Query 011093
Match_columns 494
No_of_seqs 177 out of 1969
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 20:39:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 1.3E-77 4.4E-82 587.7 43.4 458 26-493 4-479 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 1.6E-78 5.6E-83 596.7 37.2 460 26-493 5-484 (507)
3 3tbg_A Cytochrome P450 2D6; mo 100.0 3E-77 1E-81 583.6 40.1 456 27-493 7-476 (479)
4 2hi4_A Cytochrome P450 1A2; CY 100.0 2E-76 7E-81 578.4 38.8 453 28-490 14-486 (495)
5 3k9v_A 1,25-dihydroxyvitamin D 100.0 2.8E-76 9.5E-81 577.3 38.8 451 22-492 16-480 (482)
6 3e6i_A CYPIIE1, P450-J, cytoch 100.0 9.9E-76 3.4E-80 572.3 42.5 453 26-493 6-472 (476)
7 1po5_A Cytochrome P450 2B4; ox 100.0 4.4E-76 1.5E-80 573.4 38.4 454 26-493 6-473 (476)
8 1r9o_A Cytochrome P450 2C9; mo 100.0 1.1E-75 3.8E-80 571.1 41.2 454 26-493 7-474 (477)
9 3czh_A Cytochrome P450 2R1; vi 100.0 6E-76 2E-80 572.6 38.5 453 27-492 9-475 (481)
10 2fdv_A Cytochrome P450 2A6; CY 100.0 9.8E-76 3.4E-80 571.0 39.5 454 26-493 6-473 (476)
11 3nxu_A Cytochrome P450 3A4; al 100.0 3.8E-77 1.3E-81 583.5 28.5 451 28-492 12-474 (485)
12 3qz1_A Steroid 21-hydroxylase; 100.0 2.2E-76 7.4E-81 579.8 32.4 444 24-492 23-483 (496)
13 3s79_A Cytochrome P450 19A1; o 100.0 1.7E-75 5.8E-80 574.5 37.2 445 26-493 41-496 (503)
14 3ld6_A Lanosterol 14-alpha dem 100.0 1.2E-76 4.1E-81 575.1 27.8 416 29-465 10-429 (461)
15 2ve3_A Putative cytochrome P45 100.0 6.3E-74 2.2E-78 552.6 36.0 432 26-492 8-441 (444)
16 3n9y_A Cholesterol SIDE-chain 100.0 9.9E-74 3.4E-78 559.6 36.2 450 25-492 4-472 (487)
17 3gw9_A Sterol 14alpha-demethyl 100.0 4.7E-73 1.6E-77 549.5 34.2 414 29-465 2-423 (450)
18 2cib_A Cytochrome P450 51; hem 100.0 4.9E-73 1.7E-77 548.2 33.6 414 30-464 4-421 (455)
19 2ij2_A Cytochrome P450 BM3; mo 100.0 7.5E-72 2.6E-76 541.8 35.1 414 30-461 3-424 (470)
20 3i3k_A Lanosterol 14-alpha dem 100.0 1.2E-72 4.1E-77 547.6 28.1 442 26-493 7-453 (461)
21 3mdm_A Cholesterol 24-hydroxyl 100.0 4.6E-71 1.6E-75 535.9 38.1 425 49-492 10-441 (456)
22 3dbg_A Putative cytochrome P45 100.0 1.3E-72 4.5E-77 547.6 24.7 434 28-492 21-459 (467)
23 3dax_A Cytochrome P450 7A1; ch 100.0 1.1E-69 3.9E-74 531.4 24.6 445 26-493 9-484 (491)
24 3v8d_A Cholesterol 7-alpha-mon 100.0 2.3E-69 8E-74 528.5 22.3 447 24-491 7-482 (491)
25 3b6h_A Prostacyclin synthase; 100.0 9.9E-67 3.4E-71 511.1 29.2 447 26-493 14-488 (498)
26 2cd8_A Cytochrome P450 monooxy 100.0 2.8E-65 9.6E-70 489.1 33.5 400 25-493 21-429 (436)
27 3b98_A Prostaglandin I2 syntha 100.0 9.8E-66 3.3E-70 501.4 26.0 434 26-493 14-469 (475)
28 1jfb_A Nitric-oxide reductase 100.0 2.9E-63 9.9E-68 472.3 37.9 374 31-465 2-382 (404)
29 1izo_A P450bsbeta, cytochrome 100.0 2E-63 7E-68 475.4 36.3 396 39-492 9-413 (417)
30 1ued_A P450 OXYC, P450 monooxy 100.0 2.7E-63 9.2E-68 471.6 33.6 365 28-465 8-385 (406)
31 3awm_A Fatty acid alpha-hydrox 100.0 8.6E-63 2.9E-67 470.7 35.8 401 32-494 4-413 (415)
32 2zbx_A Cytochrome P450-SU1; be 100.0 9E-62 3.1E-66 462.0 39.0 370 29-465 4-384 (412)
33 1n97_A CYP175A1; electron tran 100.0 6.5E-64 2.2E-68 473.7 21.2 381 34-492 3-384 (389)
34 1cpt_A Cytochrome P450-TERP; o 100.0 3.4E-62 1.2E-66 467.7 31.1 381 28-464 4-405 (428)
35 3aba_A Cytochrome P450; oxidor 100.0 4.6E-61 1.6E-65 455.8 36.5 353 46-465 16-377 (403)
36 1s1f_A Putative cytochrome P45 100.0 4.5E-61 1.5E-65 456.3 34.3 366 29-465 7-382 (406)
37 3a4g_A Vitamin D hydroxylase; 100.0 1.5E-60 5.1E-65 452.8 36.7 377 46-493 17-402 (411)
38 2jjn_A Cytochrome P450 113A1; 100.0 2.2E-61 7.6E-66 459.5 30.9 390 25-492 14-406 (411)
39 4fb2_A P450CIN; heme, monooxyg 100.0 4.1E-61 1.4E-65 456.0 31.6 373 46-492 16-393 (398)
40 3dsk_A Cytochrome P450 74A, ch 100.0 6E-63 2E-67 483.9 19.4 420 24-465 22-472 (495)
41 3abb_A CYP105D6, cytochrome P4 100.0 2.6E-61 9E-66 458.5 29.8 353 45-465 20-382 (408)
42 1odo_A Putative cytochrome P45 100.0 6.7E-61 2.3E-65 455.7 32.5 378 46-492 12-406 (408)
43 3ejb_B Biotin biosynthesis cyt 100.0 7.3E-61 2.5E-65 455.7 32.0 381 46-492 10-396 (404)
44 2y5n_A MYCG, P-450-like protei 100.0 8E-60 2.7E-64 448.3 36.3 354 46-465 34-395 (417)
45 1gwi_A CYP154C1, cytochrome P4 100.0 7.3E-61 2.5E-65 455.2 29.0 355 46-465 14-384 (411)
46 3tyw_A Putative cytochrome P45 100.0 6.7E-60 2.3E-64 450.2 35.6 355 45-465 25-389 (417)
47 2zwu_A Camphor 5-monooxygenase 100.0 1.1E-60 3.7E-65 453.9 29.2 368 25-465 6-387 (415)
48 2xkr_A CYP142, putative cytoch 100.0 1.1E-59 3.9E-64 446.1 35.5 375 48-493 17-395 (398)
49 3dan_A Cytochrome P450 74A2; A 100.0 9.9E-62 3.4E-66 472.9 21.2 403 26-465 5-454 (473)
50 2z36_A MOXA, cytochrome P450 t 100.0 1.2E-59 4.1E-64 446.8 34.6 369 27-465 4-385 (413)
51 2xbk_A PIMD protein; epoxidati 100.0 3.1E-59 1.1E-63 442.0 37.2 347 47-465 24-382 (404)
52 3nc3_A Cytochrome P450 CYPX; c 100.0 2.1E-60 7.1E-65 455.7 29.1 364 48-465 52-418 (441)
53 1z8o_A 6-deoxyerythronolide B 100.0 1.4E-59 4.9E-64 446.0 33.7 352 46-465 11-380 (404)
54 2dkk_A Cytochrome P450; CYP158 100.0 5E-60 1.7E-64 448.8 30.3 375 48-492 26-410 (411)
55 1q5d_A P450 epoxidase; cytochr 100.0 9E-60 3.1E-64 449.3 31.8 382 46-493 23-417 (419)
56 2uuq_A CYP130, cytochrome P450 100.0 5.6E-60 1.9E-64 449.3 29.6 374 48-493 24-414 (414)
57 3ivy_A Cytochrome P450 CYP125; 100.0 1.9E-59 6.6E-64 448.6 32.8 371 28-465 16-406 (433)
58 2z3t_A Cytochrome P450; monoxy 100.0 1.1E-59 3.7E-64 448.9 30.9 355 48-465 19-392 (425)
59 3oo3_A OXY protein; cytochrome 100.0 9.3E-59 3.2E-63 438.2 35.2 348 46-465 9-361 (384)
60 3buj_A CALO2; heme, iron, meta 100.0 2.9E-59 9.9E-64 443.1 31.7 351 48-465 12-371 (397)
61 3mgx_A Putative P450 monooxyge 100.0 1.9E-59 6.6E-64 445.0 29.9 373 48-492 36-415 (415)
62 3oft_A Cytochrome P450, CYP101 100.0 1.5E-59 5.1E-64 445.5 28.7 351 46-465 21-374 (396)
63 2wm5_A CYP124, putative cytoch 100.0 1.4E-58 4.9E-63 442.1 34.6 357 49-464 44-414 (435)
64 3lxh_A Cytochrome P450; heme, 100.0 5E-59 1.7E-63 444.8 29.8 377 48-492 37-417 (421)
65 1lfk_A OXYB, P450 monooxygenas 100.0 3.8E-59 1.3E-63 442.2 28.0 348 51-465 15-376 (398)
66 3tkt_A Cytochrome P450; aromat 100.0 3.5E-58 1.2E-62 441.8 34.9 361 51-463 47-426 (450)
67 1n40_A P450 MT2, cytochrome P4 100.0 1.7E-58 6E-63 437.0 30.3 349 46-465 13-374 (396)
68 3r9b_A Cytochrome P450 164A2; 100.0 7.6E-58 2.6E-62 437.0 29.9 360 46-465 26-395 (418)
69 3rwl_A Cytochrome P450 alkane 100.0 3.1E-57 1.1E-61 431.7 33.7 357 49-465 38-405 (426)
70 3p3o_A Cytochrome P450; monoox 100.0 6.7E-57 2.3E-61 428.7 27.4 367 36-465 22-394 (416)
71 2wiy_A XPLA-heme, cytochrome P 100.0 3.4E-56 1.2E-60 420.8 31.4 355 48-465 19-374 (394)
72 3b4x_A 367AA long hypothetical 100.0 4.7E-56 1.6E-60 415.7 27.0 333 51-464 1-345 (367)
73 2rfb_A Cytochrome P450; heme, 100.0 1.6E-55 5.5E-60 408.7 27.4 319 60-465 2-324 (343)
74 1io7_A Cytochrome P450 CYP119; 100.0 2.2E-55 7.5E-60 411.9 26.7 333 51-464 1-345 (368)
75 4dnj_A Putative cytochrome P45 100.0 3E-54 1E-58 409.3 30.2 365 35-465 17-390 (412)
76 4dxy_A Cytochrome P450, CYP101 100.0 9.9E-49 3.4E-53 370.3 32.7 354 48-465 36-393 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 9.6E-47 3.3E-51 348.3 1.3 313 31-465 35-361 (381)
78 1s79_A Lupus LA protein; RRM, 58.6 33 0.0011 24.1 6.5 50 40-91 15-72 (103)
79 1iqt_A AUF1, heterogeneous nuc 56.7 34 0.0011 21.9 6.0 42 51-92 12-62 (75)
80 2krb_A Eukaryotic translation 53.8 43 0.0015 21.9 6.8 39 52-90 21-66 (81)
81 2diu_A KIAA0430 protein; struc 53.0 54 0.0018 22.7 6.4 60 40-100 13-76 (96)
82 3lqv_A PRE-mRNA branch site pr 51.5 62 0.0021 22.9 7.7 58 31-90 3-66 (115)
83 3d2w_A TAR DNA-binding protein 47.1 47 0.0016 22.4 5.6 53 33-87 8-64 (89)
84 2mss_A Protein (musashi1); RNA 43.6 61 0.0021 20.6 6.1 41 51-91 12-61 (75)
85 2nlw_A Eukaryotic translation 40.2 91 0.0031 21.6 6.4 53 38-90 17-80 (105)
86 1x4c_A Splicing factor, argini 39.1 97 0.0033 21.6 7.1 50 39-90 18-69 (108)
87 3beg_B Splicing factor, argini 36.9 97 0.0033 22.0 6.2 58 38-97 18-78 (115)
88 2cqc_A Arginine/serine-rich sp 35.6 99 0.0034 20.7 6.5 58 31-90 10-76 (95)
89 1m46_B IQ4, IQ4 motif from MYO 33.8 35 0.0012 16.0 2.0 12 319-330 8-19 (26)
90 3s7r_A Heterogeneous nuclear r 30.6 78 0.0027 20.8 4.6 51 39-91 14-73 (87)
91 1x5p_A Negative elongation fac 30.2 1.3E+02 0.0044 20.4 6.5 49 38-90 17-68 (97)
92 4f25_A Polyadenylate-binding p 29.3 1.2E+02 0.004 21.5 5.6 49 40-90 9-64 (115)
93 1whx_A Hypothetical protein ri 28.1 1.6E+02 0.0053 20.7 6.4 57 40-98 14-74 (111)
94 2hvz_A Splicing factor, argini 27.5 1.4E+02 0.0049 20.2 5.7 40 51-90 13-56 (101)
95 1sjr_A Polypyrimidine tract-bi 26.9 1.9E+02 0.0064 22.4 6.5 49 40-90 50-103 (164)
96 2cpf_A RNA binding motif prote 26.5 1.4E+02 0.0046 20.2 5.4 49 40-90 9-69 (98)
97 4fxv_A ELAV-like protein 1; RN 26.1 1.5E+02 0.0051 20.3 5.5 49 40-90 23-80 (99)
98 1x4e_A RNA binding motif, sing 25.7 1.1E+02 0.0038 19.9 4.6 50 38-89 7-65 (85)
99 1sjq_A Polypyrimidine tract-bi 24.8 1.8E+02 0.0063 20.4 6.1 50 38-89 18-70 (105)
100 2d9o_A DNAJ (HSP40) homolog, s 24.7 1.5E+02 0.0052 20.5 5.2 39 52-90 31-73 (100)
101 2bz2_A Negative elongation fac 24.3 1.6E+02 0.0055 21.1 5.6 48 39-90 42-92 (121)
102 2rs2_A Musashi-1, RNA-binding 24.2 1.7E+02 0.0059 20.4 5.6 51 39-91 28-87 (109)
103 2x1f_A MRNA 3'-END-processing 24.1 1.7E+02 0.0057 19.6 6.6 49 40-90 6-63 (96)
104 1p27_B RNA-binding protein 8A; 23.9 1.8E+02 0.0061 19.9 6.4 50 39-90 26-84 (106)
105 2do4_A Squamous cell carcinoma 23.7 1.7E+02 0.006 19.7 6.8 51 38-90 19-77 (100)
106 2ywk_A Putative RNA-binding pr 23.6 1.6E+02 0.0054 19.7 5.2 50 39-90 19-76 (95)
107 2d9p_A Polyadenylate-binding p 23.3 1.8E+02 0.0062 19.8 6.9 62 32-95 11-80 (103)
108 2jwn_A Embryonic polyadenylate 23.2 1.3E+02 0.0043 21.6 4.9 45 51-95 49-102 (124)
109 1x4d_A Matrin 3; structural ge 23.2 1.4E+02 0.0048 20.8 4.8 56 33-89 12-70 (102)
110 2fy1_A RNA-binding motif prote 23.0 2E+02 0.007 20.3 6.4 55 40-96 11-74 (116)
111 1whw_A Hypothetical protein ri 22.7 1.8E+02 0.0062 19.6 6.6 49 40-90 12-69 (99)
112 1uaw_A Mouse-musashi-1; RNP-ty 22.6 1.5E+02 0.0052 18.6 5.1 41 51-91 13-62 (77)
113 2cq4_A RNA binding motif prote 22.6 1.4E+02 0.0049 20.9 5.0 51 40-92 29-88 (114)
114 2la6_A RNA-binding protein FUS 22.6 1.8E+02 0.0063 19.6 7.1 51 38-90 15-82 (99)
115 3v4m_A Splicing factor U2AF 65 22.5 2E+02 0.0068 20.0 5.9 44 53-96 30-85 (105)
116 2kxn_B Transformer-2 protein h 22.3 2.3E+02 0.0078 20.6 9.3 52 37-90 47-107 (129)
117 2e5h_A Zinc finger CCHC-type a 22.3 1.8E+02 0.0061 19.3 7.1 51 38-90 18-77 (94)
118 2ad9_A Polypyrimidine tract-bi 22.2 2.2E+02 0.0077 20.5 5.9 50 38-89 33-85 (119)
119 2jvo_A Nucleolar protein 3; nu 22.1 2E+02 0.007 20.0 5.6 49 40-90 35-84 (108)
120 1oo0_B CG8781-PA, drosophila Y 22.1 2E+02 0.0069 19.9 6.3 50 39-90 29-87 (110)
121 2dnm_A SRP46 splicing factor; 22.0 1.9E+02 0.0066 19.6 7.1 57 38-96 15-81 (103)
122 2cq3_A RNA-binding protein 9; 21.7 2E+02 0.0067 19.6 7.2 51 38-90 17-74 (103)
123 2dgs_A DAZ-associated protein 21.5 1.9E+02 0.0066 19.4 7.8 57 39-97 13-78 (99)
124 2jvr_A Nucleolar protein 3; RN 21.5 2.2E+02 0.0075 20.1 6.2 50 39-90 31-86 (111)
125 2kvi_A Nuclear polyadenylated 21.1 1.9E+02 0.0067 19.3 7.0 56 40-96 14-71 (96)
126 2pe8_A Splicing factor 45; RRM 20.9 1.4E+02 0.0047 20.9 4.4 62 35-96 7-82 (105)
127 2err_A Ataxin-2-binding protei 20.8 1.4E+02 0.0048 20.8 4.5 49 40-90 33-88 (109)
128 1x4g_A Nucleolysin TIAR; struc 20.7 2.2E+02 0.0074 19.7 6.6 49 40-90 29-80 (109)
129 1x4b_A Heterogeneous nuclear r 20.4 1.4E+02 0.0049 20.9 4.6 51 40-92 31-90 (116)
130 2dgv_A HnRNP M, heterogeneous 20.3 1.9E+02 0.0067 19.0 7.3 49 40-90 12-67 (92)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=1.3e-77 Score=587.68 Aligned_cols=458 Identities=27% Similarity=0.448 Sum_probs=365.8
Q ss_pred CCCCCCCCCCCCCCcccccccCCC--CCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLELGH--KPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPES 103 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~~~--~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~ 103 (494)
+++.+.||||+++|++||++.+.. +++..+.+|+++||+||++++|+.++|+|+||+++++++.++...|..++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 456778999999999999998853 567889999999999999999999999999999999999988888888776544
Q ss_pred ccccccCCCCcccccCChhHHHHHHHhhhccCCh--hHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHH
Q 011093 104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTS--QKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNL 181 (494)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~ 181 (494)
...+...+.+++++.+|+.|+.+|+++. +.|+. ..+..+.+.+.++++.+++.+.+ ..++++|+..++..+++|+
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dv 160 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNV 160 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHH
Confidence 4433333556667778999999999998 76763 44677889999999999999875 3567899999999999999
Q ss_pred HHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011093 182 LSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQE 261 (494)
Q Consensus 182 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 261 (494)
++.++||.+++.. ++....+.+....+........+.+++|++..++. ...++..+..+.+.+++++.++++.+..
T Consensus 161 i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 236 (494)
T 3swz_A 161 ISLICFNTSYKNG-DPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEKF-- 236 (494)
T ss_dssp HHHHHHSCCCCTT-CTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HHHHHcCCcCCCC-CHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 9999999998653 33334444444444445555566778888876632 2234455555666666666666554331
Q ss_pred cCCCCchhHHHHHhcccc------------CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 011093 262 HGFADSKDMLDTLLNISE------------SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELE 329 (494)
Q Consensus 262 ~~~~~~~d~~~~ll~~~~------------~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~ 329 (494)
..+...|+++.|++... ...++++++..++..+++||+|||+++++|++++|++||++|+++++||+
T Consensus 237 -~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~ 315 (494)
T 3swz_A 237 -RSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEID 315 (494)
T ss_dssp -CTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred -cccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 11135689999997542 13589999999999999999999999999999999999999999999999
Q ss_pred HhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCC
Q 011093 330 QKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFK 409 (494)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~ 409 (494)
++++.+..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+
T Consensus 316 ~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~ 395 (494)
T 3swz_A 316 QNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFM 395 (494)
T ss_dssp HHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCC
T ss_pred HhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCC
Confidence 99998888999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCC-CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccccc-ccccCCCCe
Q 011093 410 PERFLGSDVDVK-GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFG-ITLQKAQPL 487 (494)
Q Consensus 410 p~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 487 (494)
|+||+++++... .....|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++. ...+.....+ ...+..+.+
T Consensus 396 PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~p~~~~v 473 (494)
T 3swz_A 396 PERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDG--QLPSLEGIPKVVFLIDSFKV 473 (494)
T ss_dssp GGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSC--CCCCCSCEESSSEECCCCCE
T ss_pred cccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCC--CCCCCCCccceeecCCCcEE
Confidence 999997654321 234579999999999999999999999999999999999987652 1122322323 344566788
Q ss_pred eEeeee
Q 011093 488 RVVPVA 493 (494)
Q Consensus 488 ~~~~~~ 493 (494)
++++|.
T Consensus 474 ~~~~R~ 479 (494)
T 3swz_A 474 KIKVRQ 479 (494)
T ss_dssp EEEECH
T ss_pred EEEEcC
Confidence 888873
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-78 Score=596.71 Aligned_cols=460 Identities=23% Similarity=0.411 Sum_probs=356.5
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVG 105 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~ 105 (494)
+++.+.||||+++|++||++.+.++++.++.+|+++||+||++++|+.++++|+||+++++|+.++...|.+++......
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 84 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFR 84 (507)
T ss_dssp -----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHH
T ss_pred cCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHH
Confidence 45678899999999999999998889999999999999999999999999999999999999987777787766544333
Q ss_pred ccccCCCCcccccCChhHHHHHHHhhhccCChhH------HhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHH
Q 011093 106 SIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQK------LDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVV 179 (494)
Q Consensus 106 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~------l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~ 179 (494)
... .+.+++++.+|+.|+.+|+.++ +.|+... ++.+.+.+.++++.+++.+.+...+++++|+.+++..+++
T Consensus 85 ~~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~ 162 (507)
T 3pm0_A 85 VVS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVA 162 (507)
T ss_dssp HGG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHH
T ss_pred hhc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHH
Confidence 222 3556667778999999999998 5544322 2348889999999999999876556788999999999999
Q ss_pred HHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChh--hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 180 NLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQ--GVRRRLTRHYIKILEVLDRFIDQRLE 257 (494)
Q Consensus 180 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~ 257 (494)
|+++.++||.+++..+ .....+.+.+..+........+..++|++..++.. ...++..+..+.+.+++.+.++++++
T Consensus 163 dvi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 241 (507)
T 3pm0_A 163 NVMSAVCFGCRYSHDD-PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCE 241 (507)
T ss_dssp HHHHHHHTSCCCCTTC-HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccCCCCC-HHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999987643 34455555566666555555566678887766322 13455666777788888888888776
Q ss_pred HHhhcCCCCchhHHHHHhccccC----------CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHH
Q 011093 258 QRQEHGFADSKDMLDTLLNISES----------EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLE 327 (494)
Q Consensus 258 ~~~~~~~~~~~d~~~~ll~~~~~----------~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 327 (494)
..+. +. ...|+++.|++..+. ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|
T Consensus 242 ~~~~-~~-~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E 319 (507)
T 3pm0_A 242 SLRP-GA-APRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAE 319 (507)
T ss_dssp HCCT-TC-CCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cccc-cc-CCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 6432 12 456899999965321 14899999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCC
Q 011093 328 LEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYS 407 (494)
Q Consensus 328 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~ 407 (494)
|+++++++..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus 320 i~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~ 399 (507)
T 3pm0_A 320 LDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPEN 399 (507)
T ss_dssp HHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSS
T ss_pred HHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCc
Confidence 99999887889999999999999999999999999998788999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCCC-CccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccc-cCCC
Q 011093 408 FKPERFLGSDVDVKG-RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITL-QKAQ 485 (494)
Q Consensus 408 F~p~R~l~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 485 (494)
|+|+||++.++.... ....|+|||.|+|.|+|++||.+|++++++.||++|||++.++ ...++....+++. +...
T Consensus 400 F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~~~~~~~p~~~ 476 (507)
T 3pm0_A 400 FDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPN---EPAKMNFSYGLTIKPKSF 476 (507)
T ss_dssp CCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTT---CCSCCCEEESSSEEECSC
T ss_pred cCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCC---CCCCCCCCCCccccCCCc
Confidence 999999976543211 1247999999999999999999999999999999999999765 2334433344433 3345
Q ss_pred CeeEeeee
Q 011093 486 PLRVVPVA 493 (494)
Q Consensus 486 ~~~~~~~~ 493 (494)
.+++++|.
T Consensus 477 ~v~~~~R~ 484 (507)
T 3pm0_A 477 KVNVTLRE 484 (507)
T ss_dssp CEEEEESS
T ss_pred EEEEEEcc
Confidence 77777774
No 3
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=3e-77 Score=583.64 Aligned_cols=456 Identities=22% Similarity=0.404 Sum_probs=349.8
Q ss_pred CCCCCCCCCCCCCcccccccCC-CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccc
Q 011093 27 GSRKLPPGPTPLPIIGNLLELG-HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVG 105 (494)
Q Consensus 27 ~~~~~pp~p~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~ 105 (494)
+.++.||||+++|++||++++. .+++..+.+|++||||||++++|+.++|+|+||+++++|+.+++..|..++......
T Consensus 7 s~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~ 86 (479)
T 3tbg_A 7 SKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86 (479)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred CCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence 3457899999999999999884 677889999999999999999999999999999999999998888887776554444
Q ss_pred cccc--CCCCcccccCChhHHHHHHHhhhccCChhHHhh--cHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHH
Q 011093 106 SIQK--DEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDA--NQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNL 181 (494)
Q Consensus 106 ~~~~--~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~ 181 (494)
.... .+.+++++.+|+.|+.+|+.+. +.|+...+.. +...+......+...+.. ..++.+|+..++..+++++
T Consensus 87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~ 163 (479)
T 3tbg_A 87 ILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFAN--HSGRPFRPNGLLDKAVSNV 163 (479)
T ss_dssp GGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHHT--TTTCCBCTHHHHHHHHHHH
T ss_pred HhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHHh--ccCCcccHHHHHHHHHHHH
Confidence 3322 2345667788999999999998 6666555432 344555555566655543 3567899999999999999
Q ss_pred HHHHHhcccccccCcchHHHHHHHHHHHHHHhcCC--CccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 182 LSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRP--NLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 182 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
++.++||..++..+. ......+............ .....+|+...+ .....+.....+...+.+.+.+.+..+..
T Consensus 164 ~~~~~fg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (479)
T 3tbg_A 164 IASLTCGRRFEYDDP-RFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTEHRMTW 240 (479)
T ss_dssp HHHHHHSCCCCTTCH-HHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhcCCcccccch-hhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999876543 2333333333332222211 111122333222 22233444455556666666666666553
Q ss_pred hhcCCCCchhHHHHHhccc------cCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093 260 QEHGFADSKDMLDTLLNIS------ESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG 333 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~------~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 333 (494)
+... ...|+++.++... ....++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++++
T Consensus 241 ~~~~--~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~ 318 (479)
T 3tbg_A 241 DPAQ--PPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318 (479)
T ss_dssp CTTS--CCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred hccc--ccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHh
Confidence 3222 3445555554321 1256999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCc
Q 011093 334 KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERF 413 (494)
Q Consensus 334 ~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 413 (494)
.+..++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||
T Consensus 319 ~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRf 398 (479)
T 3tbg_A 319 QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398 (479)
T ss_dssp SSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGG
T ss_pred hccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCcccc
Confidence 88889999999999999999999999999999887788899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccc-cCCCCeeEeee
Q 011093 414 LGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITL-QKAQPLRVVPV 492 (494)
Q Consensus 414 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 492 (494)
++++++. .++..|+|||+|+|.|+|++||.+|++++++.||++|||+++++. ...+.....+++. +.+..++++||
T Consensus 399 l~~~~~~-~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~P~~~~v~~~pR 475 (479)
T 3tbg_A 399 LDAQGHF-VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ--PRPSHHGVFAFLVSPSPYELCAVPR 475 (479)
T ss_dssp BCTTCCB-CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTS--CCCCSCEEESSSEEECCCCBEEEEC
T ss_pred CCCCccc-CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCC--CCccccccceeeecCCCeEEEEEEC
Confidence 9876543 244589999999999999999999999999999999999997762 1122333344433 34567888887
Q ss_pred e
Q 011093 493 A 493 (494)
Q Consensus 493 ~ 493 (494)
.
