Query         011093
Match_columns 494
No_of_seqs    177 out of 1969
Neff          11.4
Searched_HMMs 46136
Date          Fri Mar 29 08:02:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011093.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011093hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.5E-87 3.1E-92  630.4  47.4  456   27-492    23-485 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 1.8E-80 3.9E-85  605.0  48.9  473   18-493    16-497 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 4.5E-81 9.8E-86  576.7  42.1  468   11-493    12-497 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 4.4E-80 9.5E-85  604.2  49.0  464   26-492    53-533 (543)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 6.3E-80 1.4E-84  601.5  48.6  465   27-493    31-507 (517)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 3.9E-79 8.5E-84  592.0  49.1  466   23-493    24-495 (504)
  7 PLN03112 cytochrome P450 famil 100.0 1.4E-78 3.1E-83  593.3  50.1  488    4-491     6-504 (514)
  8 PLN02183 ferulate 5-hydroxylas 100.0 1.2E-78 2.5E-83  592.4  47.7  459   26-492    32-509 (516)
  9 PLN02966 cytochrome P450 83A1  100.0   1E-78 2.2E-83  591.5  47.0  471   21-494    20-499 (502)
 10 PLN02394 trans-cinnamate 4-mon 100.0 2.4E-77 5.3E-82  583.6  48.9  466   25-493    25-502 (503)
 11 PTZ00404 cytochrome P450; Prov 100.0   3E-77 6.6E-82  579.8  46.8  455   21-491    20-479 (482)
 12 PLN00168 Cytochrome P450; Prov 100.0 7.3E-76 1.6E-80  573.2  48.2  460   26-492    31-516 (519)
 13 PLN02655 ent-kaurene oxidase   100.0 1.8E-75   4E-80  563.2  43.7  450   32-491     1-460 (466)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 1.9E-75 4.2E-80  561.0  38.8  451   28-493    33-494 (497)
 15 PLN03018 homomethionine N-hydr 100.0 1.2E-73 2.5E-78  554.3  50.1  465   26-492    36-523 (534)
 16 PLN02290 cytokinin trans-hydro 100.0 1.8E-74 3.9E-79  564.7  42.4  447   28-493    40-513 (516)
 17 PLN02500 cytochrome P450 90B1  100.0 2.3E-74 4.9E-79  559.8  42.4  439   25-494    33-489 (490)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 1.6E-73 3.4E-78  513.6  36.9  451   27-493    47-516 (519)
 19 PLN02774 brassinosteroid-6-oxi 100.0 2.4E-73 5.3E-78  548.0  40.1  431   26-493    27-462 (463)
 20 PF00067 p450:  Cytochrome P450 100.0 1.2E-74 2.5E-79  565.0  29.7  429   32-465     1-440 (463)
 21 KOG0684 Cytochrome P450 [Secon 100.0 3.7E-72   8E-77  491.8  33.5  440   28-490    29-480 (486)
 22 PLN02169 fatty acid (omega-1)- 100.0 1.3E-71 2.9E-76  538.3  40.7  444   30-493    31-498 (500)
 23 PLN02196 abscisic acid 8'-hydr 100.0 1.7E-71 3.6E-76  534.7  41.0  449    3-492     8-460 (463)
 24 PLN03195 fatty acid omega-hydr 100.0 1.4E-71 3.1E-76  543.7  40.0  451   31-493    31-514 (516)
 25 PLN02738 carotene beta-ring hy 100.0 2.1E-70 4.5E-75  536.9  42.9  431   48-492   150-592 (633)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 1.7E-70 3.6E-75  527.2  39.5  434   25-493     2-448 (452)
 27 PLN02302 ent-kaurenoic acid ox 100.0 7.7E-69 1.7E-73  523.8  44.2  414   25-465    37-464 (490)
 28 PLN02987 Cytochrome P450, fami 100.0 7.8E-69 1.7E-73  514.0  42.6  434   26-493    26-467 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 4.1E-69 8.9E-74  521.2  40.1  448   30-492    12-479 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.1E-66 2.3E-71  503.2  40.7  436   38-493    49-498 (502)
 31 PLN02648 allene oxide synthase 100.0 6.2E-61 1.3E-65  455.4  28.6  401   26-465    13-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.3E-54 5.1E-59  406.1  32.1  358   51-465    24-387 (411)
 33 PF12554 MOZART1:  Mitotic-spin  64.6      23  0.0005   21.7   4.3   44  286-329     5-48  (48)
 34 PF05952 ComX:  Bacillus compet  57.7      12 0.00026   23.8   2.4   25  309-333     4-28  (57)
 35 PF15300 INT_SG_DDX_CT_C:  INTS  48.2      11 0.00023   24.9   1.1   44  317-360     4-54  (65)
 36 PF12508 DUF3714:  Protein of u  46.8      17 0.00037   30.5   2.4   43  345-390    51-94  (200)
 37 PRK06789 flagellar motor switc  44.2      31 0.00066   23.5   2.9   40  352-391    21-62  (74)
 38 KOG3653 Transforming growth fa  42.3 1.1E+02  0.0024   29.5   7.1   49   49-97    209-258 (534)
 39 PF14129 DUF4296:  Domain of un  42.1 1.2E+02  0.0026   21.4   6.6   50  283-332    29-78  (87)
 40 PF15330 SIT:  SHP2-interacting  40.0      60  0.0013   24.1   4.1   11   37-47     45-55  (107)
 41 PF09201 SRX:  SRX;  InterPro:   37.4      32  0.0007   26.4   2.4   22  436-457    19-40  (148)
 42 PF12444 Sox_N:  Sox developmen  36.5      24 0.00052   24.7   1.5   21  445-465    60-80  (84)
 43 KOG0114 Predicted RNA-binding   35.0 1.7E+02  0.0037   21.5   5.5   63   26-90      8-76  (124)
 44 COG1610 Uncharacterized conser  32.2 2.1E+02  0.0046   22.5   6.0   54  243-296    49-108 (148)
 45 PF14459 Prok-E2_C:  Prokaryoti  31.3      20 0.00043   26.0   0.5   16  425-440   105-120 (131)
 46 COG0851 MinE Septum formation   28.0 1.2E+02  0.0026   21.4   3.7   18  317-334    35-52  (88)
 47 KOG3506 40S ribosomal protein   27.7      29 0.00062   21.7   0.6   10  429-438    13-22  (56)
 48 PF13625 Helicase_C_3:  Helicas  27.6 1.5E+02  0.0032   22.8   4.8   38   51-90     76-113 (129)
 49 PF13893 RRM_5:  RNA recognitio  26.7 1.4E+02  0.0031   18.5   3.9   36   55-90      1-40  (56)
 50 COG5598 Trimethylamine:corrino  26.7   1E+02  0.0023   29.7   4.3   71  347-460   100-173 (526)
 51 PHA03049 IMV membrane protein;  25.1 2.1E+02  0.0045   18.9   4.2   28    6-35      9-36  (68)
 52 PF05961 Chordopox_A13L:  Chord  25.1 1.8E+02  0.0039   19.3   3.8   17    6-22      9-25  (68)
 53 PF14483 Cut8_M:  Cut8 dimerisa  24.8 1.2E+02  0.0026   17.5   2.8   12  315-326    24-35  (38)
 54 PF09926 DUF2158:  Uncharacteri  24.5      63  0.0014   20.3   1.8   17   63-79      4-20  (53)
 55 KOG1412 Aspartate aminotransfe  23.7 3.9E+02  0.0086   24.4   7.0   75  269-361   331-407 (410)
 56 KOG4241 Mitochondrial ribosoma  23.2 1.2E+02  0.0025   25.4   3.4   40   52-91    124-165 (245)
 57 PF07055 Eno-Rase_FAD_bd:  Enoy  22.5      48   0.001   21.9   1.0   39  317-362    16-54  (65)
 58 PF08492 SRP72:  SRP72 RNA-bind  22.5      57  0.0012   21.1   1.3    8  409-416    44-51  (59)
 59 PRK10597 DNA damage-inducible   21.6 2.3E+02   0.005   19.8   4.2   38   52-89     23-68  (81)
 60 PF07849 DUF1641:  Protein of u  20.5 1.3E+02  0.0029   17.7   2.5   20  307-326    12-31  (42)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-87  Score=630.43  Aligned_cols=456  Identities=43%  Similarity=0.778  Sum_probs=404.2

Q ss_pred             CCCCCCCCCCCCCcccccccCCCC-CcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCC-cccc
Q 011093           27 GSRKLPPGPTPLPIIGNLLELGHK-PHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNV-PESV  104 (494)
Q Consensus        27 ~~~~~pp~p~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~~~~  104 (494)
                      ++.+.||||+++|++||++++... +++.+.++.++|||||++|+|..++|+|+|++.++|++.+++..|+.|+. ....
T Consensus        23 ~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   23 KRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            348999999999999999999776 99999999999999999999999999999999999999999999999987 2244


Q ss_pred             cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHH
Q 011093          105 GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSN  184 (494)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~  184 (494)
                      ..+..++.++.++.+|+.|+.+||.....+++...++.......++++.+++.+.+ ...++++|+...+..++.+++++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~  181 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICR  181 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHH
Confidence            55555678889999999999999999989999999999988889999999999987 22337999999999999999999


Q ss_pred             HHhcccccccCcchHHHHHHHHHHHHHHhcCCCcccccc-ccccCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011093          185 SIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFP-MLRKLD-IQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEH  262 (494)
Q Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (494)
                      .+||.++...++....++.+.+.......+...+.+++| ++.++. ..+..++.......+..++++.|+++.+.. +.
T Consensus       182 ~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~  260 (489)
T KOG0156|consen  182 MLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD  260 (489)
T ss_pred             HHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc
Confidence            999999987655566779999999999999888889999 566553 335667777777779999999999998876 22


Q ss_pred             CCCCchhHHHHHhccccC--CC-CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCC
Q 011093          263 GFADSKDMLDTLLNISES--EE-IDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIE  339 (494)
Q Consensus       263 ~~~~~~d~~~~ll~~~~~--~~-ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  339 (494)
                       + +..|++|.|++..++  .+ ++++++.+.+..+++||.|||++++.|++.+|++||++|+|+++||++++|.+..++
T Consensus       261 -~-~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~  338 (489)
T KOG0156|consen  261 -E-EGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVS  338 (489)
T ss_pred             -C-CCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence             2 338999999998654  22 899999999999999999999999999999999999999999999999999887799


Q ss_pred             ccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCC
Q 011093          340 ESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVD  419 (494)
Q Consensus       340 ~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~  419 (494)
                      .+|+.+||||+|+|+|++|++|++|+.++|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+||||++.+ +
T Consensus       339 e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d  417 (489)
T KOG0156|consen  339 ESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-D  417 (489)
T ss_pred             hhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-c
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999874 2


Q ss_pred             CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093          420 VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV  492 (494)
Q Consensus       420 ~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (494)
                      .+.....++|||.|+|.|||..+|.+|+.++++.|+++|||+..++    ++|+.+. +++...+.++...+.
T Consensus       418 ~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~  485 (489)
T KOG0156|consen  418 GKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPV  485 (489)
T ss_pred             ccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceeeee
Confidence            3335568999999999999999999999999999999999999765    5677777 366777777666543


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.8e-80  Score=604.99  Aligned_cols=473  Identities=31%  Similarity=0.609  Sum_probs=384.8

Q ss_pred             HHHHhhccCCCCCCCCCCCCCCcccccccCCC-CCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccC
Q 011093           18 VITLRSFSKGSRKLPPGPTPLPIIGNLLELGH-KPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLC   96 (494)
Q Consensus        18 ~~~~~~~~~~~~~~pp~p~~~p~lG~~~~~~~-~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~   96 (494)
                      ++..+...+++.+.||||+++|++||+..+.. ++..++.+++++||++|++++|+.++|+++||+++++|+.++...|.
T Consensus        16 ~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~   95 (499)
T PLN03234         16 FFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFT   95 (499)
T ss_pred             HHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCcccc
Confidence            33444444677788999999999999988854 78899999999999999999999999999999999999998877787


Q ss_pred             CCCCcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHH
Q 011093           97 NRNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFD  176 (494)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  176 (494)
                      .++...........+..+.+...++.|+++|+.+..+.|+++++..+.+.++++++.+++.|.+..++++++|+.+++..
T Consensus        96 ~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~  175 (499)
T PLN03234         96 ARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLS  175 (499)
T ss_pred             CCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHH
Confidence            77654333222222333345566789999999864488999999999999999999999999766556778999999999


Q ss_pred             HHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCC-hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          177 TVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLD-IQGVRRRLTRHYIKILEVLDRFIDQR  255 (494)
Q Consensus       177 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (494)
                      +++|+++.++||.+++..+ .+..++.+.+.......+.......+|++..+. +.+..++..+..+.+.+++.++++++
T Consensus       176 ~t~dvi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~  254 (499)
T PLN03234        176 FTNCVVCRQAFGKRYNEYG-TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDET  254 (499)
T ss_pred             HHHHHHHHHHhCCcccccc-hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999986543 234566666655543333223334455543321 12334567778888888899998887


Q ss_pred             HHHHhhcCCCCchhHHHHHhccccC----CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Q 011093          256 LEQRQEHGFADSKDMLDTLLNISES----EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQK  331 (494)
Q Consensus       256 ~~~~~~~~~~~~~d~~~~ll~~~~~----~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  331 (494)
                      ++... ... ...|+++.|++..++    ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++
T Consensus       255 ~~~~~-~~~-~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~  332 (499)
T PLN03234        255 LDPNR-PKQ-ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNV  332 (499)
T ss_pred             Hhhcc-cCC-CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            65432 111 346899998876433    258999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCC-CCCCCCCC
Q 011093          332 VGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW-DDPYSFKP  410 (494)
Q Consensus       332 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p  410 (494)
                      +++...++++++++|||++|||+|+||++|++++.++|.+.+|++++||.|||||.|.++++++||||++| +||++|||
T Consensus       333 ~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~P  412 (499)
T PLN03234        333 IGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIP  412 (499)
T ss_pred             hCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCc
Confidence            98767789999999999999999999999999987689999999999999999999999999999999999 89999999


Q ss_pred             CCccCCCCC--CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCee
Q 011093          411 ERFLGSDVD--VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLR  488 (494)
Q Consensus       411 ~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (494)
                      |||+++...  .+.....|+|||+|+|.|+|++||++|++++++.|+++|+|++.++..+..+......+++.+++.++.
T Consensus       413 eR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (499)
T PLN03234        413 ERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLV  492 (499)
T ss_pred             hhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeE
Confidence            999975432  223356899999999999999999999999999999999999987643444555556677888888999


Q ss_pred             Eeeee
Q 011093          489 VVPVA  493 (494)
Q Consensus       489 ~~~~~  493 (494)
                      +.+++
T Consensus       493 ~~~~~  497 (499)
T PLN03234        493 LAPTK  497 (499)
T ss_pred             EEeec
Confidence            99875


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.5e-81  Score=576.71  Aligned_cols=468  Identities=25%  Similarity=0.419  Sum_probs=368.6

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCCCCCCcccccccCC--CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHH
Q 011093           11 LLFTWVWVITLRSFSKGSRKLPPGPTPLPIIGNLLELG--HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVL   88 (494)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~pp~p~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~   88 (494)
                      ++..++|.+.++.+....++..|+|++.|++||+..+.  +.+.....+...+||+++.++.+.++.++|+|||.+++|+
T Consensus        12 ~l~~l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~   91 (499)
T KOG0158|consen   12 LLLVLLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEIL   91 (499)
T ss_pred             HHHHHHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHH
Confidence            33334455555554445556889999999999998873  3345555556666699999999999999999999999999


Q ss_pred             HhcCcccCCCC--CcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCC
Q 011093           89 QDHDKSLCNRN--VPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGE  166 (494)
Q Consensus        89 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  166 (494)
                      .++..+|.++.  .......  ......++...|+.||++|..+. |.|++.+++++.+.+++.++++++.+.+....+.
T Consensus        92 ik~F~~F~~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~  168 (499)
T KOG0158|consen   92 IKDFDNFYNRKRPIYGDPED--PLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQ  168 (499)
T ss_pred             HHhCccCcCCCCCCcCCCCC--cccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            99988888843  2222221  11335678889999999999998 9999999999999999999999999987544336


Q ss_pred             ceehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHH-hcCCCc----cccccccccCChhhHHHHHHHHH
Q 011093          167 PIDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVE-AGRPNL----SDFFPMLRKLDIQGVRRRLTRHY  241 (494)
Q Consensus       167 ~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~P~l~~~~~~~~~~~~~~~~  241 (494)
                      .+++.+.+.++|.|+|+.++||.+.+...+.. .++...-...... .....+    ...+|.+...      -+.....
T Consensus       169 ~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~-~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~------l~~~~~~  241 (499)
T KOG0158|consen  169 EGEIKDLCARYTTDVIGSCAFGLDANSLRDPK-AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP------LRVKLFP  241 (499)
T ss_pred             CccHHHHHHHHHHHHHhHhhcccchhhhcCch-HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh------hhcccCh
Confidence            78899999999999999999999998765432 4444433333332 111111    1122222111      1122334


