (308)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHTTCHH
T ss_pred HHhccCHHHHHHHHHHHHHhhhhhHH
Confidence 4 568999999999999999888754
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.04 E-value=2.6e-06 Score=76.72 Aligned_cols=62 Identities=19% Similarity=-0.022 Sum_probs=57.9
Q ss_pred HHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHHCCChHHHHHHHHHhhccccccccc
Q 011092 429 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 490 (494)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 490 (494)
-.+..|++++|+..++++++.+|+++.++..+|.+|...|++++|++.|+++++++|+...+
T Consensus 5 ~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~ 66 (264)
T d1zbpa1 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 66 (264)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHH
Confidence 34567999999999999999999999999999999999999999999999999999987653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.96 E-value=1.4e-05 Score=76.44 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=50.6
Q ss_pred cccCCCCCCCeEEEEEEc-CCCEEEEEEecC------CCC-CChHHHHHHHHHHhcc-CC--CCCccEEEEEecCCccce
Q 011092 65 VSEHGEKAPNVVYKGKLE-NQRRIAVKRFNR------MAW-PDPRQFLEEARSVGQL-RN--NRLTNLLGCCCEGDERLL 133 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~------~~~-~~~~~~~~E~~~l~~l-~h--pnIv~l~~~~~~~~~~~l 133 (494)
+..+|.|....||+.... +++.|+||.-.. ..+ ....+...|...|..+ .+ ..+++++.+. ++..++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence 457899999999999854 477899997532 111 2344566788888777 33 3466677654 445689
Q ss_pred eeecCCCCC
Q 011092 134 VAEYMPNET 142 (494)
Q Consensus 134 v~e~~~~gs 142 (494)
|||++++..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999998654
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.93 E-value=1.8e-05 Score=66.61 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHH-------HhhCCcc
Q 011092 383 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA-------QIISPIW 453 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------l~l~p~~ 453 (494)
.....+..+|..+...|+|++|+..++++++++|. +..+|.+++.+|..+|++.+|+..|+++ +.++|..
T Consensus 65 ~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 65 DKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 34567889999999999999999999999999999 8999999999999999999999999998 4466753
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.74 E-value=0.00014 Score=57.56 Aligned_cols=85 Identities=11% Similarity=-0.040 Sum_probs=73.0
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH----CC
Q 011092 397 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MG 468 (494)
Q Consensus 397 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~ 468 (494)
...++++|++.|++|.+.+ ++.+.+++|..|.. ..++++|+..|++|.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~g---~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhccc---chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 4578999999999998864 67888889998876 46789999999999886 588999999999987 56
Q ss_pred ChHHHHHHHHHhhccccc
Q 011092 469 MENEAQVALKEGTTLEAK 486 (494)
Q Consensus 469 ~~~~A~~~~~~al~l~~~ 486 (494)
++++|+.+|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 899999999999987654
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.62 E-value=0.00019 Score=64.01 Aligned_cols=101 Identities=20% Similarity=0.110 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHh----cCChHHHHHHHHHHHhhCCcch
Q 011092 383 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 454 (494)
Q Consensus 383 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~ 454 (494)
.+...+...|..+.. ..+...+...++++.+. . +..+.+++|.+|.. ..++++|+..|++|.+. .++
T Consensus 140 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~ 214 (265)
T d1ouva_ 140 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENG 214 (265)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred cccchhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCH
Confidence 345567778888875 57788999999999865 3 67888999999887 67899999999999988 479
Q ss_pred HHHHHHHHHHHH----CCChHHHHHHHHHhhccccccc
Q 011092 455 IASYLQAAALSA----MGMENEAQVALKEGTTLEAKKN 488 (494)
Q Consensus 455 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~ 488 (494)
.|++++|.+|.. ..++++|+++|++|.++..+.+
T Consensus 215 ~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~A 252 (265)
T d1ouva_ 215 GGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 252 (265)
T ss_dssp HHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHHH
Confidence 999999999986 4589999999999998876554
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=6.7e-05 Score=69.58 Aligned_cols=96 Identities=21% Similarity=0.232 Sum_probs=59.6
Q ss_pred ccccCHHHHHHHhcCCc--cccccccCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccCCCCCc--
Q 011092 44 FREFTLEQLKNATSGFA--VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLT-- 119 (494)
Q Consensus 44 ~~~~~~~~~~~~~~~~~--~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv-- 119 (494)
+..++.+.|..+..++. ....+-.|+ +.-..||+....+|..|++|+.+.... +.+++..|...+..|...+|.
T Consensus 5 f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv~ 82 (325)
T d1zyla1 5 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVA 82 (325)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBC
T ss_pred ccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCCC
Confidence 45677777766664432 211111222 334689999998999999999876543 467788899888888432221
Q ss_pred cEE-----EEEecCCccceeeecCCCC
Q 011092 120 NLL-----GCCCEGDERLLVAEYMPNE 141 (494)
Q Consensus 120 ~l~-----~~~~~~~~~~lv~e~~~~g 141 (494)
... ..+..++..+.++++++|.