T Consensus 476 s 476 (479)
T 3tbg_A 476 H 476 (479)
T ss_dssp -
T ss_pred C
Confidence 4
No 4
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=2e-76 Score=578.38 Aligned_cols=453 Identities=25% Similarity=0.451 Sum_probs=358.0
Q ss_pred CCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccccc
Q 011093 28 SRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSI 107 (494)
Q Consensus 28 ~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 107 (494)
+.+.+|||+++|++|+++.+.++++..+.+++++||+||++++|+.++++|+||+++++|+.+++..|.+++........
T Consensus 14 ~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~ 93 (495)
T 2hi4_A 14 GLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI 93 (495)
T ss_dssp TCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS
T ss_pred CCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh
Confidence 34445999999999999888778899999999999999999999999999999999999998766667665433222212
Q ss_pred ccCCCCcccc-cCChhHHHHHHHhhhccCC---hhHH---h---hcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHH
Q 011093 108 QKDEYGIPWL-PVSTKWKKLRKICNLHIFT---SQKL---D---ANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDT 177 (494)
Q Consensus 108 ~~~~~~~~~~-~~~~~w~~~R~~~~~~~f~---~~~l---~---~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~ 177 (494)
..+.+++++ .+|+.|+++|+++. +.|+ ..++ + .+.+.+.++++.+++.+.+.+.+++++|+.+++..+
T Consensus 94 -~~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~ 171 (495)
T 2hi4_A 94 -TDGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVS 171 (495)
T ss_dssp -TTSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHH
T ss_pred -cCCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHH
Confidence 124455555 47999999999998 6543 3322 2 688999999999999998754466789999999999
Q ss_pred HHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 178 VVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLE 257 (494)
Q Consensus 178 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 257 (494)
++|+++.++||.+++.. +++...+.+....+...........++|++.+++. ...++..+..+.+.+++.+.++++++
T Consensus 172 ~~dvi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~ 249 (495)
T 2hi4_A 172 VANVIGAMCFGQHFPES-SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQKTVQEHYQ 249 (495)
T ss_dssp HHHHHHHHHHGGGSCTT-CHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCC-CHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988643 32334444444444433222234556787765532 23345666777788888888887765
Q ss_pred HHhhcCCCCchhHHHHHhcccc------CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Q 011093 258 QRQEHGFADSKDMLDTLLNISE------SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQK 331 (494)
Q Consensus 258 ~~~~~~~~~~~d~~~~ll~~~~------~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~ 331 (494)
..+ .. ...|+++.|++... +..++++++.+++.++++||+|||+++++|++++|++||++|++|++||+++
T Consensus 250 ~~~--~~-~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v 326 (495)
T 2hi4_A 250 DFD--KN-SVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTV 326 (495)
T ss_dssp TCC--TT-CCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred hhc--cc-ccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHh
Confidence 422 11 34689999996421 1358999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCC
Q 011093 332 VGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPE 411 (494)
Q Consensus 332 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~ 411 (494)
++++..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+
T Consensus 327 ~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~Pe 406 (495)
T 2hi4_A 327 IGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPE 406 (495)
T ss_dssp TTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCCGG
T ss_pred cCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccCcc
Confidence 98777789999999999999999999999999977889999999999999999999999999999999999999999999
Q ss_pred CccCCCCC-C-CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccccccccc-CCC-Ce
Q 011093 412 RFLGSDVD-V-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQ-KAQ-PL 487 (494)
Q Consensus 412 R~l~~~~~-~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 487 (494)
||++.+++ . ......|+|||.|+|.|+|++||.+|++++++.|+++|++++.++. ..++....+++.. ... .+
T Consensus 407 Rfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~~~~~v 483 (495)
T 2hi4_A 407 RFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV---KVDLTPIYGLTMKHARCEHV 483 (495)
T ss_dssp GGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTC---CCCCCCBCSSSCBCCCCCCB
T ss_pred cccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCC---CCCccccCCceecCCCcceE
Confidence 99975432 1 0123579999999999999999999999999999999999987652 2233333344333 334 56
Q ss_pred eEe
Q 011093 488 RVV 490 (494)
Q Consensus 488 ~~~ 490 (494)
+++
T Consensus 484 ~~~ 486 (495)
T 2hi4_A 484 QAR 486 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 666
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=2.8e-76 Score=577.27 Aligned_cols=451 Identities=22% Similarity=0.376 Sum_probs=357.1
Q ss_pred hhccCCCCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccC
Q 011093 22 RSFSKGSRKLPPGPTPLPIIGNLLELG-----HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLC 96 (494)
Q Consensus 22 ~~~~~~~~~~pp~p~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~ 96 (494)
+....++.+.+|||+++|++||++.+. ++++..+.+|+++||+||++++|+.++|+|+||+++++|+.++ ..|.
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~ 94 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHP 94 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCC
Confidence 334467888899999999999998772 3567889999999999999999999999999999999999864 4566
Q ss_pred CCCCcccc---cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhcc-CCCceehhH
Q 011093 97 NRNVPESV---GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCR-TGEPIDVGQ 172 (494)
Q Consensus 97 ~~~~~~~~---~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~ 172 (494)
+++..... ......+.++ +..+|+.|+++||.+...+++.+.++.+.+.+.++++.+++.+.+..+ +++++|+.+
T Consensus 95 ~r~~~~~~~~~~~~~~~~~~l-~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~ 173 (482)
T 3k9v_A 95 QRLEIKPWKAYRDHRNEAYGL-MILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYS 173 (482)
T ss_dssp CCCCCHHHHHHHHHHTCCCCT-TTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHH
T ss_pred CCCCchHHHHHHHhcCCCCCc-eeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Confidence 55432211 1111123444 556799999999999844458888999999999999999999987643 467899999
Q ss_pred HHHHHHHHHHHHHHhcccccccCc---chHHHHHHHHHHHHHHhcCCCcccccc--ccccCChhhHHHHHHHHHHHHHHH
Q 011093 173 AAFDTVVNLLSNSIFSVDLADANS---DSAREFKDSMWGLMVEAGRPNLSDFFP--MLRKLDIQGVRRRLTRHYIKILEV 247 (494)
Q Consensus 173 ~~~~~~~~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~~~~~~~~~~~~~~~~~~~~~ 247 (494)
++..+++|+++.++||.+++..++ ....++.+.+..+...... ...+| +..++. ....+...+..+.+.++
T Consensus 174 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~-~~~~~~~~~~~~~~~~~ 249 (482)
T 3k9v_A 174 ELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVELHKRLN-TKVWQAHTLAWDTIFKS 249 (482)
T ss_dssp HHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHHT-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhcC-CHHHHHHHHHHHHHHHH
Confidence 999999999999999999854331 2335666666655433221 11222 112221 12233445566677777
Q ss_pred HHHHHHHHHHHHhhcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHH
Q 011093 248 LDRFIDQRLEQRQEHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLE 327 (494)
Q Consensus 248 ~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 327 (494)
+++.+++++++.. .+ ...|+++.+++. ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|
T Consensus 250 ~~~~i~~r~~~~~-~~--~~~d~l~~ll~~---~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~E 323 (482)
T 3k9v_A 250 VKPCIDNRLQRYS-QQ--PGADFLCDIYQQ---DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQE 323 (482)
T ss_dssp HHHHHHHHHHHTT-TC--TTSCHHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-cC--CchHHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 8888888776533 11 345788888865 46999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCC
Q 011093 328 LEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYS 407 (494)
Q Consensus 328 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~ 407 (494)
|+++++++..++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus 324 i~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 402 (482)
T 3k9v_A 324 VQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHK 402 (482)
T ss_dssp HHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTS
T ss_pred HHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCc
Confidence 99999887789999999999999999999999999997 68999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCe
Q 011093 408 FKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPL 487 (494)
Q Consensus 408 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (494)
|+||||++.+.+ .....|+|||.|+|.|+|++||.+|+++++++|+++|++++.++ .+++... ..+..|..++
T Consensus 403 F~PeRfl~~~~~--~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~---~~~~~~~--~~~~~p~~~~ 475 (482)
T 3k9v_A 403 FRPERWLQKEKK--INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDN---EPVEMLH--LGILVPSREL 475 (482)
T ss_dssp CCGGGGTCTTSC--CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCC---CCCCEEE--SSSEEESSSC
T ss_pred cCccccCCCCCC--CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCC---CCccccc--ceeecCCCCc
Confidence 999999976532 34568999999999999999999999999999999999998765 3344432 3344445444
Q ss_pred eEeee
Q 011093 488 RVVPV 492 (494)
Q Consensus 488 ~~~~~ 492 (494)
.++.+
T Consensus 476 ~~~~~ 480 (482)
T 3k9v_A 476 PIAFR 480 (482)
T ss_dssp CEEEE
T ss_pred ceEEe
Confidence 44433
No 6
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=9.9e-76 Score=572.25 Aligned_cols=453 Identities=26% Similarity=0.429 Sum_probs=361.4
Q ss_pred CCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLEL-GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV 104 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 104 (494)
+++.+.||||+++|++||++++ ..+++..+.+|+++||+||++++|+.++++|+||+++++|+.++...|.+++.....
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 4567889999999999999998 567889999999999999999999999999999999999999877777766554444
Q ss_pred cccccCCCCcccccCChhHHHHHHHhhhccCChhHH--hhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093 105 GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKL--DANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL 182 (494)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~ 182 (494)
.... +.+ ++..+|+.|+++|+... +.|....+ ..+.+.+.++++.+++.+.+. .++++|+.+++..+++|++
T Consensus 86 ~~~~--~~~-l~~~~g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~dvi 159 (476)
T 3e6i_A 86 HAHR--DRG-IIFNNGPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKT--QGQPFDPTFLIGCAPCNVI 159 (476)
T ss_dssp GGGT--TSS-STTCCSTTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHTHHHHHHH
T ss_pred heec--CCC-EEecCCcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHh--CCCCcChHHHHHHHHHHHH
Confidence 3332 224 45567999999999876 55544332 345688889999999998752 4678999999999999999
Q ss_pred HHHHhcccccccCcchHHHHHHHHHHHHHHhcCC--Ccccccc-ccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGRP--NLSDFFP-MLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
+.++||.+++..+ .....+.+.+...+...... .+...+| ++.+++ ...++..+..+.+.+++.+.++++++..
T Consensus 160 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (476)
T 3e6i_A 160 ADILFRKHFDYND-EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQSL 236 (476)
T ss_dssp HHHHHSCCCCTTC-HHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCCCCCC-HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999987643 23445555555544433321 1223445 444432 2345566677778888888888776643
Q ss_pred hhcCCCCchhHHHHHhccccC------CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093 260 QEHGFADSKDMLDTLLNISES------EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG 333 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~~~------~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 333 (494)
+ .. ...|+++.|+....+ ..++++++.++++.+++||+|||+++++|++++|++||++|++|++||+++++
T Consensus 237 ~--~~-~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~ 313 (476)
T 3e6i_A 237 D--PN-CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIG 313 (476)
T ss_dssp C--TT-SCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred C--CC-CCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcC
Confidence 2 11 345899998875432 34899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCc
Q 011093 334 KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERF 413 (494)
Q Consensus 334 ~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 413 (494)
++..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||
T Consensus 314 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~ 393 (476)
T 3e6i_A 314 PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF 393 (476)
T ss_dssp TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGG
T ss_pred CCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhh
Confidence 77788999999999999999999999999997788999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccc-ccc-cccCCCCeeEee
Q 011093 414 LGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEK-FGI-TLQKAQPLRVVP 491 (494)
Q Consensus 414 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~ 491 (494)
+++++... ....|+|||.|+|.|+|++||.+|++++++.|+++|+|++..+. ..++.... .++ ..+...+++++|
T Consensus 394 l~~~~~~~-~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~ 470 (476)
T 3e6i_A 394 LNENGKFK-YSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDP--KDIDLSPIHIGFGCIPPRYKLCVIP 470 (476)
T ss_dssp BCTTSSBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCT--TTCCCSCSEESSSEECCCCCEEEEE
T ss_pred cCCCCCcc-CccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCC--CCCCCCcccCccccCCCCeEEEEEe
Confidence 97654322 34579999999999999999999999999999999999985432 23444332 233 456778888888
Q ss_pred ee
Q 011093 492 VA 493 (494)
Q Consensus 492 ~~ 493 (494)
|.
T Consensus 471 R~ 472 (476)
T 3e6i_A 471 RS 472 (476)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 7
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=4.4e-76 Score=573.45 Aligned_cols=454 Identities=23% Similarity=0.422 Sum_probs=352.5
Q ss_pred CCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLEL-GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV 104 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 104 (494)
++..+.||||+++|++||++.+ ..+++..+.+++++||+||++++|+.++++|+||+++++|+.++...|.+++.....
T Consensus 6 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 1po5_A 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVV 85 (476)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGG
T ss_pred cCCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 4555789999999999999988 577899999999999999999999999999999999999997666666654432222
Q ss_pred cccccCCCCcccccCChhHHHHHHHhhhccCChh--HHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093 105 GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQ--KLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL 182 (494)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~ 182 (494)
.... .+.++ +..+|+.|+++|+++. +.|+.. .++.+.+.+.++++.+++.+.+. .++++|+.+++..+++|++
T Consensus 86 ~~~~-~~~~l-~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi 160 (476)
T 1po5_A 86 DPIF-QGYGV-IFANGERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKS--KGALLDNTLLFHSITSNII 160 (476)
T ss_dssp CSCC-SSCCC-CCSSHHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHH
T ss_pred Hhhc-CCCce-EecCCcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHH
Confidence 2221 23454 4458999999999987 777766 45678899999999999999763 4578999999999999999
Q ss_pred HHHHhcccccccCcchHHHHHHHHHHHHHHhcCC--Cccccccc-cccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGRP--NLSDFFPM-LRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
+.++||.+++..+ .....+.+.+.......... .+...+|+ ++.+ +...++..+..+.+.+++.+.++++++..
T Consensus 161 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 237 (476)
T 1po5_A 161 CSIVFGKRFDYKD-PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF--PGTHRQIYRNLQEINTFIGQSVEKHRATL 237 (476)
T ss_dssp HHHHHSSCCCTTC-HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTS--SCSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCCCCCCC-HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999886432 23333433333322111100 11224554 2332 12224555667777888888887776532
Q ss_pred hhcCCCCchhHHHHHhcccc------CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093 260 QEHGFADSKDMLDTLLNISE------SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG 333 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~~------~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 333 (494)
+ .. ...|+++.|++... +..++++++.+++.++++||+|||+++++|++++|++||++|++|++||+++++
T Consensus 238 ~--~~-~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~ 314 (476)
T 1po5_A 238 D--PS-NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314 (476)
T ss_dssp C--TT-SCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred C--CC-CcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 1 11 34689999886432 134889999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCc
Q 011093 334 KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERF 413 (494)
Q Consensus 334 ~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 413 (494)
.+..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||
T Consensus 315 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~ 394 (476)
T 1po5_A 315 SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394 (476)
T ss_dssp SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGG
T ss_pred CCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhh
Confidence 77778999999999999999999999999997678999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccc-ccccccc-CCCCeeEee
Q 011093 414 LGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEE-KFGITLQ-KAQPLRVVP 491 (494)
Q Consensus 414 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~ 491 (494)
++.+++.. ....|+|||.|+|.|+|++||.+|++++++.|+++|++++.++.. ..+... ..+++.. ....+.+++
T Consensus 395 l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p~~~~v~~~~ 471 (476)
T 1po5_A 395 LDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPE--DIDLTPRESGVGNVPPSYQIRFLA 471 (476)
T ss_dssp BCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGG--GCCCCCCSTTSSCCCCCCCBEEEE
T ss_pred CCCCCCcc-CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCC--CCCccCCcCceeecCcceEEEEEe
Confidence 97553322 345799999999999999999999999999999999999876521 112222 2233333 445566666
Q ss_pred ee
Q 011093 492 VA 493 (494)
Q Consensus 492 ~~ 493 (494)
|.
T Consensus 472 R~ 473 (476)
T 1po5_A 472 RH 473 (476)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 8
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1.1e-75 Score=571.07 Aligned_cols=454 Identities=26% Similarity=0.436 Sum_probs=348.3
Q ss_pred CCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLEL-GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV 104 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 104 (494)
++..+.||||+++|++|+++.+ ..+++..+.+++++||+||++++|+.++++|+||+++++|+.++...|.+++.....
T Consensus 7 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~ 86 (477)
T 1r9o_A 7 SGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLA 86 (477)
T ss_dssp --CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCC
T ss_pred cCCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhh
Confidence 4455689999999999999988 456788999999999999999999989999999999999997666666655432222
Q ss_pred cccccCCCCcccccCChhHHHHHHHhhhccCChh--HHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093 105 GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQ--KLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL 182 (494)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~ 182 (494)
.... .+.++ +..+|+.|+++|+.+. +.|+.. .++.+.+.+.++++.+++.+.+. .++++|+.+++..+++|++
T Consensus 87 ~~~~-~~~~l-~~~~g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi 161 (477)
T 1r9o_A 87 ERAN-RGFGI-VFSNGKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKT--KASPCDPTFILGCAPCNVI 161 (477)
T ss_dssp CTTT-CTTSS-TTCCHHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHHHHHHHHH
T ss_pred hhcc-CCCce-EecCChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHH
Confidence 2221 23454 4457999999999987 777765 44678899999999999999752 3578999999999999999
Q ss_pred HHHHhcccccccCcchHHHHHHHHHHHHHHhcCC--Ccccccccc-ccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGRP--NLSDFFPML-RKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
+.++||.+++..+ .....+.+.+.......... .+...+|++ +.+ +...++..+..+.+.+++.+.++++++..
T Consensus 162 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--p~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 238 (477)
T 1r9o_A 162 CSIIFHKRFDYKD-QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF--PGTHNKLLKNVAFMKSYILEKVKEHQESM 238 (477)
T ss_dssp HHHHHSCCCCTTC-HHHHHHHHHHHHHHHHHTCCBC-------CCCSCC--TTCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHccCcCCCCC-HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999986433 23455555555544332211 233456653 332 22224556667778888888888776542
Q ss_pred hhcCCCCchhHHHHHhcccc------CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093 260 QEHGFADSKDMLDTLLNISE------SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG 333 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~~------~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 333 (494)
+ .. ...|+++.|++... +..++++++.+++.++++||+|||+++++|++++|++||++|++|++||+++++
T Consensus 239 ~--~~-~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 315 (477)
T 1r9o_A 239 D--MN-NPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG 315 (477)
T ss_dssp C--TT-CCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred C--CC-CchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence 1 11 34689999886422 245899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCc
Q 011093 334 KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERF 413 (494)
Q Consensus 334 ~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 413 (494)
++..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||
T Consensus 316 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~ 395 (477)
T 1r9o_A 316 RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF 395 (477)
T ss_dssp SSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGG
T ss_pred CCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccce
Confidence 77778999999999999999999999999997678999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccc-ccccccc-CCCCeeEee
Q 011093 414 LGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEE-KFGITLQ-KAQPLRVVP 491 (494)
Q Consensus 414 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~ 491 (494)
++.+++.. ....|+|||.|+|.|+|++||.+|++++++.|+++|++++.++.. ..+... ..+++.. ....+.+++
T Consensus 396 l~~~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~ 472 (477)
T 1r9o_A 396 LDEGGNFK-KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPK--NLDTTPVVNGFASVPPFYQLCFIP 472 (477)
T ss_dssp BCTTSCBC-CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCCCBCCSSSCBCCCCCEEEEE
T ss_pred ECCCCCcC-ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCC--CCCccCCcCceeecCCCeEEEEEE
Confidence 97553322 345799999999999999999999999999999999999876521 112222 2233333 345566666
Q ss_pred ee
Q 011093 492 VA 493 (494)
Q Consensus 492 ~~ 493 (494)
|.
T Consensus 473 R~ 474 (477)
T 1r9o_A 473 IH 474 (477)
T ss_dssp CC
T ss_pred ec
Confidence 53
No 9
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=6e-76 Score=572.64 Aligned_cols=453 Identities=24% Similarity=0.407 Sum_probs=360.9
Q ss_pred CCCCCCCCCCCCCcccccccCCCC---CcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccc
Q 011093 27 GSRKLPPGPTPLPIIGNLLELGHK---PHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPES 103 (494)
Q Consensus 27 ~~~~~pp~p~~~p~lG~~~~~~~~---~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~ 103 (494)
++.+.||||+++|++|++..+..+ ++..+.+++++||+||++++|+.++++|+||+++++|+.+++..|.+++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 456789999999999999877433 78899999999999999999999999999999999999877666766553322
Q ss_pred ccccccCCCCcccccCChhHHHHHHHhhhccCChhHH--hhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHH
Q 011093 104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKL--DANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNL 181 (494)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~ 181 (494)
...+. .+.++++..+|+.|+++|+++. +.|+...+ ..+.+.+.++++.+++.+.+. +++++|+.+++..+++|+
T Consensus 89 ~~~~~-~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~v 164 (481)
T 3czh_A 89 FMKMT-KMGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETY--KGRPFDFKQLITNAVSNI 164 (481)
T ss_dssp HHHHH-TTCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT--TTCCBCCHHHHHHHHHHH
T ss_pred HHhhc-CCCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHH
Confidence 22221 2335556678999999999998 77776543 568899999999999999752 456899999999999999
Q ss_pred HHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCC--ccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 182 LSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPN--LSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 182 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
++.++||.+++.. +++..++.+.+........... +...+|++.+++. ...++..+..+.+.+++.+.++++++..
T Consensus 165 i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 242 (481)
T 3czh_A 165 TNLIIFGERFTYE-DTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNR 242 (481)
T ss_dssp HHHHHHSSCCCTT-CHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCCCCC-CHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999988643 3344555555555544332211 3345677654421 2334556667778888888887776532
Q ss_pred hhcCCCCchhHHHHHhcccc------CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093 260 QEHGFADSKDMLDTLLNISE------SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG 333 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~~------~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 333 (494)
+ .. ...|+++.|++... ...++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++++
T Consensus 243 ~--~~-~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 319 (481)
T 3czh_A 243 K--PQ-LPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG 319 (481)
T ss_dssp C--TT-CCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred C--CC-chHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcC
Confidence 1 11 34689999997632 135899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCc
Q 011093 334 KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERF 413 (494)
Q Consensus 334 ~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 413 (494)
++..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||
T Consensus 320 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~ 399 (481)
T 3czh_A 320 PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERF 399 (481)
T ss_dssp SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGG
T ss_pred CCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCce
Confidence 77789999999999999999999999999997678999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccc-cccCCCCeeEeee
Q 011093 414 LGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGI-TLQKAQPLRVVPV 492 (494)
Q Consensus 414 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 492 (494)
++.++.. .....|+|||.|+|.|+|++||.+|++++++.|+++|++++.++. ..+.....++ ..+....+.++||
T Consensus 400 l~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~ 475 (481)
T 3czh_A 400 LDSSGYF-AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHEL---VPDLKPRLGMTLQPQPYLICAERR 475 (481)
T ss_dssp BCTTSCB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGC---CCCCCCCSSSSCCCCCCCBEEEEC
T ss_pred eCCCCCC-cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCC---CCCcccCCCceecCCceEEEEEec
Confidence 9754321 234579999999999999999999999999999999999986542 2222222233 4456677888876
No 10
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=9.8e-76 Score=571.01 Aligned_cols=454 Identities=23% Similarity=0.424 Sum_probs=358.2
Q ss_pred CCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLEL-GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV 104 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 104 (494)
+++.+.||||+++|++||++.+ ..+++.++.+++++||+||++++|+.++++|+||+++++|+.++...|.+++.....
T Consensus 6 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 2fdv_A 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATF 85 (476)
T ss_dssp --CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHH
T ss_pred cccCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHH
Confidence 4455789999999999999988 567889999999999999999999999999999999999997666666654432222
Q ss_pred cccccCCCCcccccCChhHHHHHHHhhhccCChhHH--hhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093 105 GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKL--DANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL 182 (494)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~ 182 (494)
.... .+.++ +..+|+.|+++|+.+. +.|+...+ +.+.+.+.++++.+++.+.+. .++++|+.+++..+++|++
T Consensus 86 ~~~~-~~~~l-~~~~g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi 160 (476)
T 2fdv_A 86 DWVF-KGYGV-VFSNGERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGT--GGANIDPTFFLSRTVSNVI 160 (476)
T ss_dssp HHHH-TTCSS-SSCCHHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHH
T ss_pred hhhc-CCCCe-EecCchHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHH
Confidence 2121 24454 4457999999999998 78887666 778999999999999999753 4578999999999999999
Q ss_pred HHHHhcccccccCcchHHHHHHHHHHHHHHhcCC--Cccccccc-cccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGRP--NLSDFFPM-LRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
+.++||.+++.. +.+..++.+.+.......... .+...+|+ +++++ ...++..+..+.+.+++.+.++++++..
T Consensus 161 ~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 237 (476)
T 2fdv_A 161 SSIVFGDRFDYK-DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHNQRTL 237 (476)
T ss_dssp HHHHHSSCCCTT-CHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCcCCCC-CHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999998743 224455555555554332211 12334565 33332 2234556667777888888887765432
Q ss_pred hhcCCCCchhHHHHHhcccc------CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093 260 QEHGFADSKDMLDTLLNISE------SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG 333 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~~------~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 333 (494)
+ .. ...|+++.|++... +..++++++.+++.++++||+|||+++++|++++|++||++|++|++||+++++
T Consensus 238 ~--~~-~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~ 314 (476)
T 2fdv_A 238 D--PN-SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG 314 (476)
T ss_dssp C--TT-SCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred C--CC-CCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhc
Confidence 1 11 34699999997642 245899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCc
Q 011093 334 KGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERF 413 (494)
Q Consensus 334 ~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 413 (494)
++..++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||
T Consensus 315 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~ 394 (476)
T 2fdv_A 315 KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394 (476)
T ss_dssp SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGG
T ss_pred CCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhh
Confidence 76778999999999999999999999999996678999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccc-ccccccc-CCCCeeEee
Q 011093 414 LGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEE-KFGITLQ-KAQPLRVVP 491 (494)
Q Consensus 414 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~ 491 (494)
++.+++.. ....|+|||.|+|.|+|++||.+|++++++.|+++|++++.++.. ..+... ..+++.. ....+.+++
T Consensus 395 l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p~~~~v~~~~ 471 (476)
T 2fdv_A 395 LNEKGQFK-KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPK--DIDVSPKHVGFATIPRNYTMSFLP 471 (476)
T ss_dssp BCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCSCSEESSSEECCCCCEEEEE
T ss_pred CCCCCCCC-CCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCC--CCCccccccceeecCCceEEEEEe
Confidence 97553322 345799999999999999999999999999999999999976521 122322 2343333 345566666
Q ss_pred ee
Q 011093 492 VA 493 (494)
Q Consensus 492 ~~ 493 (494)
|.
T Consensus 472 R~ 473 (476)
T 2fdv_A 472 RH 473 (476)
T ss_dssp C-
T ss_pred cc
Confidence 53
No 11
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=3.8e-77 Score=583.45 Aligned_cols=451 Identities=26% Similarity=0.384 Sum_probs=343.6
Q ss_pred CCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhc-CcccCCCCCcccccc
Q 011093 28 SRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDH-DKSLCNRNVPESVGS 106 (494)
Q Consensus 28 ~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~-~~~~~~~~~~~~~~~ 106 (494)
.++.||||+++|++||++.+.++++.++.+|+++||+||++++|+.++|+|+||+++++|+.++ ...|..++......
T Consensus 12 k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~- 90 (485)
T 3nxu_A 12 KKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG- 90 (485)
T ss_dssp HHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG-
T ss_pred hhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc-
Confidence 3456899999999999999988889999999999999999999999999999999999999876 45565554332222
Q ss_pred cccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHH
Q 011093 107 IQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSI 186 (494)
Q Consensus 107 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~ 186 (494)
.. +.+ ++..+|+.|+++|+.++ +.|+.++++.+.+.+.+.++.+++.+.+...+++++|+.+++..+++|+++.++
T Consensus 91 ~~--~~~-l~~~~g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~ 166 (485)
T 3nxu_A 91 FM--KSA-ISIAEDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTS 166 (485)
T ss_dssp GG--GGS-TTTCCHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHH
T ss_pred cc--ccC-ccccCCcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHH
Confidence 11 223 45668999999999998 899999999999999999999999997765567899999999999999999999
Q ss_pred hcccccccCcchHHHHHHHHHHHHHHhcCC---CccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011093 187 FSVDLADANSDSAREFKDSMWGLMVEAGRP---NLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHG 263 (494)
Q Consensus 187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 263 (494)
||.+++..++.. ..+.+.+.......... .....+|++..+ ..... .....+...+.+.+.+++..+.+....