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-------C-CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 011093          242 IKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-------E-EIDRNDIKFVILDLFAAGTETTSSTLEWAVTE  313 (494)
Q Consensus       242 ~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-------~-~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~  313 (494)
                      ++..+++.+.+.++++.++..+. .++|+++.|++.+.+       . .+|.+|++++++.+++||.||||++++.++|+
T Consensus       242 ~~~~~~~~~~v~~~v~~R~~~~~-~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYe  320 (499)
T KOG0158|consen  242 EDVTDFFRKLVNSRVEQREKENI-ERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYE  320 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence            55666677777777776654443 788999999998742       2 59999999999999999999999999999999


Q ss_pred             HHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeec-cEEeCCCCEEEech
Q 011093          314 LLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEIT-GFIIPKGAQVLVNA  392 (494)
Q Consensus       314 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~  392 (494)
                      ||+|||+|+|||+||++++.....++++.+.+|+||++||+||||+||+++. +.|.+++|++++ ++.||||+.|.++.
T Consensus       321 LA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~  399 (499)
T KOG0158|consen  321 LAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPT  399 (499)
T ss_pred             HhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeec
Confidence            9999999999999999997765559999999999999999999999999998 789999999999 99999999999999


Q ss_pred             hhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCC
Q 011093          393 WAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNID  472 (494)
Q Consensus       393 ~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  472 (494)
                      +++||||++||||++|+||||.+++.+ ..+++.|+|||.|||.|+|.+||.+|+|+.|++||++|+++..+. +... .
T Consensus       400 ~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t~~~-~  476 (499)
T KOG0158|consen  400 YALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-TIIP-L  476 (499)
T ss_pred             ccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-ccCc-c
Confidence            999999999999999999999976644 345679999999999999999999999999999999999999773 2222 2


Q ss_pred             ccccccccccCCCCeeEeeee
Q 011093          473 MEEKFGITLQKAQPLRVVPVA  493 (494)
Q Consensus       473 ~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      .....+.+..|+.+++++..+
T Consensus       477 ~~~~~~~~l~pk~gi~Lkl~~  497 (499)
T KOG0158|consen  477 EGDPKGFTLSPKGGIWLKLEP  497 (499)
T ss_pred             cCCccceeeecCCceEEEEEe
Confidence            211235677788888777543


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.4e-80  Score=604.19  Aligned_cols=464  Identities=27%  Similarity=0.476  Sum_probs=365.0

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCC--CcHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc
Q 011093           26 KGSRKLPPGPTPLPIIGNLLELGHK--PHKSLAELAKVHG-PIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE  102 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~~~~--~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  102 (494)
                      +++.+.||||+++|++||++.+..+  .+.++.++.++|| +||++++|++++|+|+||+++++++.+++..|..++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            4466789999999999999887432  3678999999999 899999999999999999999999998888888876533


Q ss_pred             cccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093          103 SVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL  182 (494)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~  182 (494)
                      ....+..+..+.++..+|+.|+++|+.++.+.+++..++.+.+.++++++.+++.+.+...+++++|+.+.+..++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            32222221123467788999999999998677877777788888888999998888664445678999999999999999


Q ss_pred             HHHHhcccccccC----cchHHHHHHHHHHHHHHhc---CCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          183 SNSIFSVDLADAN----SDSAREFKDSMWGLMVEAG---RPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQR  255 (494)
Q Consensus       183 ~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (494)
                      ++++||.++...+    ++...+..+.+..++....   ...+.+++|++.++...+..+...+..+.+.+++.+.++++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999874321    1111223333343332221   11233556665544222333445556677788888888887


Q ss_pred             HHHHhhcCCCCchhHHHHHhccccC---CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhh
Q 011093          256 LEQRQEHGFADSKDMLDTLLNISES---EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKV  332 (494)
Q Consensus       256 ~~~~~~~~~~~~~d~~~~ll~~~~~---~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  332 (494)
                      ++..+.+......|+++.|++..++   ..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++||++++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            7654322211346999999986543   2489999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCC
Q 011093          333 GKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPER  412 (494)
Q Consensus       333 ~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R  412 (494)
                      +++..++++++++|||++|||+|+||++|++++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|||
T Consensus       373 g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeR  452 (543)
T PLN02971        373 GKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPER  452 (543)
T ss_pred             CCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCccc
Confidence            87778999999999999999999999999999878899999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCC--CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccc--cCCCCee
Q 011093          413 FLGSDVDV--KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITL--QKAQPLR  488 (494)
Q Consensus       413 ~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  488 (494)
                      |++++.+.  ...+..|+|||.|+|.|+|++||+.|+++++++||++|+|++.++.  ..+++.+.++ +.  ++...+.
T Consensus       453 fl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~  529 (543)
T PLN02971        453 HLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVMV  529 (543)
T ss_pred             CCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccccceee
Confidence            99754321  1234579999999999999999999999999999999999987642  2466666655 44  3434444


Q ss_pred             Eeee
Q 011093          489 VVPV  492 (494)
Q Consensus       489 ~~~~  492 (494)
                      +.+|
T Consensus       530 ~~~~  533 (543)
T PLN02971        530 GELR  533 (543)
T ss_pred             eeec
Confidence            4444


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=6.3e-80  Score=601.47  Aligned_cols=465  Identities=42%  Similarity=0.751  Sum_probs=377.8

Q ss_pred             CCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccc
Q 011093           27 GSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGS  106 (494)
Q Consensus        27 ~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~  106 (494)
                      +..+.||||+++|++|+++.+..++++++.+|+++||+||++++|+.++++++||+++++++.++...|.+++.......
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            44467999999999999988877899999999999999999999999999999999999999987777877654333222


Q ss_pred             cccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHH
Q 011093          107 IQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSI  186 (494)
Q Consensus       107 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~  186 (494)
                      +...+.+.+++.+|+.|+++|+.+..+.|+.++++.+.+.++++++.+++.|.+. .+++++|+.+++..+++|+++..+
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHHHH
Confidence            2222345677778999999999997578999999999999999999999999764 245789999999999999999999


Q ss_pred             hcccccccC-cchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011093          187 FSVDLADAN-SDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFA  265 (494)
Q Consensus       187 fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (494)
                      ||.++...+ +.....+.+.+..+...........++|++.++......++..+..+.+.+++.+.++++++....+.. 
T Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~-  268 (517)
T PLN02687        190 VGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSE-  268 (517)
T ss_pred             hCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCc-
Confidence            999875432 233456777766666544432233456655443222223455566777888888888887765432122 


Q ss_pred             CchhHHHHHhccccC-------CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCC
Q 011093          266 DSKDMLDTLLNISES-------EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLI  338 (494)
Q Consensus       266 ~~~d~~~~ll~~~~~-------~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  338 (494)
                      ...|+++.|++..++       ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++++..+
T Consensus       269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  348 (517)
T PLN02687        269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLV  348 (517)
T ss_pred             ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCC
Confidence            456999999986432       3589999999999999999999999999999999999999999999999999877778


Q ss_pred             CccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCC
Q 011093          339 EESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDV  418 (494)
Q Consensus       339 ~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~  418 (494)
                      +.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||++.+.
T Consensus       349 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~  428 (517)
T PLN02687        349 SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE  428 (517)
T ss_pred             CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCC
Confidence            99999999999999999999999999877899999999999999999999999999999999999999999999997532


Q ss_pred             C----CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093          419 D----VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA  493 (494)
Q Consensus       419 ~----~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      .    .......|+|||.|+|.|+|++||.+|+++++++||++|++++.++..+.+++......+++.+..++.+++|+
T Consensus       429 ~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (517)
T PLN02687        429 HAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRP  507 (517)
T ss_pred             ccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeecc
Confidence            1    11234579999999999999999999999999999999999997663333344444455666666677776654


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.9e-79  Score=592.04  Aligned_cols=466  Identities=38%  Similarity=0.678  Sum_probs=376.3

Q ss_pred             hccCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc
Q 011093           23 SFSKGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE  102 (494)
Q Consensus        23 ~~~~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  102 (494)
                      ...+...+.||||+++|++|++..+..+++.++.+++++||+||++++|+.++|+|+||+++++++.++...|..++...
T Consensus        24 ~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~  103 (504)
T PLN00110         24 LLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNA  103 (504)
T ss_pred             HhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            34466778899999999999998777678999999999999999999999999999999999999998777777766433


Q ss_pred             cccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093          103 SVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL  182 (494)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~  182 (494)
                      .......++.+.+++.+|+.|+++|+.++.+.|+.++++.+.+.+.+++..+++.+.+...+++++|+.+++..+++|++
T Consensus       104 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi  183 (504)
T PLN00110        104 GATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMI  183 (504)
T ss_pred             chhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHH
Confidence            22222222334567788999999999998557999999999999999999999998765556778999999999999999


Q ss_pred             HHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011093          183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEH  262 (494)
Q Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (494)
                      +..+||.++......+..++.+.+...+.......+..++|++.++......++..+..+.+.+++.+.++++++.... 
T Consensus       184 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  262 (504)
T PLN00110        184 GQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE-  262 (504)
T ss_pred             HHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Confidence            9999999873222223456777777665544433334556665443222333445556667777778888777654321 


Q ss_pred             CCCCchhHHHHHhccccC---CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCC
Q 011093          263 GFADSKDMLDTLLNISES---EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIE  339 (494)
Q Consensus       263 ~~~~~~d~~~~ll~~~~~---~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  339 (494)
                      .. ...|+++.|++..++   ..++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++++++..++
T Consensus       263 ~~-~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~  341 (504)
T PLN00110        263 RK-GNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLV  341 (504)
T ss_pred             cc-cCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence            11 345899999976432   46999999999999999999999999999999999999999999999999998767789


Q ss_pred             ccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCC
Q 011093          340 ESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVD  419 (494)
Q Consensus       340 ~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~  419 (494)
                      ++++++|||++|||+||||++|++++.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.+..
T Consensus       342 ~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~  421 (504)
T PLN00110        342 ESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNA  421 (504)
T ss_pred             HHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCc
Confidence            99999999999999999999999998778999999999999999999999999999999999999999999999964321


Q ss_pred             CC---CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093          420 VK---GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA  493 (494)
Q Consensus       420 ~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      ..   ...+.|+|||.|+|.|+|++||.+|+++++++|+++|++++.++   ...+.....+++..++.++.++.++
T Consensus       422 ~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  495 (504)
T PLN00110        422 KIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG---VELNMDEAFGLALQKAVPLSAMVTP  495 (504)
T ss_pred             ccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC---CccCcccccccccccCCCceEeecc
Confidence            11   12357999999999999999999999999999999999998665   2334433456677777677666543


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.4e-78  Score=593.30  Aligned_cols=488  Identities=31%  Similarity=0.592  Sum_probs=386.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHH
Q 011093            4 LISCVLWLLFTWVWVITLRSFSKGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATM   83 (494)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~   83 (494)
                      +.++++.+++.|+++.+.+...+++.+.||||+++|++||+..+..+++.++.+++++||++|++++|+.++++++||+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~   85 (514)
T PLN03112          6 LSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPEL   85 (514)
T ss_pred             HHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHH
Confidence            34555555666666666666667788899999999999999988777899999999999999999999999999999999


Q ss_pred             HHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhcc
Q 011093           84 AKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCR  163 (494)
Q Consensus        84 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~  163 (494)
                      +++|+.++...|.+++..........+..+.++..+|+.|+.+|+.+..+.|+.++++.+.+.+.++++.+++.+.+...
T Consensus        86 ~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~  165 (514)
T PLN03112         86 IREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ  165 (514)
T ss_pred             HHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc
Confidence            99999888777877654322221112122334667899999999997657899999999999999999999998765444


Q ss_pred             CCCceehhHHHHHHHHHHHHHHHhcccccccCc---chHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHH
Q 011093          164 TGEPIDVGQAAFDTVVNLLSNSIFSVDLADANS---DSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRH  240 (494)
Q Consensus       164 ~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~  240 (494)
                      +++++|+.+.+..+++++++.++||.++.....   +...++.+.+..+........+..++|++.++......++..+.
T Consensus       166 ~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  245 (514)
T PLN03112        166 TGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREV  245 (514)
T ss_pred             cCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHH
Confidence            567899999999999999999999998743221   23455666666655443332333455655443222333455666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC-CCCchhHHHHHhccccC---CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 011093          241 YIKILEVLDRFIDQRLEQRQEHG-FADSKDMLDTLLNISES---EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLN  316 (494)
Q Consensus       241 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~---~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~  316 (494)
                      .+.+.+++++.++++++..+... ..+..|+++.|+++.++   ..++++++.+++..+++||+|||+++++|++++|++
T Consensus       246 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~  325 (514)
T PLN03112        246 EKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIK  325 (514)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHh
Confidence            77777888888887766543211 11346999999986433   258999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhc
Q 011093          317 NSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIG  396 (494)
Q Consensus       317 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~  396 (494)
                      ||++|+++++|+++++++++.++.+++++|||++|||+||+|++|++++.++|.+.+|++++||.||||+.|.++.+++|
T Consensus       326 ~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h  405 (514)
T PLN03112        326 NPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLG  405 (514)
T ss_pred             ChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhh
Confidence            99999999999999998777789999999999999999999999999987789999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCccCCCC---CC-CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCC
Q 011093          397 RDTSTWDDPYSFKPERFLGSDV---DV-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNID  472 (494)
Q Consensus       397 ~d~~~~~~p~~F~p~R~l~~~~---~~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  472 (494)
                      |||++|+||++|+|+||..+++   +. ......|+|||.|+|.|+|++||++|+++++++||++|||++.++.....++
T Consensus       406 ~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  485 (514)
T PLN03112        406 RNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDID  485 (514)
T ss_pred             CCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCC
Confidence            9999999999999999865421   11 1224579999999999999999999999999999999999987653333445


Q ss_pred             ccccccccccCCCCeeEee
Q 011093          473 MEEKFGITLQKAQPLRVVP  491 (494)
Q Consensus       473 ~~~~~~~~~~~~~~~~~~~  491 (494)
                      +....+++.+++.++.+..
T Consensus       486 ~~~~~~~~~~~~~~~~~~~  504 (514)
T PLN03112        486 TQEVYGMTMPKAKPLRAVA  504 (514)
T ss_pred             CccccCcccccCCCeEEEe
Confidence            5445566665555554443


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.2e-78  Score=592.40  Aligned_cols=459  Identities=35%  Similarity=0.686  Sum_probs=366.1

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccc
Q 011093           26 KGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVG  105 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  105 (494)
                      +++.+.||||+++|++|++..+...++.++.+|+++||++|++++|+.++|+|+||+++++|+.++...|..++......
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            44568899999999999998776667788999999999999999999999999999999999998777777665432222


Q ss_pred             ccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHH
Q 011093          106 SIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNS  185 (494)
Q Consensus       106 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~  185 (494)
                      ....++.+.+++.+|+.|+++|+.+..+.|+.+.++.+.+. .++++.+++.+..  ..++++|+.+++..+++|+++++
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~~  188 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITYRA  188 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHhH
Confidence            22222234567788999999999954488999999888886 4678999998864  34678999999999999999999


Q ss_pred             HhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--
Q 011093          186 IFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHG--  263 (494)
Q Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--  263 (494)
                      +||.+++..    ..++.+.+..+...........++|++.++......++..+..+.+.+++.+.+++++++.....  
T Consensus       189 ~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  264 (516)
T PLN02183        189 AFGSSSNEG----QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNAD  264 (516)
T ss_pred             hhcCcccch----HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            999876532    24566666555443333333455666544322223455666777888888888888776543211  


Q ss_pred             ---CCCchhHHHHHhccccC-------------CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHH
Q 011093          264 ---FADSKDMLDTLLNISES-------------EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLE  327 (494)
Q Consensus       264 ---~~~~~d~~~~ll~~~~~-------------~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  327 (494)
                         .....|+++.+++...+             ..++++++..++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       265 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  344 (516)
T PLN02183        265 NDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQE  344 (516)
T ss_pred             cccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence               11235899999975321             24899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCC
Q 011093          328 LEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYS  407 (494)
Q Consensus       328 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  407 (494)
                      ++++++.+..++.+++++||||+|||+||||++|++++. .|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus       345 i~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~  423 (516)
T PLN02183        345 LADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDT  423 (516)
T ss_pred             HHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccc
Confidence            999998666789999999999999999999999999986 5999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCC-CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCC
Q 011093          408 FKPERFLGSDVD-VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQP  486 (494)
Q Consensus       408 F~p~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (494)
                      |+||||++++.+ .....+.|+|||.|+|.|+|++||++|+++++|+|+++|++++.++..+...+....++.+.++.++
T Consensus       424 F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (516)
T PLN02183        424 FKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATR  503 (516)
T ss_pred             cCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCC
Confidence            999999975432 1234458999999999999999999999999999999999998776322234444444555556667


Q ss_pred             eeEeee
Q 011093          487 LRVVPV  492 (494)
Q Consensus       487 ~~~~~~  492 (494)
                      +.+.++
T Consensus       504 ~~~~~~  509 (516)
T PLN02183        504 LVAVPT  509 (516)
T ss_pred             cEEEee
Confidence            666655


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1e-78  Score=591.45  Aligned_cols=471  Identities=31%  Similarity=0.620  Sum_probs=371.8

Q ss_pred             HhhccCCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCC
Q 011093           21 LRSFSKGSRKLPPGPTPLPIIGNLLEL-GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRN   99 (494)
Q Consensus        21 ~~~~~~~~~~~pp~p~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~   99 (494)
                      +....++..+.||||+++|++||++.+ ..++..++.+|+++||++|++++|+.++|+|+||+.+++|+.+++..|.+++
T Consensus        20 ~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~   99 (502)
T PLN02966         20 YQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP   99 (502)
T ss_pred             HhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCC
Confidence            444456667889999999999999887 4468999999999999999999999999999999999999997776676554