T Consensus 83 ~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 83 APVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred CceecCCCeeeeeeeEEEEEEeecCCc
Confidence 111 1122345578889998764
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.26 E-value=0.00051 Score=54.15 Aligned_cols=81 Identities=15% Similarity=-0.008 Sum_probs=65.6
Q ss_pred hcCHHHHHHHHHHHHhcCCCCcHHHHhHHHHHHHhcCChHHHHHHHHHHHhhCCcchHHHHHHHHHHHH----CCChHHH
Q 011092 398 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 473 (494)
Q Consensus 398 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 473 (494)
..|+++|++.|.+|.+.... .+.++++ .....++++|+..+++|.+. +++.+.+++|.+|.. ..++++|
T Consensus 6 ~kd~~~A~~~~~kaa~~g~~---~a~~~l~--~~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELNEM---FGCLSLV--SNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHTTCT---THHHHHH--TCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCh---hhhhhhc--cccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHH
Confidence 35899999999999988643 3444444 34557899999999999876 689999999999986 5679999
Q ss_pred HHHHHHhhcccc
Q 011092 474 QVALKEGTTLEA 485 (494)
Q Consensus 474 ~~~~~~al~l~~ 485 (494)
++.|++|.+...
T Consensus 79 ~~~~~~aa~~g~ 90 (133)
T d1klxa_ 79 AQYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHhhhhccCc
Confidence 999999987643
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.04 E-value=0.00069 Score=64.33 Aligned_cols=73 Identities=15% Similarity=0.260 Sum_probs=50.6
Q ss_pred cccCCCCCCCeEEEEEEcCC--------CEEEEEEecCCCCCChHHHHHHHHHHhccC-CCCCccEEEEEecCCccceee
Q 011092 65 VSEHGEKAPNVVYKGKLENQ--------RRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 135 (494)
Q Consensus 65 i~~lG~G~~g~Vy~~~~~~~--------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~ 135 (494)
+..++.|-...+|+....++ ..|.+++... . ...-...+|..+++.+. +.-.+++++++.. .+||
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-P-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 46777888999999986542 4577766542 2 23334568999999884 4445678888754 6899
Q ss_pred ecCCCCCH
Q 011092 136 EYMPNETL 143 (494)
Q Consensus 136 e~~~~gsL 143 (494)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.95 E-value=0.00081 Score=61.61 Aligned_cols=66 Identities=12% Similarity=0.165 Sum_probs=43.1
Q ss_pred ccCHHHHHHHhcCCccccccc--cCCCCCCCeEEEEEEcCCCEEEEEEecCCCCCChHHHHHHHHHHhccC
Q 011092 46 EFTLEQLKNATSGFAVENIVS--EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR 114 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~i~--~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 114 (494)
.++.+++.....+|...++.+ .|..|--.+.|+....+| .+++|+..... +......|+.++..|.
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~ 69 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLA 69 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhh
Confidence 467788999998887655543 345676788999988666 58899886532 3345566777777774
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.62 E-value=0.29 Score=34.83 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA 414 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~ 414 (494)
.+..+..+..+|..+-..|+|++|+.+|.+||+.
T Consensus 11 ~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4567888899999999999999999999999753
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.98 E-value=0.47 Score=32.13 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011092 381 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFI 412 (494)
Q Consensus 381 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai 412 (494)
++.-|-.+-.++..+.+.|.|++||+++.+|.
T Consensus 4 PLN~AH~~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 4 PLNLAHQQSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44566677788999999999999999988775
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.13 E-value=0.32 Score=33.23 Aligned_cols=35 Identities=11% Similarity=0.275 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011092 380 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA 414 (494)
Q Consensus 380 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~ 414 (494)
..+..+..+..+|..+=+.|+|++|+.+|.+|++.
T Consensus 6 ~~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~~ 40 (77)
T d1wr0a1 6 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 40 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34567888888999988999999999998888753
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.48 E-value=0.73 Score=31.14 Aligned_cols=23 Identities=26% Similarity=0.176 Sum_probs=11.5
Q ss_pred HHHHHHHHHCCChHHHHHHHHHh
Q 011092 458 YLQAAALSAMGMENEAQVALKEG 480 (494)
Q Consensus 458 ~~~g~~~~~~~~~~~A~~~~~~a 480 (494)
-+++..+...|+|++|++++++|
T Consensus 12 ~RrAer~l~~~rydeAIech~kA 34 (83)
T d2crba1 12 SRRADRLLAAGKYEEAISCHRKA 34 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 34455555555555555554444
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