T Consensus 167 fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (485)
T 3nxu_A 167 FGVNIDSLNNPQ-DPFVENTKKLLRFDFLDPFFLSITVFPFLIPI-LEVLN--ICVFPREVTNFLRKSVKRMKESRLEDT 242 (485)
T ss_dssp HSCCCCGGGCTT-CHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHH-HHHTT--CCSSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCccccccCCC-cHHHHHHHHHhchhhHHHHHHHHHHhhhhHHH-HHHhh--hhhchHHHHHHHHHHHHHHHHHHHhcc
Confidence 999987643221 22332222211000000 001123322111 00000 000001222333333433333332222
Q ss_pred CCCchhHHHHHhccccC------CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCC
Q 011093 264 FADSKDMLDTLLNISES------EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNL 337 (494)
Q Consensus 264 ~~~~~d~~~~ll~~~~~------~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~ 337 (494)
.....|+++.|++...+ ..++++|+.+++..+++||+|||+++++|++++|++||++|++|++|++++++++..
T Consensus 243 ~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~ 322 (485)
T 3nxu_A 243 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 322 (485)
T ss_dssp ---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCC
T ss_pred CCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCC
Confidence 22456999999986432 458999999999999999999999999999999999999999999999999988788
Q ss_pred CCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCC
Q 011093 338 IEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSD 417 (494)
Q Consensus 338 ~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~ 417 (494)
++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++.+
T Consensus 323 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~ 401 (485)
T 3nxu_A 323 PTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 401 (485)
T ss_dssp CCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHH
T ss_pred CCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCc
Confidence 9999999999999999999999999987 789999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCe--eEeee
Q 011093 418 VDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPL--RVVPV 492 (494)
Q Consensus 418 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 492 (494)
... .....|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++. ..+.....+.+..|+.++ .+++|
T Consensus 402 ~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~r 474 (485)
T 3nxu_A 402 KDN-IDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKET---QIPLKLSLGGLLQPEKPVVLKVESR 474 (485)
T ss_dssp HTT-SCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTC---CSSCCBCSSSSCCBSSCCEEEEEEC
T ss_pred ccc-CCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCC---CCCcccCCCeeccCCCCeEEEEEEc
Confidence 221 234579999999999999999999999999999999999987652 223322333444554454 44454
No 12
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=2.2e-76 Score=579.77 Aligned_cols=444 Identities=24% Similarity=0.371 Sum_probs=347.2
Q ss_pred ccCCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc
Q 011093 24 FSKGSRKLPPGPTPLPIIGNLLEL-GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE 102 (494)
Q Consensus 24 ~~~~~~~~pp~p~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~ 102 (494)
+.+++.+.||||++ ++++ .++++..+.+|+++||+||++++|+.++++|+||+++++|+.++...|..++...
T Consensus 23 ~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~ 96 (496)
T 3qz1_A 23 WKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP 96 (496)
T ss_dssp ------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCT
T ss_pred hhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcc
Confidence 44567788999987 3344 5788999999999999999999999999999999999999988877787766544
Q ss_pred cccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHH
Q 011093 103 SVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLL 182 (494)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~ 182 (494)
.......+..+++++.+|+.|+++|+.++ +.|+.+.++.+.+.+.++++.+++.+.+ ..++++|+.+++..+++|++
T Consensus 97 ~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi 173 (496)
T 3qz1_A 97 SYKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSII 173 (496)
T ss_dssp TTTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHHT
T ss_pred hHHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHHH
Confidence 33333222225555545999999999998 7788777788999999999999999976 35678999999999999999
Q ss_pred HHHHhcccccccCcchHHHHHHHHHHHHHHhcC--CCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011093 183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGR--PNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQ 260 (494)
Q Consensus 183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 260 (494)
+.++||. .++.....+.+.+......... ..+..++|++.+++. ...++..+..+.+.+++.+.++++++..+
T Consensus 174 ~~~~fG~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 248 (496)
T 3qz1_A 174 CYLTFGN----KEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRHKESMV 248 (496)
T ss_dssp TTTSTTC----CCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHhcCC----CCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998 2222334444444433222211 123456777766532 33456677777888888888887766432
Q ss_pred hcCCCCchhHHHHHhccccCC-------CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhC
Q 011093 261 EHGFADSKDMLDTLLNISESE-------EIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVG 333 (494)
Q Consensus 261 ~~~~~~~~d~~~~ll~~~~~~-------~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 333 (494)
.+...|+++.|++...+. .++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++
T Consensus 249 ---~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 325 (496)
T 3qz1_A 249 ---AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELG 325 (496)
T ss_dssp ---SSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ---CCCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 114568999999875431 6899999999999999999999999999999999999999999999999998
Q ss_pred C----CCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCC
Q 011093 334 K----GNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFK 409 (494)
Q Consensus 334 ~----~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~ 409 (494)
+ +..+ .+++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+
T Consensus 326 ~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~ 404 (496)
T 3qz1_A 326 PGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFR 404 (496)
T ss_dssp SSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCC
T ss_pred CCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCC
Confidence 6 4456 8999999999999999999999999878899999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccc--ccccc-cCCCC
Q 011093 410 PERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEK--FGITL-QKAQP 486 (494)
Q Consensus 410 p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~ 486 (494)
|+||++++. . ..|+|||.|+|.|+|++||.+|++++++.|+++|++++.++. ...++... .+++. +....
T Consensus 405 PeR~l~~~~----~-~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 477 (496)
T 3qz1_A 405 PDRFLEPGA----N-PSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVG--ALPSLQPDPYCGVNLKVQPFQ 477 (496)
T ss_dssp CCCCC---C----C-CCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTC--CCCCSCCSCCCSSCCCCCCCC
T ss_pred cccccCCCC----C-cCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCC--CCCCCCcccCcceEecCCceE
Confidence 999997541 1 279999999999999999999999999999999999987542 12233222 23333 33455
Q ss_pred eeEeee
Q 011093 487 LRVVPV 492 (494)
Q Consensus 487 ~~~~~~ 492 (494)
+.+++|
T Consensus 478 v~~~~R 483 (496)
T 3qz1_A 478 VRLQPR 483 (496)
T ss_dssp CCCCCC
T ss_pred EEEEEe
Confidence 666665
No 13
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.7e-75 Score=574.46 Aligned_cols=445 Identities=18% Similarity=0.250 Sum_probs=353.2
Q ss_pred CCCCCCCCCCCCCCcccccccCCC----CCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLELGH----KPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVP 101 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~~~----~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~ 101 (494)
+++.+.||||+++|++||++++.. +.+..+.+|+++||+||++++|+.++|+|+||++++++++++ .|..++..
T Consensus 41 ~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~ 118 (503)
T 3s79_A 41 YEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGS 118 (503)
T ss_dssp ----CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCC
T ss_pred HhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchh
Confidence 446688999999999999988742 345688899999999999999999999999999999999643 45544332
Q ss_pred ccc-cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHH
Q 011093 102 ESV-GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVN 180 (494)
Q Consensus 102 ~~~-~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~ 180 (494)
... ......+.++++..+|+.|+++|+.++ +.|+...++.+.+.+.++++.+++.+.+..++++++|+.+++..++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~ 197 (503)
T 3s79_A 119 KLGLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLD 197 (503)
T ss_dssp HHHHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHH
T ss_pred hhhhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHH
Confidence 211 112223566777788999999999998 899999999999999999999998887654556789999999999999
Q ss_pred HHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011093 181 LLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQ 260 (494)
Q Consensus 181 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 260 (494)
+++.++||.+++.. +....+.+.+..+...... ..+++.+ +...++..+..+.+.+++.+.++++++..+
T Consensus 198 vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 267 (503)
T 3s79_A 198 TSNTLFLRIPLDES--AIVVKIQGYFDAWQALLIK---PDIFFKI-----SWLYKKYEKSVKDLKDAIEVLIAEKRRRIS 267 (503)
T ss_dssp HHHHHHTCCCCCHH--HHHHHHHHHHHHHHHHTTC---CHHHHHS-----GGGTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcccCch--hHHHHHHHHHHHHHHHhcC---cHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999987531 1222233333322222111 1111111 112345567778888899999988887655
Q ss_pred hcCC-CCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCC
Q 011093 261 EHGF-ADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIE 339 (494)
Q Consensus 261 ~~~~-~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~ 339 (494)
.+.. ++..|+++.|++..++.+++++++.+++..+++||+|||+++++|++++|++||++|+++++||+++++ +..++
T Consensus 268 ~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~~~ 346 (503)
T 3s79_A 268 TEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIK 346 (503)
T ss_dssp TCTTTTTTCCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-TSCCC
T ss_pred cccccchHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CCCCC
Confidence 3221 133499999998876678999999999999999999999999999999999999999999999999998 66789
Q ss_pred ccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCC
Q 011093 340 ESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVD 419 (494)
Q Consensus 340 ~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~ 419 (494)
.+++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|.++.+++||| ++|+||++|+|+||++..
T Consensus 347 ~~~~~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~-- 422 (503)
T 3s79_A 347 IDDIQKLKVMENFIYESMRYQPVVDLV-MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV-- 422 (503)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSCSSCCE-EEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC--
T ss_pred HHHHhcCHHHHHHHHhhhccCCCcccc-cccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC--
Confidence 999999999999999999999999985 5999999999999999999999999999998 999999999999998642
Q ss_pred CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCC-----CCeeEeeee
Q 011093 420 VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKA-----QPLRVVPVA 493 (494)
Q Consensus 420 ~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 493 (494)
....|+|||+|+|.|+|++||.+|++++++.|+++|+|++.++.... +.....+++..|. .++++++|.
T Consensus 423 ---~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~v~~~~R~ 496 (503)
T 3s79_A 423 ---PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVE--SIQKIHDLSLHPDETKNMLEMIFTPRN 496 (503)
T ss_dssp ---CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTT--TSCEEESSSEEECTTSCCCCEEEEECC
T ss_pred ---CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCcc--ccccccceeecCCCccceeeEEeccCC
Confidence 23479999999999999999999999999999999999998763222 3333334444443 457777774
No 14
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=1.2e-76 Score=575.06 Aligned_cols=416 Identities=20% Similarity=0.333 Sum_probs=340.1
Q ss_pred CCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccccc
Q 011093 29 RKLPPGPTP-LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSI 107 (494)
Q Consensus 29 ~~~pp~p~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 107 (494)
.+.||+|++ +|++||++++.+++++++.++++||||||++++|+.++|+|+||+++++++.+++..+..++........
T Consensus 10 ~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~ 89 (461)
T 3ld6_A 10 VKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP 89 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred CCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc
Confidence 356788775 9999999999889999999999999999999999999999999999999998877767665443222221
Q ss_pred ccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHh
Q 011093 108 QKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIF 187 (494)
Q Consensus 108 ~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~f 187 (494)
. .|.++++..+|+.|+.+|+.+. +.|+...++.+.+.+++.++.+++.+. .+..+|+.+.+..+++++++.++|
T Consensus 90 ~-~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~f 163 (461)
T 3ld6_A 90 V-FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWG----ESGEKNVFEALSELIILTASHCLH 163 (461)
T ss_dssp H-HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHHHT
T ss_pred c-CCCccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHHHHHHc
Confidence 1 2567777888999999999998 899999999999999999988888774 345789999999999999999999
Q ss_pred cccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 011093 188 SVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADS 267 (494)
Q Consensus 188 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 267 (494)
|.++.....+....+...+... .......+|.+.. ... ..+..++.+.+.+++.+.++++.. ..+ ..
T Consensus 164 G~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~-~~~~~~~~~~l~~~~~~~i~~r~~----~~~-~~ 230 (461)
T 3ld6_A 164 GKEIRSQLNEKVAQLYADLDGG-----FSHAAWLLPGWLP--LPS-FRRRDRAHREIKDIFYKAIQKRRQ----SQE-KI 230 (461)
T ss_dssp CHHHHHTCCHHHHHHHHHHHTT-----SSHHHHHSCTTSC--CHH-HHHHHHHHHHHHHHHHHHHHHHTT----CCC-CC
T ss_pred Ccchhhhhhhhhhhhhhhhhhh-----hhhHHHhhhhhcc--CcH-HHHHHHHHHHHHHHHHHHHHHHHh----cCC-CC
Confidence 9998765443333322222111 1111112232221 222 234455666666666666655533 232 56
Q ss_pred hhHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCC-CCCCccccC
Q 011093 268 KDMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKG-NLIEESDIT 344 (494)
Q Consensus 268 ~d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~ 344 (494)
.|+++.|++...+ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+++++++. ..++.++++
T Consensus 231 ~d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~ 310 (461)
T 3ld6_A 231 DDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLK 310 (461)
T ss_dssp CSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHH
T ss_pred cchhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHH
Confidence 6999999987654 5699999999999999999999999999999999999999999999999999864 456888999
Q ss_pred CChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCc
Q 011093 345 QLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRN 424 (494)
Q Consensus 345 ~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~ 424 (494)
+||||+|||+|+||++|+++. ..|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||+++++.. ..+
T Consensus 311 ~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~-~~~ 388 (461)
T 3ld6_A 311 DLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS-GEK 388 (461)
T ss_dssp TCHHHHHHHHHHHHHSCSCCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHH-HSS
T ss_pred HHhhhhheeeeccccCCchhc-cccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCccc-CCC
Confidence 999999999999999999987 569999999999999999999999999999999999999999999999865332 234
Q ss_pred cccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCC
Q 011093 425 FELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNE 465 (494)
Q Consensus 425 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~ 465 (494)
..|+|||+|+|.|+|++||.+|++++++.||++|||+++++
T Consensus 389 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~ 429 (461)
T 3ld6_A 389 FAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDG 429 (461)
T ss_dssp SSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTT
T ss_pred CccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCC
Confidence 57999999999999999999999999999999999999876
No 15
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=6.3e-74 Score=552.60 Aligned_cols=432 Identities=22% Similarity=0.269 Sum_probs=341.5
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVG 105 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~ 105 (494)
.++.+.||||+++|++||++.+..++. ++.+++++||+||+++++|.++++|+||+++++|+.+++..|.... .....
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~-~~~~~ 85 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATW-PLSTR 85 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEEC-CHHHH
T ss_pred CCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccch-hHHHH
Confidence 566788999999999999988766677 8889999999999999888899999999999999987655554221 11111
Q ss_pred ccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHH
Q 011093 106 SIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNS 185 (494)
Q Consensus 106 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~ 185 (494)
... +...++..+|+.|+++|+.+. +.|++++++.+.+.++++++.+++.|.+ ++++|+.+++..+++++++.+
T Consensus 86 ~~~--g~~~l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~vi~~~ 158 (444)
T 2ve3_A 86 ILL--GPNALATQMGEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWGK----ANEVIWYPQLRRMTFDVAATL 158 (444)
T ss_dssp HHH--CTTSGGGCCHHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHHH----SSEEEHHHHHHHHHHHHHHHH
T ss_pred HHh--CccccccCCchHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhcC----CCcEeHHHHHHHHHHHHHHHH
Confidence 111 232234568999999999998 8999999999999999999999999852 568999999999999999999
Q ss_pred HhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011093 186 IFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFA 265 (494)
Q Consensus 186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 265 (494)
+|| +....+ .++.+.+..+...... +...+|. . ..++..+..+.+.+++.+.+++++++ +.
T Consensus 159 ~fG-~~~~~~----~~~~~~~~~~~~~~~~--~~~~~p~------~-~~~~~~~~~~~~~~~~~~~i~~r~~~----~~- 219 (444)
T 2ve3_A 159 FMG-EKVSQN----PQLFPWFETYIQGLFS--LPIPLPN------T-LFGKSQRARALLLAELEKIIKARQQQ----PP- 219 (444)
T ss_dssp HTC-HHHHSC----TTHHHHHHHHHHHHSS--CCCCSTT------S-HHHHHHHHHHHHHHHHHHHHHHHHTS----CC-
T ss_pred HcC-CCcccH----HHHHHHHHHHHHHHhc--CCccCCC------c-HHHHHHHHHHHHHHHHHHHHHHHhcC----CC-
Confidence 999 433222 2333333333332211 1111121 1 12344556667777777777766542 22
Q ss_pred CchhHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCcccc
Q 011093 266 DSKDMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDI 343 (494)
Q Consensus 266 ~~~d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 343 (494)
...|+++.|++..++ ..++++++.++++.+++||+|||+++++|++++|++||++|++|++|++.++++. .++.+++
T Consensus 220 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l 298 (444)
T 2ve3_A 220 SEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETL 298 (444)
T ss_dssp CCSSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHH
T ss_pred CccCHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhh
Confidence 456999999987543 4689999999999999999999999999999999999999999999999998754 7899999
Q ss_pred CCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCC
Q 011093 344 TQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGR 423 (494)
Q Consensus 344 ~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~ 423 (494)
++||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||++.+.+....
T Consensus 299 ~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~ 377 (444)
T 2ve3_A 299 KKMPYLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNP 377 (444)
T ss_dssp TTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSC
T ss_pred hcChHHHHHHHHHHhcCCCccC-ccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCC
Confidence 9999999999999999999997 569999999999999999999999999999999999999999999999754322234
Q ss_pred ccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 424 NFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 424 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
++.|+|||+|+|.|+|++||.+|++++++.|+++|++++.++ ...+.. ...+..+..++.++.+
T Consensus 378 ~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~---~~~~~~--~~~~~~~~~~l~v~~~ 441 (444)
T 2ve3_A 378 PFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG---QNLELV--VTPSPRPKDNLRVKLH 441 (444)
T ss_dssp TTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSS---CCCCEE--ESSSEEETTCCEEEEE
T ss_pred CceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCC---CCccee--ccccccCCCCceEEEE
Confidence 457999999999999999999999999999999999998765 222322 2334455556655554
No 16
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=9.9e-74 Score=559.58 Aligned_cols=450 Identities=22% Similarity=0.305 Sum_probs=350.7
Q ss_pred cCCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCC
Q 011093 25 SKGSRKLPPGPTPLPIIGNLLEL-----GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRN 99 (494)
Q Consensus 25 ~~~~~~~pp~p~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~ 99 (494)
..++.+.+|||++.|+. +++.+ ..+++..+.+|+++|||||++++|+.++|+|+||+++++|+.+++ .|.+++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence 35677789999988875 66554 135678899999999999999999999999999999999998653 565554
Q ss_pred Cccccc---ccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhc----cCCCceehhH
Q 011093 100 VPESVG---SIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESC----RTGEPIDVGQ 172 (494)
Q Consensus 100 ~~~~~~---~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~----~~~~~vd~~~ 172 (494)
....+. .....+.+ ++..+|+.|+++|+.+....|+.+.++.+.+.++++++.+++.+.+.. +++.++|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~-l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~ 160 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIG-VLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISD 160 (487)
T ss_dssp CCHHHHHHHHHTTCCCC-GGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHH
T ss_pred CCcHHHHHHHHccccCC-CccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHH
Confidence 332111 11111333 567789999999999983369999999999999999999999997642 2345799999
Q ss_pred HHHHHHHHHHHHHHhcccccccCc---chHHHHHHHHHHHHHHhcCCCccccccc--cccCChhhHHHHHHHHHHHHHHH
Q 011093 173 AAFDTVVNLLSNSIFSVDLADANS---DSAREFKDSMWGLMVEAGRPNLSDFFPM--LRKLDIQGVRRRLTRHYIKILEV 247 (494)
Q Consensus 173 ~~~~~~~~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~ 247 (494)
++..+++|+++.++||.+++..++ .....+.+.+..+...... ...+|. +.++. ....+...+..+.+.+.
T Consensus 161 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~-~~~~~~~~~~~~~~~~~ 236 (487)
T 3n9y_A 161 DLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFR-TKTWKDHVAAWDVIFSK 236 (487)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcc-cHHHHHHHHHHHHHHHH
Confidence 999999999999999999875432 2344566666555544332 112231 12221 12223344445556667
Q ss_pred HHHHHHHHHHHHhhcCC--CCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHH
Q 011093 248 LDRFIDQRLEQRQEHGF--ADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKAR 325 (494)
Q Consensus 248 ~~~~i~~~~~~~~~~~~--~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 325 (494)
+.+.++++.++.++... +...|+++.|++. ..++++++.+++.++++||+|||+++++|++++|++||++|++|+
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~---~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~ 313 (487)
T 3n9y_A 237 ADIYTQNFYWELRQKGSVHHDYRGILYRLLGD---SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLR 313 (487)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS---CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcccchHHHHHHHHhc---CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHH
Confidence 77777766655432221 2446899999874 469999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCC
Q 011093 326 LELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDP 405 (494)
Q Consensus 326 ~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p 405 (494)
+|++++++++..++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.+++||||++|+||
T Consensus 314 ~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp 392 (487)
T 3n9y_A 314 AEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDP 392 (487)
T ss_dssp HHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSST
T ss_pred HHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCc
Confidence 9999998866666789999999999999999999999985 789999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCC
Q 011093 406 YSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQ 485 (494)
Q Consensus 406 ~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (494)
++|+||||++.+.+ .....|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++ .+... ...++..|+.
T Consensus 393 ~~F~PeR~l~~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~---~~~~~--~~~~~~~p~~ 465 (487)
T 3n9y_A 393 ENFDPTRWLSKDKN--ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHL---SDVGT--TFNLILMPEK 465 (487)
T ss_dssp TSCCGGGGTCSCTT--SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTC---CCCCE--EESSSEEESS
T ss_pred ccCChhhcCCCCCC--CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCC---ccccc--ceeeeecCCC
Confidence 99999999975432 23457999999999999999999999999999999999998765 22333 3345555555
Q ss_pred CeeEeee
Q 011093 486 PLRVVPV 492 (494)
Q Consensus 486 ~~~~~~~ 492 (494)
++.++.+
T Consensus 466 ~~~~~~~ 472 (487)
T 3n9y_A 466 PISFTFW 472 (487)
T ss_dssp CCCEEEE
T ss_pred CceeEEE
Confidence 5544433
No 17
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=4.7e-73 Score=549.53 Aligned_cols=414 Identities=20% Similarity=0.344 Sum_probs=348.0
Q ss_pred CCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccc
Q 011093 29 RKLPPGPTP-LPIIGNLLELGHKPHKSLAELAKVHG-PIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGS 106 (494)
Q Consensus 29 ~~~pp~p~~-~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 106 (494)
.+.||||++ +|++||++.+..+++.++.+++++|| +||++++++.++++|+||+++++++.++...+..++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 467888665 99999999887789999999999999 9999999999999999999999999887777776654443332
Q ss_pred cccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHH-HHHHhccCCCceehhHHHHHHHHHHHHHH
Q 011093 107 IQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVT-FVQESCRTGEPIDVGQAAFDTVVNLLSNS 185 (494)
Q Consensus 107 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~~~vd~~~~~~~~~~~~~~~~ 185 (494)
.. +.++++..+++.|+++|+.++ +.|+...++.+.+.+.++++.+++ .+.+ .++++|+.+++..+++++++.+
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~~~ 155 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTACQC 155 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHHHH
T ss_pred Hh--cCCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHHHHH
Confidence 22 556666678999999999998 899999999999999999999988 5532 3467999999999999999999
Q ss_pred HhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011093 186 IFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFA 265 (494)
Q Consensus 186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 265 (494)
+||.+++...+ ..++.+.+..+.. ....+..++|++.+++. ...++..+..+.+.+++.+.++++++.....+.
T Consensus 156 ~fG~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~- 229 (450)
T 3gw9_A 156 LFGEDLRKRLD--ARRFAQLLAKMES--SLIPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEEVNKDS- 229 (450)
T ss_dssp HSCHHHHHHSC--HHHHHHHHHHHHH--TCCGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-
T ss_pred HcCcchhhhhh--hHHHHHHHHHHHh--ccccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-
Confidence 99999865432 3455555555432 22234456787766532 334456677788888899999888765432333
Q ss_pred CchhHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH--hCHHHHHHHHHHHHHhhCCCCCCCcc
Q 011093 266 DSKDMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELL--NNSEALSKARLELEQKVGKGNLIEES 341 (494)
Q Consensus 266 ~~~d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~l~~Ei~~~~~~~~~~~~~ 341 (494)
...|+++.|++...+ ..++++++.++++.+++||+|||+++++|++++|+ .||++|+++++|++++ +..++.+
T Consensus 230 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~~ 306 (450)
T 3gw9_A 230 STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYN 306 (450)
T ss_dssp CCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCHH
T ss_pred ccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCChH
Confidence 567999999987543 46999999999999999999999999999999999 9999999999999987 4567888
Q ss_pred cc-CCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCC
Q 011093 342 DI-TQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDV 420 (494)
Q Consensus 342 ~~-~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~ 420 (494)
++ ++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+|+.+
T Consensus 307 ~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~~----- 380 (450)
T 3gw9_A 307 NVMDEMPFAERCARESIRRDPPLLM-LMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK----- 380 (450)
T ss_dssp HHHHHCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCS-----
T ss_pred HHHHhcHHHHHHHHHHHHhCCchhc-cccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCcC-----
Confidence 99 9999999999999999999986 5799999999999999999999999999999999999999999999321
Q ss_pred CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCC
Q 011093 421 KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNE 465 (494)
Q Consensus 421 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~ 465 (494)
....|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++
T Consensus 381 --~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 423 (450)
T 3gw9_A 381 --VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 423 (450)
T ss_dssp --STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSS
T ss_pred --CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCC
Confidence 2347999999999999999999999999999999999999755
No 18
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=4.9e-73 Score=548.17 Aligned_cols=414 Identities=20% Similarity=0.330 Sum_probs=318.7
Q ss_pred CCCCC-CCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccc
Q 011093 30 KLPPG-PTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQ 108 (494)
Q Consensus 30 ~~pp~-p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~ 108 (494)
+.||| |+++|++||+..+..+++.++.+++++||+||++++++.++++|+||+++++|+.+++..|..++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 56887 77899999999888889999999999999999999999999999999999999987655666554332221111
Q ss_pred cCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhc
Q 011093 109 KDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFS 188 (494)
Q Consensus 109 ~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG 188 (494)
+.++ + .+|+.|+++|+.+. +.|++++++.+.+.+.++++.+++.+. .++++|+.+++..+++++++.++||
T Consensus 84 --g~~~-~-~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fG 154 (455)
T 2cib_A 84 --GEGV-V-FDASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWG----EAGEIDLLDFFAELTIYTSSACLIG 154 (455)
T ss_dssp --C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCC----SEEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred --CCcc-c-cCcHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhC----CCCcEeHHHHHHHHHHHHHHHHHcC
Confidence 2333 2 36899999999997 899999999999999999999998764 2457999999999999999999999
Q ss_pred ccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCch
Q 011093 189 VDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSK 268 (494)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 268 (494)
.+++...+ .++.+.+..+.. ....+..++|++. ... .++..+..+.+.+++.+.++++++... ......
T Consensus 155 ~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~p~l~---~~~-~~~~~~~~~~~~~~~~~~i~~r~~~~~--~~~~~~ 223 (455)
T 2cib_A 155 KKFRDQLD---GRFAKLYHELER--GTDPLAYVDPYLP---IES-FRRRDEARNGLVALVADIMNGRIANPP--TDKSDR 223 (455)
T ss_dssp HHHHTTCC---HHHHHHHHHHHT--TCCGGGGTCTTCS---CHH-HHHHHHHHHHHHHHHHHHHHHHHHCC-------CC
T ss_pred CCcchhhh---HHHHHHHHHHHh--hhhHHHHhcccCC---Chh-HHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCcc
Confidence 99865433 334444443321 1112222345331 111 234455666777788888877765321 110123
Q ss_pred hHHHHHhccccC--CC-CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCC
Q 011093 269 DMLDTLLNISES--EE-IDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQ 345 (494)
Q Consensus 269 d~~~~ll~~~~~--~~-ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 345 (494)
|+++.|++...+ .. ++++++.++++.+++||+|||+++++|++++|++||++|++|++|++++++++..++++++++
T Consensus 224 dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~ 303 (455)
T 2cib_A 224 DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQ 303 (455)
T ss_dssp CHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSC
T ss_pred cHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhc
Confidence 999999987533 34 899999999999999999999999999999999999999999999999998766788999999
Q ss_pred ChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCcc
Q 011093 346 LPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNF 425 (494)
Q Consensus 346 l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 425 (494)
||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++.+.+....+.
T Consensus 304 lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~ 382 (455)
T 2cib_A 304 IPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRW 382 (455)
T ss_dssp CHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTT
T ss_pred CHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCc
Confidence 99999999999999999986 67999999999999999999999999999999999999999999999965422111245
Q ss_pred ccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCC
Q 011093 426 ELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDN 464 (494)
Q Consensus 426 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~ 464 (494)
.|+|||.|+|.|+|++||.+|++++++.|+++|++++..