Q ss_pred             CcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHH
Q 011093          100 VPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVV  179 (494)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~  179 (494)
                      ..........+..+..+...|+.|+.+|+.+..+.|+.+++..+.+.+.+.++.+++.|.+....++++|+.+++..+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~  179 (502)
T PLN02966        100 PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTN  179 (502)
T ss_pred             CCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Confidence            33222222111222334566899999999944489999999999999999999999999765555678999999999999


Q ss_pred             HHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          180 NLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLD-IQGVRRRLTRHYIKILEVLDRFIDQRLEQ  258 (494)
Q Consensus       180 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (494)
                      |+++.++||.+++..+. +..++.+.+...........+..++|++..+. +.+..+......+...+++++.+++..+.
T Consensus       180 dvi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (502)
T PLN02966        180 SVVCRQAFGKKYNEDGE-EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDP  258 (502)
T ss_pred             HHHHHHHhCCccCccch-HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999865432 34556666555544433333334455432221 12222333345556667777777766543


Q ss_pred             HhhcCCCCchhHHHHHhccccC----CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCC
Q 011093          259 RQEHGFADSKDMLDTLLNISES----EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGK  334 (494)
Q Consensus       259 ~~~~~~~~~~d~~~~ll~~~~~----~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  334 (494)
                      +....  +..++++.|++..++    ..++++++.++++++++||+|||+++++|++++|++||++|+++++|+++++++
T Consensus       259 ~~~~~--~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~  336 (502)
T PLN02966        259 KRVKP--ETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKE  336 (502)
T ss_pred             ccccc--ccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence            22111  345899999975433    358999999999999999999999999999999999999999999999999874


Q ss_pred             C--CCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCC-CCCCCCCCC
Q 011093          335 G--NLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW-DDPYSFKPE  411 (494)
Q Consensus       335 ~--~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~  411 (494)
                      +  ..++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++| |||++|+||
T Consensus       337 ~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  416 (502)
T PLN02966        337 KGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPE  416 (502)
T ss_pred             cCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChh
Confidence            2  3578999999999999999999999999987789999999999999999999999999999999999 999999999


Q ss_pred             CccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEee
Q 011093          412 RFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVP  491 (494)
Q Consensus       412 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (494)
                      ||++++.+.......|+|||.|+|.|+|++||.+|+++++++||++|+|++.++..++.++.+...+++..++.++.++.
T Consensus       417 Rwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (502)
T PLN02966        417 RFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP  496 (502)
T ss_pred             hhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEE
Confidence            99975432223445899999999999999999999999999999999999987644444555555566554555888888


Q ss_pred             eeC
Q 011093          492 VAI  494 (494)
Q Consensus       492 ~~~  494 (494)
                      ++.
T Consensus       497 ~~~  499 (502)
T PLN02966        497 EKV  499 (502)
T ss_pred             EeC
Confidence            763


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.4e-77  Score=583.56  Aligned_cols=466  Identities=30%  Similarity=0.523  Sum_probs=358.2

Q ss_pred             cCCCCCCCCCCCCCCcccccccCCCC-CcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccc
Q 011093           25 SKGSRKLPPGPTPLPIIGNLLELGHK-PHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPES  103 (494)
Q Consensus        25 ~~~~~~~pp~p~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  103 (494)
                      ..++.+.||||++.|++|++..+.++ .+..+.+|+++||+||++++|+.++|+|+||+.+++|+.+++..|.+++....
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            35667899999999999999887654 46899999999999999999999999999999999999887777766554333


Q ss_pred             ccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhcc-CCCceehhHHHHHHHHHHH
Q 011093          104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCR-TGEPIDVGQAAFDTVVNLL  182 (494)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~~~~  182 (494)
                      ...+...+.+.++..+|+.|+++|+.+..+.|++++++.+.+.++++++.+++++.+... .++.+++.+++..+++|++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence            333322234456778899999999998668899999999999999999999999976432 2456999999999999999


Q ss_pred             HHHHhcccccccCcchHHHHHHHHHHHHHHhcC--CCccccccccccCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 011093          183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGR--PNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVL-DRFIDQRLEQR  259 (494)
Q Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~  259 (494)
                      +.++||.+++..++.....+.............  .....++|++... .....+...+......+.+ +..++++++..
T Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        185 YRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998754433333333332222221111  1122334443321 1111122222222222223 33455554432


Q ss_pred             hhc--CCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCC
Q 011093          260 QEH--GFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNL  337 (494)
Q Consensus       260 ~~~--~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~  337 (494)
                      +..  ..+...|+++.|+++.+++.++++++..++..+++||+|||+++++|++++|++||++|++|++||+++++++..
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~  343 (503)
T PLN02394        264 SAKGMDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQ  343 (503)
T ss_pred             hhccCCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCC
Confidence            211  111346899999987766679999999999999999999999999999999999999999999999999987667


Q ss_pred             CCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCC
Q 011093          338 IEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSD  417 (494)
Q Consensus       338 ~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~  417 (494)
                      ++++++++||||+|||+||||++|++++..+|.+.+|++++||.||+||.|.++++++||||++|+||++|+||||++.+
T Consensus       344 ~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~  423 (503)
T PLN02394        344 VTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEE  423 (503)
T ss_pred             CCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCC
Confidence            88999999999999999999999999998889999999999999999999999999999999999999999999998754


Q ss_pred             CC--CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccc---cccccCCCCeeEeee
Q 011093          418 VD--VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKF---GITLQKAQPLRVVPV  492 (494)
Q Consensus       418 ~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  492 (494)
                      .+  .......|+|||.|+|.|+|++||++|+++++++++++|++++.++.  ..++..+..   .+..+....+.+.||
T Consensus       424 ~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (503)
T PLN02394        424 AKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ--SKIDVSEKGGQFSLHIAKHSTVVFKPR  501 (503)
T ss_pred             CcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC--CcCccccccCceeeccCCCceEEeecC
Confidence            32  12234579999999999999999999999999999999999987662  124554444   233566666777676


Q ss_pred             e
Q 011093          493 A  493 (494)
Q Consensus       493 ~  493 (494)
                      .
T Consensus       502 ~  502 (503)
T PLN02394        502 S  502 (503)
T ss_pred             C
Confidence            3


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3e-77  Score=579.77  Aligned_cols=455  Identities=28%  Similarity=0.452  Sum_probs=353.9

Q ss_pred             HhhccCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCC
Q 011093           21 LRSFSKGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNV  100 (494)
Q Consensus        21 ~~~~~~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~  100 (494)
                      +..+++...+.+|||+++|++||+..+..+++..+.+++++||+||++++|+.++|+++||+++++|+.++...|..++.
T Consensus        20 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~   99 (482)
T PTZ00404         20 YKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPK   99 (482)
T ss_pred             HHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCC
Confidence            33344566788999999999999988877899999999999999999999999999999999999999876666665543


Q ss_pred             cccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHH
Q 011093          101 PESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVN  180 (494)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~  180 (494)
                      ......... +.+ +++.+|+.|+++|+.++ +.|+.+.++.+.+.+.+.++.+++.|.+..+.++.+|+.+++..+++|
T Consensus       100 ~~~~~~~~~-~~~-l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d  176 (482)
T PTZ00404        100 IPSIKHGTF-YHG-IVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMS  176 (482)
T ss_pred             cceeeeecc-CCc-eeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHH
Confidence            332221111 344 45668999999999998 889999999999999999999999997654456789999999999999


Q ss_pred             HHHHHHhcccccccCc---chHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          181 LLSNSIFSVDLADANS---DSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLE  257 (494)
Q Consensus       181 ~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (494)
                      +++.++||.+++..++   +....+.+.+..++..........+++++... .........+..+.+.+++.+.++++.+
T Consensus       177 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  255 (482)
T PTZ00404        177 AMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLK  255 (482)
T ss_pred             HHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998864321   22355666666665544433222233322211 1111122233444555555555554433


Q ss_pred             HHhhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCC
Q 011093          258 QRQEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGN  336 (494)
Q Consensus       258 ~~~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  336 (494)
                      ..   ..+...|+++.|+++..+ .....+++++++..+++||+|||+++++|++++|++||++|++|++|++++++++.
T Consensus       256 ~~---~~~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~  332 (482)
T PTZ00404        256 TI---DPEVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRN  332 (482)
T ss_pred             cc---CCCCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCC
Confidence            21   111346899999987532 12223348899999999999999999999999999999999999999999998766


Q ss_pred             CCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceee-ccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccC
Q 011093          337 LIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEI-TGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLG  415 (494)
Q Consensus       337 ~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~  415 (494)
                      .++++++++||||+|||+||||++|+++..++|.+.+|+++ +||.||||+.|.++.+++||||++|+||++|+||||++
T Consensus       333 ~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~  412 (482)
T PTZ00404        333 KVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLN  412 (482)
T ss_pred             CCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCC
Confidence            78999999999999999999999999997678999999999 99999999999999999999999999999999999986


Q ss_pred             CCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEee
Q 011093          416 SDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVP  491 (494)
Q Consensus       416 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (494)
                      ..     ....|+|||.|+|.|+|++||.+|++++++.++++|+|+..++   .+.+.....++++. +.++.+..
T Consensus       413 ~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~~~~~~~-~~~~~v~~  479 (482)
T PTZ00404        413 PD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDG---KKIDETEEYGLTLK-PNKFKVLL  479 (482)
T ss_pred             CC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCC---CCCCcccccceeec-CCCceeee
Confidence            42     3358999999999999999999999999999999999998655   23333333444444 33455443


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=7.3e-76  Score=573.18  Aligned_cols=460  Identities=28%  Similarity=0.478  Sum_probs=356.4

Q ss_pred             CCCCCCCCCCCCCCcccccccCC---CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc
Q 011093           26 KGSRKLPPGPTPLPIIGNLLELG---HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE  102 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~~---~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  102 (494)
                      ++..+.||||+++|++|++..+.   .++++++.+|+++||++|++++|+.++|+|+||+++++++.++...|..++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            45667899999999999987653   356788999999999999999999999999999999999998887787765433


Q ss_pred             cccccccCCCCcc-cccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHH
Q 011093          103 SVGSIQKDEYGIP-WLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNL  181 (494)
Q Consensus       103 ~~~~~~~~~~~~~-~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~  181 (494)
                      ....+. .+.+.+ +..+|+.|+++||.+..+.|+.++++.+.+.+.+.++.+++.|.+....++.+|+.+.+..++.++
T Consensus       111 ~~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        111 SSRLLG-ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             chhhhc-cCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence            222221 122232 236899999999854448999999999999999999999999976544455789999999999999


Q ss_pred             HHHHHhcccccccCcchHHHHHHHHHHHHHHhc-CCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011093          182 LSNSIFSVDLADANSDSAREFKDSMWGLMVEAG-RPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQ  260 (494)
Q Consensus       182 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (494)
                      ++.++||.+++..   ....+............ ...+..++|.+.+.......++..+..+.+.+++.++++++++..+
T Consensus       190 i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (519)
T PLN00168        190 LVLMCFGERLDEP---AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKN  266 (519)
T ss_pred             HHHHHcCCCcChh---hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999987532   12233333333322221 1223345564432211122234556777888888899988876532


Q ss_pred             h--c-CC------CCchhHHHHHhcccc--C--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHH
Q 011093          261 E--H-GF------ADSKDMLDTLLNISE--S--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLE  327 (494)
Q Consensus       261 ~--~-~~------~~~~d~~~~ll~~~~--~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  327 (494)
                      .  . +.      ....|+++.|++...  +  ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|
T Consensus       267 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~E  346 (519)
T PLN00168        267 HLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDE  346 (519)
T ss_pred             hccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            1  0 10      013589999997542  1  35999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCC-CCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCC
Q 011093          328 LEQKVGKG-NLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPY  406 (494)
Q Consensus       328 i~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  406 (494)
                      |+++++++ ..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus       347 i~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~  426 (519)
T PLN00168        347 IKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPM  426 (519)
T ss_pred             HHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcc
Confidence            99999753 56899999999999999999999999999877899999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCC----C-CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccc
Q 011093          407 SFKPERFLGSDVD----V-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITL  481 (494)
Q Consensus       407 ~F~p~R~l~~~~~----~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  481 (494)
                      +|+||||++.+..    . ....+.|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++.   ..+.....+++.
T Consensus       427 ~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~  503 (519)
T PLN00168        427 EFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEKREFTT  503 (519)
T ss_pred             ccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhhceeEE
Confidence            9999999964311    1 1223579999999999999999999999999999999999987652   233322223333


Q ss_pred             cC--CCCeeEeee
Q 011093          482 QK--AQPLRVVPV  492 (494)
Q Consensus       482 ~~--~~~~~~~~~  492 (494)
                      .+  ..++.+++|
T Consensus       504 ~~~~~~~~~~~~R  516 (519)
T PLN00168        504 VMAKPLRARLVPR  516 (519)
T ss_pred             eecCCcEEEEEec
Confidence            33  344555555


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.8e-75  Score=563.22  Aligned_cols=450  Identities=24%  Similarity=0.463  Sum_probs=355.1

Q ss_pred             CCCCCCCCcccccccCC-CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccC
Q 011093           32 PPGPTPLPIIGNLLELG-HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKD  110 (494)
Q Consensus        32 pp~p~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  110 (494)
                      ||||+++|++||++++. .+++.++.+|+++||++|++++|+.++++|+||+++++|+.++...|..++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885 56899999999999999999999999999999999999999888888776543333323221


Q ss_pred             CCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhc
Q 011093          111 EYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCR--TGEPIDVGQAAFDTVVNLLSNSIFS  188 (494)
Q Consensus       111 ~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~~~~~~~~fG  188 (494)
                      +..+....+|+.|+.+|+.+..+.|+...++.+.+.+++.++.+++.+.+...  .++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22233334689999999988767888888888999988888888888865433  3578999999999999999999999


Q ss_pred             ccccccCcch-------HHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011093          189 VDLADANSDS-------AREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQE  261 (494)
Q Consensus       189 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (494)
                      .+++......       ...+...+..++.......+..++|.++++......+...+......+++++.+++++++.. 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA-  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            9876532111       12233334444443333333456776655432223333333334455677777777766533 


Q ss_pred             cCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCcc
Q 011093          262 HGFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEES  341 (494)
Q Consensus       262 ~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  341 (494)
                      .+. ...|+++.|++..  ..++++++.+++.++++||+|||+++++|++++|++||++|+++++||+++++++. ++.+
T Consensus       240 ~~~-~~~d~l~~ll~~~--~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~  315 (466)
T PLN02655        240 RGE-ERDCYLDFLLSEA--THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEE  315 (466)
T ss_pred             CCC-CcccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHH
Confidence            222 3458999999864  45899999999999999999999999999999999999999999999999998644 8999


Q ss_pred             ccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCC
Q 011093          342 DITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVK  421 (494)
Q Consensus       342 ~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~  421 (494)
                      ++++||||+||++||||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|+||++.+... 
T Consensus       316 ~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~-  394 (466)
T PLN02655        316 DLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES-  394 (466)
T ss_pred             HHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc-
Confidence            9999999999999999999999987789999999999999999999999999999999999999999999999754221 


Q ss_pred             CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEee
Q 011093          422 GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVP  491 (494)
Q Consensus       422 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (494)
                      .....++|||.|+|.|+|++||..|+++++++||++|+|++.++..    ...+..+++..++.++.++.
T Consensus       395 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  460 (466)
T PLN02655        395 ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE----EKEDTVQLTTQKLHPLHAHL  460 (466)
T ss_pred             CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc----cccchhheeEeecCCcEEEE
Confidence            1235799999999999999999999999999999999999876531    11223455565666666654


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.9e-75  Score=561.03  Aligned_cols=451  Identities=28%  Similarity=0.447  Sum_probs=361.3

Q ss_pred             CCCCCCCCCCCCcccccccCCC---CCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-c
Q 011093           28 SRKLPPGPTPLPIIGNLLELGH---KPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-S  103 (494)
Q Consensus        28 ~~~~pp~p~~~p~lG~~~~~~~---~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~  103 (494)
                      ....||||+++|++|++.++.+   +...++.++..+||++|+.|+||.++++++||+.+++|+.++...+.+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5677999999999999988843   46678899999999999999999999999999999999976655555554444 4


Q ss_pred             ccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHH
Q 011093          104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLS  183 (494)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~  183 (494)
                      ...+.  |.|++++. |+.|+.+||+++ +.|+.+.++.+...+.+....+...+.... .++.+|+++.+.++++|+++
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHH
Confidence            43443  55776666 999999999998 999999999999999999988888876632 33349999999999999999


Q ss_pred             HHHhcccccccCcchHHHHHHHHHHHHHHhcCCCcccccc-ccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011093          184 NSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFP-MLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEH  262 (494)
Q Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (494)
                      .++||......+.+...++.+++..........   -..| +...+...+..++..++.+.++++++++|.+++++..+.
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~  264 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKE  264 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999993332222333456666666444333221   1123 222221122457778889999999999999999876543