T Consensus 383 ~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~ 421 (455)
T 2cib_A 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQ 421 (455)
T ss_dssp TCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESS
T ss_pred cccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCC
Confidence 799999999999999999999999999999999999863
No 19
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=7.5e-72 Score=541.82 Aligned_cols=414 Identities=25% Similarity=0.361 Sum_probs=330.1
Q ss_pred CCCCCCCCCCcccccccCC-CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccccc-
Q 011093 30 KLPPGPTPLPIIGNLLELG-HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSI- 107 (494)
Q Consensus 30 ~~pp~p~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~- 107 (494)
+.||||+++|++||++.+. .+++..+.+++++||+||++++++.++++|+||+++++|+.++ .|.+... .....+
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence 4689999999999998884 4678889999999999999999999999999999999999642 2332111 111111
Q ss_pred ccCCCCcccc-cCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHH
Q 011093 108 QKDEYGIPWL-PVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSI 186 (494)
Q Consensus 108 ~~~~~~~~~~-~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~ 186 (494)
...+.++++. .+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+. ..++++|+.+++..+++|+++.++
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~ 157 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCG 157 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHHH
Confidence 0113455444 47999999999998 89999999999999999999999998753 235689999999999999999999
Q ss_pred hcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 011093 187 FSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFAD 266 (494)
Q Consensus 187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 266 (494)
||.+++..+.+....+.+.+...+....... ...|++..+ .....++..+..+.+.+++.+.++++++. +. .
T Consensus 158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~----~~-~ 229 (470)
T 2ij2_A 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKL--QRANPDDPA-YDENKRQFQEDIKVMNDLVDKIIADRKAS----GE-Q 229 (470)
T ss_dssp HSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC-----CTTSGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CC-C
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHHHHHH--hhhhhHhhc-cchHHHHHHHHHHHHHHHHHHHHHHHHhc----cc-C
Confidence 9999865321122344444444333221110 011333322 12233445566667777888888776653 22 4
Q ss_pred chhHHHHHhcccc---CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCcccc
Q 011093 267 SKDMLDTLLNISE---SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDI 343 (494)
Q Consensus 267 ~~d~~~~ll~~~~---~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 343 (494)
..|+++.|++..+ +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+++++++ ..++++++
T Consensus 230 ~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~ 308 (470)
T 2ij2_A 230 SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYKQV 308 (470)
T ss_dssp CSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCCHHHH
T ss_pred chhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCHHHH
Confidence 5699999998653 2469999999999999999999999999999999999999999999999999985 45899999
Q ss_pred CCChhHHHHHHHHhhcCCCCCCcCccccccceeecc-EEeCCCCEEEechhhhccCCCCC-CCCCCCCCCCccCCCCCCC
Q 011093 344 TQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITG-FIIPKGAQVLVNAWAIGRDTSTW-DDPYSFKPERFLGSDVDVK 421 (494)
Q Consensus 344 ~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g-~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~ 421 (494)
++||||+|||+|+||++|+++. ++|.+.+|++++| |.||+|+.|.++.+++||||++| +||++|+|+|| +. .. .
T Consensus 309 ~~lpyl~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~-~~-~ 384 (470)
T 2ij2_A 309 KQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN-PS-A 384 (470)
T ss_dssp HTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS-GG-G
T ss_pred hCCHHHHHHHHHHHhcCCCccc-cceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC-CC-c
Confidence 9999999999999999999997 5799999999999 99999999999999999999999 99999999999 32 11 1
Q ss_pred CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceee
Q 011093 422 GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWK 461 (494)
Q Consensus 422 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~ 461 (494)
.....|+|||.|+|.|+|++||.+|++++++.|+++|+++
T Consensus 385 ~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~ 424 (470)
T 2ij2_A 385 IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424 (470)
T ss_dssp SCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe
Confidence 1235789999999999999999999999999999999998
No 20
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=1.2e-72 Score=547.56 Aligned_cols=442 Identities=20% Similarity=0.323 Sum_probs=350.5
Q ss_pred CCCCCCCCC-CCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc
Q 011093 26 KGSRKLPPG-PTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV 104 (494)
Q Consensus 26 ~~~~~~pp~-p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 104 (494)
.++.+.||| |+++|++||++.+.++++.++.+++++||+||+++++|.++++|++|+++++++.++...+.........
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 456678998 8899999999988888999999999999999999999999999999999999998766555443222111
Q ss_pred -cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHH
Q 011093 105 -GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLS 183 (494)
Q Consensus 105 -~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~ 183 (494)
..+ .|.++.+..+|+.|+.+|+++. +.|+...++.+.+.+.+++..+++.|.+ +..+|+.+++..+++++++
T Consensus 87 ~~~~--~g~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~~~ 159 (461)
T 3i3k_A 87 TTPV--FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE----SGEKNVFEALSELIILTAS 159 (461)
T ss_dssp HHHH--HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS----EEEEEHHHHHHHHHHHHHH
T ss_pred hhhh--cCCeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCcCHHHHHHHHHHHHHH
Confidence 111 1556666677999999999998 8899999999999999999999887742 3468999999999999999
Q ss_pred HHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011093 184 NSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHG 263 (494)
Q Consensus 184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 263 (494)
.++||.++..... ..+.+.+..+.. ........+|.+ ++.. ..++..+..+.+.+++.+.++++++ .+
T Consensus 160 ~~~~G~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~P~~--l~~~-~~~~~~~~~~~~~~~~~~~i~~~~~----~~ 227 (461)
T 3i3k_A 160 HCLHGKEIRSQLN---EKVAQLYADLDG--GFSHAAWLLPGW--LPLP-SFRRRDRAHREIKDIFYKAIQKRRQ----SQ 227 (461)
T ss_dssp HHHTCHHHHHTCC---HHHHHHHHHHHT--TSSHHHHHSCTT--SCCH-HHHHHHHHHHHHHHHHHHHHHHHTT----CC
T ss_pred HHHccHhhhhHHH---HHHHHHHHHHHh--ccccchhhcccc--cCCH-HHHHHHHHHHHHHHHHHHHHHHHHh----cc
Confidence 9999988765433 223333332221 111111123321 1112 2234455666666777766666543 22
Q ss_pred CCCchhHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCC-CCCCc
Q 011093 264 FADSKDMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKG-NLIEE 340 (494)
Q Consensus 264 ~~~~~d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~ 340 (494)
+ ...|+++.|++...+ ..++++++..+++.+++||+|||+++++|++++|++||++|+++++|++++++++ ..++.
T Consensus 228 ~-~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~ 306 (461)
T 3i3k_A 228 E-KIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTY 306 (461)
T ss_dssp C-CCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred c-ccccHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 2 457999999987643 4599999999999999999999999999999999999999999999999999864 34688
Q ss_pred cccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCC
Q 011093 341 SDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDV 420 (494)
Q Consensus 341 ~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~ 420 (494)
+++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||++.+...
T Consensus 307 ~~~~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 385 (461)
T 3i3k_A 307 DQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS 385 (461)
T ss_dssp HHHHTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHH
T ss_pred HHHhcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCC
Confidence 9999999999999999999999975 689999999999999999999999999999999999999999999999754321
Q ss_pred CCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093 421 KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA 493 (494)
Q Consensus 421 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (494)
.....|+|||+|+|.|+|++||.+|++++++.|+++|||++.++. ..... .......|+.++.+..++
T Consensus 386 -~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~-~~~~~~~p~~~~~~~~~~ 453 (461)
T 3i3k_A 386 -GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY---FPTVN-YTTMIHTPENPVIRYKRR 453 (461)
T ss_dssp -HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTC---CCCBC-CSSSSCCBSSCEEEEEEC
T ss_pred -CCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCC---CCCcc-cceeecCCCCceEEeecc
Confidence 134579999999999999999999999999999999999998762 11222 234567788899888764
No 21
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=4.6e-71 Score=535.91 Aligned_cols=425 Identities=20% Similarity=0.331 Sum_probs=334.8
Q ss_pred CCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-cccc-c--ccCCCCcccccCChhHH
Q 011093 49 HKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-SVGS-I--QKDEYGIPWLPVSTKWK 124 (494)
Q Consensus 49 ~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~~-~--~~~~~~~~~~~~~~~w~ 124 (494)
+.+++.+.+|+++|||||++++|+.++|+|+||+++++|+.++ .+.+.+... .... . ...+.++++..+|+.|+
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~ 87 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH 87 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence 4568889999999999999999999999999999999999643 233322111 0000 0 01245666667899999
Q ss_pred HHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHH
Q 011093 125 KLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKD 204 (494)
Q Consensus 125 ~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~ 204 (494)
++|+.++ +.|+.+.++.+.+.+.+.++.+++.+.+..++++++|+.+++..+++|+++.++||.+++..+... ..+.+
T Consensus 88 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~-~~~~~ 165 (456)
T 3mdm_A 88 KQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQ-KPLSQ 165 (456)
T ss_dssp HHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCC-HHHHH
T ss_pred HHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccc-cHHHH
Confidence 9999998 899999999999999999999999998765566799999999999999999999999987543221 33333
Q ss_pred HHHHHHHHhcCCCccccccccccCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCCCC
Q 011093 205 SMWGLMVEAGRPNLSDFFPMLRKLDI-QGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESEEI 283 (494)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l 283 (494)
.+..+...... ...|++.+++. ....+...+..+.+.+++.++++++++..+.+.+ ...|+++.|++.. +..+
T Consensus 166 ~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~-~~~d~l~~ll~~~-~~~~ 239 (456)
T 3mdm_A 166 AVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEE-VPADILTQILKAE-EGAQ 239 (456)
T ss_dssp HHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCHHHHHHHHT-SSCS
T ss_pred HHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chhhHHHHHHHhc-CCCC
Confidence 33333322111 01122222211 1112334455666777778888877766543222 4569999999865 3568
Q ss_pred CHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCC
Q 011093 284 DRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPV 363 (494)
Q Consensus 284 s~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~ 363 (494)
+++++.+++..+++||+|||+++++|++++|++||++|++|++|++++++++..++.+++++||||+|||+|+||++|++
T Consensus 240 ~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~ 319 (456)
T 3mdm_A 240 DDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPA 319 (456)
T ss_dssp SSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred CCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHH
Q 011093 364 PLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLA 443 (494)
Q Consensus 364 ~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a 443 (494)
+. .+|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||++.+. .....|+|||.|+|.|+|++||
T Consensus 320 ~~-~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~---~~~~~~~pFg~G~r~C~G~~lA 395 (456)
T 3mdm_A 320 WG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP---KPRFTYFPFSLGHRSCIGQQFA 395 (456)
T ss_dssp CC-EEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC---CCSSSCCTTCCGGGSCTTHHHH
T ss_pred cc-cccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC---CCCCcccCCCCCCcCCCCHHHH
Confidence 86 5699999999999999999999999999999999999999999999997542 2345799999999999999999
Q ss_pred HHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCe--eEeee
Q 011093 444 IRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPL--RVVPV 492 (494)
Q Consensus 444 ~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 492 (494)
.+|++++++.|+++|+|++.++ ...++... .+..|+.++ .+++|
T Consensus 396 ~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~--~~~~p~~~~~~~~~~r 441 (456)
T 3mdm_A 396 QMEVKVVMAKLLQRLEFRLVPG---QRFGLQEQ--ATLKPLDPVLCTLRPR 441 (456)
T ss_dssp HHHHHHHHHHHHHHEEEEECTT---CCCCEEES--SSEEESSCCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCeEEeCCC---Ccceeecc--eEEecCCCeEEEEEEc
Confidence 9999999999999999999765 33444333 344454454 44454
No 22
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=1.3e-72 Score=547.62 Aligned_cols=434 Identities=23% Similarity=0.396 Sum_probs=322.2
Q ss_pred CCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCccc-CCCCCcccccc
Q 011093 28 SRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSL-CNRNVPESVGS 106 (494)
Q Consensus 28 ~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~-~~~~~~~~~~~ 106 (494)
...+||||+++|++||++.+..+++.++.++++ |||||++++|+.++++|+||+.+++|+.++ .| .+.........
T Consensus 21 ~~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~ 97 (467)
T 3dbg_A 21 LREPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEG 97 (467)
T ss_dssp -CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC------------
T ss_pred CCCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHH
Confidence 367899999999999999988889999999988 999999999999999999999999999866 44 33222222222
Q ss_pred cccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHH
Q 011093 107 IQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSI 186 (494)
Q Consensus 107 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~ 186 (494)
.. +...++..+|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+. .++++|+.+++..+++++++.++
T Consensus 98 ~~--g~~~l~~~dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~~ 170 (467)
T 3dbg_A 98 LL--GKEGVATANGPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQ----PGKTVDATSESFRVAVRVAARCL 170 (467)
T ss_dssp --------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHHH
T ss_pred hc--CCCCcccCCcHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHHH
Confidence 11 312346678999999999998 899999999999999999999999874 36789999999999999999999
Q ss_pred hcccccccCcchHHHHHHHHHHHHHHhcCCCccccccc--cccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011093 187 FSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPM--LRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGF 264 (494)
Q Consensus 187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 264 (494)
||.+++.. ....+.+.+..+...... ..++|+ +.++. ....++..+..+.+.+++.+.++++++ ++.
T Consensus 171 ~g~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~----~~~ 239 (467)
T 3dbg_A 171 LRGQYMDE---RAERLCVALATVFRGMYR---RMVVPLGPLYRLP-LPANRRFNDALADLHLLVDEIIAERRA----SGQ 239 (467)
T ss_dssp SCSSCCHH---HHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTT----CCS
T ss_pred hCCcccch---hHHHHHHHHHHHHHHHHH---HhccchhhhhhCC-ChHhHHHHHHHHHHHHHHHHHHHHHHh----cCC
Confidence 99988642 234455555444332211 122332 22221 111233445556666677776665543 222
Q ss_pred CCchhHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccc
Q 011093 265 ADSKDMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESD 342 (494)
Q Consensus 265 ~~~~d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 342 (494)
...|+++.|++..++ ..++++++.++++.+++||+|||+++++|++++|++||++|++|++|+++++++ ..++.++
T Consensus 240 -~~~dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~ 317 (467)
T 3dbg_A 240 -KPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFED 317 (467)
T ss_dssp -SCCSHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHH
T ss_pred -CchHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHH
Confidence 456999999987543 359999999999999999999999999999999999999999999999999985 6789999
Q ss_pred cCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCC
Q 011093 343 ITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKG 422 (494)
Q Consensus 343 ~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~ 422 (494)
+++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||++.+.. ..
T Consensus 318 l~~l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-~~ 395 (467)
T 3dbg_A 318 VRKLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA-NV 395 (467)
T ss_dssp HTTCHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT-TS
T ss_pred HhhCHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc-cC
Confidence 99999999999999999999986 67999999999999999999999999999999999999999999999964322 12
Q ss_pred CccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 423 RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 423 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
....|+|||.|+|.|+|++||.+|++++++.|+++|++++.++. . .....+++..|+ ++.+++.
T Consensus 396 ~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~~~~~~~~~~p~-~l~~~~~ 459 (467)
T 3dbg_A 396 PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS---N--DAVRVGITLRPH-DLLVRPV 459 (467)
T ss_dssp CTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC---E--EEEEESSSEEEE-ECEEEEE
T ss_pred CCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC---C--CccceeeEecCC-CCccchh
Confidence 34579999999999999999999999999999999999997652 2 222334555554 5555543
No 23
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=1.1e-69 Score=531.43 Aligned_cols=445 Identities=17% Similarity=0.243 Sum_probs=324.7
Q ss_pred CCCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-c
Q 011093 26 KGSRKLPPGPTP-LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-S 103 (494)
Q Consensus 26 ~~~~~~pp~p~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~ 103 (494)
++..+.||||++ +|++||++.+..+++.++.+++++||+||++++|+.++++|+||+++++|+.++.. +....... .
T Consensus 9 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~ 87 (491)
T 3dax_A 9 RRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFAT 87 (491)
T ss_dssp CCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHH
T ss_pred ccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHH
Confidence 455678899988 89999999988888999999999999999999999999999999999999975442 22211111 1
Q ss_pred ccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHh---ccCCCceehhHHHHHHHHH
Q 011093 104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQES---CRTGEPIDVGQAAFDTVVN 180 (494)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~~~vd~~~~~~~~~~~ 180 (494)
..... +.+.+...+|+.|+++|+.+. +.|+...++.+.+.+.+.+..+++..... ...+..+++..++.+++++
T Consensus 88 ~~~~~--g~~~~~~~~g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 164 (491)
T 3dax_A 88 SAKAF--GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE 164 (491)
T ss_dssp HHHHH--TCCCCCGGGTSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHH
T ss_pred HHHHc--CCCcccccchhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHH
Confidence 11111 334332456788999999987 68888888888887777777666554321 1123468899999999999
Q ss_pred HHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCcccccccccc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 181 LLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRK-LDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 181 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
+++.+.||.++...+. ....+.+....+.. +...+|++.. ++ ....++..+..+.+.+. +.+++.+
T Consensus 165 ~~~~~~fG~~~~~~~~-~~~~~~~~~~~~~~------~~~~~p~l~~~lp-~~~~~~~~~~~~~~~~~---~~~~~~~-- 231 (491)
T 3dax_A 165 AGYLTIFGRDLTRRDT-QKAHILNNLDNFKQ------FDKVFPALVAGLP-IHMFRTAHNAREKLAES---LRHENLQ-- 231 (491)
T ss_dssp HHHHHHHCBCSTTGGG-HHHHHHHHHHHHHH------HHHHHHHHHTTCC-GGGSHHHHHHHHHHHHH---TSHHHHT--
T ss_pred HhHHHHcCcccccccc-hhhhhhHHHHHHHH------HHHHhHHHHHhCC-HhhhhHHHHHHHHHHHH---HHHHHhh--
Confidence 9999999988754321 11111221111111 1123443322 21 11112222322222222 1222221
Q ss_pred hhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCC--
Q 011093 260 QEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGN-- 336 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-- 336 (494)
..+ ...|+++.+++..++ ..++++++.++++.+++||+|||+++++|++++|++||++|++|++||+++++++.
T Consensus 232 --~~~-~~~d~l~~ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~ 308 (491)
T 3dax_A 232 --KRE-SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQK 308 (491)
T ss_dssp --TCB-SCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccc-chhHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccc
Confidence 112 456899998875433 45889999999999999999999999999999999999999999999999987532
Q ss_pred --------CCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceee----ccEEeCCCCEEEechhhhccCCCCCCC
Q 011093 337 --------LIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEI----TGFIIPKGAQVLVNAWAIGRDTSTWDD 404 (494)
Q Consensus 337 --------~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~----~g~~ip~g~~v~~~~~~~~~d~~~~~~ 404 (494)
.++.+++++||||+|||+||||++|+ +. ++|.+.+|+++ +||.||||+.|.++.+++||||++|+|
T Consensus 309 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d 386 (491)
T 3dax_A 309 VSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPD 386 (491)
T ss_dssp CCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSS
T ss_pred cccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCC
Confidence 35889999999999999999999985 54 67999999999 789999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCCC--------CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCcccc
Q 011093 405 PYSFKPERFLGSDVDVK--------GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEK 476 (494)
Q Consensus 405 p~~F~p~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~ 476 (494)
|++|+|+||++.++... ..+..|+|||+|+|.|+|++||.+|++++++.||++|+|++.++.. ...+++..
T Consensus 387 p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~ 465 (491)
T 3dax_A 387 PLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA-KCPPLDQS 465 (491)
T ss_dssp TTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTC-CCCCBCGG
T ss_pred HHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCC-CCCCCCcc
Confidence 99999999997543211 1245799999999999999999999999999999999999976521 12223221
Q ss_pred -cc-ccccCCCCeeEeeee
Q 011093 477 -FG-ITLQKAQPLRVVPVA 493 (494)
Q Consensus 477 -~~-~~~~~~~~~~~~~~~ 493 (494)
.+ .+.+|+.++++++|.
T Consensus 466 ~~~~~~~~p~~~~~~~~r~ 484 (491)
T 3dax_A 466 RAGLGILPPLNDIEFKYKF 484 (491)
T ss_dssp GTBEEECCBSSCCEEEEEE
T ss_pred cccccccCCCCCceEEEEe
Confidence 23 356888899999885
No 24
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=2.3e-69 Score=528.49 Aligned_cols=447 Identities=17% Similarity=0.207 Sum_probs=340.0
Q ss_pred ccCCCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCc-ccCCCCCc
Q 011093 24 FSKGSRKLPPGPTP-LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDK-SLCNRNVP 101 (494)
Q Consensus 24 ~~~~~~~~pp~p~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~-~~~~~~~~ 101 (494)
.+++..+.||||++ +|++||++.+..+++.++.+++++|||||++++|+.++++|+||+++++++.+++. .+......
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~ 86 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHH
Confidence 44667788999998 79999999999999999999999999999999999999999999999999975431 22221111
Q ss_pred ccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhcc---CCCceehhHHHHHHH
Q 011093 102 ESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCR---TGEPIDVGQAAFDTV 178 (494)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~vd~~~~~~~~~ 178 (494)
...... +.+.....+|+.|+++|+.+. +.|++..++.+.+.+.+++..+++.+..... .+...++.+++..++
T Consensus 87 -~~~~~~--g~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~ 162 (491)
T 3v8d_A 87 -LSAKAF--GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp -HHHHHH--TCCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred -HHHHhc--CCcccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence 111111 334444467899999999887 8899999999999999999988875432211 245789999999999
Q ss_pred HHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 179 VNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQ 258 (494)
Q Consensus 179 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 258 (494)
+++++..+||.++...+ .....+.+.+..+... ...+|.+.........++..++.+.+.+++.+.+.++
T Consensus 163 ~~~~~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~--- 232 (491)
T 3v8d_A 163 FEAGYLTIFGRDLTRRD-TQKAHILNNLDNFKQF------DKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQK--- 232 (491)
T ss_dssp HHHHHHHHHCBCCSCGG-GHHHHHHHHHHHHHHH------HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTT---
T ss_pred HHHHHHHHcCccccccc-hhhhhhHHHHHHHHHH------HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 99999999999876432 2223334333333211 1123322211112223445555555554444433221
Q ss_pred HhhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCC--
Q 011093 259 RQEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKG-- 335 (494)
Q Consensus 259 ~~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-- 335 (494)
.+ ...|+++.+++..++ ..++++++..+++.+++||++||+++++|++++|++||++|++|++||+++++++
T Consensus 233 ----~~-~~~d~l~~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~ 307 (491)
T 3v8d_A 233 ----RE-SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQ 307 (491)
T ss_dssp ----CB-SCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTC
T ss_pred ----cc-cccHHHHHHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcccc
Confidence 11 346899999876544 5599999999999999999999999999999999999999999999999998643
Q ss_pred --------CCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceee----ccEEeCCCCEEEechhhhccCCCCCC
Q 011093 336 --------NLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEI----TGFIIPKGAQVLVNAWAIGRDTSTWD 403 (494)
Q Consensus 336 --------~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~----~g~~ip~g~~v~~~~~~~~~d~~~~~ 403 (494)
..++.+++++||||+|||+|+||++|+. .++|.+.+|+++ +||.||+|+.|.++.+++|+||++|+
T Consensus 308 ~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~~--~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 385 (491)
T 3v8d_A 308 KVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYP 385 (491)
T ss_dssp CCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEEE--CEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSS
T ss_pred ccccccccccCCHHHHhcChHHHHHHHHHhhcCCCC--ccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCC
Confidence 3467888999999999999999999853 356999999999 99999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCCCC--------CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCC-CCCCCcc
Q 011093 404 DPYSFKPERFLGSDVDVK--------GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVT-SGNIDME 474 (494)
Q Consensus 404 ~p~~F~p~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~ 474 (494)
||++|+|+||++.++... ..+..|+|||+|+|.|+|++||.+|++++++.|+++|||++.++.. ....+..
T Consensus 386 ~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 465 (491)
T 3v8d_A 386 DPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQS 465 (491)
T ss_dssp STTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGG
T ss_pred CccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcc
Confidence 999999999997653211 1245789999999999999999999999999999999999987632 1122332
Q ss_pred ccccccccCCCCeeEee
Q 011093 475 EKFGITLQKAQPLRVVP 491 (494)
Q Consensus 475 ~~~~~~~~~~~~~~~~~ 491 (494)
.....+.+|...+.|+.
T Consensus 466 ~~~~~~~~p~~~i~v~~ 482 (491)
T 3v8d_A 466 RAGLGILPPLNDIEFKY 482 (491)
T ss_dssp GTBEEECCBSSCCEEEE
T ss_pred cCcCcccCCCCCeEEEE
Confidence 22334677888888875
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=9.9e-67 Score=511.06 Aligned_cols=447 Identities=17% Similarity=0.211 Sum_probs=316.2
Q ss_pred CCCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-c
Q 011093 26 KGSRKLPPGPTP-LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-S 103 (494)
Q Consensus 26 ~~~~~~pp~p~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~ 103 (494)
++..+.||||++ +|++||++.+..+++.++.+++++||+||++++|+.++++|+||+++++++.++...+...+... .
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 556678999998 99999998887778999999999999999999999999999999999999976543232222111 1
Q ss_pred ccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHh-ccCCCceehhHHHHHHHHHHH
Q 011093 104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQES-CRTGEPIDVGQAAFDTVVNLL 182 (494)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~~~vd~~~~~~~~~~~~~ 182 (494)
.... .+.+.+ ..+|+.| |+.+. +.|+...++.+.+.+.+.+...+...... ......+++..++.+++++++
T Consensus 94 ~~~~--~g~~~~-~~~~~~~---rr~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~ 166 (498)
T 3b6h_A 94 MERI--FDVQLP-HYSPSDE---KARMK-LTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAG 166 (498)
T ss_dssp HHHT--SCCCCT-TCCHHHH---HHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHH
T ss_pred HHHH--cCCCcc-ccCHHHH---HHHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHH
Confidence 1111 133433 3456666 45555 67888888888777777776666654322 123346889999999999999
Q ss_pred HHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCcccccccccc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011093 183 SNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRK-LDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQE 261 (494)
Q Consensus 183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 261 (494)
+..+||.+++..+.....+..+.+..+..... .+...+|++.. +......++..+..+.+.+ .+++++.+
T Consensus 167 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---- 237 (498)
T 3b6h_A 167 YLTLYGIEALPRTHESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWK---LLSPARLA---- 237 (498)
T ss_dssp HHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH---HTCHHHHT----
T ss_pred HHhhcCcccccccccchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHH---HHHHHHHh----
Confidence 99999998754321110112222222222111 11223443321 1111111222222222222 11222211
Q ss_pred cCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCC----
Q 011093 262 HGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGN---- 336 (494)
Q Consensus 262 ~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~---- 336 (494)
..+ ...|+++.+++..++ ..++++++. +++.+++||+|||+++++|++++|++||++|++|++|++++++++.
T Consensus 238 ~~~-~~~d~l~~ll~~~~~~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~ 315 (498)
T 3b6h_A 238 RRA-HRSKWLESYLLHLEEMGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVS 315 (498)
T ss_dssp TCB-SCCHHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC------
T ss_pred ccc-cHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCC
Confidence 122 456999999876543 346777777 8889999999999999999999999999999999999999987643
Q ss_pred ---CCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceee-----ccEEeCCCCEEEechhh-hccCCCCCCCCCC
Q 011093 337 ---LIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEI-----TGFIIPKGAQVLVNAWA-IGRDTSTWDDPYS 407 (494)
Q Consensus 337 ---~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-----~g~~ip~g~~v~~~~~~-~~~d~~~~~~p~~ 407 (494)
.++.+++++||||+|||+|+||++|+ +. ++|.+.+|+++ +||.||||+.|.++.++ +|+||++|+||++
T Consensus 316 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~ 393 (498)
T 3b6h_A 316 QTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEV 393 (498)
T ss_dssp ----CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTS
T ss_pred cccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhh
Confidence 25889999999999999999999985 54 67999999998 68999999999999999 9999999999999
Q ss_pred CCCCCccCCCCCCC--------CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccc--cc
Q 011093 408 FKPERFLGSDVDVK--------GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEE--KF 477 (494)
Q Consensus 408 F~p~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~--~~ 477 (494)
|+|+||++.+++.+ ..+..|+|||+|+|.|||++||.+|++++++.||++|||++.++.. ...+.+. ..
T Consensus 394 F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~ 472 (498)
T 3b6h_A 394 FKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV-EIPEFDLSRYG 472 (498)
T ss_dssp CCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTC-CCCCBCGGGTB
T ss_pred cCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCC-CCCCCCccccc
Confidence 99999997543211 1245799999999999999999999999999999999999976521 1122221 12
Q ss_pred cccccCCCCeeEeeee
Q 011093 478 GITLQKAQPLRVVPVA 493 (494)
Q Consensus 478 ~~~~~~~~~~~~~~~~ 493 (494)
..+.+|..++.+++|+
T Consensus 473 ~~~~~p~~~~~~~~~~ 488 (498)
T 3b6h_A 473 FGLMQPEHDVPVRYRI 488 (498)
T ss_dssp SSBCCBSSCCEEEEEE
T ss_pred cccCCCCCCccEEEEe
Confidence 2345777777777664
No 26
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=2.8e-65 Score=489.07 Aligned_cols=400 Identities=21% Similarity=0.271 Sum_probs=304.6
Q ss_pred cCCCCCCCCCCCCCCcccccc-cCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc
Q 011093 25 SKGSRKLPPGPTPLPIIGNLL-ELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNVPE 102 (494)
Q Consensus 25 ~~~~~~~pp~p~~~p~lG~~~-~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~ 102 (494)
.++.++.||||+++|++|++. .+..+++.++.++ ++|||||++++ ++.++++|+||+++++|+.++ .|.+++...
T Consensus 21 ~~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~ 97 (436)
T 2cd8_A 21 MRRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNS 97 (436)
T ss_dssp -------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGC
T ss_pred cchhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccc
Confidence 355678899999999999975 4567899999999 99999999997 778899999999999999865 455543211
Q ss_pred ccccc---ccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHH
Q 011093 103 SVGSI---QKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTV 178 (494)
Q Consensus 103 ~~~~~---~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~ 178 (494)
..... ...+.+ ++..+|+.|+++|+.+. +.|++..++.+.+.+++.++.+++.|.+ ..++++|+.+++ ..++
T Consensus 98 ~~~~~~~~~~~~~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~ 173 (436)
T 2cd8_A 98 TTPLTEAEAALNHN-MLESDPPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLA--APDGRADLMESLAWPLP 173 (436)
T ss_dssp SSCCCTTGGGTCCS-GGGCCTTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHT--CTTSCEEHHHHTTTHHH
T ss_pred cccccccccccccc-ccccCchHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCcchHHHHHHHHH
Confidence 11100 111333 45678999999999998 8999999999999999999999999974 235789999876 5799
Q ss_pred HHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 179 VNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQ 258 (494)
Q Consensus 179 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 258 (494)
+++++. +||.+... ...+.+....+.. . . + . ++..+....+.+++.+.+++++++
T Consensus 174 ~~vi~~-~~G~~~~~-----~~~~~~~~~~~~~---~---~---~------~----~~~~~~~~~~~~~~~~~i~~r~~~ 228 (436)
T 2cd8_A 174 ITVISE-LLGVPEPD-----RAAFRVWTDAFVF---P---D---D------P----AQAQTAMAEMSGYLSRLIDSKRGQ 228 (436)
T ss_dssp HHHHHH-HHTCCGGG-----HHHHHHHHHHHHS---C---S---S------T----THHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHH-HhCCCHHH-----HHHHHHHHHHHhc---c---C---C------H----HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999997 79987642 1344443333221 0 0 0 0 234556666777777777665432
Q ss_pred HhhcCCCCchhHHHHHhcccc--CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCC
Q 011093 259 RQEHGFADSKDMLDTLLNISE--SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGN 336 (494)
Q Consensus 259 ~~~~~~~~~~d~~~~ll~~~~--~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~ 336 (494)
...|+++.|++... +..++++|+.+++..+++||+|||+++++|++++|++||++|++|++|+.
T Consensus 229 -------~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~------- 294 (436)
T 2cd8_A 229 -------DGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT------- 294 (436)
T ss_dssp -------CCCSHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------
T ss_pred -------CCCCHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh-------
Confidence 34589999998654 25699999999999999999999999999999999999999999999852
Q ss_pred CCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCC
Q 011093 337 LIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGS 416 (494)
Q Consensus 337 ~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~ 416 (494)
|++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||-
T Consensus 295 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-- 361 (436)
T 2cd8_A 295 -----------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT-- 361 (436)
T ss_dssp -----------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred -----------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC--
Confidence 6999999999999999966789999999999999999999999999999999999999999999961
Q ss_pred CCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093 417 DVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA 493 (494)
Q Consensus 417 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (494)
..|+|||.|+|.|+|++||.+|++++++.|+++| ++++..+. ..+.+.....+..+...++.+++|.
T Consensus 362 --------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~l~v~~~~r~ 429 (436)
T 2cd8_A 362 --------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSP--GELVWYPNPMIRGLKALPIRWRRGR 429 (436)
T ss_dssp --------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCG--GGCCBCCCTTBCCBSCCEEC-----
T ss_pred --------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCC--ccceeccCcccCCcceeEEEEecCc
Confidence 2689999999999999999999999999999999 69986431 2334433333334455566666653
No 27
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=9.8e-66 Score=501.40 Aligned_cols=434 Identities=18% Similarity=0.238 Sum_probs=302.2
Q ss_pred CCCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCc-cc
Q 011093 26 KGSRKLPPGPTP-LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVP-ES 103 (494)
Q Consensus 26 ~~~~~~pp~p~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-~~ 103 (494)
+++.+.||||++ +|++||++.+..+++.++.+++++||+||++++|+.++++|+||+++++++.++.. +...+.. ..
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~ 92 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVL 92 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHH
Confidence 556788999998 99999999887789999999999999999999999999999999999999976532 2222111 11
Q ss_pred ccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhc--cCCCceehhHHHHHHHHHH
Q 011093 104 VGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESC--RTGEPIDVGQAAFDTVVNL 181 (494)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~vd~~~~~~~~~~~~ 181 (494)
.... .+.+.+ ..+++.| |+.+. +.|++..++.+.+.+.+.+..+++.+.... .....+++..++.++++++
T Consensus 93 ~~~~--~g~~~~-~~~~~~~---R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (475)
T 3b98_A 93 MKRI--FNMILP-SHNPESE---KKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKT 165 (475)
T ss_dssp HHHT--TCCCCT-TCCHHHH---HHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHH
T ss_pred HHHH--hCCCCC-CCChHHH---HHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHH
Confidence 1111 133433 3455555 56666 689999999999988888888877654321 1123567888888888888
Q ss_pred HHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCcccccccccc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011093 182 LSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRK-LDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQ 260 (494)
Q Consensus 182 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 260 (494)
++...||.+.. +......+.+.+..+. ..+|++.. +......+...+..+. +.+.+. +...
T Consensus 166 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~---------~~~p~l~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~ 227 (475)
T 3b98_A 166 GYLTVFGAENN--NSAALTQIYEEFRRFD---------KLLPKLARTTVNKEEKQIASAAREK----LWKWLT---PSGL 227 (475)
T ss_dssp HHHHHHCCTTS--CHHHHHHHHHHHHHHH---------HHHHHHHTTCCCHHHHHHHHHHHHH----HHHHHS---CTTS
T ss_pred hhhheeCCccc--cchhcHHHHHHHHHHH---------hhhHHHHHHhcChhhhHHHHHHHHH----HHHHHH---HHHh
Confidence 88888884421 1112223333222211 12333211 1011111122222222 222221 1111
Q ss_pred hcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCC
Q 011093 261 EHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIE 339 (494)
Q Consensus 261 ~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~ 339 (494)
...+ ...|+++.+++..++ ..++++++. +++.+++||+|||+++++|++++|++||++|++|++|++ .+ ...++
T Consensus 228 ~~~~-~~~d~l~~ll~~~~~~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~-~~~~~ 302 (475)
T 3b98_A 228 DRKP-REQSWLGSYVKQLQDEGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG-KHLRL 302 (475)
T ss_dssp CCCC-CTTSHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC----------
T ss_pred hccc-cccHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC-CCCCC
Confidence 1122 456999999976433 457888888 999999999999999999999999999999999999998 23 33468
Q ss_pred ccccCCChhHHHHHHHHhhcCCCCCCcCccccccceee-----ccEEeCCCCEEEechhh-hccCCCCCCCCCCCCCCCc
Q 011093 340 ESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEI-----TGFIIPKGAQVLVNAWA-IGRDTSTWDDPYSFKPERF 413 (494)
Q Consensus 340 ~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-----~g~~ip~g~~v~~~~~~-~~~d~~~~~~p~~F~p~R~ 413 (494)
.+++++||||+|||+|+||++|+ +. ++|.+.+|+++ +||.||||+.|.++.++ +||||++|+||++|||+||
T Consensus 303 ~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRf 380 (475)
T 3b98_A 303 EERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRF 380 (475)
T ss_dssp -----CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTT
T ss_pred HHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchh
Confidence 99999999999999999999986 54 67999999999 88999999999999999 9999999999999999999
Q ss_pred cCCCCCCC--------CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccc--cccccccC
Q 011093 414 LGSDVDVK--------GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEE--KFGITLQK 483 (494)
Q Consensus 414 l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~--~~~~~~~~ 483 (494)
++.++..+ ..+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++.. ...++.. ....+.+|
T Consensus 381 l~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~p 459 (475)
T 3b98_A 381 LNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNA-TVPLVDPSRYGFGILQP 459 (475)
T ss_dssp BCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTC-CCCCBCGGGTBEEECCB
T ss_pred cCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCC-CCCCCCcccccccccCC
Confidence 97543211 1235799999999999999999999999999999999999976521 1112222 12235566
Q ss_pred CCCeeEeeee
Q 011093 484 AQPLRVVPVA 493 (494)
Q Consensus 484 ~~~~~~~~~~ 493 (494)
+.++.+++|+
T Consensus 460 ~~~~~~~~~~ 469 (475)
T 3b98_A 460 AGDLEIRYRI 469 (475)
T ss_dssp SSCCEEEEEE
T ss_pred CCCceEEEEe
Confidence 6677666554
No 28
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=2.9e-63 Score=472.28 Aligned_cols=374 Identities=17% Similarity=0.241 Sum_probs=298.0
Q ss_pred CCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecC-CeeEEEeCCHHHHHHHHHhcCc-ccCCCCCccccccc-
Q 011093 31 LPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-QVTTVVISSATMAKQVLQDHDK-SLCNRNVPESVGSI- 107 (494)
Q Consensus 31 ~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-~~~~v~v~dp~~~~~i~~~~~~-~~~~~~~~~~~~~~- 107 (494)
.||||+++|++|++.. +|+..+.+++ +||||+++.++ |...++|++++.+++++.++.. .+..++........
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999764 7999999996 69999999864 5677789999999999986531 22222221111100
Q ss_pred --ccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHH
Q 011093 108 --QKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNS 185 (494)
Q Consensus 108 --~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~ 185 (494)
...+...++..+|+.|+++|+.+. +.|++++++.+.+.++++++++++.+.+...+++++|+...+...+.++++..
T Consensus 78 ~~~~~~~~~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~ 156 (404)
T 1jfb_A 78 KQAAKAKPTFVDMDPPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYT 156 (404)
T ss_dssp HHHTTSCCCGGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHH
T ss_pred cchhcccCcccccCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHH
Confidence 011222355668999999999998 89999999999999999999999999865434578999999999999999999
Q ss_pred HhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011093 186 IFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFA 265 (494)
Q Consensus 186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 265 (494)
+||.+++. .++.+....... . ..+ ..++..+..+.+.+++.+.+++++++
T Consensus 157 ~~G~~~~~------~~~~~~~~~~~~---~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~------- 206 (404)
T 1jfb_A 157 LLGVPFND------LEYLTQQNAIRT---N-----GSS---------TAREASAANQELLDYLAILVEQRLVE------- 206 (404)
T ss_dssp HHTCCGGG------HHHHHHHHHHHH---C-----TTS---------CHHHHHHHHHHHHHHHHHHHHHHHHS-------
T ss_pred HcCCCHHH------HHHHHHHHHHHh---c-----cCc---------chHHHHHHHHHHHHHHHHHHHHHHhC-------
Confidence 99987642 222222222110 0 001 12344556667778888888776542
Q ss_pred CchhHHHHHhcccc-CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccC
Q 011093 266 DSKDMLDTLLNISE-SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDIT 344 (494)
Q Consensus 266 ~~~d~~~~ll~~~~-~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 344 (494)
...|+++.|++... +..++++++.+++..+++||+|||+++++|++++|++||++|++|+++
T Consensus 207 ~~~d~l~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~----------------- 269 (404)
T 1jfb_A 207 PKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN----------------- 269 (404)
T ss_dssp CCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-----------------
T ss_pred CCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-----------------
Confidence 34589999996433 356999999999999999999999999999999999999999999983
Q ss_pred CChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCc
Q 011093 345 QLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRN 424 (494)
Q Consensus 345 ~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~ 424 (494)
.+|++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++..
T Consensus 270 -~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~~------- 341 (404)
T 1jfb_A 270 -PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQ------- 341 (404)
T ss_dssp -GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCSS-------
T ss_pred -hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCCC-------
Confidence 279999999999999999966789999999999999999999999999999999999999999999987532
Q ss_pred cccccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 425 FELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 425 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
.|+|||.|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 342 -~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 342 -DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp -CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred -CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 489999999999999999999999999999999 7998643
No 29
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=2e-63 Score=475.37 Aligned_cols=396 Identities=15% Similarity=0.184 Sum_probs=310.8
Q ss_pred CcccccccCCCCCcHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc--cccccccCCCCcc
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHG-PIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE--SVGSIQKDEYGIP 115 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 115 (494)
|++||+..+..+++.++.+++++|| |||+++++|.++++|+||++++.++. . ..|....... ....+ .+.+.+
T Consensus 9 P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~--~g~~~l 84 (417)
T 1izo_A 9 KSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSL--FGVNAI 84 (417)
T ss_dssp CCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTT--TCTTCG
T ss_pred CccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhh--ccccce
Confidence 8999999887889999999999998 99999988889999999999985543 2 2343322111 11111 133345
Q ss_pred cccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhcccccccC
Q 011093 116 WLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFSVDLADAN 195 (494)
Q Consensus 116 ~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~ 195 (494)
+..+|+.|+++|+.+. +.|++..++.+.+.+.+.++++++.|.+ ++++|+.+++..+++++++.+ ||.+++..
T Consensus 85 ~~~dg~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~- 157 (417)
T 1izo_A 85 QGMDGSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWEK----ADEVVLFEEAKEILCRVACYW-AGVPLKET- 157 (417)
T ss_dssp GGCCHHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH-HTCCCCTT-
T ss_pred eecCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-cCCCCCch-
Confidence 6778999999999998 8999999999999999999999998853 568999999999999999998 69887543
Q ss_pred cchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHh
Q 011093 196 SDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLL 275 (494)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll 275 (494)
...++.+.+..+...... ..| . ..+..+..+.+.+++.++++++++... .....|+++.|+
T Consensus 158 --~~~~~~~~~~~~~~~~~~-----~~~--------~-~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~d~l~~ll 218 (417)
T 1izo_A 158 --EVKERADDFIDMVDAFGA-----VGP--------R-HWKGRRARPRAEEWIEVMIEDARAGLL---KTTSGTALHEMA 218 (417)
T ss_dssp --THHHHHHHHHHHHHHTTC-----CSH--------H-HHHHHHHHHHHHHHHHHHHHHHHTTSS---CCCTTSHHHHHH
T ss_pred --HHHHHHHHHHHHHhhccc-----CCc--------c-chhHHHHHHHHHHHHHHHHHHHHhhcc---CCCcCCHHHHHH
Confidence 235555555544432211 111 1 123456667778888888877765321 113468999999
Q ss_pred ccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHH
Q 011093 276 NISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIV 353 (494)
Q Consensus 276 ~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i 353 (494)
+..+. ..++++++..++..++ ||++||+++++|++++|++||++|++|++| +++|+++||
T Consensus 219 ~~~~~~g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l~a~i 280 (417)
T 1izo_A 219 FHTQEDGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFV 280 (417)
T ss_dssp HCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHH
T ss_pred HhccccCCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHHHHHH
Confidence 86533 4588888877776654 899999999999999999999999999998 469999999
Q ss_pred HHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCC
Q 011093 354 KETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAG 433 (494)
Q Consensus 354 ~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G 433 (494)
+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|||+||++.+ .....|+|||.|
T Consensus 281 ~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~~~~FG~G 355 (417)
T 1izo_A 281 QEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE----ENLFDMIPQGGG 355 (417)
T ss_dssp HHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC----CCSSSCCTTCSS
T ss_pred HHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC----CCCcceeCCCCC
Confidence 999999999997 679999999999999999999999999999999999999999999998643 234579999999
Q ss_pred ----CCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 434 ----RRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 434 ----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
+|.|+|++||.+|++++++.|+++|++++.++ +..+.. ..++..|+.++.++.+
T Consensus 356 ~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~----~~~~~~-~~~~~~p~~~~~~~~~ 413 (417)
T 1izo_A 356 HAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ----SLHYSL-ARMPSLPESGFVMSGI 413 (417)
T ss_dssp CTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSC----CCCCCS-SSSSCCCTTCCEEEEE
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCC----CcCccc-ccCCCCCCCCceEeee
Confidence 59999999999999999999999999998654 222221 2345556656555543
No 30
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=2.7e-63 Score=471.56 Aligned_cols=365 Identities=19% Similarity=0.243 Sum_probs=297.3
Q ss_pred CCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEe----c-CC-eeEEEeCCHHHHHHHH-HhcCcccCCCCC
Q 011093 28 SRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLK----F-GQ-VTTVVISSATMAKQVL-QDHDKSLCNRNV 100 (494)
Q Consensus 28 ~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~----~-g~-~~~v~v~dp~~~~~i~-~~~~~~~~~~~~ 100 (494)
..+.||||+++|+. +..+++.++.++ ++|||||+++ + ++ .++++|+||+++++|+ .++. +.+++.
T Consensus 8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~~ 79 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRPQ 79 (406)
T ss_dssp CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCCC
T ss_pred CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--cccccc
Confidence 46679999999976 467899999999 9999999999 6 78 8999999999999999 5432 433332
Q ss_pred ccccc-ccc---cCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHH
Q 011093 101 PESVG-SIQ---KDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFD 176 (494)
Q Consensus 101 ~~~~~-~~~---~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~ 176 (494)
..... .+. ..+.+ ++..+|+.|+++|+.+. +.|++..++.+.+.+.++++.+++.+.+ +++++|+.+++..
T Consensus 80 ~~~~~~~~~~~~~~~~~-l~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~ 154 (406)
T 1ued_A 80 FTQSKSGAHVEAQFVGQ-ISTYDPPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEA---EGPSADLQGLFAD 154 (406)
T ss_dssp C---------CGGGTTC-GGGCCTTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCTTEEHHHHTHH
T ss_pred ccccccccccccccccc-cccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHH
Confidence 11100 010 01223 45678999999999998 8999999999999999999999999974 3568999988765
Q ss_pred -HHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 177 -TVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQR 255 (494)
Q Consensus 177 -~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 255 (494)
+++++++ .+||.+... ..++.+....+... . . ..++..+..+.+.+++.+.++++
T Consensus 155 ~~~~~vi~-~~~G~~~~~-----~~~~~~~~~~~~~~-------~-------~----~~~~~~~~~~~~~~~~~~~i~~r 210 (406)
T 1ued_A 155 PVGAHALC-ELLGIPRDD-----QREFVRRIRRNADL-------S-------R----GLKARAADSAAFNRYLDNLLARQ 210 (406)
T ss_dssp HHHHHHHH-HHHTCCHHH-----HHHHHHHHHHCC-----------------C----CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHH-HHcCCCHHH-----HHHHHHHHHHHHhc-------c-------C----CHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 579987532 13333333322110 0 0 01345566677778888888776
Q ss_pred HHHHhhcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCC
Q 011093 256 LEQRQEHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKG 335 (494)
Q Consensus 256 ~~~~~~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~ 335 (494)
+++ ...|+++.|++.. +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+.
T Consensus 211 ~~~-------~~~d~l~~ll~~~-~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------ 276 (406)
T 1ued_A 211 RAD-------PDDGLLGMIVRDH-GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE------ 276 (406)
T ss_dssp HHS-------CCSSHHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH------
T ss_pred HhC-------CCCCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH------
Confidence 542 3458999999865 45699999999999999999999999999999999999999999999874
Q ss_pred CCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccC
Q 011093 336 NLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLG 415 (494)
Q Consensus 336 ~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~ 415 (494)
+++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||-
T Consensus 277 ------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~- 343 (406)
T 1ued_A 277 ------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAA- 343 (406)
T ss_dssp ------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-
T ss_pred ------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCC-
Confidence 5999999999999999976789999999999999999999999999999999999999999999981
Q ss_pred CCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 416 SDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 416 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
..|+|||.|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 344 ---------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 385 (406)
T 1ued_A 344 ---------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVP 385 (406)
T ss_dssp ---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred ---------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCC
Confidence 2689999999999999999999999999999999 7998643
No 31
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=8.6e-63 Score=470.73 Aligned_cols=401 Identities=16% Similarity=0.202 Sum_probs=315.4
Q ss_pred CCCCCCCCcccccccCCCCCcHHHHHHHHhh-CCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc--cccccc
Q 011093 32 PPGPTPLPIIGNLLELGHKPHKSLAELAKVH-GPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE--SVGSIQ 108 (494)
Q Consensus 32 pp~p~~~p~lG~~~~~~~~~~~~~~~~~~ky-G~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~--~~~~~~ 108 (494)
|||| |++||+.++..+|+.++.+++++| ||||++.+++.+.++|++|+.++ ++.+. ..|....... .....
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~- 77 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTL- 77 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTT-
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhc-
Confidence 5666 899999988788999999999999 79999998888999999999987 66543 3454432211 11111
Q ss_pred cCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhc
Q 011093 109 KDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFS 188 (494)
Q Consensus 109 ~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG 188 (494)
.+.+.++..+|+.|+++|+.+. +.|+++.++.+.+.+.+.++++++.|.+ ++++|+.+++..+++++++.+ ||
T Consensus 78 -~g~~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~G 150 (415)
T 3awm_A 78 -LGQGGVQGLDGETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-AG 150 (415)
T ss_dssp -SCSSSGGGCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-HT
T ss_pred -cCCcceeecCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-cC
Confidence 1333456778999999999998 9999999999999999999999999964 357999999999999999998 89
Q ss_pred ccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCch
Q 011093 189 VDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSK 268 (494)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 268 (494)
.+++.. +..++.+.+..+..... . + .+ ...+..+..+.+.+++.+.++++++... .....
T Consensus 151 ~~~~~~---~~~~~~~~~~~~~~~~~---------~---~-~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~ 210 (415)
T 3awm_A 151 VPLPDD---EAGNRAGELRALFDAAG---------S---A-SP-RHLWSRLARRRVDAWAKRIIEGIRAGSI---GSGSG 210 (415)
T ss_dssp CCCCGG---GHHHHHHHHHHHHHSTT---------C---S-SH-HHHHHHHHHHHHHHHHHHHHHHHHHTSS---CCCTT
T ss_pred CCCCcc---hHHHHHHHHHHHHHHhc---------c---c-Cc-hHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCCC
Confidence 887542 23444444444332111 0 0 01 1234556677788888888887765421 11345
Q ss_pred hHHHHHhccccC--CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCC
Q 011093 269 DMLDTLLNISES--EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQL 346 (494)
Q Consensus 269 d~~~~ll~~~~~--~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l 346 (494)
|+++.|++..++ ..++++++..++..++ ||++||+++++|++++|++||++|++|++| +
T Consensus 211 d~l~~ll~~~~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~ 271 (415)
T 3awm_A 211 TAAYAIAWHRDRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------P 271 (415)
T ss_dssp SHHHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------T
T ss_pred CHHHHHHhhhhccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------H
Confidence 899999986533 4588888887777655 999999999999999999999999999997 5
Q ss_pred hhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccc
Q 011093 347 PYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFE 426 (494)
Q Consensus 347 ~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~ 426 (494)
+|+++||+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|||+||++.+ .....
T Consensus 272 ~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~ 346 (415)
T 3awm_A 272 DYAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD----EDSFN 346 (415)
T ss_dssp THHHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC----CCSSS
T ss_pred HHHHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC----CCCCC
Confidence 8999999999999999997 679999999999999999999999999999999999999999999998643 13347
Q ss_pred cccCCCC----CCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeeeeC
Q 011093 427 LIPFGAG----RRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVAI 494 (494)
Q Consensus 427 ~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (494)
|+|||.| +|.|+|++||.+|++++++.|+++|++++.++ +..+.. ..++..|+.++.++.++|
T Consensus 347 ~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~----~~~~~~-~~~~~~p~~~~~~~~~~~ 413 (415)
T 3awm_A 347 FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ----DLSIDF-ARLPALPKSGFVMRNVHI 413 (415)
T ss_dssp CCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSC----CCCBCT-TSSSCCBTTCCEEEEEES
T ss_pred ccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCC----CCCcCc-CCCccccCCCceEEEEeC
Confidence 9999999 59999999999999999999999999998654 222321 345667888999998875
No 32
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=9e-62 Score=462.00 Aligned_cols=370 Identities=20% Similarity=0.241 Sum_probs=297.8
Q ss_pred CCCCCCCCCCCcccccccCCCCCcHHHHHHHHhh-CCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccc
Q 011093 29 RKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVH-GPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGS 106 (494)
Q Consensus 29 ~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~ky-G~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 106 (494)
...||+|+++|.+.....+..+++..+.++ ++| ||||++++ |+.++++|+||+++++|+.++. +.+++....+..
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~ 80 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPA 80 (412)
T ss_dssp ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCC
T ss_pred CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccc
Confidence 345777888886654455678899999999 788 99999997 8899999999999999998643 333322111111
Q ss_pred cc-----c-CCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHH
Q 011093 107 IQ-----K-DEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAF-DTVV 179 (494)
Q Consensus 107 ~~-----~-~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~ 179 (494)
.. . ...+.++..+|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+.+ .++++|+...+. .+++
T Consensus 81 ~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~ 156 (412)
T 2zbx_A 81 TSPRFEAVRESPQAFIGLDPPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLA---AGPTADLVSQFALPVPS 156 (412)
T ss_dssp CSGGGC----CCCCGGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHH
T ss_pred cccccccccccccccccCCcHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHH
Confidence 10 0 0112345678999999999998 8899999999999999999999999974 356899998876 4899
Q ss_pred HHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 180 NLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQR 259 (494)
Q Consensus 180 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (494)
++++. +||.+.+. ...+.+....+... . .. ++..+..+.+.+++.+.+++++++
T Consensus 157 ~vi~~-~~G~~~~~-----~~~~~~~~~~~~~~---------~-------~~---~~~~~~~~~~~~~~~~~i~~r~~~- 210 (412)
T 2zbx_A 157 MVICR-LLGVPYAD-----HEFFQDASKRLVQS---------T-------DA---QSALTARNDLAGYLDGLITQFQTE- 210 (412)
T ss_dssp HHHHH-HHTCCGGG-----HHHHHHHHHHHHHC---------S-------SH---HHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHH-HcCCCHHH-----HHHHHHHHHHHhcc---------C-------cH---HHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 99996 79987642 23444444433220 0 01 344566667777888888776542
Q ss_pred hhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCC
Q 011093 260 QEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLI 338 (494)
Q Consensus 260 ~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~ 338 (494)
...|+++.|++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|++
T Consensus 211 ------~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~--------- 275 (412)
T 2zbx_A 211 ------PGAGLVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS--------- 275 (412)
T ss_dssp ------CCSSHHHHHHHTTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------
T ss_pred ------CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH---------
Confidence 235899999987543 5699999999999999999999999999999999999999999999853
Q ss_pred CccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCC
Q 011093 339 EESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDV 418 (494)
Q Consensus 339 ~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~ 418 (494)
|++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 276 ---------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---- 342 (412)
T 2zbx_A 276 ---------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA---- 342 (412)
T ss_dssp ---------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----
T ss_pred ---------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCC----
Confidence 6999999999999999966789999999999999999999999999999999999999999999971
Q ss_pred CCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 419 DVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 419 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
..|+|||.|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 343 ------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 384 (412)
T 2zbx_A 343 ------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVP 384 (412)
T ss_dssp ------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred ------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence 2689999999999999999999999999999999 7998653
No 33
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=6.5e-64 Score=473.66 Aligned_cols=381 Identities=18% Similarity=0.266 Sum_probs=294.2
Q ss_pred CCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCC-CcccccccccCCC
Q 011093 34 GPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRN-VPESVGSIQKDEY 112 (494)
Q Consensus 34 ~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 112 (494)
.+...|++||+..+..+++.++.+++++|||||+ ++|+.++++|+||+++++|+.++ .|.+++ .......+. +.
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GR 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CS
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CC
Confidence 3455899999988877889999999999999999 99999999999999999999865 566554 221111221 34
Q ss_pred CcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccccc
Q 011093 113 GIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFSVDLA 192 (494)
Q Consensus 113 ~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~ 192 (494)
++ +..+|+.|+++|+.+. +.|++++++.+.+.+.+.++.+++.+. ++++|+.+++..+++++++.++||.+++
T Consensus 78 ~l-~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG~~~~ 150 (389)
T 1n97_A 78 GL-LTDWGESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFGKPLS 150 (389)
T ss_dssp ST-TTCCHHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cc-ccCCcHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcCCcch
Confidence 44 4567999999999998 899999999999999999999998774 5689999999999999999999999886
Q ss_pred ccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHH
Q 011093 193 DANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLD 272 (494)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~ 272 (494)
+ ++.+.+..+...... ..++.+.+++. ...++..+..+.+.+++.+.++ ..