Q ss_pred             CC---CCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCC-C
Q 011093          263 GF---ADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNL-I  338 (494)
Q Consensus       263 ~~---~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~  338 (494)
                      +.   ....|+++.+....+ ..++++++.+++.++++||+|||+++++|++++|+.||++|+++++|+.+++++... .
T Consensus       265 ~~~~~~~~~d~L~~~~~~~~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~  343 (497)
T KOG0157|consen  265 GSGEEKKRLDFLDTLLLEED-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKW  343 (497)
T ss_pred             CCcccchhhhHHHHHHHhcc-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCC
Confidence            32   245788886433333 679999999999999999999999999999999999999999999999999985332 2


Q ss_pred             CccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeec-cEEeCCCCEEEechhhhccCCCCCC-CCCCCCCCCccCC
Q 011093          339 EESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEIT-GFIIPKGAQVLVNAWAIGRDTSTWD-DPYSFKPERFLGS  416 (494)
Q Consensus       339 ~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~p~R~l~~  416 (494)
                      +....++|+||++||+|||||+|++|+ ..|.+.+|++++ ||.||||+.|.++++++|||+++|+ ||++|||+||+++
T Consensus       344 ~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~  422 (497)
T KOG0157|consen  344 EVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDG  422 (497)
T ss_pred             ChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCC
Confidence            333333699999999999999999998 569999999995 8999999999999999999999996 9999999999975


Q ss_pred             CCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093          417 DVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA  493 (494)
Q Consensus       417 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      ......++++|+|||+|+|.|+|++||++|+|+++++++++|+|++..+.   .  ......++.++++++.++.++
T Consensus       423 ~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~---~--~~~~~~~~l~~~~gl~v~~~~  494 (497)
T KOG0157|consen  423 EEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD---K--PKPVPELTLRPKNGLKVKLRP  494 (497)
T ss_pred             CCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC---C--ceeeeEEEEEecCCeEEEEEe
Confidence            43334456899999999999999999999999999999999999987762   1  333467788899998888765


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.2e-73  Score=554.33  Aligned_cols=465  Identities=27%  Similarity=0.468  Sum_probs=348.4

Q ss_pred             CCCCCCCCCCCCCCcccccccCC-CCCc-HHHHHHHHhh-CCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc
Q 011093           26 KGSRKLPPGPTPLPIIGNLLELG-HKPH-KSLAELAKVH-GPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE  102 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~~-~~~~-~~~~~~~~ky-G~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  102 (494)
                      ++..+.||||+++|++||++.+. +++. .++.++.++| |+||++++|++++|+|+||+.+++++.+++..|..++...
T Consensus        36 ~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~  115 (534)
T PLN03018         36 DRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLS  115 (534)
T ss_pred             CCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCch
Confidence            33445799999999999998873 3333 4677777777 7999999999999999999999999998888888876544


Q ss_pred             cccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093          103 SVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL  182 (494)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~  182 (494)
                      ....+..++.++.+..+|+.|+.+|+.+++..++......+.+..+.+++.+++.+.+..+.++++|+.+.+..+++|++
T Consensus       116 ~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  195 (534)
T PLN03018        116 IMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVT  195 (534)
T ss_pred             hhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHH
Confidence            43333222234556667999999999998434455555555666667788999998764445567999999999999999


Q ss_pred             HHHHhcccccccC------cchHHHHHHHHHHHHH---HhcCCCcccccc-ccccCChhhHHHHHHHHHHHHHHHHHHHH
Q 011093          183 SNSIFSVDLADAN------SDSAREFKDSMWGLMV---EAGRPNLSDFFP-MLRKLDIQGVRRRLTRHYIKILEVLDRFI  252 (494)
Q Consensus       183 ~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  252 (494)
                      ++++||.++...+      ......+...+.....   ........+.+| ++......+...+.......+.+++++.+
T Consensus       196 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  275 (534)
T PLN03018        196 MRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPII  275 (534)
T ss_pred             HHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            9999999875321      1111112212222111   111111122233 33321112223344445666778888888


Q ss_pred             HHHHHHHhhc-CCCCchhHHHHHhccccC-C--CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHH
Q 011093          253 DQRLEQRQEH-GFADSKDMLDTLLNISES-E--EIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLEL  328 (494)
Q Consensus       253 ~~~~~~~~~~-~~~~~~d~~~~ll~~~~~-~--~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  328 (494)
                      +++++..+.. +.....|+++.|++..++ +  .++++++.+++.++++||+|||+++++|++++|+.||++|+++++||
T Consensus       276 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei  355 (534)
T PLN03018        276 DERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKEL  355 (534)
T ss_pred             HHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            8877653312 211246899999976543 2  38999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCC
Q 011093          329 EQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF  408 (494)
Q Consensus       329 ~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  408 (494)
                      +++++.+..++.+++.+||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       356 ~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F  435 (534)
T PLN03018        356 DEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVY  435 (534)
T ss_pred             HHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCcccc
Confidence            99998777789999999999999999999999999987679999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCC-----CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccccccccc-
Q 011093          409 KPERFLGSDVDV-----KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQ-  482 (494)
Q Consensus       409 ~p~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~-  482 (494)
                      +|+||++.+++.     ......|+|||.|+|.|+|++||.+|+++++++|+++|+|++.++.  .+++.....+.+.. 
T Consensus       436 ~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~p  513 (534)
T PLN03018        436 EPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLMA  513 (534)
T ss_pred             CCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceecC
Confidence            999999654321     1234579999999999999999999999999999999999986652  13333333233333 


Q ss_pred             CCCCeeEeee
Q 011093          483 KAQPLRVVPV  492 (494)
Q Consensus       483 ~~~~~~~~~~  492 (494)
                      ....+.+++|
T Consensus       514 ~~~~v~~~~R  523 (534)
T PLN03018        514 KPLLLSVEPR  523 (534)
T ss_pred             CCeEEEEEec
Confidence            3344555554


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.8e-74  Score=564.69  Aligned_cols=447  Identities=22%  Similarity=0.344  Sum_probs=346.7

Q ss_pred             CCCCCCCCCCCCcccccccCC-------------------CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHH
Q 011093           28 SRKLPPGPTPLPIIGNLLELG-------------------HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVL   88 (494)
Q Consensus        28 ~~~~pp~p~~~p~lG~~~~~~-------------------~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~   88 (494)
                      ..+.||||+++|++||++.+.                   .+....+.+|+++||++|++++|+.++|+|+||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            456799999999999987663                   2233457889999999999999999999999999999999


Q ss_pred             HhcCcccCCCCCcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCC-Cc
Q 011093           89 QDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTG-EP  167 (494)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~  167 (494)
                      .++. .+..++...........+.+ ++..+|+.|+++|+.++ +.|+..+++.+.+.+.++++.+++.+.+..+.+ .+
T Consensus       120 ~~~~-~~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYN-TVTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCC-CCCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            8763 33333321111110111344 45567999999999998 889999999999999999999999997654333 57


Q ss_pred             eehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHH
Q 011093          168 IDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEV  247 (494)
Q Consensus       168 vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  247 (494)
                      +|+.+++..+++|++++++||.++...     .++.+.+..+............+|++..++ .+..++..+..+.+.++
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~  270 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKG-----KQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERL  270 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccc-----hHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHH
Confidence            999999999999999999999987532     122222222221111111111234433331 22334455667778888


Q ss_pred             HHHHHHHHHHHHhhcC-CCCchhHHHHHhccccC-----CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHH
Q 011093          248 LDRFIDQRLEQRQEHG-FADSKDMLDTLLNISES-----EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEAL  321 (494)
Q Consensus       248 ~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~-----~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~  321 (494)
                      +.+.++++++..+.+. .....|+++.+++...+     ..++++++.+++.++++||+|||+++++|++++|++||++|
T Consensus       271 ~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq  350 (516)
T PLN02290        271 LMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQ  350 (516)
T ss_pred             HHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHH
Confidence            8888888876543221 11346999999975431     24789999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCC
Q 011093          322 SKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTST  401 (494)
Q Consensus       322 ~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~  401 (494)
                      +++++|++++++++ .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++
T Consensus       351 ~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~  428 (516)
T PLN02290        351 DKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEEL  428 (516)
T ss_pred             HHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhh
Confidence            99999999999864 78999999999999999999999999986 68999999999999999999999999999999999


Q ss_pred             C-CCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccccccc
Q 011093          402 W-DDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGIT  480 (494)
Q Consensus       402 ~-~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  480 (494)
                      | +||++|+||||++.+.   .....|+|||.|+|.|+|++||++|++++++.|+++|++++.++.   +  ......++
T Consensus       429 ~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~---~--~~~~~~~~  500 (516)
T PLN02290        429 WGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY---R--HAPVVVLT  500 (516)
T ss_pred             hCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc---c--cCccceee
Confidence            9 8999999999995321   123479999999999999999999999999999999999987652   1  11122466


Q ss_pred             ccCCCCeeEeeee
Q 011093          481 LQKAQPLRVVPVA  493 (494)
Q Consensus       481 ~~~~~~~~~~~~~  493 (494)
                      ..|..++.++.++
T Consensus       501 ~~p~~~~~~~~~~  513 (516)
T PLN02290        501 IKPKYGVQVCLKP  513 (516)
T ss_pred             ecCCCCCeEEEEe
Confidence            7777776666543


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.3e-74  Score=559.77  Aligned_cols=439  Identities=22%  Similarity=0.310  Sum_probs=338.7

Q ss_pred             cCCCCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCC
Q 011093           25 SKGSRKLPPGPTPLPIIGNLLELG-----HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRN   99 (494)
Q Consensus        25 ~~~~~~~pp~p~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~   99 (494)
                      .+++.+.||||+++|++||++.+.     +.+++++.+++++||++|++++|++++|+|+||+++++++.+++..|..+.
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            355667899999999999976441     356778999999999999999999999999999999999987766664332


Q ss_pred             CcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhh-cHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHH
Q 011093          100 VPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDA-NQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTV  178 (494)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~  178 (494)
                      ... .....  +.+.++..+|+.|+++|+.++ +.|++.+++. +.+.+.+.+..+++.|.    .++++|+.+.+..++
T Consensus       113 ~~~-~~~~~--g~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~  184 (490)
T PLN02500        113 PRS-IGGIL--GKWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKFT  184 (490)
T ss_pred             chH-HHHHh--CcccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHHH
Confidence            111 11111  222234557999999999998 8899988876 45666677777766663    345799999999999


Q ss_pred             HHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          179 VNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQ  258 (494)
Q Consensus       179 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (494)
                      +|++++++||.+.+..   ...++.+.+..+......  ....+|...       .++..+..+.+.+++.+.+++++++
T Consensus       185 ~~vi~~~~fg~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~p~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~  252 (490)
T PLN02500        185 FNLMAKHIMSMDPGEE---ETEQLKKEYVTFMKGVVS--APLNFPGTA-------YRKALKSRATILKFIERKMEERIEK  252 (490)
T ss_pred             HHHHHHHHhCCCCCch---HHHHHHHHHHHHHhhhhc--chhcCCCcc-------cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999875432   123333333333322111  001122211       1344456677888888888887765


Q ss_pred             HhhcCC-CCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC----
Q 011093          259 RQEHGF-ADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG----  333 (494)
Q Consensus       259 ~~~~~~-~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~----  333 (494)
                      .+++.. ....|+++.+++.   ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++    
T Consensus       253 ~~~~~~~~~~~d~l~~ll~~---~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~  329 (490)
T PLN02500        253 LKEEDESVEEDDLLGWVLKH---SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQ  329 (490)
T ss_pred             hhcccCCCCcchHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcccc
Confidence            432211 1346899999975   35899999999999999999999999999999999999999999999999863    


Q ss_pred             -CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCC
Q 011093          334 -KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPER  412 (494)
Q Consensus       334 -~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R  412 (494)
                       ++..++.+++++|||++|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|||
T Consensus       330 ~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeR  408 (490)
T PLN02500        330 SGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWR  408 (490)
T ss_pred             CCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhh
Confidence             23457999999999999999999999999998 5799999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCC------CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCC
Q 011093          413 FLGSDVDVK------GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQP  486 (494)
Q Consensus       413 ~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (494)
                      |++++.+.+      ..++.|+|||.|+|.|+|++||.+|+++++++|+++|+|++.++.   . ...  ...+.. ..+
T Consensus       409 fl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~---~-~~~--~~~~~~-~~~  481 (490)
T PLN02500        409 WQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD---Q-AFA--FPFVDF-PKG  481 (490)
T ss_pred             ccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC---c-cee--cccccC-CCC
Confidence            997542211      134579999999999999999999999999999999999987652   1 111  112222 358


Q ss_pred             eeEeeeeC
Q 011093          487 LRVVPVAI  494 (494)
Q Consensus       487 ~~~~~~~~  494 (494)
                      +.++.++|
T Consensus       482 l~~~~~~~  489 (490)
T PLN02500        482 LPIRVRRI  489 (490)
T ss_pred             ceEEEEeC
Confidence            88888765


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.6e-73  Score=513.62  Aligned_cols=451  Identities=26%  Similarity=0.408  Sum_probs=373.9

Q ss_pred             CCCCCCCCCCCCCcccccccC----CCCCcHHHHHHHHhhCCceEEe-cCCeeEEEeCCHHHHHHHHHhcCcccCCCC-C
Q 011093           27 GSRKLPPGPTPLPIIGNLLEL----GHKPHKSLAELAKVHGPIMSLK-FGQVTTVVISSATMAKQVLQDHDKSLCNRN-V  100 (494)
Q Consensus        27 ~~~~~pp~p~~~p~lG~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~  100 (494)
                      ++....|+|+++|++|.+...    ..+.++.....+++|||||+.. +|+...|.|.||++++.++++.+ .++.++ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccc
Confidence            345668999999999998833    2567889999999999999999 88899999999999999998654 446563 2


Q ss_pred             cccc---cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhcc---CCCceehhHHH
Q 011093          101 PESV---GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCR---TGEPIDVGQAA  174 (494)
Q Consensus       101 ~~~~---~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~vd~~~~~  174 (494)
                      ...+   +.. .++...++..+|++|++.|..+++..++++.++.+.+.+++.+++++..+....+   +..+.|+.+.+
T Consensus       126 ~~~w~~~rd~-~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l  204 (519)
T KOG0159|consen  126 IEPWVAYRDF-RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQEL  204 (519)
T ss_pred             cchhhhhHHh-hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence            2111   122 2233445778899999999999988899999999999999999999999987644   33578999999


Q ss_pred             HHHHHHHHHHHHhcccccccC---cchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHH
Q 011093          175 FDTVVNLLSNSIFSVDLADAN---SDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRF  251 (494)
Q Consensus       175 ~~~~~~~~~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (494)
                      ++++++.++.++||.+++...   +++...+.+++..++.......+  ..++++.+ .++.+++..++.+.+.++.+++
T Consensus       205 ~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~--~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~  281 (519)
T KOG0159|consen  205 YRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLML--MPSLWRYF-PTKVWKDFVRAWDQIFDVGDKY  281 (519)
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHh--cchHHHhC-CChHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998654   35678899999888876654222  12444444 5566788899999999999999


Q ss_pred             HHHHHHHHhhcCCC---CchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHH
Q 011093          252 IDQRLEQRQEHGFA---DSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLEL  328 (494)
Q Consensus       252 i~~~~~~~~~~~~~---~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  328 (494)
                      |++..++.+.+...   ....+...|.+    +.++.+++..+++.+++||.|||++++.|+||.|++||++|++|++|+
T Consensus       282 Id~~l~~l~~~~~~~~~~~~~l~~~L~~----~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei  357 (519)
T KOG0159|consen  282 IDNALEELEKQDSAGSEYTGSLLELLLR----KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEI  357 (519)
T ss_pred             HHHHHHHHHhccccccchhHHHHHHHHH----ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            99999988754331   12233333333    569999999999999999999999999999999999999999999999


Q ss_pred             HHhhCC-CCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCC
Q 011093          329 EQKVGK-GNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYS  407 (494)
Q Consensus       329 ~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  407 (494)
                      .+++.. +..++.+++.+||||.||||||+||+|.+++ ..|...+|.+++||.|||||.|.++.+.+.+||++|++|++
T Consensus       358 ~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  358 LAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             HhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            999987 5778999999999999999999999999998 56999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCe
Q 011093          408 FKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPL  487 (494)
Q Consensus       408 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  487 (494)
                      |.|+|||+++. ...++..++|||.|+|+|+||++|.+|+.++|++++++|+++..++   .++..  ...++..|..++
T Consensus       437 F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~---~pv~~--~~~~il~P~~~l  510 (519)
T KOG0159|consen  437 FLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE---EPVEY--VYRFILVPNRPL  510 (519)
T ss_pred             cChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC---CCccc--eeEEEEcCCCCc
Confidence            99999998763 2346678999999999999999999999999999999999998764   23343  455566666676


Q ss_pred             eEeeee
Q 011093          488 RVVPVA  493 (494)
Q Consensus       488 ~~~~~~  493 (494)
                      .++.++
T Consensus       511 ~f~f~~  516 (519)
T KOG0159|consen  511 RFKFRP  516 (519)
T ss_pred             ceeeee
Confidence            666554


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.4e-73  Score=548.05  Aligned_cols=431  Identities=20%  Similarity=0.279  Sum_probs=336.6

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccc
Q 011093           26 KGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVG  105 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  105 (494)
                      +...+.||||+++|++||++.+.+++..++.+++++||++|++++|++++++|+||+++++|+.++...+..+.......
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            34456789999999999998876678889999999999999999999999999999999999987766554332211111