T Consensus 151 ~-------~~~~~~~~~~~~~~~----~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~------------~r----- 201 (389)
T 1n97_A 151 P-------SLAEHALKALDRIMA----QTRSPLALLDL-AAEARFRKDRGALYREAEALIV------------HP----- 201 (389)
T ss_dssp H-------HHHHHHHHHHHHHHH----HHHCGGGGGCH-HHHHHHHHHHHHHHHHHGGGTT------------ST-----
T ss_pred H-------HHHHHHHHHHHHHHH----HHhhHHHhcCC-chhHHHHHHHHHHHHHHHHHHH------------HH-----
Confidence 1 333333333322210 01111122211 1112222333333332222221 11
Q ss_pred HHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHH
Q 011093 273 TLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTI 352 (494)
Q Consensus 273 ~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~ 352 (494)
|+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+. ||
T Consensus 202 -ll-----~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~ 257 (389)
T 1n97_A 202 -PL-----SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AA 257 (389)
T ss_dssp -TG-----GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HH
T ss_pred -hc-----ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HH
Confidence 22 3589999999999999999999999999999999999999999999998753 89
Q ss_pred HHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCC
Q 011093 353 VKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGA 432 (494)
Q Consensus 353 i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~ 432 (494)
|+|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++||| +|+||++|+|+||++.. ......|+|||.
T Consensus 258 i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~---~~~~~~~~~FG~ 331 (389)
T 1n97_A 258 FQEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER---GTPSGRYFPFGL 331 (389)
T ss_dssp HHHHHHHSCSSCC-EEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC---CCCBTTBCTTCC
T ss_pred HHHHHhcCCCccc-cceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC---CCCCCCccCCCC
Confidence 9999999999997 48999999999999999999999999999999 99999999999998641 123457999999
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhhhceeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 433 GRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 433 G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
|+|.|+|++||.+|++++++.|+++|++++.++. .. ..+.+..|..++.++.+
T Consensus 332 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~----~~~~~~~p~~~~~v~~~ 384 (389)
T 1n97_A 332 GQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFP---RV----LAQVTLRPEGGLPARPR 384 (389)
T ss_dssp STTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCC---CE----EESSSEEETTCCEECCB
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCC---cc----cceEEeeeCCCceEEEe
Confidence 9999999999999999999999999999987652 21 23445555555555443
No 34
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=3.4e-62 Score=467.66 Aligned_cols=381 Identities=18% Similarity=0.196 Sum_probs=294.6
Q ss_pred CCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCC-
Q 011093 28 SRKLPPGPTPLPIIGNLLELG-----HKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNV- 100 (494)
Q Consensus 28 ~~~~pp~p~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~- 100 (494)
.++.||| ++|++.+.. .+++..+.++++ ||||+++++ |+.++++|+++++++++++++ ..|..++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence 4566777 889866552 357888988876 799999997 678999999999999999754 45666553
Q ss_pred cccc---c-c-c---cc---CCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCcee
Q 011093 101 PESV---G-S-I---QK---DEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPID 169 (494)
Q Consensus 101 ~~~~---~-~-~---~~---~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd 169 (494)
.... . . + .. .....++..+|+.|+++|+.++ +.|+++.++.+.+.++++++.+++.+.+ .++++|
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d 152 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLD---FDGECD 152 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHT---SSSEEE
T ss_pred ccCCcccccchhccccccccccccccccCChHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHH---hCCCee
Confidence 2211 1 1 1 11 0112345667999999999998 8999999999999999999999999974 335799
Q ss_pred hhHH-HHHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHH
Q 011093 170 VGQA-AFDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVL 248 (494)
Q Consensus 170 ~~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~ 248 (494)
+... ...+++++++.+ ||.+.+.. .++.+....+.... ......+|++..+ .....++..+..+.+.+++
T Consensus 153 ~~~~~~~~~~~~vi~~~-fG~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~ 223 (428)
T 1cpt_A 153 FMTDCALYYPLHVVMTA-LGVPEDDE-----PLMLKLTQDFFGVH--EPDEQAVAAPRQS-ADEAARRFHETIATFYDYF 223 (428)
T ss_dssp HHHHTTTTHHHHHHHHH-HTCCGGGH-----HHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhhHHHHHHHH-cCCCHhHH-----HHHHHHHHHHHhcc--ccccccccccccc-chhhHHHHHHHHHHHHHHH
Confidence 9754 567999999999 99876432 33333322221100 0011233444322 1122234556666677777
Q ss_pred HHHHHHHHHHHhhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHH
Q 011093 249 DRFIDQRLEQRQEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLE 327 (494)
Q Consensus 249 ~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 327 (494)
.+.+++++++ ...|+++.|++...+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|
T Consensus 224 ~~~i~~r~~~-------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E 296 (428)
T 1cpt_A 224 NGFTVDRRSC-------PKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD 296 (428)
T ss_dssp HHHHHHHTTS-------CCSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
T ss_pred HHHHHHHHcC-------CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHh
Confidence 7777665431 345899999987544 45999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCC
Q 011093 328 LEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYS 407 (494)
Q Consensus 328 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~ 407 (494)
++ |++|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus 297 ~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 357 (428)
T 1cpt_A 297 PA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDE 357 (428)
T ss_dssp GG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTS
T ss_pred HH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhh
Confidence 74 799999999999999985 78999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhce-eecCC
Q 011093 408 FKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFD-WKLDN 464 (494)
Q Consensus 408 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~ 464 (494)
|+|+||.. .|+|||.|+|.|+|++||.+|++++++.|+++|+ +++.+
T Consensus 358 F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 405 (428)
T 1cpt_A 358 FDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG 405 (428)
T ss_dssp CCTTCCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS
T ss_pred cCCCCCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence 99999941 3899999999999999999999999999999997 78753
No 35
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=4.6e-61 Score=455.76 Aligned_cols=353 Identities=19% Similarity=0.261 Sum_probs=288.6
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCC--c-cccccccc--CCCCcccccC
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNV--P-ESVGSIQK--DEYGIPWLPV 119 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~ 119 (494)
.+..+++.++.++ ++||||+++++ |+.++++|+||+++++++.++ .|.+++. . .....+.. .+.+ ++..+
T Consensus 16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 91 (403)
T 3aba_A 16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGS-LLWQD 91 (403)
T ss_dssp SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTC-CTTCC
T ss_pred ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccc-cccCC
Confidence 4567899999999 89999999997 889999999999999999864 3555431 1 11111111 1334 45668
Q ss_pred ChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcch
Q 011093 120 STKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDS 198 (494)
Q Consensus 120 ~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~ 198 (494)
|+.|+++|+.+. +.|+++.++.+.+.+.+.++.+++.+.+ .++++|+...+ ..+++++++. +||.+...
T Consensus 92 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----- 161 (403)
T 3aba_A 92 EPEHTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVER----- 161 (403)
T ss_dssp TTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-----
T ss_pred chhHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-----
Confidence 999999999998 8899999999999999999999999974 25689998665 5799999997 79987642
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccc
Q 011093 199 AREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNIS 278 (494)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~ 278 (494)
...+.+....+.. . . . .+ ++..+..+.+.+++.+.+++++++ ...|+++.|++..
T Consensus 162 ~~~~~~~~~~~~~---~---~--~-------~p---~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~ 216 (403)
T 3aba_A 162 RAEFQDIAEAMMR---V---D--Q-------DA---AATEAAGMRLGGLLYQLVQERRAN-------PGDDLISALITTE 216 (403)
T ss_dssp HHHHHHHHHHHSB---S---S--S-------CH---HHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSC
T ss_pred HHHHHHHHHHHHh---c---c--C-------cH---HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhc
Confidence 1333333322211 0 0 0 01 345566677778888888776543 3358999999875
Q ss_pred cC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHh
Q 011093 279 ES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETL 357 (494)
Q Consensus 279 ~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l 357 (494)
++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+|
T Consensus 217 ~~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l 278 (403)
T 3aba_A 217 DPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS------------------LVGNAVEELL 278 (403)
T ss_dssp CTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHH
Confidence 43 4699999999999999999999999999999999999999999999953 6999999999
Q ss_pred hcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCC
Q 011093 358 RLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRIC 437 (494)
Q Consensus 358 Rl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C 437 (494)
|++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..|+|||.|+|.|
T Consensus 279 Rl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C 348 (403)
T 3aba_A 279 RYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------APHLAFGFGAHQC 348 (403)
T ss_dssp HHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------CCCSTTCCGGGSC
T ss_pred hcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC----------CCccCCCCCCccC
Confidence 999999966789999999999999999999999999999999999999999999983 2589999999999
Q ss_pred CChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 438 PGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 438 ~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
+|++||.+|++++++.|+++| ++++.++
T Consensus 349 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 377 (403)
T 3aba_A 349 IGQQLARIELQIVFETLFRRLPGLRLAKP 377 (403)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCceecCC
Confidence 999999999999999999999 6888654
No 36
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=4.5e-61 Score=456.32 Aligned_cols=366 Identities=20% Similarity=0.235 Sum_probs=292.7
Q ss_pred CCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEec-CCee-EEEeCCHHHHHHHHHhcCcccCCCCCccccc-
Q 011093 29 RKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKF-GQVT-TVVISSATMAKQVLQDHDKSLCNRNVPESVG- 105 (494)
Q Consensus 29 ~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~-~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~- 105 (494)
.+.+|+|+.+|+.++ +..+|+.++.+++ +|||||++++ +|.+ +++|+||+++++|+.+ ..|.+++......
T Consensus 7 ~~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~ 80 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVT 80 (406)
T ss_dssp -CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBC
T ss_pred hhhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCcc
Confidence 466788887888766 4578999999995 7999999996 6666 9999999999999985 3465554322111
Q ss_pred ---c-cccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHH
Q 011093 106 ---S-IQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVN 180 (494)
Q Consensus 106 ---~-~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~ 180 (494)
. ....+.+ ++..+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+ .++++|+...+ ..++++
T Consensus 81 ~~~~~~~~~~~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~ 155 (406)
T 1s1f_A 81 RLAPHFIPARGA-VGFLDPPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLR---AGPPADLTEAVLSPFPIA 155 (406)
T ss_dssp BSSSSCSSCTTS-GGGCCTTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHHH
T ss_pred cccccccccccc-cccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHHH
Confidence 1 1111334 45568999999999998 8899999999999999999999999974 24689988666 579999
Q ss_pred HHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011093 181 LLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQ 260 (494)
Q Consensus 181 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 260 (494)
+++. +||.+++.. ..+.+....+..... | .++..+..+.+.+++.+.++++++.
T Consensus 156 vi~~-~~G~~~~~~-----~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~i~~r~~~-- 209 (406)
T 1s1f_A 156 VICE-LMGVPATDR-----HSMHTWTQLILSSSH--------G----------AEVSERAKNEMNAYFSDLIGLRSDS-- 209 (406)
T ss_dssp HHHH-HHTCCGGGH-----HHHHHHHHHHHHHHT--------T----------CCCCHHHHTHHHHHHHHHHHTSCCS--
T ss_pred HHHH-HhCCCHHHH-----HHHHHHHHHHHhccC--------C----------HHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 9998 699876431 334444433332211 1 0122344455666666666554321
Q ss_pred hcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCc
Q 011093 261 EHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEE 340 (494)
Q Consensus 261 ~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~ 340 (494)
...|+++.|++..++..++++++.+++..+++|| |||+++++|++++|++||++|+++++|++
T Consensus 210 -----~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------- 272 (406)
T 1s1f_A 210 -----AGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE----------- 272 (406)
T ss_dssp -----CCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-----------
T ss_pred -----CCCCHHHHHHHhhcccCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------
Confidence 3458999999875446799999999999999999 99999999999999999999999999963
Q ss_pred cccCCChhHHHHHHHHhhcCCCCC-CcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCC
Q 011093 341 SDITQLPYLQTIVKETLRLHPPVP-LLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVD 419 (494)
Q Consensus 341 ~~~~~l~~l~a~i~E~lRl~~~~~-~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~ 419 (494)
|++|||+|+||++|+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 273 -------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----- 340 (406)
T 1s1f_A 273 -------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP----- 340 (406)
T ss_dssp -------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-------
T ss_pred -------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC-----
Confidence 69999999999999999 45789999999999999999999999999999999999999999999995
Q ss_pred CCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 420 VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 420 ~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
..++|||.|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 341 -----~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (406)
T 1s1f_A 341 -----NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVA 382 (406)
T ss_dssp -----CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred -----CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCC
Confidence 1589999999999999999999999999999999 7999765
No 37
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=1.5e-60 Score=452.76 Aligned_cols=377 Identities=19% Similarity=0.247 Sum_probs=298.6
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-c----ccccccCCCCcccccCC
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-S----VGSIQKDEYGIPWLPVS 120 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~ 120 (494)
.+..+|+.++.++ ++|||||++++++.++++|+||+++++++.++. |.+++... . .......+.+ ++..+|
T Consensus 17 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g 92 (411)
T 3a4g_A 17 TFWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPM-MILMDP 92 (411)
T ss_dssp GGTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCC-GGGCCT
T ss_pred hhhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccc-cccCCc
Confidence 3567899999999 999999999999999999999999999998653 66554321 0 0011111333 456789
Q ss_pred hhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhH-HHHHHHHHHHHHHHhcccccccCcchH
Q 011093 121 TKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQ-AAFDTVVNLLSNSIFSVDLADANSDSA 199 (494)
Q Consensus 121 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~ 199 (494)
+.|+++|+.+. +.|+++.++.+.+.+.+.++.+++.+.+ ++++|+.. +...+++++++.+ ||.+.+. .
T Consensus 93 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-----~ 161 (411)
T 3a4g_A 93 PDHTRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAED-----R 161 (411)
T ss_dssp THHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG-----H
T ss_pred hHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH-----H
Confidence 99999999998 8999999999999999999999998853 35799974 4568999999974 9987642 1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcccc
Q 011093 200 REFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISE 279 (494)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~ 279 (494)
..+.+....+.. ..| + ++..+..+.+.+++.+.+++++++ ...|+++.|++..+
T Consensus 162 ~~~~~~~~~~~~---------~~p-------~---~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~ 215 (411)
T 3a4g_A 162 DDFSAWSSVLVD---------DSP-------A---DDKNAAMGKLHGYLSDLLERKRTE-------PDDALLSSLLAVSD 215 (411)
T ss_dssp HHHHHHHHHHTT---------SSC-------T---TTHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCC
T ss_pred HHHHHHHHHHhc---------cCC-------H---HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc
Confidence 334333332211 011 0 234456667778888888777552 34589999998754
Q ss_pred --CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHh
Q 011093 280 --SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETL 357 (494)
Q Consensus 280 --~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l 357 (494)
+..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+. |++|||+|+|
T Consensus 216 ~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l 277 (411)
T 3a4g_A 216 EDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS------------------LISSAVEEFL 277 (411)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH------------------HHHHHHHHHH
Confidence 24699999999999999999999999999999999999999999999963 7999999999
Q ss_pred hcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCC
Q 011093 358 RLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRIC 437 (494)
Q Consensus 358 Rl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C 437 (494)
|++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||. ..++|||.|+|.|
T Consensus 278 Rl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C 347 (411)
T 3a4g_A 278 RFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------SGGVFFGHGIHFC 347 (411)
T ss_dssp HHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTCC
T ss_pred HhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccC
Confidence 999999966789999999999999999999999999999999999999999999983 1589999999999
Q ss_pred CChHHHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093 438 PGLPLAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA 493 (494)
Q Consensus 438 ~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (494)
+|++||.+|++++++.|+++| ++++.++. ..+.+.....+......++.+++|.
T Consensus 348 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~~~~~~~~~~lpv~~~~r~ 402 (411)
T 3a4g_A 348 LGAQLARLEGRVAIGRLFADRPELALAVGL--DELVYRESTLVRGLSRMPVTMGPRS 402 (411)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBCCCTTBCCBSCCEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCcEECCCc--cccccccCccccCcceeEEEecCcc
Confidence 999999999999999999999 69987531 2233433333333445555555553
No 38
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=2.2e-61 Score=459.49 Aligned_cols=390 Identities=19% Similarity=0.234 Sum_probs=299.0
Q ss_pred cCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc
Q 011093 25 SKGSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV 104 (494)
Q Consensus 25 ~~~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 104 (494)
..++...+|||+. ..+++.++.++++ |||| ++++.++++|+|++++++++.++ ..|.+++... .
T Consensus 14 ~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~ 77 (411)
T 2jjn_A 14 TLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV-I 77 (411)
T ss_dssp ---CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGG-S
T ss_pred ccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCccccc-C
Confidence 3677888888882 2467889999976 9998 55667899999999999999864 3566654321 1
Q ss_pred cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHH
Q 011093 105 GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQA-AFDTVVNLLS 183 (494)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~ 183 (494)
......+. .++..+|+.|+++|+.+. +.|++..++.+.+.+++.++.+++. .++++|+... ...+++++++
T Consensus 78 ~~~~~~~~-~~~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~------~~~~~d~~~~~~~~~~~~vi~ 149 (411)
T 2jjn_A 78 EGASPTPG-MIHEIDPPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD------AGESFDLVDVLAFPLPVTIVA 149 (411)
T ss_dssp TTCCCCTT-CGGGCCTTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT------SCSEEEHHHHTTTHHHHHHHH
T ss_pred Cccccccc-ccccCCchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHHHHHHHH
Confidence 11111122 345668999999999998 8999999999999999999999887 2457999844 5689999999
Q ss_pred HHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011093 184 NSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHG 263 (494)
Q Consensus 184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 263 (494)
.+ ||.+.+..+ ++.+....+.... .|.+ + .+...++..+..+.+.+++.+.+++++++
T Consensus 150 ~~-fG~~~~~~~-----~~~~~~~~~~~~~--------~~~~--~-~p~~~~~~~~~~~~~~~~~~~~i~~r~~~----- 207 (411)
T 2jjn_A 150 EL-LGLPPMDHE-----QFGDWSGALVDIQ--------MDDP--T-DPALAERIADVLNPLTAYLKARCAERRAD----- 207 (411)
T ss_dssp HH-HTCCSCCCS-----TTCCHHHHHHHSC--------CSCT--T-CHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----
T ss_pred HH-cCCCHHHHH-----HHHHHHHHHHhcc--------Cccc--c-chHHHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 98 999875421 1222222222211 1111 0 01223455666777778888888776552
Q ss_pred CCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccc
Q 011093 264 FADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESD 342 (494)
Q Consensus 264 ~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 342 (494)
...|+++.|++...+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 208 --~~~d~l~~ll~~~~~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------- 272 (411)
T 2jjn_A 208 --PGDDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG------------- 272 (411)
T ss_dssp --CCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG-------------
T ss_pred --CCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------
Confidence 346899999987543 4699999999999999999999999999999999999999999999974
Q ss_pred cCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCC
Q 011093 343 ITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKG 422 (494)
Q Consensus 343 ~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~ 422 (494)
|++|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.+
T Consensus 273 -----~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------- 339 (411)
T 2jjn_A 273 -----RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG------- 339 (411)
T ss_dssp -----GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS-------
T ss_pred -----hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC-------
Confidence 799999999999999996 7899999999999999999999999999999999999999999999842
Q ss_pred CccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhce-eecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 423 RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFD-WKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 423 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
...|+|||.|+|.|+|++||.+|++++++.|+++|+ +++.++ ...+.............++.++|+
T Consensus 340 -~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~lpv~~~~~ 406 (411)
T 2jjn_A 340 -GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRD---DERLRHFEQIVLGTRHLPVLAGSS 406 (411)
T ss_dssp -SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCS---SCCCCBCCSSSSSBSCCEEECSCC
T ss_pred -CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCC---CceeccccccccCcceeEEEecCC
Confidence 125899999999999999999999999999999995 998643 122212222333444455555554
No 39
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=4.1e-61 Score=455.96 Aligned_cols=373 Identities=16% Similarity=0.160 Sum_probs=299.5
Q ss_pred cCCCCCcHHHHHHHHhh--CCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhH
Q 011093 46 ELGHKPHKSLAELAKVH--GPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKW 123 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~ky--G~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 123 (494)
.+..+++.++.+|+++| ||||++++++ ++++|+||+++++|++ +...|.+++........ ..+...++..+|+.|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~~~ 92 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYET-GEFELMMAGQDDPVH 92 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCC-cccccCcccCCchHH
Confidence 45678999999999999 9999999886 5899999999999995 44566665543321111 112334567789999
Q ss_pred HHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhcccccccCcchHHHH
Q 011093 124 KKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQA-AFDTVVNLLSNSIFSVDLADANSDSAREF 202 (494)
Q Consensus 124 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~ 202 (494)
+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+ ++++|+... ...+++++++. +||.+... ..++
T Consensus 93 ~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----~~~~ 161 (398)
T 4fb2_A 93 KKYRQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPED-----GDTY 161 (398)
T ss_dssp HHHHHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG-----HHHH
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH-----HHHH
Confidence 99999998 8999999999999999999999988753 346887554 46899999998 78976533 2444
Q ss_pred HHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-C
Q 011093 203 KDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-E 281 (494)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~ 281 (494)
.+....+.. +. ...+..+..+.+.+++.+.+++++++ ...|+++.|++...+ .
T Consensus 162 ~~~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~~ 215 (398)
T 4fb2_A 162 RRWVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRTN-------PGNDIMSRVIMSKIDGE 215 (398)
T ss_dssp HHHHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBTTB
T ss_pred HHHHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHcccCCC
Confidence 444444332 00 01245566777888888888777653 346999999987654 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCC
Q 011093 282 EIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHP 361 (494)
Q Consensus 282 ~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~ 361 (494)
.++++++..++..+++||+|||+++++|++++|++||++|+++++|++ +++|||+|+||++|
T Consensus 216 ~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p 277 (398)
T 4fb2_A 216 SLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LIPNAVDELLRFYG 277 (398)
T ss_dssp CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhCC
Confidence 599999999999999999999999999999999999999999999975 58999999999999
Q ss_pred CCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChH
Q 011093 362 PVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLP 441 (494)
Q Consensus 362 ~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 441 (494)
+++ ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..|+|||.|+|.|+|++
T Consensus 278 ~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~ 345 (398)
T 4fb2_A 278 PAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP----------NRHLSLGHGIHRCLGAH 345 (398)
T ss_dssp CBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCSTTCCTTHH
T ss_pred CcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC----------CCCCCCCCCCcCCCCHH
Confidence 998 679999999999999999999999999999999999999999999982 26899999999999999
Q ss_pred HHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 442 LAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 442 ~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
||.+|++++++.|+++| ++++.++. ...... .....+...++.++++
T Consensus 346 lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~-~~~~~~~~lpv~~~~~ 393 (398)
T 4fb2_A 346 LIRVEARVAITEFLKRIPEFSLDPNK---ECEWLM-GQVAGMLHVPIIFPKG 393 (398)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEECTTS---CCEEEC-SSBCEEEECEEECCCC
T ss_pred HHHHHHHHHHHHHHHhCCCcEECCCC---Cceecc-ccccccceeEEEEcCC
Confidence 99999999999999999 99998652 233322 1223334455555554
No 40
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=6e-63 Score=483.89 Aligned_cols=420 Identities=14% Similarity=0.143 Sum_probs=299.0
Q ss_pred ccCCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCC-ceEEecCCeeE-------EEeCCHHHHHHHHHh
Q 011093 24 FSKGSRKLPPGPTPLPIIGNLLEL-----GHKPHKSLAELAKVHGP-IMSLKFGQVTT-------VVISSATMAKQVLQD 90 (494)
Q Consensus 24 ~~~~~~~~pp~p~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~g~~~~-------v~v~dp~~~~~i~~~ 90 (494)
....+.+.||||+++|++|+++++ ..+++.++.++++|||+ ||++++++.++ +++.+++..+.++..
T Consensus 22 ~~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~ 101 (495)
T 3dsk_A 22 SKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDV 101 (495)
T ss_dssp --CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred CCCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccc
Confidence 345678899999999999999776 47889999999999999 99999988887 667777776666643
Q ss_pred cC----cccCCCCCcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCC
Q 011093 91 HD----KSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGE 166 (494)
Q Consensus 91 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 166 (494)
.. ..+... .......++......++..+|+.|+++|+++. +.|+... +.+.+.+++.++.+++.|.+...+++
T Consensus 102 ~~v~k~~~~~~~-~~~~~~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~ 178 (495)
T 3dsk_A 102 DKVEKKDLLTGT-YMPSTELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKELSLKG 178 (495)
T ss_dssp TTEECSSCTTSS-SCCCGGGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccc-CCCCccccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 21 111111 11112222111123345568999999999998 7788754 88999999999999999976444467
Q ss_pred ceehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHH-HHHHHHHH
Q 011093 167 PIDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRL-TRHYIKIL 245 (494)
Q Consensus 167 ~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~-~~~~~~~~ 245 (494)
++|+.+++..+++++++..+||.++...+ ....+.+.+..+..... .|.+... .+...... .+......
T Consensus 179 ~vdl~~~~~~~~~~~i~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~-------~p~~~~~-~p~~~~~~~~~~~~~~~ 248 (495)
T 3dsk_A 179 KADFGGSSDGTAFNFLARAFYGTNPADTK--LKADAPGLITKWVLFNL-------HPLLSIG-LPRVIEEPLIHTFSLPP 248 (495)
T ss_dssp SEESHHHHHHHHHHHHHHHHHSCCGGGST--TTTCHHHHHHHHHHHHH-------GGGCCCS-SCHHHHHHHHSSSCCCG
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCcchhh--hhhhHHHHHHHHHHHhh-------hhHhHhc-cHHHHHHHHHHhhcccc
Confidence 89999999999999999999999886542 11222222222221111 1211100 11000000 00000000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHH-HhcCCchHHHHHHHHHHHHh-CHHHHHH
Q 011093 246 EVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLF-AAGTETTSSTLEWAVTELLN-NSEALSK 323 (494)
Q Consensus 246 ~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~ 323 (494)
..+.+..++..+ ...+.++.+++..++.+++++|+..+++.++ +||++||+.+++|++++|+. ||++|++
T Consensus 249 ~~~~~~~~~~~~--------~~~~~~~~ll~~~~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~ 320 (495)
T 3dsk_A 249 ALVKSDYQRLYE--------FFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNR 320 (495)
T ss_dssp GGGHHHHHHHHH--------HHHHHCHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hhhhhhHHHHHH--------HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHH
Confidence 000000000000 0112333444444446799999998776665 99999999999999999996 9999999
Q ss_pred HHHHHHHhhCCC-CCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeec----cEEeCCCCEEEechhhhccC
Q 011093 324 ARLELEQKVGKG-NLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEIT----GFIIPKGAQVLVNAWAIGRD 398 (494)
Q Consensus 324 l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~----g~~ip~g~~v~~~~~~~~~d 398 (494)
|++|++++++++ ..++.+++.+||||+|||+|+||++|+++... |.+.+|+++. ||.||||+.|.++.+++|||
T Consensus 321 lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~d 399 (495)
T 3dsk_A 321 LAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399 (495)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHHHTC
T ss_pred HHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEEEeccHHhhCC
Confidence 999999998653 66899999999999999999999999999865 7799999994 99999999999999999999
Q ss_pred CCCCCCCCCCCCCCccCCCCCCC------CCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhceeecCCC
Q 011093 399 TSTWDDPYSFKPERFLGSDVDVK------GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFDWKLDNE 465 (494)
Q Consensus 399 ~~~~~~p~~F~p~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~ 465 (494)
|++|+||++|+|+||++.+++.. +....++|||+|+|.|+|++||.+|++++++.|+++|++...++
T Consensus 400 p~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 472 (495)
T 3dsk_A 400 PKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 472 (495)
T ss_dssp TTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence 99999999999999997432100 01113455566669999999999999999999999999877543
No 41
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=2.6e-61 Score=458.52 Aligned_cols=353 Identities=18% Similarity=0.245 Sum_probs=283.9
Q ss_pred ccCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccc---cccC---CCCcccc
Q 011093 45 LELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGS---IQKD---EYGIPWL 117 (494)
Q Consensus 45 ~~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~ 117 (494)
..+..+++..+.+| ++|||||++++ |+.++++|+||+++++|+.++. +.+.+....+.. +... ..+.++.
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIG 96 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTT
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccccccc
Confidence 34567899999999 99999999997 8889999999999999998643 333322011110 1100 1123456
Q ss_pred cCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHHHHHHHhcccccccCc
Q 011093 118 PVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAF-DTVVNLLSNSIFSVDLADANS 196 (494)
Q Consensus 118 ~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~ 196 (494)
.+|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+.+ +++++|+..++. .+++++++. +||.+...
T Consensus 97 ~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--- 168 (408)
T 3abb_A 97 VDDPVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYGD--- 168 (408)
T ss_dssp CCTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG---
T ss_pred CCchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH---
Confidence 78999999999998 8899999999999999999999999974 466899988776 588999987 79987642
Q ss_pred chHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhc
Q 011093 197 DSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLN 276 (494)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~ 276 (494)
...+.+....+... . .+ ++..+....+.+++.+.+++++++ ...|+++.|++
T Consensus 169 --~~~~~~~~~~~~~~------~--~~-----------~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~ 220 (408)
T 3abb_A 169 --HDFFEECSRNFVGA------A--TS-----------AEADAAFGELYTYLHGLVGRKQAE-------PEDGLLDELIA 220 (408)
T ss_dssp --HHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHH
T ss_pred --HHHHHHHHHHHhcc------c--ch-----------HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHh
Confidence 13344433332110 0 01 112234455667777777766542 23589999998
Q ss_pred cccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHH
Q 011093 277 ISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKE 355 (494)
Q Consensus 277 ~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E 355 (494)
..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+. |++|||+|
T Consensus 221 ~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E 282 (408)
T 3abb_A 221 RQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------------AVSGVVEE 282 (408)
T ss_dssp HHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------------HHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHH
Confidence 6543 5699999999999999999999999999999999999999999998864 69999999
Q ss_pred HhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCC
Q 011093 356 TLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRR 435 (494)
Q Consensus 356 ~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r 435 (494)
+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||- ..|+|||.|+|
T Consensus 283 ~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r 351 (408)
T 3abb_A 283 LLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA----------RHHVGFGHGIH 351 (408)
T ss_dssp HHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC----------TTCCTTCCGGG
T ss_pred HHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC----------CCCCCCCCCCc
Confidence 999999999 5789999999999999999999999999999999999999999999971 26899999999
Q ss_pred CCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 436 ICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 436 ~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
.|+|++||.+|++++++.|+++| ++++..+
T Consensus 352 ~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 382 (408)
T 3abb_A 352 QCLGQNLARAELEIALGGLFARIPGLRLAVP 382 (408)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCcCHHHHHHHHHHHHHHHHHhCccceecCC
Confidence 99999999999999999999999 8998643
No 42
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=6.7e-61 Score=455.75 Aligned_cols=378 Identities=24% Similarity=0.335 Sum_probs=296.7
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCC--cccccccc-----c---CCCCcc
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNV--PESVGSIQ-----K---DEYGIP 115 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~--~~~~~~~~-----~---~~~~~~ 115 (494)
.+..+++..+.++ ++||||+++++++.++++|+||+++++|+.++. +.+.+. ........ . .+. .+
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 87 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVE-NM 87 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCC-SG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccc-cc
Confidence 4567899999999 999999999988889999999999999997543 222221 01000000 0 122 34
Q ss_pred cccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHHHHHHHhccccccc
Q 011093 116 WLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAF-DTVVNLLSNSIFSVDLADA 194 (494)
Q Consensus 116 ~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~ 194 (494)
+..+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.|.+. .+++++|+.+++. .+++++++. +||.+...
T Consensus 88 ~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~- 163 (408)
T 1odo_A 88 FTAYGPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR- 163 (408)
T ss_dssp GGCCHHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-
T ss_pred cccCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-
Confidence 6678999999999998 89999999999999999999999999753 2367899998876 599999995 79987532
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHH
Q 011093 195 NSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTL 274 (494)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~l 274 (494)
..++.+....+.. . . . . .++..+....+.+++.+++++++++ ...|+++.|
T Consensus 164 ----~~~~~~~~~~~~~---~-~----------~-~---~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~l 214 (408)
T 1odo_A 164 ----RDGFRALVDGVFD---T-T----------L-D---QAEAQANTARLYEVLDQLIAAKRAT-------PGDDMTSLL 214 (408)
T ss_dssp ----HHHHHHHHHHHHC---T-T----------C-C---HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH
T ss_pred ----HHHHHHHHHHHhc---c-c----------C-C---HHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHH
Confidence 1334443333221 0 0 0 0 1344566677778888888776542 335899999
Q ss_pred hccccC----CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHH
Q 011093 275 LNISES----EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQ 350 (494)
Q Consensus 275 l~~~~~----~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~ 350 (494)
++...+ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+ .|++
T Consensus 215 l~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~ 276 (408)
T 1odo_A 215 IAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------------VTWA 276 (408)
T ss_dssp HHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------------SCHH
T ss_pred HHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHH
Confidence 986542 459999999999999999999999999999999999999999999973 3699
Q ss_pred HHHHHHhhcCCCCCCcCccccccceeec-cEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCcccccc
Q 011093 351 TIVKETLRLHPPVPLLLPRKASADVEIT-GFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIP 429 (494)
Q Consensus 351 a~i~E~lRl~~~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~ 429 (494)
|||+|+||++|+++..++|.+.+|++++ ||.||||+.|.++.+++||||++|+||++|+|+|+ ...|+|
T Consensus 277 a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~p 346 (408)
T 1odo_A 277 DVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT----------VKEHLA 346 (408)
T ss_dssp HHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CCCCCT
T ss_pred HHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CCCCCC
Confidence 9999999999999976789999999999 99999999999999999999999999999999994 126899
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 430 FGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 430 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
||.|+|.|+|++||.+|++++++.|+++| ++++..+. ....+.. +.+..+..++.++.+
T Consensus 347 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~--~~~~~~~~~l~v~~~ 406 (408)
T 1odo_A 347 FGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPA--EELPPVP--SLISNGHQRLPVLLH 406 (408)
T ss_dssp TCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTT--SCCCBCS--CSSBCCBSCCEEECC
T ss_pred CCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCc--ccccccc--CccccCcccceEEec
Confidence 99999999999999999999999999999 79986431 2233332 233444455555544
No 43
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=7.3e-61 Score=455.74 Aligned_cols=381 Identities=22% Similarity=0.302 Sum_probs=295.7
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccc---cc-ccCCCCcccccCCh
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVG---SI-QKDEYGIPWLPVST 121 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~ 121 (494)
.+..+|+.++.++ ++||||+++++++.++++|+||+++++++.++ ..+..++...... .. ...+.+ ++..+|+
T Consensus 10 ~~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~ 86 (404)
T 3ejb_B 10 EFLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQM-MLFQNQP 86 (404)
T ss_dssp HHHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTS-GGGCCTT
T ss_pred ccccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcc-hhhcCCc
Confidence 3346788999988 58999999999999999999999999999865 4565554321110 00 011233 4667899
Q ss_pred hHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhcccccccCcchHH
Q 011093 122 KWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQA-AFDTVVNLLSNSIFSVDLADANSDSAR 200 (494)
Q Consensus 122 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~ 200 (494)
.|+++|+.++ +.|++..++.+.+.+.++++.+++.+. .++++|+... ...++.++++. +||.+.... .
T Consensus 87 ~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~ 155 (404)
T 3ejb_B 87 DHRRLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQ----GKKKMEVISDFAFPLASFVIAN-IIGVPEEDR-----E 155 (404)
T ss_dssp HHHHHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTT----TTSEEEHHHHTHHHHHHHHHHH-HHTCCGGGH-----H
T ss_pred hHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhh----hcCCcchHHHHHHHHHHHHHHH-HcCCCHHHH-----H
Confidence 9999999998 899999999999999999999999885 3567897554 55689999988 589775431 3
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC
Q 011093 201 EFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES 280 (494)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~ 280 (494)
.+.+....+..... .|.. ....++..+..+.+.+++.+.++++++. ...|+++.|+...++
T Consensus 156 ~~~~~~~~~~~~~~-------~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~ 216 (404)
T 3ejb_B 156 QLKEWAASLIQTID-------FTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH-------PQQDMISMLLKGREK 216 (404)
T ss_dssp HHHHHHHHHHGGGS-------TTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHC---
T ss_pred HHHHHHHHHHHhcc-------CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CcchHHHHHHhcccC
Confidence 33333333322111 1211 1223455666777778888888776542 456899999933333
Q ss_pred CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcC
Q 011093 281 EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLH 360 (494)
Q Consensus 281 ~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 360 (494)
..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |+++||+|+||++
T Consensus 217 ~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~ 278 (404)
T 3ejb_B 217 DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTAVEECLRYE 278 (404)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhC
Confidence 6799999999999999999999999999999999999999999999974 6999999999999
Q ss_pred CCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCCh
Q 011093 361 PPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGL 440 (494)
Q Consensus 361 ~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~ 440 (494)
|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..++|||.|+|.|+|+
T Consensus 279 p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~----------~~~~~Fg~G~r~C~G~ 347 (404)
T 3ejb_B 279 SPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP----------NPHLSFGHGHHVCLGS 347 (404)
T ss_dssp CSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTCCTTH
T ss_pred Cccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC----------CCCCCCCCcCccCcCH
Confidence 9999 5789999999999999999999999999999999999999999999982 1589999999999999
Q ss_pred HHHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 441 PLAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 441 ~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
+||.+|++++++.|+++| ++++.++ +..+.....+......++.++||
T Consensus 348 ~lA~~e~~~~l~~ll~~f~~~~l~~~----~~~~~~~~~~~~~~~lpv~~~~~ 396 (404)
T 3ejb_B 348 SLARLEAQIAINTLLQRMPSLNLADF----EWRYRPLFGFRALEELPVTFEAS 396 (404)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEC------CCCBCSCSSBCCBSCCEEECC--
T ss_pred HHHHHHHHHHHHHHHHhCcccccCCC----CceeccCcccCCcceeEEEEecc
Confidence 999999999999999999 9999754 23444343444445556666654
No 44
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=8e-60 Score=448.28 Aligned_cols=354 Identities=19% Similarity=0.253 Sum_probs=287.5
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCCc-cccccccc--CCCCcccccCCh
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNVP-ESVGSIQK--DEYGIPWLPVST 121 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~ 121 (494)
.+..+|+.++.++ ++||||+++++ |+.++++|+||+++++|+.++ .|.+++.. .....+.. .+.+ ++..+|+
T Consensus 34 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~-l~~~dg~ 109 (417)
T 2y5n_A 34 VHGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGG-LLSMDPP 109 (417)
T ss_dssp SSSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCS-GGGCCTT
T ss_pred hhccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccccccc-CccCCch
Confidence 4567899999999 89999999997 789999999999999999864 35444322 11111111 1333 4567899
Q ss_pred hHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchHH
Q 011093 122 KWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSAR 200 (494)
Q Consensus 122 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~ 200 (494)
.|+++|+.+. +.|+++.++.+.+.+.+.++++++.+.+ ++.++|+...+ ..+++++++. +||.+++. ..
T Consensus 110 ~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-----~~ 179 (417)
T 2y5n_A 110 EHSRLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSAD-----HD 179 (417)
T ss_dssp HHHHHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG-----HH
T ss_pred HHHHHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH-----HH
Confidence 9999999998 8899999999999999999999999974 22379998766 4699999997 69987642 13
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC
Q 011093 201 EFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES 280 (494)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~ 280 (494)
.+.+....+ .. .+ . .+ .++..+..+.+.+++.+.++++++. ...|+++.|++..++
T Consensus 180 ~~~~~~~~~----~~-----~~---~---~~--~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~ 235 (417)
T 2y5n_A 180 RFTRWSGAF----LS-----TA---E---VT--AEEMQEAAEQAYAYMGDLIDRRRKE-------PTDDLVSALVQARDQ 235 (417)
T ss_dssp HHHHHHHTT----ST-----TC---C---CC--HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBT
T ss_pred HHHHHHHHH----hc-----cc---C---CC--HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhcc
Confidence 333322211 10 00 0 01 1345566677778888888776542 345899999987543
Q ss_pred -CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhc
Q 011093 281 -EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRL 359 (494)
Q Consensus 281 -~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl 359 (494)
..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+||+
T Consensus 236 ~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl 297 (417)
T 2y5n_A 236 QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE------------------LIPSAVEELTRW 297 (417)
T ss_dssp TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHh
Confidence 4699999999999999999999999999999999999999999999953 699999999999
Q ss_pred CCCCC-CcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCC
Q 011093 360 HPPVP-LLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICP 438 (494)
Q Consensus 360 ~~~~~-~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 438 (494)
+|+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..++|||.|+|.|+
T Consensus 298 ~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~ 367 (417)
T 2y5n_A 298 VPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----------NQHLGFGHGVHHCL 367 (417)
T ss_dssp CCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------CCCCTTCCSTTSCT
T ss_pred cCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------CCcCCCCCCCcCCc
Confidence 99999 45789999999999999999999999999999999999999999999983 25899999999999
Q ss_pred ChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 439 GLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 439 G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
|++||.+|++++++.|+++| ++++.++
T Consensus 368 G~~lA~~e~~~~la~ll~~f~~~~l~~~ 395 (417)
T 2y5n_A 368 GAPLARVELQVALEVLLQRLPGIRLGIP 395 (417)
T ss_dssp THHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CHHHHHHHHHHHHHHHHHhCCCcEeCCC
Confidence 99999999999999999999 5898754
No 45
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=7.3e-61 Score=455.25 Aligned_cols=355 Identities=21% Similarity=0.284 Sum_probs=287.9
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCC-Ccccc--cccccC-------C-CC
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRN-VPESV--GSIQKD-------E-YG 113 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~~~~--~~~~~~-------~-~~ 113 (494)
.+..+++..+.++ ++||||+++++ |+.++++|+||+++++|+.++. +.+.+ ..... ...... . .+
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 4567899999999 99999999997 8899999999999999998653 22222 00000 000000 1 12
Q ss_pred cccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHHHHHHHhccccc
Q 011093 114 IPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAF-DTVVNLLSNSIFSVDLA 192 (494)
Q Consensus 114 ~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~ 192 (494)
.++..+|+.|+++|+.+. +.|+++.++.+.+.+.+.++.+++.|.+ .++++|+..++. .+++++++. +||.+..
T Consensus 91 ~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 165 (411)
T 1gwi_A 91 SMLTVDGAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA 165 (411)
T ss_dssp SGGGCCHHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred ccccCCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCHH
Confidence 346678999999999998 8999999999999999999999998852 367899988776 599999995 7998764
Q ss_pred ccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHH
Q 011093 193 DANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLD 272 (494)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~ 272 (494)
. ...+.+....+... . . . .++..+..+.+.+++.+.+++++++ ...|+++
T Consensus 166 ~-----~~~~~~~~~~~~~~----~----------~-~---~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~ 215 (411)
T 1gwi_A 166 R-----LPRLKVLFEKFFST----Q----------T-P---PEEVVATLTELASIMTDTVAAKRAA-------PGDDLTS 215 (411)
T ss_dssp G-----HHHHHHHHHHHHCT----T----------S-C---HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHH
T ss_pred H-----HHHHHHHHHHHhcc----C----------C-C---hHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHH
Confidence 2 23444444333210 0 0 0 1345566677778888888776542 3458999
Q ss_pred HHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHH
Q 011093 273 TLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQT 351 (494)
Q Consensus 273 ~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a 351 (494)
.|++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+ +|++|
T Consensus 216 ~ll~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a 277 (411)
T 1gwi_A 216 ALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------AEWSA 277 (411)
T ss_dssp HHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------SCHHH
T ss_pred HHHHhcccCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------HHHHH
Confidence 99987543 569999999999999999999999999999999999999999999873 36999
Q ss_pred HHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCC-CCCCCCCCCCccCCCCCCCCCccccccC
Q 011093 352 IVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW-DDPYSFKPERFLGSDVDVKGRNFELIPF 430 (494)
Q Consensus 352 ~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~F 430 (494)
||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++| +||++|+|+||.+ ..|+||
T Consensus 278 ~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~lpF 348 (411)
T 1gwi_A 278 VVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------NRHISF 348 (411)
T ss_dssp HHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------SCCCTT
T ss_pred HHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------CCcccC
Confidence 999999999999876789999999999999999999999999999999999 9999999999952 268999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 431 GAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 431 g~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
|.|+|.|+|++||.+|++++++.|+++| ++++..+
T Consensus 349 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 384 (411)
T 1gwi_A 349 GHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVP 384 (411)
T ss_dssp CCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCC
Confidence 9999999999999999999999999999 7998643
No 46
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=6.7e-60 Score=450.20 Aligned_cols=355 Identities=17% Similarity=0.224 Sum_probs=291.2
Q ss_pred ccCCCCCcHHHHHHHHhhCCceEEecC-CeeEEEeCCHHHHHHHHHhcCcccCCCCCccccccccc------CCCCcccc
Q 011093 45 LELGHKPHKSLAELAKVHGPIMSLKFG-QVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQK------DEYGIPWL 117 (494)
Q Consensus 45 ~~~~~~~~~~~~~~~~kyG~v~~~~~g-~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 117 (494)
..+..+|+..+.+++++ ||||+++++ |.++++|+||+++++++.++ .|..++.......... .....++.
T Consensus 25 ~~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (417)
T 3tyw_A 25 RGCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIR 101 (417)
T ss_dssp CSSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGG
T ss_pred cccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhh
Confidence 34567999999999998 999999986 58999999999999999865 4554321111111100 01223566
Q ss_pred cCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCc
Q 011093 118 PVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANS 196 (494)
Q Consensus 118 ~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~ 196 (494)
.+|+.|+++|+.+. +.|++++++.+.+.+.+.++.+++.+.+ .++++|+..++ ..++.++++.+ ||.+++..
T Consensus 102 ~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-- 174 (417)
T 3tyw_A 102 TDAPEHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL-- 174 (417)
T ss_dssp CCHHHHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT--
T ss_pred cCCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH--
Confidence 78999999999998 8999999999999999999999999975 46689999887 57899999987 99887532
Q ss_pred chHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhc
Q 011093 197 DSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLN 276 (494)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~ 276 (494)
..+.+....+.. ..+ ..++..+..+.+.+++.+.+++++++ ...|+++.|++
T Consensus 175 ---~~~~~~~~~~~~---------~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~ 226 (417)
T 3tyw_A 175 ---EFFRDVTRISGS---------RNS---------TAEQVSEALGGLFGLLGGLVAERREE-------PRDDLISKLVT 226 (417)
T ss_dssp ---THHHHHHHHHHS---------SSS---------CTTHHHHHHHHHHHHHHHHHHHHHSS-------CCSSHHHHHHH
T ss_pred ---HHHHHHHHHHhc---------ccC---------CHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHHHH
Confidence 222222222211 001 11345566677777777777766542 44699999998
Q ss_pred cccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHH
Q 011093 277 ISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKE 355 (494)
Q Consensus 277 ~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E 355 (494)
...+ ..++++++..++..+++||+|||+++++|++++|++||++|++|++|++ |++|||+|
T Consensus 227 ~~~~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E 288 (417)
T 3tyw_A 227 DHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------------LMPAAVDE 288 (417)
T ss_dssp HTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------------GHHHHHHH
T ss_pred hcccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------HHHHHHHH
Confidence 7654 4699999999999999999999999999999999999999999999964 69999999
Q ss_pred HhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCC
Q 011093 356 TLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRR 435 (494)
Q Consensus 356 ~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r 435 (494)
+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..|+|||.|+|
T Consensus 289 ~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r 358 (417)
T 3tyw_A 289 LLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD----------NHHVAFGYGVH 358 (417)
T ss_dssp HHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC----------CCCCTTCCSTT
T ss_pred HHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC----------CCCCCCCCCCc
Confidence 99999999986789999999999999999999999999999999999999999999993 25899999999
Q ss_pred CCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 436 ICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 436 ~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
.|+|++||.+|++++++.|+++| ++++..+
T Consensus 359 ~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~ 389 (417)
T 3tyw_A 359 QCVGQHLARLELEVALETLLRRVPTLRLAGE 389 (417)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred cCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence 99999999999999999999999 9999754
No 47
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=1.1e-60 Score=453.93 Aligned_cols=368 Identities=16% Similarity=0.160 Sum_probs=295.0
Q ss_pred cCCCCCCCCCCCCCCcc--cccc----c-CCCCCcHHHHHHHHhhC--CceEEe-cCCeeEEEeCCHHHHHHHHHhcCcc
Q 011093 25 SKGSRKLPPGPTPLPII--GNLL----E-LGHKPHKSLAELAKVHG--PIMSLK-FGQVTTVVISSATMAKQVLQDHDKS 94 (494)
Q Consensus 25 ~~~~~~~pp~p~~~p~l--G~~~----~-~~~~~~~~~~~~~~kyG--~v~~~~-~g~~~~v~v~dp~~~~~i~~~~~~~ 94 (494)
.+.+.+.||+|+..|.. +.+- . +..+++.++.+|+ +|| |||+++ +| ++++|+|++++++|+.+ ...
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~-~~~ 81 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYED-YRH 81 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHC-TTT
T ss_pred ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcC-ccc
Confidence 35678899999999864 4321 1 2356788999995 899 999998 55 68999999999999974 345
Q ss_pred cCCCC-CcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHH
Q 011093 95 LCNRN-VPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQA 173 (494)
Q Consensus 95 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~ 173 (494)
|.+++ ....... .. +.+.++..+|+.|+++|+.+. +.|++..++.+.+.+.++++.+++.+.+ + +++|+..+
T Consensus 82 f~~~~~~~~~~~~-~~-~~~~l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---~-~~~d~~~~ 154 (415)
T 2zwu_A 82 FSSECPFIPREAG-EA-YDFIPTSMDPPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRP---Q-GQCNFTED 154 (415)
T ss_dssp EETTSCSSSHHHH-HH-CCCTTTTCCTTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGG---G-TEEEHHHH
T ss_pred cCCCcccCCCCcc-cc-ccccCccCCCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHH
Confidence 66654 1111111 11 333034567999999999998 8899999999999999999999999864 2 37999876
Q ss_pred H-HHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHH
Q 011093 174 A-FDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFI 252 (494)
Q Consensus 174 ~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (494)
+ ..+++++++.+ ||.+++.. .++.+....+.. . ..|. +..+..+.+.+++.+.+
T Consensus 155 ~~~~~~~~vi~~~-~G~~~~~~-----~~~~~~~~~~~~---~-----~~P~-----------~~~~~~~~~~~~~~~~i 209 (415)
T 2zwu_A 155 YAEPFPIRIFMLL-AGLPEEDI-----PHLKYLTDQMTR---P-----DGSM-----------TFAEAKEALYDYLIPII 209 (415)
T ss_dssp TTTHHHHHHHHHH-HTCCGGGH-----HHHHHHHHHHHS---C-----CSSS-----------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCCHHHH-----HHHHHHHHHHHh---c-----cCHH-----------HHHHHHHHHHHHHHHHH
Confidence 5 78999999998 99887531 344444433321 1 1121 33455667777888888
Q ss_pred HHHHHHHhhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Q 011093 253 DQRLEQRQEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQK 331 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~ 331 (494)
++++++ ...|+++.|++...+ ..++++++..++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 210 ~~r~~~-------~~~dll~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-- 280 (415)
T 2zwu_A 210 EQRRQK-------PGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE-- 280 (415)
T ss_dssp HHHHHS-------CCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG--
T ss_pred HHHHhC-------CCCCHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH--
Confidence 777652 345899999987543 4599999999999999999999999999999999999999999999963
Q ss_pred hCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCC
Q 011093 332 VGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPE 411 (494)
Q Consensus 332 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~ 411 (494)
|++|||+|+||++|+++. + |.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+
T Consensus 281 ----------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~Pe 342 (415)
T 2zwu_A 281 ----------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFS 342 (415)
T ss_dssp ----------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTT
T ss_pred ----------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCC
Confidence 799999999999999995 7 9999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhce-eecCCC
Q 011093 412 RFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSFD-WKLDNE 465 (494)
Q Consensus 412 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~ 465 (494)
||- ..|+|||.|+|.|+|++||.+|++++++.|+++|+ +++.++
T Consensus 343 R~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 387 (415)
T 2zwu_A 343 RQK----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG 387 (415)
T ss_dssp CSS----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT
T ss_pred CCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC
Confidence 961 25899999999999999999999999999999998 998753
No 48
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-59 Score=446.06 Aligned_cols=375 Identities=17% Similarity=0.174 Sum_probs=297.4
Q ss_pred CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHHH
Q 011093 48 GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLR 127 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R 127 (494)
..+|+.++.++++ |||||++. . ++++|+||+++++++.+++ .|.+++... .... .+.+ ++..+|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~~-l~~~~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALPM-MIDMDDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCSS-GGGCCTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--cccc-ccccCchHHHHHH
Confidence 4678999999987 99999764 3 7899999999999997643 566554322 1111 1333 4566799999999
Q ss_pred HHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhcccccccCcchHHHHHHHH
Q 011093 128 KICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVG-QAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSM 206 (494)
Q Consensus 128 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~ 206 (494)
+.+. +.|++..++.+.+.+.+.++.+++.+.+ ++++|+. ++...+++++++.+ ||.+.+.. .++.+..
T Consensus 88 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-----~~~~~~~ 156 (398)
T 2xkr_A 88 KLVN-AGFTRKRVKDKEASIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR-----DMFLRWS 156 (398)
T ss_dssp HHHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-----HHHHHHH
T ss_pred HHhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH-----HHHHHHH
Confidence 9998 8999999999999999999999998853 3479998 55568999999998 99886431 3444444
Q ss_pred HHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-CCCCH
Q 011093 207 WGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-EEIDR 285 (494)
Q Consensus 207 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls~ 285 (494)
..+..... |.+ .+...++..+....+.+++.+.+++++++ ...|+++.|++...+ ..+++
T Consensus 157 ~~~~~~~~--------~~~----~p~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~~~~ls~ 217 (398)
T 2xkr_A 157 DDLVTFLS--------SHV----SQEDFQITMDAFAAYNDFTRATIAARRAD-------PTDDLVSVLVSSEVDGERLSD 217 (398)
T ss_dssp HHHHHHHT--------SCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBTTBCCCH
T ss_pred HHHHhccC--------ccc----chhhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccCCCCCH
Confidence 44433221 110 11223445566677778888888776542 346899999987543 45999
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCC
Q 011093 286 NDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPL 365 (494)
Q Consensus 286 ~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~ 365 (494)
+++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+||++|+++.
T Consensus 218 ~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~ 279 (398)
T 2xkr_A 218 DELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVKN 279 (398)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBCE
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcccccC
Confidence 99999999999999999999999999999999999999999975 799999999999999997
Q ss_pred cCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHH
Q 011093 366 LLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIR 445 (494)
Q Consensus 366 ~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~ 445 (494)
++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.. .|+|||.|+|.|+|++||.+
T Consensus 280 -~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~ 348 (398)
T 2xkr_A 280 -MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----------SHLAFGFGTHFCLGNQLARL 348 (398)
T ss_dssp -EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC----------CCCTTCCSTTCCTTHHHHHH
T ss_pred -cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC----------CCCcCCCCCcCCcCHHHHHH
Confidence 7899999999999999999999999999999999999999999999842 48999999999999999999
Q ss_pred HHHHHHHHHhhhc-eeecCCCCCCCCCC-ccccccccccCCCCeeEeeee
Q 011093 446 MLYLMLGSLIKSF-DWKLDNEVTSGNID-MEEKFGITLQKAQPLRVVPVA 493 (494)
Q Consensus 446 ~~~~~l~~ll~~f-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (494)
|++++++.|+++| ++++.++ ...+ .............++.++|++
T Consensus 349 e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~lpv~~~p~~ 395 (398)
T 2xkr_A 349 ELSLMTERVLRRLPDLRLVAD---DSVLPLRPANFVSGLESMPVVFTPSP 395 (398)
T ss_dssp HHHHHHHHHHHHSTTCEESCT---TCCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCceECCC---cceecccCcccccCccceeEEecCCC
Confidence 9999999999999 5998643 1111 022233444555666666654
No 49
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=9.9e-62 Score=472.88 Aligned_cols=403 Identities=12% Similarity=0.149 Sum_probs=295.1
Q ss_pred CCCCCCCCCCCCCCcccccccC-----CC-CCcHHHHHHHHhhCC-ceEEecCCe-------eEEEeCCHHHHHHHHHhc
Q 011093 26 KGSRKLPPGPTPLPIIGNLLEL-----GH-KPHKSLAELAKVHGP-IMSLKFGQV-------TTVVISSATMAKQVLQDH 91 (494)
Q Consensus 26 ~~~~~~pp~p~~~p~lG~~~~~-----~~-~~~~~~~~~~~kyG~-v~~~~~g~~-------~~v~v~dp~~~~~i~~~~ 91 (494)
..|.+.||||+++|++|++.++ .. +++.++.++++|||+ ||++++++. ..+++.+.+..+.++...
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 5678889999999999999875 35 788999999999999 999998643 445556665554544311
Q ss_pred ----CcccCCCCCcccccccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCc
Q 011093 92 ----DKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEP 167 (494)
Q Consensus 92 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 167 (494)
...+... ...............++..+|+.|+++|+.+. +.|++ .++.+.+.+++.++.+++.|.+...++++
T Consensus 85 ~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~~~ 161 (473)
T 3dan_A 85 KVEKKDLFTGT-YMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKN-SSNRVIPQFETTYTELFEGLEAELAKNGK 161 (473)
T ss_dssp TEECSSCTTSS-SCCCGGGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ceecccccccc-ccCCccccCCCcceeeeCCCcHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 1111111 11111111111123345678999999999998 88988 48999999999999999999764444578
Q ss_pred eehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHH----------
Q 011093 168 IDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRL---------- 237 (494)
Q Consensus 168 vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~---------- 237 (494)
+|+.+++..+++++++..+||.++...+ ....+......+... ...|.+... .+......