Q ss_pred             ccccCCCCcccccCChhHHHHHHHhhhccCChhHHhh-cHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHH
Q 011093          106 SIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDA-NQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSN  184 (494)
Q Consensus       106 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~  184 (494)
                       . . +.+.++..+|+.|+.+|+.+. +.|++..++. +.+.+.+.+++++++|.    .++++|+.+.+..+++++++.
T Consensus       107 -~-l-g~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        107 -I-L-GTCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             -H-h-CccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHH
Confidence             1 1 223345568999999999997 8899988875 67888888888877764    345799999999999999999


Q ss_pred             HHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011093          185 SIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGF  264 (494)
Q Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  264 (494)
                      ++||.+....    ..++.+.+..+..  ...    .+|.  .++.. ..++..+..+.+.+++.+.++++.+.    +.
T Consensus       179 ~~~g~~~~~~----~~~~~~~~~~~~~--~~~----~~~~--~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~----~~  241 (463)
T PLN02774        179 QIAGTLSKPI----SEEFKTEFFKLVL--GTL----SLPI--DLPGT-NYRSGVQARKNIVRMLRQLIQERRAS----GE  241 (463)
T ss_pred             HHcCCCChHH----HHHHHHHHHHHhc--ccc----cCCc--CCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence            9999764321    1233333333211  110    1121  11111 12344556677777788877776543    22


Q ss_pred             CCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCC---CCCCCc
Q 011093          265 ADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGK---GNLIEE  340 (494)
Q Consensus       265 ~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~  340 (494)
                       ...|+++.|++...+ ..++++|+.+++.++++||+|||+++++|++++|++||++|+++++|++++++.   +..+++
T Consensus       242 -~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~  320 (463)
T PLN02774        242 -THTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDW  320 (463)
T ss_pred             -CcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCH
Confidence             346999999974433 358999999999999999999999999999999999999999999999999863   346789


Q ss_pred             cccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCC
Q 011093          341 SDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDV  420 (494)
Q Consensus       341 ~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~  420 (494)
                      +++++||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.+.  
T Consensus       321 ~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~--  397 (463)
T PLN02774        321 NDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL--  397 (463)
T ss_pred             HHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc--
Confidence            9999999999999999999999986 5699999999999999999999999999999999999999999999996432  


Q ss_pred             CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093          421 KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA  493 (494)
Q Consensus       421 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      +.+ ..|+|||+|+|.|+|++||.+|++++++.|+++|+|++.++.   +. .  . ..+..|+.++.++..+
T Consensus       398 ~~~-~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~---~~-~--~-~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        398 ESH-NYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGD---KL-M--K-FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             CCC-ccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCC---cc-c--c-CCCCCCCCCceEEeee
Confidence            112 269999999999999999999999999999999999997652   11 1  1 1133366777777654


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.2e-74  Score=565.01  Aligned_cols=429  Identities=33%  Similarity=0.579  Sum_probs=357.2

Q ss_pred             CCCCCCCCcccccccCC--CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccc--c
Q 011093           32 PPGPTPLPIIGNLLELG--HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGS--I  107 (494)
Q Consensus        32 pp~p~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  107 (494)
                      ||||+++|++||++++.  +++++++.+++++||+||+++++++++++|+||+.+++|+.+++..+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999985  6788999999999999999999999999999999999999987766665433222221  1


Q ss_pred             ccCCCCcccccCChhHHHHHHHhhhccCChh-HHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHH
Q 011093          108 QKDEYGIPWLPVSTKWKKLRKICNLHIFTSQ-KLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSI  186 (494)
Q Consensus       108 ~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~  186 (494)
                      ...+.++ +..+|+.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.|.+....++.+|+.+++..+++|+++.++
T Consensus        81 ~~~~~~l-~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGL-FFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSS-TTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-cccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1224444 5556799999999998 777777 66 899999999999999998865555579999999999999999999


Q ss_pred             hcccccccCcchHHHHHHHHHHHHHHhcC--CCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011093          187 FSVDLADANSDSAREFKDSMWGLMVEAGR--PNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGF  264 (494)
Q Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  264 (494)
                      ||.+++..++....++.+.+..+......  ..+...+|++..+ .....+...+..+.+.+++.+.++++.++......
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  236 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDDGDE  236 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSS
T ss_pred             ccceeeeccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence            99998755544445666666666543322  1233456655544 33445566667788888888998888887663312


Q ss_pred             CCchhHHHHHhccc--cC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCc
Q 011093          265 ADSKDMLDTLLNIS--ES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEE  340 (494)
Q Consensus       265 ~~~~d~~~~ll~~~--~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  340 (494)
                       ...|+++.+++..  .+  ..++++++..+++.+++||+|||+.+++|++++|++||++|++|++||+++.+++..++.
T Consensus       237 -~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~  315 (463)
T PF00067_consen  237 -SRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITF  315 (463)
T ss_dssp             -SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHH
T ss_pred             -ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             5679999999986  22  379999999999999999999999999999999999999999999999999977778899


Q ss_pred             cccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCC
Q 011093          341 SDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDV  420 (494)
Q Consensus       341 ~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~  420 (494)
                      +++++||||+|||+||||++|+++..++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||++.+...
T Consensus       316 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~  395 (463)
T PF00067_consen  316 EDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGIS  395 (463)
T ss_dssp             HHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999966789999999999999999999999999999999999999999999999876522


Q ss_pred             CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCC
Q 011093          421 KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNE  465 (494)
Q Consensus       421 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  465 (494)
                      ......|+|||.|+|.|+|++||++|+++++++||++|||++.++
T Consensus       396 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~  440 (463)
T PF00067_consen  396 NRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPG  440 (463)
T ss_dssp             CSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTT
T ss_pred             ccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCC
Confidence            345568999999999999999999999999999999999999765


No 21 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-72  Score=491.77  Aligned_cols=440  Identities=24%  Similarity=0.352  Sum_probs=351.1

Q ss_pred             CCCCCCCCC-CCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccc
Q 011093           28 SRKLPPGPT-PLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGS  106 (494)
Q Consensus        28 ~~~~pp~p~-~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~  106 (494)
                      +++.||.-. |+||+|++..|+++|.+|++++++|||+||++.++|+.+.++.+|+....++......++....+.....
T Consensus        29 ~~~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~  108 (486)
T KOG0684|consen   29 SRKEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTT  108 (486)
T ss_pred             CCCCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhh
Confidence            334666666 5999999999999999999999999999999999999999999999999999866444443332211111


Q ss_pred             cccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHH-HHHhccCCCceehhHHHHHHHHHHHHHH
Q 011093          107 IQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTF-VQESCRTGEPIDVGQAAFDTVVNLLSNS  185 (494)
Q Consensus       107 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~vd~~~~~~~~~~~~~~~~  185 (494)
                      - ..|+|+.....+....++.+.+. ..+....++++.+.+.+++++.+.. +.+   +|..-.+.++.+.+.+.+.-.+
T Consensus       109 ~-vFg~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~l  183 (486)
T KOG0684|consen  109 P-VFGKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLL  183 (486)
T ss_pred             h-hcCCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHh
Confidence            1 12566766666777788888887 7788999999999999999888877 433   5666678888888999988888


Q ss_pred             HhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011093          186 IFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFA  265 (494)
Q Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (494)
                      +||......+.+. ..+...+.+-+.     .+...||.  +++....+ +..++.+.+.+.+...+.++++..+    +
T Consensus       184 l~~e~r~~~d~~~-a~l~~dLd~~F~-----~~d~~FP~--~LP~~~~r-~~~ra~~~i~k~f~~~i~~rr~s~s----~  250 (486)
T KOG0684|consen  184 LGGEVRDQLDADV-AKLYHDLDQGFQ-----PFDFLFPY--NLPIPLLR-RRDRARKKISKIFSKIILDRRASIS----K  250 (486)
T ss_pred             hhhhhhhhhcchH-HHHHHHHhcccc-----chHhhccc--CCCcchhh-hHHHHHHHHHHHHHHHHHHHHhccc----c
Confidence            8888876644322 222222222111     22334563  33233333 3347778888888888888777532    2


Q ss_pred             CchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCC-CCcccc
Q 011093          266 DSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNL-IEESDI  343 (494)
Q Consensus       266 ~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~  343 (494)
                      ..+|+++.+++..++ .+.+++|+.+..+.++|||++||++|.+|++++|++|||+++++++|+++++|.... ++.+.+
T Consensus       251 ~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L  330 (486)
T KOG0684|consen  251 WDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQL  330 (486)
T ss_pred             ccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHH
Confidence            567999999985443 678999999999999999999999999999999999999999999999999987554 899999


Q ss_pred             CCChhHHHHHHHHhhcCCCCCCcCccccccceeecc----EEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCC
Q 011093          344 TQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITG----FIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVD  419 (494)
Q Consensus       344 ~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~  419 (494)
                      ++||+|++||+|||||+||.+..+ |.+.+|.++.+    |.||+|..|.++++.+|+||++|+||+.|+|+||++++++
T Consensus       331 ~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~  409 (486)
T KOG0684|consen  331 KDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGE  409 (486)
T ss_pred             hcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcc
Confidence            999999999999999999888754 99999999976    9999999999999999999999999999999999987765


Q ss_pred             CC--CC--ccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEe
Q 011093          420 VK--GR--NFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVV  490 (494)
Q Consensus       420 ~~--~~--~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (494)
                      .+  +.  .+.++|||+|.|.|||+.||.+|+|+++..+|++||+++.+++ ..++|+   ..+++.|..++.|+
T Consensus       410 ~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~-~P~~d~---s~~v~~P~g~v~ir  480 (486)
T KOG0684|consen  410 SKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP-FPEVDY---SRMVMQPEGDVRIR  480 (486)
T ss_pred             cccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC-CCCCCH---HHhhcCCCCCceEE
Confidence            42  22  2457999999999999999999999999999999999999862 233444   34578888888887


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.3e-71  Score=538.27  Aligned_cols=444  Identities=21%  Similarity=0.307  Sum_probs=333.0

Q ss_pred             CCCCCCCCCCcccccccCCCCCcH---HHHHHHHhhCCceE---EecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccc
Q 011093           30 KLPPGPTPLPIIGNLLELGHKPHK---SLAELAKVHGPIMS---LKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPES  103 (494)
Q Consensus        30 ~~pp~p~~~p~lG~~~~~~~~~~~---~~~~~~~kyG~v~~---~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  103 (494)
                      +..|+|+++|++|++..+..+...   ++.+...+||..++   .|+|+.++++|+||+.+++|+.++...|.++.....
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            356889999999999766433333   33333344886665   678999999999999999999887666666543222


Q ss_pred             ccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhc--HHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHH
Q 011093          104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDAN--QDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNL  181 (494)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~  181 (494)
                      ....  .|.|+ +..+|+.|+++||+++ +.|+...+..+  .+.+.+.++.+++.+.+...+++++|+.+.+..+++|+
T Consensus       111 ~~~~--~g~gl-~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        111 IFDV--LGEGI-LTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             HHHh--hcCcc-cccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence            2221  24555 4557999999999998 99998877643  35666777888888876545567899999999999999


Q ss_pred             HHHHHhcccccccCcc-hHHHHHHHHHHHHHHhcCCCccccccccc-----cCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          182 LSNSIFSVDLADANSD-SAREFKDSMWGLMVEAGRPNLSDFFPMLR-----KLDIQGVRRRLTRHYIKILEVLDRFIDQR  255 (494)
Q Consensus       182 ~~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (494)
                      +++++||.+.+..+.. ...++.+.+.........   ..+.|++.     ++ ..+..++..+..+.+.+++.+.|+++
T Consensus       187 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~r  262 (500)
T PLN02169        187 SSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWI-GIGLERKMRTALATVNRMFAKIISSR  262 (500)
T ss_pred             HHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987543211 112344333332211111   01122211     11 12234556778888889999999888


Q ss_pred             HHHHhhc--CCCCchhHHHHHhccccC-----CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHH
Q 011093          256 LEQRQEH--GFADSKDMLDTLLNISES-----EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLEL  328 (494)
Q Consensus       256 ~~~~~~~--~~~~~~d~~~~ll~~~~~-----~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  328 (494)
                      +++..+.  .++...|+++.+++...+     ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||
T Consensus       263 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei  342 (500)
T PLN02169        263 RKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEI  342 (500)
T ss_pred             HHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence            7642211  111236899999986431     247899999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCcccccccee-eccEEeCCCCEEEechhhhccCCCCC-CCCC
Q 011093          329 EQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVE-ITGFIIPKGAQVLVNAWAIGRDTSTW-DDPY  406 (494)
Q Consensus       329 ~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~-~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~  406 (494)
                      ++++      +.+++.+||||+||++|||||+|++|... |.+.+|.+ ++||.||||+.|.++++++||||++| +||+
T Consensus       343 ~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~  415 (500)
T PLN02169        343 NTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDAL  415 (500)
T ss_pred             HhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChh
Confidence            8864      57899999999999999999999999864 76666655 59999999999999999999999999 8999


Q ss_pred             CCCCCCccCCCCCCC-CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCC
Q 011093          407 SFKPERFLGSDVDVK-GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQ  485 (494)
Q Consensus       407 ~F~p~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (494)
                      +|+||||++++++.. ...+.|+|||+|+|.|+|++||++|+++++++||++|+|++.++   ..+  ....++++.++.
T Consensus       416 ~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~---~~~--~~~~~~~l~~~~  490 (500)
T PLN02169        416 DFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEG---HKI--EAIPSILLRMKH  490 (500)
T ss_pred             hcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCC---CCc--ccccceEEecCC
Confidence            999999997544322 23568999999999999999999999999999999999998754   222  223456777888


Q ss_pred             CeeEeeee
Q 011093          486 PLRVVPVA  493 (494)
Q Consensus       486 ~~~~~~~~  493 (494)
                      ++.++.++
T Consensus       491 gl~l~l~~  498 (500)
T PLN02169        491 GLKVTVTK  498 (500)
T ss_pred             CEEEEEEe
Confidence            87777654


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.7e-71  Score=534.75  Aligned_cols=449  Identities=21%  Similarity=0.295  Sum_probs=348.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCH
Q 011093            3 ILISCVLWLLFTWVWVITLRSFSKGSRKLPPGPTPLPIIGNLLEL-GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSA   81 (494)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~p~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp   81 (494)
                      ..+++.++++++|.....+.....+..+.||||+++|++|+++.+ ..+++.++.+++++||++|++++++.++|+|+||
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p   87 (463)
T PLN02196          8 LTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSP   87 (463)
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCH
Confidence            344444444555554444443444556778999999999998775 5789999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHh
Q 011093           82 TMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQES  161 (494)
Q Consensus        82 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~  161 (494)
                      +++++++.++...+..  .......... +...++..+|+.|+++|+++. +.|++++++.+.+.+.+.++++++.|.  
T Consensus        88 ~~~~~vl~~~~~~~~~--~~~~~~~~~~-g~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~--  161 (463)
T PLN02196         88 EAAKFVLVTKSHLFKP--TFPASKERML-GKQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE--  161 (463)
T ss_pred             HHHHHHHhCCCCcccc--cCchHHHHHc-CcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC--
Confidence            9999999877665532  1111111111 333445678999999999998 889999999999999999998888773  


Q ss_pred             ccCCCceehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHH
Q 011093          162 CRTGEPIDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHY  241 (494)
Q Consensus       162 ~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  241 (494)
                         ++++|+.+++..+++++++.++||.+....    ...+.+.+.....      ....+|+...   ....++..++.
T Consensus       162 ---~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~----~~~~~~~~~~~~~------~~~~~~~~~p---~~~~~~~~~a~  225 (463)
T PLN02196        162 ---GTQINTYQEMKTYTFNVALLSIFGKDEVLY----REDLKRCYYILEK------GYNSMPINLP---GTLFHKSMKAR  225 (463)
T ss_pred             ---CCeEEeHHHHHHHHHHHHHHHHcCCCCchH----HHHHHHHHHHHhc------chhcccccCC---CccchHHHHHH
Confidence               357999999999999999999999875321    1222222221110      0111232111   11123455666


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHH
Q 011093          242 IKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEAL  321 (494)
Q Consensus       242 ~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~  321 (494)
                      +.+.+++.+.++++.++    .. +..|+++.+++.  ..+++++++.++++++++||+|||+++++|++++|++||++|
T Consensus       226 ~~~~~~~~~~i~~~~~~----~~-~~~d~l~~ll~~--~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq  298 (463)
T PLN02196        226 KELAQILAKILSKRRQN----GS-SHNDLLGSFMGD--KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVL  298 (463)
T ss_pred             HHHHHHHHHHHHHHhhc----CC-CcccHHHHHHhc--CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHH
Confidence            77778888887766543    11 346899999863  256899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCC---CCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccC
Q 011093          322 SKARLELEQKVGK---GNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRD  398 (494)
Q Consensus       322 ~~l~~Ei~~~~~~---~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d  398 (494)
                      +++++|++++.+.   +..++.+++++||||+|||+|+||++|++++. .|.+.+|++++||.||||+.|+++.+++|||
T Consensus       299 ~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd  377 (463)
T PLN02196        299 EAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHS  377 (463)
T ss_pred             HHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCC
Confidence            9999999998864   34578899999999999999999999999985 5999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccccc
Q 011093          399 TSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFG  478 (494)
Q Consensus       399 ~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  478 (494)
                      |++|+||++|+||||++..     .+..|+|||.|+|.|+|++||++|++++++.|+++|+|++.++.    .+.  ...
T Consensus       378 ~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~----~~~--~~~  446 (463)
T PLN02196        378 ADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS----NGI--QYG  446 (463)
T ss_pred             chhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC----Cce--EEc
Confidence            9999999999999998632     23579999999999999999999999999999999999987542    122  223


Q ss_pred             ccccCCCCeeEeee
Q 011093          479 ITLQKAQPLRVVPV  492 (494)
Q Consensus       479 ~~~~~~~~~~~~~~  492 (494)
                      .+..|+.++.|+.+
T Consensus       447 ~~~~p~~~~~~~~~  460 (463)
T PLN02196        447 PFALPQNGLPIALS  460 (463)
T ss_pred             ccccCCCCceEEEe
Confidence            34457778777754


No 24 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.4e-71  Score=543.69  Aligned_cols=451  Identities=22%  Similarity=0.314  Sum_probs=336.1

Q ss_pred             CCCCCCCCCcccccccCCCCCcHHHHHHHHhh---CCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-cccc
Q 011093           31 LPPGPTPLPIIGNLLELGHKPHKSLAELAKVH---GPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-SVGS  106 (494)
Q Consensus        31 ~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~ky---G~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~~  106 (494)
                      .+|||+++|++||++.+..+ +..+.+|.++|   |++|++++|+.++++++||+.+++|+.++...+.+..... ....
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~  109 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV  109 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence            47899999999998765433 34567777888   8999999999999999999999999986544554432211 1111


Q ss_pred             cccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHH-HHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHH
Q 011093          107 IQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLR-RKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNS  185 (494)
Q Consensus       107 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~  185 (494)
                      .  .+.+ +++.+|+.|+++||.++ +.|+..+++.+.+.+ .+.++.+++.+.+...+++++|+.+++..+++|+++.+
T Consensus       110 ~--~g~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        110 L--LGDG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             H--hcCe-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence            1  1344 45578999999999998 889999999988875 66677888777654345678999999999999999999


Q ss_pred             HhcccccccCcc-hHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Q 011093          186 IFSVDLADANSD-SAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEH--  262 (494)
Q Consensus       186 ~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--  262 (494)
                      +||.+++..+.. ....+.+.+.......... ....++.+.........++..+....+.+++.+.+++++++..+.  
T Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  264 (516)
T PLN03195        186 GFGVEIGTLSPSLPENPFAQAFDTANIIVTLR-FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARK  264 (516)
T ss_pred             HhCCCccccccCCCccHHHHHHHHHHHHHHHH-HhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            999988654321 1123444333322111000 000011111110111223445566777788888888777653211  


Q ss_pred             -CCCCchhHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCC-----
Q 011093          263 -GFADSKDMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGK-----  334 (494)
Q Consensus       263 -~~~~~~d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-----  334 (494)
                       .+....|+++.|++..++  ..++++++.++++++++||+|||+++++|++++|++||++|++|++|+++++++     
T Consensus       265 ~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~  344 (516)
T PLN03195        265 SGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEE  344 (516)
T ss_pred             ccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccc
Confidence             111346899999976433  459999999999999999999999999999999999999999999999987642     


Q ss_pred             ---------------CCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceee-ccEEeCCCCEEEechhhhccC
Q 011093          335 ---------------GNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEI-TGFIIPKGAQVLVNAWAIGRD  398 (494)
Q Consensus       335 ---------------~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d  398 (494)
                                     +..++++++++||||+|||+||||++|+++.. +|.+.+|.++ +||.||||+.|.++.+++|||
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        345 DPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             cccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                           23578899999999999999999999999986 5767776665 999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccc
Q 011093          399 TSTW-DDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKF  477 (494)
Q Consensus       399 ~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  477 (494)
                      |++| +||++|+||||++++......++.|+|||+|+|.|+|++||++|++++++.|+++|++++.++   .+...  ..
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~---~~~~~--~~  498 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPG---HPVKY--RM  498 (516)
T ss_pred             hhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCC---Cccee--ee
Confidence            9999 999999999999643211224457999999999999999999999999999999999998654   22222  22


Q ss_pred             cccccCCCCeeEeeee
Q 011093          478 GITLQKAQPLRVVPVA  493 (494)
Q Consensus       478 ~~~~~~~~~~~~~~~~  493 (494)
                      ..+..+..++.++.++
T Consensus       499 ~~~~~~~~~~~v~~~~  514 (516)
T PLN03195        499 MTILSMANGLKVTVSR  514 (516)
T ss_pred             eeEEecCCCEEEEEEe
Confidence            3455677776666543


No 25 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.1e-70  Score=536.92  Aligned_cols=431  Identities=21%  Similarity=0.371  Sum_probs=326.0

Q ss_pred             CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHHH
Q 011093           48 GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLR  127 (494)
Q Consensus        48 ~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R  127 (494)
                      ++.++..+.+++++|||||++++|+.++++|+||+.+++|+.++...|.++.........  .+.++ +..+|+.|+.+|
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l-~~~dge~wr~rR  226 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGL-IPADGEIWRVRR  226 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCce-ecCCcHHHHHHH
Confidence            345678899999999999999999999999999999999998776666654322111111  13343 456799999999


Q ss_pred             HHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhcccccccCcc--hHHHHHHH
Q 011093          128 KICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFSVDLADANSD--SAREFKDS  205 (494)
Q Consensus       128 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~--~~~~~~~~  205 (494)
                      +.+. +.|+.+.+..+.+.+.+.++.+++++.+...+++++|+.+.+..+++|+++.++||.+++...++  ....+.+.
T Consensus       227 r~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~  305 (633)
T PLN02738        227 RAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTV  305 (633)
T ss_pred             Hhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHH
Confidence            9998 89999999999999999999999999876556789999999999999999999999998753221  12222222


Q ss_pred             HHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CCCCchhHHHHHhcc
Q 011093          206 MWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEH--------GFADSKDMLDTLLNI  277 (494)
Q Consensus       206 ~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~d~~~~ll~~  277 (494)
                      +...............+|.+..+  ....++..+..+.+...+.++++.+.+..++.        ......|+++.|++.
T Consensus       306 ~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~  383 (633)
T PLN02738        306 LREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLAS  383 (633)
T ss_pred             HHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHc
Confidence            22221111111000112222222  11123333444455555555555443321110        011345899999875


Q ss_pred             ccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHh
Q 011093          278 SESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETL  357 (494)
Q Consensus       278 ~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l  357 (494)
                      .  ..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++++++ +..++++++++||||+|||+|+|
T Consensus       384 ~--~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIkEtL  460 (633)
T PLN02738        384 G--DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESL  460 (633)
T ss_pred             C--CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHHHHH
Confidence            3  45899999999999999999999999999999999999999999999999988 45689999999999999999999


Q ss_pred             hcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCC--CCCCCccccccCCCCCC
Q 011093          358 RLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDV--DVKGRNFELIPFGAGRR  435 (494)
Q Consensus       358 Rl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~--~~~~~~~~~~~Fg~G~r  435 (494)
                      ||+|+++. .+|.+.+|++++||.||+||.|.++.+.+||||++|+||++|+||||+....  +.......|+|||.|+|
T Consensus       461 RL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R  539 (633)
T PLN02738        461 RLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPR  539 (633)
T ss_pred             hcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCC
Confidence            99999998 4599999999999999999999999999999999999999999999985321  11223457999999999


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093          436 ICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV  492 (494)
Q Consensus       436 ~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (494)
                      .|+|++||++|++++++.|+++|+|++.++.  .+...  ..+.+..+..++.++.+
T Consensus       540 ~CiG~~lA~~El~l~LA~Llr~F~~el~~~~--~~~~~--~~~~~~~p~~~l~v~l~  592 (633)
T PLN02738        540 KCVGDMFASFENVVATAMLVRRFDFQLAPGA--PPVKM--TTGATIHTTEGLKMTVT  592 (633)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC--CCccc--ccceEEeeCCCcEEEEE
Confidence            9999999999999999999999999997652  11222  22344555555555543


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.7e-70  Score=527.24  Aligned_cols=434  Identities=23%  Similarity=0.344  Sum_probs=336.7

Q ss_pred             cCCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCC
Q 011093           25 SKGSRKLPPGPTPLPIIGNLLEL-----GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRN   99 (494)
Q Consensus        25 ~~~~~~~pp~p~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~   99 (494)
                      ++++.+.||||.++|++|+++.+     ..+++.++.+++++||+||++++|++++|+|+||+++++++.+++..+..+.
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            46778889999999999999876     2468899999999999999999999999999999999999998776665442


Q ss_pred             CcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhh-cHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHH
Q 011093          100 VPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDA-NQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTV  178 (494)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~  178 (494)
                      .. ......  |.+.++..+|+.|+++|+++. +.|+..++.. ..+.+.+.+..+++.+    ..++++|+.+.+..++
T Consensus        82 ~~-~~~~l~--g~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  153 (452)
T PLN03141         82 PK-SLTELM--GKSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSW----RDDPPVLVQDETKKIA  153 (452)
T ss_pred             ch-hHHHHh--CcccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCEEhHHHHHHHH
Confidence            21 122221  333345668999999999998 7787766654 3445555555555444    2456899999999999


Q ss_pred             HHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          179 VNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQ  258 (494)
Q Consensus       179 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (494)
                      ++++++++||.+...    ...++.+.+..+.....      .+|..  ++... ..+..+..+.+.+++.+.++++++.
T Consensus       154 ~~vi~~~~~G~~~~~----~~~~~~~~~~~~~~~~~------~~~~~--~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        154 FEVLVKALISLEPGE----EMEFLKKEFQEFIKGLM------SLPIK--LPGTR-LYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHHHHcCCCchH----HHHHHHHHHHHHhhhHH------hCccC--CCchH-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999976532    12334444444332211      11211  11111 1334466788888999999888765


Q ss_pred             HhhcCC---CCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC--
Q 011093          259 RQEHGF---ADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG--  333 (494)
Q Consensus       259 ~~~~~~---~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~--  333 (494)
                      .+.+..   ....|+++.+++.. +..++++++..+++.+++||+|||+++++|++++|++||++|+++++|++++.+  
T Consensus       221 ~~~~~~~~~~~~~d~l~~ll~~~-~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~  299 (452)
T PLN03141        221 MKNKEEDETGIPKDVVDVLLRDG-SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLK  299 (452)
T ss_pred             HhccCccccCChhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhcc
Confidence            432211   01368999999864 346899999999999999999999999999999999999999999999988753  


Q ss_pred             --CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCC
Q 011093          334 --KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPE  411 (494)
Q Consensus       334 --~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~  411 (494)
                        .+..++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||
T Consensus       300 ~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~Pe  378 (452)
T PLN03141        300 ADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPW  378 (452)
T ss_pred             CCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcc
Confidence              23457889999999999999999999999975 679999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEee
Q 011093          412 RFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVP  491 (494)
Q Consensus       412 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (494)
                      ||++.+.    .+..|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++.   ..     ...++.|..++.++.
T Consensus       379 Rfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~-----~~~~~~~~~~~~~~~  446 (452)
T PLN03141        379 RWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV-----NFPTVRMKRKLPIWV  446 (452)
T ss_pred             cccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee-----ecccccCCCCceEEE
Confidence            9997532    24579999999999999999999999999999999999986542   11     123556666666655


Q ss_pred             ee
Q 011093          492 VA  493 (494)
Q Consensus       492 ~~  493 (494)
                      ++
T Consensus       447 ~~  448 (452)
T PLN03141        447 TR  448 (452)
T ss_pred             Ee
Confidence            44


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=7.7e-69  Score=523.77  Aligned_cols=414  Identities=22%  Similarity=0.330  Sum_probs=328.5

Q ss_pred             cCCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCC--ceEEecCCeeEEEeCCHHHHHHHHHhcCcccCC
Q 011093           25 SKGSRKLPPGPTPLPIIGNLLEL-----GHKPHKSLAELAKVHGP--IMSLKFGQVTTVVISSATMAKQVLQDHDKSLCN   97 (494)
Q Consensus        25 ~~~~~~~pp~p~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~   97 (494)
                      .....+.||||+++|++|+++++     ..++++++.+++++||+  +|++++++.++++++||+++++|+.++ ..|..
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence            45566789999999999998876     24788999999999997  799999999999999999999999865 44443


Q ss_pred             CCCcccccccccCCCCcccccCChhHHHHHHHhhhccC-ChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHH
Q 011093           98 RNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIF-TSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFD  176 (494)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  176 (494)
                      +....... . . +.+.+...+|+.|+++|+.+. +.| ++++++.+.+.+.+.++++++.+..    ++.+|+.+++..
T Consensus       116 ~~~~~~~~-~-~-g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~  187 (490)
T PLN02302        116 GWPESTVE-L-I-GRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK  187 (490)
T ss_pred             CCchhHHH-H-h-ccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence            32211111 1 1 333445567999999999998 667 5788999999999999999988853    346999999999


Q ss_pred             HHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093          177 TVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRL  256 (494)
Q Consensus       177 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (494)
                      +++++++.++||.++...    ..++.+.+.........  +...+|..       ...+..+..+.+.+++.+.+++++
T Consensus       188 ~~~~vi~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        188 LTFKIIMYIFLSSESELV----MEALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHHHHcCCCChHH----HHHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999876432    12332222222111100  01111211       112334556677788888888876


Q ss_pred             HHHhhcCCCCchhHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCC
Q 011093          257 EQRQEHGFADSKDMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGK  334 (494)
Q Consensus       257 ~~~~~~~~~~~~d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  334 (494)
                      +..+........|+++.|++..++  ..++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+.
T Consensus       255 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~  334 (490)
T PLN02302        255 NSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKK  334 (490)
T ss_pred             HhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence            654322112456999999987543  358999999999999999999999999999999999999999999999998864


Q ss_pred             C----CCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCC
Q 011093          335 G----NLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKP  410 (494)
Q Consensus       335 ~----~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p  410 (494)
                      .    ..++++++++||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|
T Consensus       335 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~P  413 (490)
T PLN02302        335 RPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDP  413 (490)
T ss_pred             CCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccCh
Confidence            2    126889999999999999999999999987 46999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCC
Q 011093          411 ERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNE  465 (494)
Q Consensus       411 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  465 (494)
                      +||++.+    .....|+|||.|+|.|+|++||.+|++++++.++++|+|++.++
T Consensus       414 eR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  464 (490)
T PLN02302        414 SRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP  464 (490)
T ss_pred             hhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence            9998643    13347999999999999999999999999999999999998754


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=7.8e-69  Score=513.98  Aligned_cols=434  Identities=24%  Similarity=0.326  Sum_probs=330.3

Q ss_pred             CCCCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCC
Q 011093           26 KGSRKLPPGPTPLPIIGNLLELG-----HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNV  100 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~  100 (494)
                      ..+.+.||||.++|++|+++.+.     .++..++.+++++||++|+++++++++++|+||+++++++.++...|.++..
T Consensus        26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            44556799999999999998762     4688899999999999999999999999999999999999987776654422


Q ss_pred             cccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHH
Q 011093          101 PESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVN  180 (494)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~  180 (494)
                      ......+  ++.++ +..+|+.|+++|+++. +.++.+.++.+.   ..++.++++...+..  .+++++.+.+.+++++
T Consensus       106 ~~~~~~l--g~~~l-~~~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~v~~~~~~~~~t~~  176 (472)
T PLN02987        106 GSISNLL--GKHSL-LLMKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW--SSRVLLMEEAKKITFE  176 (472)
T ss_pred             HHHHHHh--Ccccc-cccCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh--ccceehHHHHHHHHHH
Confidence            1111212  12344 4457999999999986 544444444432   222333333322211  2469999999999999


Q ss_pred             HHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011093          181 LLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQ  260 (494)
Q Consensus       181 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (494)
                      ++++++||.+.....    ..+.+.+.......    ....+|++.     ...++..+..+.+.+++.+.++++.+...
T Consensus       177 vi~~~~fg~~~~~~~----~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  243 (472)
T PLN02987        177 LTVKQLMSFDPGEWT----ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEEE  243 (472)
T ss_pred             HHHHHHcCCCChHHH----HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999999997753221    22333332222111    112234431     22355667788888899999988876543


Q ss_pred             hcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC---CCCC
Q 011093          261 EHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG---KGNL  337 (494)
Q Consensus       261 ~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~---~~~~  337 (494)
                      .+.. ...|+++.|++..  .+++++|+.++++.+++||+|||+.+++|++++|++||++|+++++|++++.+   ++..
T Consensus       244 ~~~~-~~~d~l~~ll~~~--~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~  320 (472)
T PLN02987        244 EGAE-KKKDMLAALLASD--DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYS  320 (472)
T ss_pred             ccCc-ccccHHHHHHhcC--CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCC
Confidence            2211 3569999999764  36999999999999999999999999999999999999999999999998875   2345


Q ss_pred             CCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCC
Q 011093          338 IEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSD  417 (494)
Q Consensus       338 ~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~  417 (494)
                      ++.+++.+|||++||++|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|+||++.+
T Consensus       321 ~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~  399 (472)
T PLN02987        321 LEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNS  399 (472)
T ss_pred             CCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCC
Confidence            7889999999999999999999999985 579999999999999999999999999999999999999999999999754


Q ss_pred             CCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093          418 VDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA  493 (494)
Q Consensus       418 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      ... .....++|||+|+|.|+|++||..|++++++.|+++|+|++.++.     +.  ....+..|..++.++.++
T Consensus       400 ~~~-~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----~~--~~~~~~~p~~~~~~~~~~  467 (472)
T PLN02987        400 GTT-VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-----KL--VFFPTTRTQKRYPINVKR  467 (472)
T ss_pred             CCC-CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC-----ce--eecccccCCCCceEEEEe
Confidence            221 223579999999999999999999999999999999999986552     22  123366666666666543


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=4.1e-69  Score=521.25  Aligned_cols=448  Identities=24%  Similarity=0.362  Sum_probs=346.8

Q ss_pred             CCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc
Q 011093           30 KLPPGPTPLPIIGNLLEL-----GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV  104 (494)
Q Consensus        30 ~~pp~p~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  104 (494)
                      +.-.|-.|+|.+|..+++     .+.++..+.+|+++||+||++++|+.++++++||+++++|+++.+..|.++......
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            455688899999998877     466789999999999999999999999999999999999998766667655432221


Q ss_pred             cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHH-HHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHH
Q 011093          105 GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQD-LRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLS  183 (494)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~  183 (494)
                      ...  .+.+ ++..+|+.|+++|+.++ +.|+..+++.+.+ .+.++++.+++.+.+...+++++|+.+++..+++|+++
T Consensus        92 ~~~--~~~~-i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         92 EFL--FGSG-FAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             HHH--hcCc-cccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            111  1334 35567999999999998 8899888887755 77888999999998765556789999999999999999


Q ss_pred             HHHhcccccccCcchHHHHHHHHHHHHHHhcCCCcccccccccc--CC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011093          184 NSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRK--LD-IQGVRRRLTRHYIKILEVLDRFIDQRLEQRQ  260 (494)
Q Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (494)
                      .++||.+++..+.+  .++.+.+...+..... .....+|++..  +. .....++..+..+.+.+++.+.++++++..+
T Consensus       168 ~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~  244 (489)
T PLN02936        168 LSVFNYNFDSLTTD--SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVE  244 (489)
T ss_pred             HHHcCCCccccccC--cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998754322  2334444333222211 11112332210  00 0112345667777888888888887765432


Q ss_pred             hcC---------CCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Q 011093          261 EHG---------FADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQK  331 (494)
Q Consensus       261 ~~~---------~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  331 (494)
                      +..         .....|+++.|++..  .+++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~d~l~~ll~~~--~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~  322 (489)
T PLN02936        245 AEGEVIEGEEYVNDSDPSVLRFLLASR--EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRV  322 (489)
T ss_pred             hcccccccccccccCchHHHHHHHhcc--ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            111         012468999998754  358999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCC
Q 011093          332 VGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPE  411 (494)
Q Consensus       332 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~  411 (494)
                      ++. ..++++++++||||+|||+||||++|+++...+|.+..|+.++||.||+|+.|+++.+++||||++|+||++|+|+
T Consensus       323 ~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~Pe  401 (489)
T PLN02936        323 LQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPE  401 (489)
T ss_pred             hcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcc
Confidence            874 4578899999999999999999999999988777777888889999999999999999999999999999999999


Q ss_pred             CccCCCCC--CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeE
Q 011093          412 RFLGSDVD--VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRV  489 (494)
Q Consensus       412 R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (494)
                      ||++++..  .......|+|||.|+|.|+|++||++|+++++++|+++|+++++++   .++...  .+++..++.++++
T Consensus       402 Rwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~---~~~~~~--~~~~~~~~~~~~v  476 (489)
T PLN02936        402 RFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPD---QDIVMT--TGATIHTTNGLYM  476 (489)
T ss_pred             ccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCC---Ccccee--cceEEeeCCCeEE
Confidence            99964421  1223357999999999999999999999999999999999998765   233332  2344445555555


Q ss_pred             eee
Q 011093          490 VPV  492 (494)
Q Consensus       490 ~~~  492 (494)
                      +.+
T Consensus       477 ~~~  479 (489)
T PLN02936        477 TVS  479 (489)
T ss_pred             EEE
Confidence            543


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.1e-66  Score=503.18  Aligned_cols=436  Identities=19%  Similarity=0.248  Sum_probs=329.5

Q ss_pred             CCcccccccCCCCCcHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-cccccccCCCCcc
Q 011093           38 LPIIGNLLELGHKPHKSLAELAKVHG-PIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-SVGSIQKDEYGIP  115 (494)
Q Consensus        38 ~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  115 (494)
                      .++.|++.....+..+++..+.++++ .+++++..+.  ++++||+.+++|+..+...|.+..... .....  .|.|+ 
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~gi-  123 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRGI-  123 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCce-
Confidence            55788887654556777777888887 5788876553  899999999999987666666543221 11122  14554 


Q ss_pred             cccCChhHHHHHHHhhhccCChhHHhhcH--HHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhcccc
Q 011093          116 WLPVSTKWKKLRKICNLHIFTSQKLDANQ--DLRRKKIQQLVTFVQESCR--TGEPIDVGQAAFDTVVNLLSNSIFSVDL  191 (494)
Q Consensus       116 ~~~~~~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~~~~~~~~fG~~~  191 (494)
                      ++.+|+.|+.+||.+. +.|+..+++.+.  +.+.+..+.+++.+.+..+  ++.++|+.+++..+++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            6678999999999998 889998888764  5677777888888865432  2467999999999999999999999998


Q ss_pred             cccCcc-hHHHHHHHHHHHHHHhcCCCccccccccc----cCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 011093          192 ADANSD-SAREFKDSMWGLMVEAGRPNLSDFFPMLR----KLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFAD  266 (494)
Q Consensus       192 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  266 (494)
                      +..+.. ...++.+++..+....... ....+|++.    .++ .+..++..+..+.+.+++.+.|+++++..   .. .
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~---~~-~  276 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKLG---FS-A  276 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhcc---cC-C
Confidence            654321 2244555554433211110 011112211    111 12234556677778888888888776541   11 3


Q ss_pred             chhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCC-CCCCccccCC
Q 011093          267 SKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKG-NLIEESDITQ  345 (494)
Q Consensus       267 ~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~  345 (494)
                      ..|+++.+++..    .+++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+++ ..++++++++
T Consensus       277 ~~dll~~ll~~~----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~  352 (502)
T PLN02426        277 SKDLLSRFMASI----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKE  352 (502)
T ss_pred             cchHHHHHHhcC----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhc
Confidence            569999999753    37889999999999999999999999999999999999999999999988753 3679999999


Q ss_pred             ChhHHHHHHHHhhcCCCCCCcCccccccceee-ccEEeCCCCEEEechhhhccCCCCC-CCCCCCCCCCccCCCCCCCCC
Q 011093          346 LPYLQTIVKETLRLHPPVPLLLPRKASADVEI-TGFIIPKGAQVLVNAWAIGRDTSTW-DDPYSFKPERFLGSDVDVKGR  423 (494)
Q Consensus       346 l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~  423 (494)
                      ||||+|||+|+||++|+++.. .|.+.+|.++ +||.||+|+.|.++.+++||||++| +||++|+||||+++.......
T Consensus       353 LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~  431 (502)
T PLN02426        353 MHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPEN  431 (502)
T ss_pred             ChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCC
Confidence            999999999999999999985 5889988887 8999999999999999999999999 999999999999743111223


Q ss_pred             ccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093          424 NFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA  493 (494)
Q Consensus       424 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      ++.++|||+|+|.|+|++||.+|++++++.|+++|++++.++.. .....  ..+++..++.+++++.++
T Consensus       432 ~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~--~~~~~~~~~~gl~v~~~~  498 (502)
T PLN02426        432 PFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-RAPRF--APGLTATVRGGLPVRVRE  498 (502)
T ss_pred             CcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-CCCcc--cceeEEecCCCEEEEEEE
Confidence            45799999999999999999999999999999999999864421 11122  234667777777776553


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=6.2e-61  Score=455.44  Aligned_cols=401  Identities=15%  Similarity=0.210  Sum_probs=295.9

Q ss_pred             CCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCC-ceEEecCCeeE-------EEeCCHHHHHHHHHh--
Q 011093           26 KGSRKLPPGPTPLPIIGNLLEL-----GHKPHKSLAELAKVHGP-IMSLKFGQVTT-------VVISSATMAKQVLQD--   90 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~g~~~~-------v~v~dp~~~~~i~~~--   90 (494)
                      ..+.+.|||+.++|++|++.++     ..++..|+.+.++|||+ ||+++++|.++       |+++||+.++.+|.+  
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~   92 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK   92 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence            3456779999999999999864     35668999999999998 99999988665       999999999999975  


Q ss_pred             --cCcccCCCCCcccccccccCCCC---cccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCC
Q 011093           91 --HDKSLCNRNVPESVGSIQKDEYG---IPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTG  165 (494)
Q Consensus        91 --~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  165 (494)
                        ++..+.. ....... + . |.+   .++..+|+.|+++|+++. +.|+ ..++.+.+.+.+.++.+++.|......+
T Consensus        93 ~~~~~~~~~-~~~~~~~-l-~-G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~  166 (480)
T PLN02648         93 VDKRDVFTG-TYMPSTA-F-T-GGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKK  166 (480)
T ss_pred             cccccccee-eeccCcc-c-c-CCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhC
Confidence              3333332 2222223 2 1 323   456678999999999998 8898 4778899999999999999996543345


Q ss_pred             CceehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHH---------
Q 011093          166 EPIDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRR---------  236 (494)
Q Consensus       166 ~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~---------  236 (494)
                      .++|+.+.+..+++|++++++||.+.+..  .....+......+....       ..|..... .....++         
T Consensus       167 ~~vdv~~~~~~lt~~vi~~~lfG~~~~~~--~l~~~~~~~~~~~~~~~-------~~p~~~~~-l~~~~~~~i~~~~~~~  236 (480)
T PLN02648        167 GKAEFNDPLDQMAFNFLCKALTGKDPSET--ALGSDGPALIQKWLALQ-------LAPLASTG-LPHVLEELLLHTFPLP  236 (480)
T ss_pred             CCccccchHHHHHHHHHHHHHcCCCcchh--hhccchhHHHHHHHHHH-------hhHHHHcC-chHHHHHHhhcccCCc
Confidence            57999999999999999999999876541  01111111121111100       01110000 0000000         


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCCCCCHHHHHHHHHH-HHHhcCCchHHHHHHHHH
Q 011093          237 ---LTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESEEIDRNDIKFVILD-LFAAGTETTSSTLEWAVT  312 (494)
Q Consensus       237 ---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~-~~~ag~~tt~~~l~~~l~  312 (494)
                         ..+..+.+.++++                   +.++.+++..++.+++++|+.++++. +.+++++|++++++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~-------------------~~~~~ll~~~~~~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~  297 (480)
T PLN02648        237 FFLVKSDYDKLYDFFR-------------------ASATEALDLAEKFGISREEALHNLLFVLGFNAFGGFKIFFPALLK  297 (480)
T ss_pred             hhhhhccHHHHHHHHH-------------------HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence               0001111111111                   11223333222245999999998875 457778888889999999


Q ss_pred             HHHhCHH-HHHHHHHHHHHhhCC-CCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeec----cEEeCCCC
Q 011093          313 ELLNNSE-ALSKARLELEQKVGK-GNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEIT----GFIIPKGA  386 (494)
Q Consensus       313 ~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~----g~~ip~g~  386 (494)
                      +|++||+ +|++|++|++++++. +..++++++++|||+++||+|+||++|+++.. .|++.+|++++    ||.||||+
T Consensus       298 ~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~  376 (480)
T PLN02648        298 WVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKKGE  376 (480)
T ss_pred             HHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECCCC
Confidence            9999995 999999999999863 45689999999999999999999999999985 48899999996    79999999


Q ss_pred             EEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccC---------CCCCCCCCChHHHHHHHHHHHHHHhhh
Q 011093          387 QVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPF---------GAGRRICPGLPLAIRMLYLMLGSLIKS  457 (494)
Q Consensus       387 ~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~a~~~~~~~l~~ll~~  457 (494)
                      .|.++.+.+||||++|+||++|||+||++++.+.   ...+++|         |+|+|.|+|++||++|+++++++|+++
T Consensus       377 ~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~  453 (480)
T PLN02648        377 MLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLR  453 (480)
T ss_pred             EEEEChHHHhCCcccCCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998643221   1233444         677899999999999999999999999


Q ss_pred             ce-eecCCC
Q 011093          458 FD-WKLDNE  465 (494)
Q Consensus       458 f~-~~~~~~  465 (494)
                      |+ |++.++
T Consensus       454 f~~~~l~~~  462 (480)
T PLN02648        454 YDSFEIEVD  462 (480)
T ss_pred             hCEEeecCC
Confidence            98 998766


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.3e-54  Score=406.14  Aligned_cols=358  Identities=28%  Similarity=0.378  Sum_probs=292.3

Q ss_pred             CcHHHHHHHHhhCCceEEecCCee--EEEeCCHHHHHHHHHhcCcccCCCCCcccccc--cccCCCCcccccCChhHHHH
Q 011093           51 PHKSLAELAKVHGPIMSLKFGQVT--TVVISSATMAKQVLQDHDKSLCNRNVPESVGS--IQKDEYGIPWLPVSTKWKKL  126 (494)
Q Consensus        51 ~~~~~~~~~~kyG~v~~~~~g~~~--~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~w~~~  126 (494)
                      +......+.+.||.++++...+.-  ++++++++++++++.+.. .++..........  ....+.+.++..+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            455667788899999988866544  799999999999998753 1222211111111  11123444677899999999


Q ss_pred             HHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHH
Q 011093          127 RKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSM  206 (494)
Q Consensus       127 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  206 (494)
                      ||.++ +.|+++.++.+.+.+.+.++++++.+ .  .+ +.+++.+.+..+++++++ .+||.+..+.     ..+....
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-----~~~~~~~  171 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR-----PQLLRWS  171 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH-----HHHHHHH
Confidence            99998 99999999999999999999999988 3  23 678899999999999999 9999887553     2222222


Q ss_pred             HHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCC--CCC
Q 011093          207 WGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESE--EID  284 (494)
Q Consensus       207 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~--~ls  284 (494)
                      .......        .|...   ......+..++.+++.+++.++|++++..       ...|+++.|+.+.+++  .+|
T Consensus       172 ~~~~~~~--------~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~-------~~~dlls~l~~a~~~~~~~ls  233 (411)
T COG2124         172 DALLLRL--------DPDLG---PEEPWRRARAARRELDAYLRALIAERRAA-------PRDDLLSLLLSAEDDGGGRLS  233 (411)
T ss_pred             HHHHhcc--------CcccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC-------CcccHHHHHHHHhhCCCCcCC
Confidence            2221110        01111   11223556788888999999999888732       5679999999987764  499


Q ss_pred             HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCC
Q 011093          285 RNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVP  364 (494)
Q Consensus       285 ~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~  364 (494)
                      ++|+.++++++++||+|||+++++|+++.|++||+.++++++|.+.                ||++++++|+||++|+++
T Consensus       234 d~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~  297 (411)
T COG2124         234 DDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVP  297 (411)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchh
Confidence            9999999999999999999999999999999999999999999764                889999999999999999


Q ss_pred             CcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHH
Q 011093          365 LLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAI  444 (494)
Q Consensus       365 ~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  444 (494)
                      . ..|.+++|++++|+.||||+.|.++++++||||++|++|++|||+||.          ..|+|||+|+|.|+|+.||.
T Consensus       298 ~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~  366 (411)
T COG2124         298 L-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALAR  366 (411)
T ss_pred             c-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHH
Confidence            8 789999999999999999999999999999999999999999999996          37999999999999999999


Q ss_pred             HHHHHHHHHHhhhceeecCCC
Q 011093          445 RMLYLMLGSLIKSFDWKLDNE  465 (494)
Q Consensus       445 ~~~~~~l~~ll~~f~~~~~~~  465 (494)
                      +|++++++.++++|++....+
T Consensus       367 ~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         367 LELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             HHHHHHHHHHHHhCchhhcCC
Confidence            999999999999999887654


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=64.56  E-value=23  Score=21.67  Aligned_cols=44  Identities=27%  Similarity=0.259  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 011093          286 NDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELE  329 (494)
Q Consensus       286 ~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  329 (494)
                      -++...+..++-.|.|-.+..+.--+.+.--||+...++-.|++
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            35566777777788888888887888888889999888888763


No 34 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=57.69  E-value=12  Score=23.85  Aligned_cols=25  Identities=28%  Similarity=0.279  Sum_probs=19.0

Q ss_pred             HHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093          309 WAVTELLNNSEALSKARLELEQKVG  333 (494)
Q Consensus       309 ~~l~~L~~~p~~~~~l~~Ei~~~~~  333 (494)
                      -++.+|.+||++.+++.+.=.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4678999999999999876444443


No 35 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=48.16  E-value=11  Score=24.88  Aligned_cols=44  Identities=16%  Similarity=0.213  Sum_probs=24.8

Q ss_pred             CHHHHHHHHHHHHHhhCCCCC-------CCccccCCChhHHHHHHHHhhcC
Q 011093          317 NSEALSKARLELEQKVGKGNL-------IEESDITQLPYLQTIVKETLRLH  360 (494)
Q Consensus       317 ~p~~~~~l~~Ei~~~~~~~~~-------~~~~~~~~l~~l~a~i~E~lRl~  360 (494)
                      |-++...+..||+....+.+.       ++-+--.+..+++.+|+|++|..
T Consensus         4 N~~ik~ql~keIRrpGr~ye~iF~lL~~vqG~~~~r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen    4 NADIKSQLMKEIRRPGRNYEKIFKLLEQVQGPLEVRKQFVEMIIKEAARFK   54 (65)
T ss_pred             hHHHHHHHHHHHHccCCcHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Confidence            445666677777654322110       11111124567999999999973


No 36 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=46.76  E-value=17  Score=30.49  Aligned_cols=43  Identities=23%  Similarity=0.402  Sum_probs=33.2

Q ss_pred             CChhHHHHHHHHhhcCCCCCCcCcc-ccccceeeccEEeCCCCEEEe
Q 011093          345 QLPYLQTIVKETLRLHPPVPLLLPR-KASADVEITGFIIPKGAQVLV  390 (494)
Q Consensus       345 ~l~~l~a~i~E~lRl~~~~~~~~~R-~~~~~~~~~g~~ip~g~~v~~  390 (494)
                      .-..+.|||.|+.-+..-...   | +..+|+.++|..||||+.|+.
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~v---rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRV---RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEE---EEEEcCceEECCEEeCCCCEEEE
Confidence            345688999999877654432   3 467899999999999998876


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=44.22  E-value=31  Score=23.50  Aligned_cols=40  Identities=15%  Similarity=0.132  Sum_probs=32.3

Q ss_pred             HHHHHhhcCCCCCCcCccccccce--eeccEEeCCCCEEEec
Q 011093          352 IVKETLRLHPPVPLLLPRKASADV--EITGFIIPKGAQVLVN  391 (494)
Q Consensus       352 ~i~E~lRl~~~~~~~~~R~~~~~~--~~~g~~ip~g~~v~~~  391 (494)
                      -++|-+.|.+-...-+.|.+.+++  .++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            478899999988777778777644  4589999999998875


No 38 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=42.26  E-value=1.1e+02  Score=29.47  Aligned_cols=49  Identities=14%  Similarity=0.132  Sum_probs=29.4

Q ss_pred             CCCcHHHHHHHH-hhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCC
Q 011093           49 HKPHKSLAELAK-VHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCN   97 (494)
Q Consensus        49 ~~~~~~~~~~~~-kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~   97 (494)
                      -++.+.++-..+ +||.|+.-.+-++.+-|=.=|+.-++=+.+....|+.
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence            346666665544 8888888777777766544444445545555444443


No 39 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=42.12  E-value=1.2e+02  Score=21.37  Aligned_cols=50  Identities=10%  Similarity=0.058  Sum_probs=42.1

Q ss_pred             CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhh
Q 011093          283 IDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKV  332 (494)
Q Consensus       283 ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  332 (494)
                      -+...........++-=++.++....-.+.+.++||+..+++.+.+..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34555666677788899999999999999999999999999999987654


No 40 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=39.99  E-value=60  Score=24.10  Aligned_cols=11  Identities=36%  Similarity=0.253  Sum_probs=7.0

Q ss_pred             CCCcccccccC
Q 011093           37 PLPIIGNLLEL   47 (494)
Q Consensus        37 ~~p~lG~~~~~   47 (494)
                      ..|+.||+-..
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46778876543


No 41 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=37.39  E-value=32  Score=26.44  Aligned_cols=22  Identities=23%  Similarity=0.374  Sum_probs=16.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhh
Q 011093          436 ICPGLPLAIRMLYLMLGSLIKS  457 (494)
Q Consensus       436 ~C~G~~~a~~~~~~~l~~ll~~  457 (494)
                      .|.|++||...+-.++++|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            5999999999999999999864


No 42 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=36.47  E-value=24  Score=24.68  Aligned_cols=21  Identities=19%  Similarity=0.419  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHhhhceeecCCC
Q 011093          445 RMLYLMLGSLIKSFDWKLDNE  465 (494)
Q Consensus       445 ~~~~~~l~~ll~~f~~~~~~~  465 (494)
                      ..|+-+++++|+-|||.+++-
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            357889999999999999763


No 43 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=34.99  E-value=1.7e+02  Score=21.48  Aligned_cols=63  Identities=24%  Similarity=0.282  Sum_probs=43.4

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCC------eeEEEeCCHHHHHHHHHh
Q 011093           26 KGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQ------VTTVVISSATMAKQVLQD   90 (494)
Q Consensus        26 ~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~------~~~v~v~dp~~~~~i~~~   90 (494)
                      +.+.+.||....+-++-|+..  +-..+...++.-+||+|-.+.+|.      .-+||-.|-..++..+..
T Consensus         8 ~~~~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen    8 KQNIRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             cCCCCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            445566666666666666542  223567778888999999998864      456777777777777653


No 44 
>COG1610 Uncharacterized conserved protein [Function unknown]
Probab=32.21  E-value=2.1e+02  Score=22.49  Aligned_cols=54  Identities=19%  Similarity=0.324  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCchhHHHH------HhccccCCCCCHHHHHHHHHHHH
Q 011093          243 KILEVLDRFIDQRLEQRQEHGFADSKDMLDT------LLNISESEEIDRNDIKFVILDLF  296 (494)
Q Consensus       243 ~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~------ll~~~~~~~ls~~ei~~~~~~~~  296 (494)
                      ++..++.+.+.+|.+..+.=..+.+.|+.+.      +++.+.+.+++++|+...+-..+
T Consensus        49 ~il~vl~k~iKQRrdS~~~y~~agR~dLa~kE~~Ei~Ii~~ylP~qLsd~e~~~~v~~aI  108 (148)
T COG1610          49 EILKVLAKEIKQRRDSAEEYEKAGRQDLAAKERAEIAIIEEYLPQQLSEDELRALVDAAI  108 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhHHHHHHHhCcccCCHHHHHHHHHHHH
Confidence            3555566666666655432111134444433      33334457799999998876554


No 45 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=31.28  E-value=20  Score=26.00  Aligned_cols=16  Identities=38%  Similarity=0.559  Sum_probs=13.8

Q ss_pred             cccccCCCCCCCCCCh
Q 011093          425 FELIPFGAGRRICPGL  440 (494)
Q Consensus       425 ~~~~~Fg~G~r~C~G~  440 (494)
                      ...+|||.|.-.|.|.
T Consensus       105 ss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  105 SSNNPFGAGAAACFAA  120 (131)
T ss_pred             cccCCcCccHHHHHHH
Confidence            4678999999999885


No 46 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=28.01  E-value=1.2e+02  Score=21.44  Aligned_cols=18  Identities=22%  Similarity=0.353  Sum_probs=15.4

Q ss_pred             CHHHHHHHHHHHHHhhCC
Q 011093          317 NSEALSKARLELEQKVGK  334 (494)
Q Consensus       317 ~p~~~~~l~~Ei~~~~~~  334 (494)
                      .|++.+.+|+||.+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            389999999999988754


No 47 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=27.69  E-value=29  Score=21.68  Aligned_cols=10  Identities=50%  Similarity=1.089  Sum_probs=8.6

Q ss_pred             cCCCCCCCCC
Q 011093          429 PFGAGRRICP  438 (494)
Q Consensus       429 ~Fg~G~r~C~  438 (494)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            7999999974


No 48 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=27.60  E-value=1.5e+02  Score=22.84  Aligned_cols=38  Identities=13%  Similarity=0.194  Sum_probs=30.0

Q ss_pred             CcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHh
Q 011093           51 PHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQD   90 (494)
Q Consensus        51 ~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~   90 (494)
                      -...+++|.++||.+--.  .+...+...|++.++++...
T Consensus        76 v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~  113 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD  113 (129)
T ss_pred             HHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence            357889999999986542  24678889999999999864


No 49 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=26.74  E-value=1.4e+02  Score=18.46  Aligned_cols=36  Identities=19%  Similarity=0.223  Sum_probs=25.5

Q ss_pred             HHHHHHhhCCceEEecC----CeeEEEeCCHHHHHHHHHh
Q 011093           55 LAELAKVHGPIMSLKFG----QVTTVVISSATMAKQVLQD   90 (494)
Q Consensus        55 ~~~~~~kyG~v~~~~~g----~~~~v~v~dp~~~~~i~~~   90 (494)
                      +.+..++||+|-.+.+.    +.-+|-..+++.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            35677899999887643    3346667899998888763


No 50 
>COG5598 Trimethylamine:corrinoid methyltransferase [Coenzyme metabolism]
Probab=26.72  E-value=1e+02  Score=29.74  Aligned_cols=71  Identities=21%  Similarity=0.205  Sum_probs=48.8

Q ss_pred             hhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccc
Q 011093          347 PYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFE  426 (494)
Q Consensus       347 ~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~  426 (494)
                      -+=...++|.++..|......+|-..+|+.++|-.                                           ..
T Consensus       100 r~~r~lv~~~l~~aps~ftl~aRnp~r~v~igG~~-------------------------------------------v~  136 (526)
T COG5598         100 RFPRGLVREALKSAPSSFTLHARNPKRDVQIGGNN-------------------------------------------VH  136 (526)
T ss_pred             eecHHHHHHHHHhCchhheeccCCcccceeecCce-------------------------------------------eE
Confidence            33467889999988777666666666666665422                                           24


Q ss_pred             cccCCCCCCCC---CChHHHHHHHHHHHHHHhhhcee
Q 011093          427 LIPFGAGRRIC---PGLPLAIRMLYLMLGSLIKSFDW  460 (494)
Q Consensus       427 ~~~Fg~G~r~C---~G~~~a~~~~~~~l~~ll~~f~~  460 (494)
                      |.|++++++.|   -||+.+..+-..=+++|.+.++.
T Consensus       137 f~~~~gap~v~Dl~~grr~gtl~D~~n~~kLa~~~~~  173 (526)
T COG5598         137 FGPAYGAPNVRDLDKGRRYGTLEDYRNLAKLAQHAPN  173 (526)
T ss_pred             EEecCCCceeeeccCCcccchHHHHHHHHHHHhhcch
Confidence            55666666666   46777888888888888888874


No 51 
>PHA03049 IMV membrane protein; Provisional
Probab=25.12  E-value=2.1e+02  Score=18.88  Aligned_cols=28  Identities=14%  Similarity=0.167  Sum_probs=11.6

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 011093            6 SCVLWLLFTWVWVITLRSFSKGSRKLPPGP   35 (494)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~pp~p   35 (494)
                      +.|++++.+++|.++.+  .+.....||.|
T Consensus         9 iICVaIi~lIvYgiYnk--k~~~q~~~p~~   36 (68)
T PHA03049          9 IICVVIIGLIVYGIYNK--KTTTSQNPPSQ   36 (68)
T ss_pred             HHHHHHHHHHHHHHHhc--ccccCCCCCCh
Confidence            33444444444444333  33334444443


No 52 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=25.05  E-value=1.8e+02  Score=19.30  Aligned_cols=17  Identities=12%  Similarity=-0.017  Sum_probs=7.8

Q ss_pred             HHHHHHHHHHHHHHHHh
Q 011093            6 SCVLWLLFTWVWVITLR   22 (494)
Q Consensus         6 ~~~~~~~~~~~~~~~~~   22 (494)
                      ..|++++.+++|..+.+
T Consensus         9 ~ICVaii~lIlY~iYnr   25 (68)
T PF05961_consen    9 IICVAIIGLILYGIYNR   25 (68)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            33444444555554443


No 53 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.79  E-value=1.2e+02  Score=17.51  Aligned_cols=12  Identities=17%  Similarity=0.099  Sum_probs=9.2

Q ss_pred             HhCHHHHHHHHH
Q 011093          315 LNNSEALSKARL  326 (494)
Q Consensus       315 ~~~p~~~~~l~~  326 (494)
                      .+||++++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            379999887764


No 54 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=24.51  E-value=63  Score=20.34  Aligned_cols=17  Identities=29%  Similarity=0.417  Sum_probs=14.7

Q ss_pred             CCceEEecCCeeEEEeC
Q 011093           63 GPIMSLKFGQVTTVVIS   79 (494)
Q Consensus        63 G~v~~~~~g~~~~v~v~   79 (494)
                      |+|++++.||..++|..
T Consensus         4 GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    4 GDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCEEEEccCCCCeEEEE
Confidence            89999999998888763


No 55 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=23.74  E-value=3.9e+02  Score=24.38  Aligned_cols=75  Identities=15%  Similarity=0.128  Sum_probs=48.6

Q ss_pred             hHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCcccc--CCC
Q 011093          269 DMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDI--TQL  346 (494)
Q Consensus       269 d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~--~~l  346 (494)
                      .+.+.|....  .+-+-+-|++++-.|-+.|.                +|...+.|.++-.=.+-+++.++...+  .++
T Consensus       331 aLrd~L~aL~--TPGtWDHI~~QiGMFSyTGL----------------tp~qV~~li~~h~vyLl~~GRInisGLN~~Nv  392 (410)
T KOG1412|consen  331 ALRDHLVALK--TPGTWDHITQQIGMFSYTGL----------------TPAQVDHLIENHKVYLLSDGRINISGLNMKNV  392 (410)
T ss_pred             HHHHHHHhcC--CCCcHHHHHhhccceeecCC----------------CHHHHHHHHHhceEEEecCCcEeeeccccccH
Confidence            3455554432  33467788888887777776                444555555554434444555665555  489


Q ss_pred             hhHHHHHHHHhhcCC
Q 011093          347 PYLQTIVKETLRLHP  361 (494)
Q Consensus       347 ~~l~a~i~E~lRl~~  361 (494)
                      .|+-..|.|+.|-.+
T Consensus       393 eyVAkAIde~Vr~~~  407 (410)
T KOG1412|consen  393 EYVAKAIDETVRAIK  407 (410)
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999999654


No 56 
>KOG4241 consensus Mitochondrial ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=23.16  E-value=1.2e+02  Score=25.43  Aligned_cols=40  Identities=15%  Similarity=0.186  Sum_probs=30.0

Q ss_pred             cHHHHHHHH--hhCCceEEecCCeeEEEeCCHHHHHHHHHhc
Q 011093           52 HKSLAELAK--VHGPIMSLKFGQVTTVVISSATMAKQVLQDH   91 (494)
Q Consensus        52 ~~~~~~~~~--kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~   91 (494)
                      .+.+++..+  +|..+..+.+|...++++.|++.++++++.-
T Consensus       124 nkIlk~~~~~t~y~~l~plfvgnh~ill~~d~~kik~~lri~  165 (245)
T KOG4241|consen  124 NKILKKIFDKTPYSSLNPLFVGNHAILLAKDISKIKSILRIT  165 (245)
T ss_pred             HHHHHHHHhcCchhhhhhheeccceEEEcCChHHHHHHHHHH
Confidence            344444443  5666777788888999999999999999753


No 57 
>PF07055 Eno-Rase_FAD_bd:  Enoyl reductase FAD binding domain;  InterPro: IPR010758 This family contains a number of bacterial putative reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3S8M_A 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A.
Probab=22.54  E-value=48  Score=21.85  Aligned_cols=39  Identities=18%  Similarity=0.141  Sum_probs=25.6

Q ss_pred             CHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCC
Q 011093          317 NSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPP  362 (494)
Q Consensus       317 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~  362 (494)
                      .|++|+++.+=..+       ++.+++.++.=++.+-+|-++|+--
T Consensus        16 ~~dvQ~~V~~lw~~-------it~en~~el~D~~gy~~eFl~L~GF   54 (65)
T PF07055_consen   16 RPDVQAEVAELWEQ-------ITTENFKELGDYDGYRQEFLQLFGF   54 (65)
T ss_dssp             SHHHHHHHHHHHCC-------T-CCCHHHHS-HHHHHHHHHHHTT-
T ss_pred             CHHHHHHHHHHHHH-------hccccHHHHHhHHHHHHHHHHHcCC
Confidence            46666665554433       5666777777789999999999754


No 58 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=22.46  E-value=57  Score=21.07  Aligned_cols=8  Identities=50%  Similarity=0.937  Sum_probs=5.8

Q ss_pred             CCCCccCC
Q 011093          409 KPERFLGS  416 (494)
Q Consensus       409 ~p~R~l~~  416 (494)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888753


No 59 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=21.62  E-value=2.3e+02  Score=19.79  Aligned_cols=38  Identities=11%  Similarity=0.174  Sum_probs=28.2

Q ss_pred             cHHHHHHHHhhCCc---eEEecCCeeEEEeCCH-----HHHHHHHH
Q 011093           52 HKSLAELAKVHGPI---MSLKFGQVTTVVISSA-----TMAKQVLQ   89 (494)
Q Consensus        52 ~~~~~~~~~kyG~v---~~~~~g~~~~v~v~dp-----~~~~~i~~   89 (494)
                      .+.-++++.+|.++   ++|..++.+-+-|++.     +.+.+|++
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq   68 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ   68 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence            35667889999887   8999888887877554     56666654


No 60 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.51  E-value=1.3e+02  Score=17.74  Aligned_cols=20  Identities=5%  Similarity=0.056  Sum_probs=15.6

Q ss_pred             HHHHHHHHHhCHHHHHHHHH
Q 011093          307 LEWAVTELLNNSEALSKARL  326 (494)
Q Consensus       307 l~~~l~~L~~~p~~~~~l~~  326 (494)
                      -.|-+..++++||+|..|.-
T Consensus        12 gl~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   12 GLFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             CHHHHHHHHcCHHHHHHHHH
Confidence            34677788999999988764


Done!