T Consensus 162 vdl~~~~~~~~~~~i~~~~~G~~~~~~~--~~~~~~~~~~~~~~~-------~~~p~~~~~-lp~~~~~~~~~~~~~~~~ 231 (473)
T 3dan_A 162 AAFNDVGEQAAFRFLGRAYFNSNPEETK--LGTSAPTLISSWVLF-------NLAPTLDLG-LPWFLQEPLLHTFRLPAF 231 (473)
T ss_dssp EECHHHHHHHHHHHHHHHHHSCCGGGST--TTTCHHHHHHHHHHH-------HHGGGCCCS-CCHHHHHHHHSSSCCCGG
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCchh--hhhhHHHHHHHHHHH-------hccchhhhc-chHHHHHHHhhhccchHh
Confidence 9999999999999999999999987622 112222222222111 112222100 11100000
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHH-HhcCCchHHHHHHHHHHH
Q 011093 238 --TRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLF-AAGTETTSSTLEWAVTEL 314 (494)
Q Consensus 238 --~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~-~ag~~tt~~~l~~~l~~L 314 (494)
.+..+...+. -.++++.+++..++.+++++|+..+++.++ ++|++||+++++|++++|
T Consensus 232 ~~~~~~~~~~~~-------------------~~~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L 292 (473)
T 3dan_A 232 LIKSTYNKLYDY-------------------FQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWI 292 (473)
T ss_dssp GTHHHHHHHHHH-------------------HHHHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hhhhchhhhHHH-------------------HHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 1111111111 124555566554446799999998886666 888888999999999999
Q ss_pred Hh-CHHHHHHHHHHHHHhhCC--CCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceee----ccEEeCCCCE
Q 011093 315 LN-NSEALSKARLELEQKVGK--GNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEI----TGFIIPKGAQ 387 (494)
Q Consensus 315 ~~-~p~~~~~l~~Ei~~~~~~--~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~----~g~~ip~g~~ 387 (494)
++ ||++|++|++|++++++. +..++.+++++||||+|||+|+||++|+++... |.+.+|+++ +||.||||+.
T Consensus 293 ~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~~ 371 (473)
T 3dan_A 293 GLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEM 371 (473)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCE
T ss_pred HhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCCE
Confidence 99 799999999999999764 367899999999999999999999999999865 669999999 9999999999
Q ss_pred EEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCcccccc---------CCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 011093 388 VLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIP---------FGAGRRICPGLPLAIRMLYLMLGSLIKSF 458 (494)
Q Consensus 388 v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f 458 (494)
|.++.+++||||++|+||++|||+||++... ....|+| ||+|+|.|+|++||.+|++++++.|+++|
T Consensus 372 v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f 447 (473)
T 3dan_A 372 LFGYQPFATKDPKVFDRPEEYVPDRFVGDGE----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRY 447 (473)
T ss_dssp EEEEHHHHTTCTTTSSSTTSCCTTTTSGGGG----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred EEechHHhhCCchhcCCcccCCccccCCCcc----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999997521 1223444 55555999999999999999999999999
Q ss_pred eeecCCC
Q 011093 459 DWKLDNE 465 (494)
Q Consensus 459 ~~~~~~~ 465 (494)
++...++
T Consensus 448 ~~~~~~~ 454 (473)
T 3dan_A 448 DSFEIEL 454 (473)
T ss_dssp EEEEEEE
T ss_pred CeEEccC
Confidence 9766544
No 50
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=1.2e-59 Score=446.82 Aligned_cols=369 Identities=19% Similarity=0.235 Sum_probs=290.0
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCCccccc
Q 011093 27 GSRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVG 105 (494)
Q Consensus 27 ~~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~ 105 (494)
+.....+||.. |+- ..+..+|+.++.+++ +||||+++++ |+.++++|+||+++++++.+. .|..++......
T Consensus 4 ~~~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~ 76 (413)
T 2z36_A 4 NVADELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFP 76 (413)
T ss_dssp ------CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCC
T ss_pred cHHHHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcc
Confidence 34445556652 431 335678999999997 8899999997 889999999999999999863 455543221111
Q ss_pred ------cccc---CCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-H
Q 011093 106 ------SIQK---DEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-F 175 (494)
Q Consensus 106 ------~~~~---~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~ 175 (494)
.... .+.+.++..+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+ ..++++|+...+ .
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~~~d~~~~~~~ 153 (413)
T 2z36_A 77 LFTLDAATLQQLRSQPPLMLGMDGAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLA--TDQRPVDLVQALSL 153 (413)
T ss_dssp CSSCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT--CSCSSEEHHHHTTT
T ss_pred ccccccccccccccccccccccCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCccHHHHHhh
Confidence 1100 1344245568999999999998 8899999999999999999999999863 126789988655 4
Q ss_pred HHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 176 DTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQR 255 (494)
Q Consensus 176 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 255 (494)
.+++++++. +||.+.+.. ..+...... ... . . .+ ++..+....+.+++.+.++++
T Consensus 154 ~~~~~vi~~-~~G~~~~~~-----~~~~~~~~~----~~~-----~------~-~~---~~~~~~~~~~~~~~~~~i~~r 208 (413)
T 2z36_A 154 PVPSLVICE-LLGVPYTDH-----DFFQSRTTM----MVS-----R------T-SM---EDRRRAFAELRAYIDDLITRK 208 (413)
T ss_dssp HHHHHHHHH-HHTCCGGGH-----HHHHHHHHH----TTC-----S------S-CH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHH-HhCCCHHHH-----HHHHHHHHH----Hhc-----c------c-Cc---HHHHHHHHHHHHHHHHHHHHH
Confidence 689999998 599876421 233322221 110 0 0 01 344556667777777777766
Q ss_pred HHHHhhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCC
Q 011093 256 LEQRQEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGK 334 (494)
Q Consensus 256 ~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~ 334 (494)
+++ ...|+++.|++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 209 ~~~-------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----- 276 (413)
T 2z36_A 209 ESE-------PGDDLFSRQIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG----- 276 (413)
T ss_dssp HSS-------CCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----
T ss_pred HhC-------CCCCHHHHHHHhhcCCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH-----
Confidence 432 345899999986433 4699999999999999999999999999999999999999999999963
Q ss_pred CCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCcc
Q 011093 335 GNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFL 414 (494)
Q Consensus 335 ~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l 414 (494)
|++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 277 -------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~ 343 (413)
T 2z36_A 277 -------------RTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA 343 (413)
T ss_dssp -------------GHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC
T ss_pred -------------HHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC
Confidence 6999999999999999966789999999999999999999999999999999999999999999983
Q ss_pred CCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 415 GSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 415 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
..++|||.|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 344 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 385 (413)
T 2z36_A 344 ----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVP 385 (413)
T ss_dssp ----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred ----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 1589999999999999999999999999999999 5888754
No 51
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=3.1e-59 Score=441.95 Aligned_cols=347 Identities=18% Similarity=0.252 Sum_probs=283.8
Q ss_pred CCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCCccc-ccccccCCCCc-ccccCC---
Q 011093 47 LGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNVPES-VGSIQKDEYGI-PWLPVS--- 120 (494)
Q Consensus 47 ~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~--- 120 (494)
+..+|+.++.++ ++|||||++++ ++.++++|+||+++++|+.++ .|.+++.... ..... .+.+. ++..+|
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~ 99 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADAE 99 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCHH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCCC
Confidence 456899999999 89999999997 889999999999999999864 3554433211 11111 12231 455678
Q ss_pred ---hhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCc
Q 011093 121 ---TKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANS 196 (494)
Q Consensus 121 ---~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~ 196 (494)
+.|+++|+.+. +.|+++.++.+.+.+.+.++.+++.+.+ +++++|+...+ ..+++++++. +||.+...
T Consensus 100 ~~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--- 171 (404)
T 2xbk_A 100 SGRRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQR--- 171 (404)
T ss_dssp HHHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG---
T ss_pred CCCchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH---
Confidence 99999999998 8899999999999999999999999974 46689998665 5799999997 79987642
Q ss_pred chHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhc
Q 011093 197 DSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLN 276 (494)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~ 276 (494)
...+.+....+.. . . . .+ +..+..+.+.+++.+.++++++. ...|+++.| +
T Consensus 172 --~~~~~~~~~~~~~---~---~--~-------~p----~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~l-~ 222 (404)
T 2xbk_A 172 --RAELTTLLAGIAK---L---D--D-------RE----GAVRAQDDLFGYVAGLVEHKRAE-------PGPDIISRL-N 222 (404)
T ss_dssp --HHHHHHHHHHHTB---S---S--C-------HH----HHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH-H
T ss_pred --HHHHHHHHHHHHh---c---c--C-------cH----HHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHh-h
Confidence 1334333332211 0 0 0 11 44556667777888888776543 235899988 2
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHH
Q 011093 277 ISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKET 356 (494)
Q Consensus 277 ~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~ 356 (494)
+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+
T Consensus 223 --~-~~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~ 281 (404)
T 2xbk_A 223 --D-GELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------------VMARAVEEV 281 (404)
T ss_dssp --S-SSCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH------------------HHHHHHHHH
T ss_pred --c-CCCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHH
Confidence 2 2799999999999999999999999999999999999999999999974 699999999
Q ss_pred hhcCCCCC-CcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCC
Q 011093 357 LRLHPPVP-LLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRR 435 (494)
Q Consensus 357 lRl~~~~~-~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r 435 (494)
||++|+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..|+|||.|+|
T Consensus 282 lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r 351 (404)
T 2xbk_A 282 LRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP----------NPHLTFGHGIW 351 (404)
T ss_dssp HHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS----------CCCCTTEETTE
T ss_pred HHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC----------CCCCCCCCCCc
Confidence 99999999 45789999999999999999999999999999999999999999999983 25899999999
Q ss_pred CCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 436 ICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 436 ~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
.|+|++||.+|++++++.|+++| ++++.++
T Consensus 352 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 382 (404)
T 2xbk_A 352 HCIGAPLARLELRTMFTKLFTRLPELRPELP 382 (404)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCCcceecCC
Confidence 99999999999999999999999 7998754
No 52
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=2.1e-60 Score=455.70 Aligned_cols=364 Identities=19% Similarity=0.240 Sum_probs=279.5
Q ss_pred CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHHH
Q 011093 48 GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLR 127 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R 127 (494)
..+|+.++.++ ++||||+++..++ +++|++|+++++|+.+... |..++......... +.+.++..+|+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~--~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVM--RGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSC--C-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-cccccccccccccc--CCCccccCCcHHHHHHH
Confidence 35788889887 6899999987766 8999999999999986643 66554433322221 33445677899999999
Q ss_pred HHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhcccccccCcchHHHHHHHH
Q 011093 128 KICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVG-QAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSM 206 (494)
Q Consensus 128 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~ 206 (494)
+.+. +.|++..++.+.+.+.+.++++++.|. .++++|+. ++...+++++++. +||.+.... ..+.+..
T Consensus 126 r~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-----~~~~~~~ 194 (441)
T 3nc3_A 126 RIVV-RSFIGDALDHLSPLIKQNAENLLAPYL----ERGKSDLVNDFGKTFAVCVTMD-MLGLDKRDH-----EKISEWH 194 (441)
T ss_dssp HHHH-HHHHHTHHHHHHHHHHHHHHHHHTTTT----TTTEEECCCCCHHHHHHHHHHH-HTTCCGGGH-----HHHHHHH
T ss_pred HHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHH----hcCCCcHHHHHHHHHHHHHHHH-HcCCCHHHH-----HHHHHHH
Confidence 9998 899999999999999999999998875 34578974 4556699999998 689775332 3444444
Q ss_pred HHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-CCCCH
Q 011093 207 WGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-EEIDR 285 (494)
Q Consensus 207 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls~ 285 (494)
..+......... .........+..+.+.+++.+.+++++++ ...|+++.|++...+ ..+++
T Consensus 195 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~Dll~~Ll~~~~~~~~ls~ 256 (441)
T 3nc3_A 195 SGVADFITSISQ-----------SPEARAHSLWCSEQLSQYLMPVIKERRVN-------PGSDLISILCTSEYEGMALSD 256 (441)
T ss_dssp HHHHHHHHCSCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHCC------CCCH
T ss_pred HHHHHhcccccC-----------ChHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccCCCCCH
Confidence 444433221100 11123445566667777777777666431 456999999987643 56999
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCC
Q 011093 286 NDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPL 365 (494)
Q Consensus 286 ~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~ 365 (494)
+|+.+++..+++||+|||+++++|++++|++||++|+++++|+ +|+++||+|+||++|+++.
T Consensus 257 ~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~ 318 (441)
T 3nc3_A 257 KDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPRAIAETLRYKPPVQL 318 (441)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCE
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHhhhcCCcccC
Confidence 9999999999999999999999999999999999999999985 5899999999999999997
Q ss_pred cCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHH
Q 011093 366 LLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIR 445 (494)
Q Consensus 366 ~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~ 445 (494)
++|.+++|++++||.||+|+.|.++.+++||||++|+||++|||+||+............|+|||.|+|.|+|++||.+
T Consensus 319 -~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~ 397 (441)
T 3nc3_A 319 -IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKN 397 (441)
T ss_dssp -EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHH
T ss_pred -ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHH
Confidence 6899999999999999999999999999999999999999999999976543222224579999999999999999999
Q ss_pred HHHHHHHHHhhhc-eeecCCC
Q 011093 446 MLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 446 ~~~~~l~~ll~~f-~~~~~~~ 465 (494)
|++++++.|+++| ++++.++
T Consensus 398 e~~~~l~~ll~~f~~~~l~~~ 418 (441)
T 3nc3_A 398 EIEIVANIVLDKMRNIRLEED 418 (441)
T ss_dssp HHHHHHHHHHHHSTTCEECTT
T ss_pred HHHHHHHHHHHhCcccEECCC
Confidence 9999999999999 9999765
No 53
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=1.4e-59 Score=445.98 Aligned_cols=352 Identities=21% Similarity=0.274 Sum_probs=287.8
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCc--c----ccc---cc-cc----CC
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVP--E----SVG---SI-QK----DE 111 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~--~----~~~---~~-~~----~~ 111 (494)
.+..+|+.++.++ ++|||||++++++.++++|+||+++++++.++ .|.+++.. . ... .+ .. .+
T Consensus 11 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (404)
T 1z8o_A 11 SFHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA 87 (404)
T ss_dssp GGTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS
T ss_pred ccccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcc
Confidence 3456899999999 99999999999999999999999999999865 46555432 1 110 11 00 13
Q ss_pred CCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccc
Q 011093 112 YGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVD 190 (494)
Q Consensus 112 ~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~ 190 (494)
.+ ++..+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+. .++++|+...+ ..+++++++. +||.+
T Consensus 88 ~~-l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~ 160 (404)
T 1z8o_A 88 TN-MGTSDPPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVG----DSGVVDIVDRFAHPLPIKVICE-LLGVD 160 (404)
T ss_dssp SS-GGGCCTTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSC----SSSEEEHHHHTTTHHHHHHHHH-HTTCC
T ss_pred cc-cccCCCcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhh----hcCCcchHHHHhHHHHHHHHHH-HhCCC
Confidence 34 45568999999999998 899999999999999999999998875 25689998655 6899999997 59987
Q ss_pred ccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhH
Q 011093 191 LADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDM 270 (494)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~ 270 (494)
.+.. ..+.+....+.. . ..| . .++..+..+.+.+++.+.+++++++ ...|+
T Consensus 161 ~~~~-----~~~~~~~~~~~~--~------~~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dl 211 (404)
T 1z8o_A 161 EKYR-----GEFGRWSSEILV--M------DPE--------R-AEQRGQAAREVVNFILDLVERRRTE-------PGDDL 211 (404)
T ss_dssp GGGT-----TTHHHHHHHHHC--C------CGG--------G-HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSH
T ss_pred HHHH-----HHHHHHHHHHhc--c------CCh--------h-HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCH
Confidence 6532 223333333221 0 011 1 2445566677778888888776542 34589
Q ss_pred HHHHhcc-ccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChh
Q 011093 271 LDTLLNI-SES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPY 348 (494)
Q Consensus 271 ~~~ll~~-~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~ 348 (494)
++.|++. .++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |
T Consensus 212 l~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~ 273 (404)
T 1z8o_A 212 LSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------------------A 273 (404)
T ss_dssp HHHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------G
T ss_pred HHHHHhhhcccCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------h
Confidence 9999986 433 4599999999999999999999999999999999999999999999953 6
Q ss_pred HHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccc
Q 011093 349 LQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELI 428 (494)
Q Consensus 349 l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~ 428 (494)
++|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..|+
T Consensus 274 l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~----------~~~~ 342 (404)
T 1z8o_A 274 LPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT----------RGHL 342 (404)
T ss_dssp HHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCC
T ss_pred HHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC----------CCcc
Confidence 9999999999999999 5789999999999999999999999999999999999999999999983 1589
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 429 PFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 429 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
|||.|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 343 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 380 (404)
T 1z8o_A 343 SFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 380 (404)
T ss_dssp TTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCC
Confidence 999999999999999999999999999999 5898754
No 54
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=5e-60 Score=448.77 Aligned_cols=375 Identities=18% Similarity=0.192 Sum_probs=291.6
Q ss_pred CCCCcHHHHHHHHhhCCceEEecCC--eeEEEeCCHHHHHHHHHhcCcccCCCCCccc----ccccccC-CCCcccccCC
Q 011093 48 GHKPHKSLAELAKVHGPIMSLKFGQ--VTTVVISSATMAKQVLQDHDKSLCNRNVPES----VGSIQKD-EYGIPWLPVS 120 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~~~~~g~--~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~ 120 (494)
+.+++.++.+++ +||||+++.+++ .+.++|++|+++++|+.+. .|.+.+.... ....... +.+ ++..+|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGS-LAFADQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTC-STTCCT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccc-cccCCc
Confidence 456779999997 899999999764 7899999999999999753 4554432211 1111100 223 456789
Q ss_pred hhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHHHHHHHhcccccccCcchH
Q 011093 121 TKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAF-DTVVNLLSNSIFSVDLADANSDSA 199 (494)
Q Consensus 121 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~ 199 (494)
+.|+++|+.+. +.|+++.++.+.+.+.+.++++++.|.+ +++++|+...+. .+++++++. +||.+++. .
T Consensus 102 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-----~ 171 (411)
T 2dkk_A 102 PDHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAAD-----R 171 (411)
T ss_dssp THHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH-----H
T ss_pred hHHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-----H
Confidence 99999999998 8899999999999999999999999975 356899987775 699999988 59987642 1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcccc
Q 011093 200 REFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISE 279 (494)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~ 279 (494)
..+.+.... .. ...+ ..++..+....+.+++.+.+++++++ ...|+++.|++..+
T Consensus 172 ~~~~~~~~~----~~-----~~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 226 (411)
T 2dkk_A 172 ERVHSWTRQ----II-----STSG---------GAEAAERAKRGLYGWITETVRARAGS-------EGGDVYSMLGAAVG 226 (411)
T ss_dssp HHHHHHHGG----GC-----SSCS---------CSHHHHHHHHHHHHHHHHHHHTTTTC-------CSSCHHHHHHHHHH
T ss_pred HHHHHHHHH----HH-----hccc---------hHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhcC
Confidence 223222211 11 0111 11344556666777777776655321 34589999998722
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhc
Q 011093 280 SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRL 359 (494)
Q Consensus 280 ~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl 359 (494)
+..++++|+.+++..+++|| |||+++++|++++|++||++|++|++|++ |+++||+|+||+
T Consensus 227 ~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl 287 (411)
T 2dkk_A 227 RGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG------------------ARGTALDELLRW 287 (411)
T ss_dssp TTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT------------------CCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHhh
Confidence 25699999999999999999 99999999999999999999999999963 699999999999
Q ss_pred CCCCCCc-CccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCC
Q 011093 360 HPPVPLL-LPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICP 438 (494)
Q Consensus 360 ~~~~~~~-~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 438 (494)
+|+++.. ++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|||+||. ..|+|||.|+|.|+
T Consensus 288 ~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----------~~~l~FG~G~r~C~ 357 (411)
T 2dkk_A 288 ISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----------NPHLAYGNGHHFCT 357 (411)
T ss_dssp SCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----------CCCCTTCCSTTSCT
T ss_pred CCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----------CCCCCCCCCCCCCc
Confidence 9999966 789999999999999999999999999999999999999999999995 25899999999999
Q ss_pred ChHHHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 439 GLPLAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 439 G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
|++||.+|++++++.|+++| ++++.++. .++.+.....+......++.+++|
T Consensus 358 G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~~~~~~~~lpv~~~~R 410 (411)
T 2dkk_A 358 GAVLARMQTELLVDTLLERLPGLRLAVPA--EQVAWRRKTMIRGPRTLPCTWHHH 410 (411)
T ss_dssp THHHHHHHHHHHHHHHHHHSTTCEESSCG--GGCCBCCSSSBCCBSCCEEECCCC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCcEECCCc--cccccccCcccCCcceeEEEeccC
Confidence 99999999999999999999 89987641 223333332333334444544443
No 55
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=9e-60 Score=449.27 Aligned_cols=382 Identities=21% Similarity=0.292 Sum_probs=298.9
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCC-----cc---cccccccC-CCCccc
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNV-----PE---SVGSIQKD-EYGIPW 116 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-----~~---~~~~~~~~-~~~~~~ 116 (494)
.+..+++.++.++ ++|||||+ + ++.++++|+||+++++|+.+++ |.+++. .. ....+... +.+ ++
T Consensus 23 ~~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 96 (419)
T 1q5d_A 23 GYAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYG-LF 96 (419)
T ss_dssp TTTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHS-TT
T ss_pred hhhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccc-cc
Confidence 3467899999999 78999999 6 6778999999999999998654 666541 11 11111100 222 35
Q ss_pred ccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhcccccccC
Q 011093 117 LPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQA-AFDTVVNLLSNSIFSVDLADAN 195 (494)
Q Consensus 117 ~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~~ 195 (494)
..+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+ ++++|+... ...+++++++.+ ||.+.+..
T Consensus 97 ~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~- 169 (419)
T 1q5d_A 97 GLPPEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPAECD- 169 (419)
T ss_dssp TSCHHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCGGGH-
T ss_pred cCCchHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHH-
Confidence 567999999999998 8999999999999999999999999863 247998764 589999999998 99876432
Q ss_pred cchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCch-hHHHHH
Q 011093 196 SDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSK-DMLDTL 274 (494)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-d~~~~l 274 (494)
..+.+....+...... ..+|+... ..++..+....+.+++.+.+++++++ ... |+++.|
T Consensus 170 ----~~~~~~~~~~~~~~~~----~~~P~~~~-----~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~~dll~~l 229 (419)
T 1q5d_A 170 ----EKFRRFGSATARALGV----GLVPRVDE-----ETKTLVASVTEGLALLHGVLDERRRN-------PLENDVLTML 229 (419)
T ss_dssp ----HHHHHHHHHHHHHTTT----TTSSCCCS-----CHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSCHHHHH
T ss_pred ----HHHHHHHHHHHHhccc----ccccCChH-----HHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCCHHHHH
Confidence 3444444444332211 12333211 12345566777788888888777542 334 899999
Q ss_pred hccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHH
Q 011093 275 LNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIV 353 (494)
Q Consensus 275 l~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i 353 (494)
++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+ .|++|||
T Consensus 230 l~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i 291 (419)
T 1q5d_A 230 LQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------GLMRNAL 291 (419)
T ss_dssp HHHHHSSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHH
T ss_pred HhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHH
Confidence 987543 469999999999999999999999999999999999999999999994 3799999
Q ss_pred HHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCC
Q 011093 354 KETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAG 433 (494)
Q Consensus 354 ~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G 433 (494)
+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+|+ + ..++|||.|
T Consensus 292 ~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~--------~~~l~FG~G 361 (419)
T 1q5d_A 292 DEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD--T--------SASLAYGRG 361 (419)
T ss_dssp HHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC--C--------TTCCTTCCG
T ss_pred HHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC--C--------CCCCCCCCC
Confidence 999999999996678999999999999999999999999999999999999999999994 1 258999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093 434 RRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA 493 (494)
Q Consensus 434 ~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (494)
+|.|+|++||.+|++++++.|+++| ++++.++. .+............++.+++|+
T Consensus 362 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~~~~~~~~~~~l~v~~~~r~ 417 (419)
T 1q5d_A 362 PHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP-----VFGYHPAFRNIESLNVILKPSK 417 (419)
T ss_dssp GGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC-----EECCCSSBCCEEECEEESSCC-
T ss_pred CCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc-----ccccccccCCCceeEEEEecCC
Confidence 9999999999999999999999999 89987641 2222223333444555555554
No 56
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=5.6e-60 Score=449.26 Aligned_cols=374 Identities=17% Similarity=0.195 Sum_probs=292.1
Q ss_pred CCCCcHHHHHHHHhhCCce-----EEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-ccc--cc-c-cCCCCcccc
Q 011093 48 GHKPHKSLAELAKVHGPIM-----SLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-SVG--SI-Q-KDEYGIPWL 117 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~-----~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~ 117 (494)
..+|+.++.+++ +||||| ++++ .++++|+||+++++|+.++ ..|.+++... ... .+ . ..+.++ +.
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l-~~ 98 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPM-VM 98 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCG-GG
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccccccccccccc-cc
Confidence 368899999985 799999 8876 5789999999999999865 5566654332 111 11 1 113344 45
Q ss_pred cCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhcccccccCc
Q 011093 118 PVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVG-QAAFDTVVNLLSNSIFSVDLADANS 196 (494)
Q Consensus 118 ~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~-~~~~~~~~~~~~~~~fG~~~~~~~~ 196 (494)
.+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+ . +++|+. +++..+++++++. +||.+++. .
T Consensus 99 ~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~-~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--~ 170 (414)
T 2uuq_A 99 QDPPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRA---N-GGGDIVTELFKPLPSMVVAH-YLGVPEED--W 170 (414)
T ss_dssp CCTTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHH---T-TEEEHHHHTTTHHHHHHHHH-HTTCCGGG--H
T ss_pred CCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHHHHHhHHHHHHH-HhCCCHHH--H
Confidence 68999999999998 8999999999999999999999999975 2 469996 5667999999998 69988752 1
Q ss_pred chHHHHHHHHHHHHHHhcCCCccccc-cccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHh
Q 011093 197 DSAREFKDSMWGLMVEAGRPNLSDFF-PMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLL 275 (494)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll 275 (494)
..+.+....+.... ++ |.. .+..+....+.+++.+.+++++++ ...|+++.|+
T Consensus 171 ---~~~~~~~~~~~~~~-------~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll 224 (414)
T 2uuq_A 171 ---TQFDGWTQAIVAAN-------AVDGAT---------TGALDAVGSMMAYFTGLIERRRTE-------PADDAISHLV 224 (414)
T ss_dssp ---HHHHHHHHHHHHHH-------HC--------------CCHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHH
T ss_pred ---HHHHHHHHHHHhhc-------ccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHH
Confidence 33333333332210 11 211 122344556667777777665432 3458999999
Q ss_pred cccc---CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHH
Q 011093 276 NISE---SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTI 352 (494)
Q Consensus 276 ~~~~---~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~ 352 (494)
+... +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+ +|++||
T Consensus 225 ~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~ 286 (414)
T 2uuq_A 225 AAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGIPDA 286 (414)
T ss_dssp HTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHH
T ss_pred hcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHH
Confidence 8753 2458999999999999999999999999999999999999999999996 389999
Q ss_pred HHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCC-CCCCCCCCCCccCCCCCCCCCccccccCC
Q 011093 353 VKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW-DDPYSFKPERFLGSDVDVKGRNFELIPFG 431 (494)
Q Consensus 353 i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg 431 (494)
|+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++| +||++|+|+||.. .++|||
T Consensus 287 i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~~----------~~~~FG 355 (414)
T 2uuq_A 287 VEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPR----------NILTFS 355 (414)
T ss_dssp HHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCCC----------SCCTTC
T ss_pred HHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCCC----------CCcCCC
Confidence 999999999999 5789999999999999999999999999999999999 9999999999841 589999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeeee
Q 011093 432 AGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPVA 493 (494)
Q Consensus 432 ~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (494)
.|+|.|+|++||.+|++++++.|+++| ++++.++ .+.+.....+......++.++||+
T Consensus 356 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~----~~~~~~~~~~~~~~~lpv~~~~r~ 414 (414)
T 2uuq_A 356 HGAHHCLGAAAARMQCRVALTELLARCPDFEVAES----RIVWSGGSYVRRPLSVPFRVTSSR 414 (414)
T ss_dssp SSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG----GCEECCCSSBCCEEECEEEEC---
T ss_pred CCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC----CccccccccccCcceeEEEecCCC
Confidence 999999999999999999999999999 6998732 333433333344455566666653
No 57
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=1.9e-59 Score=448.63 Aligned_cols=371 Identities=17% Similarity=0.214 Sum_probs=291.1
Q ss_pred CCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEe--------cCCeeEEEeCCHHHHHHHHHhcCcccCCCC
Q 011093 28 SRKLPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLK--------FGQVTTVVISSATMAKQVLQDHDKSLCNRN 99 (494)
Q Consensus 28 ~~~~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~--------~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~ 99 (494)
.-..|+.|..+++++.......+|+.++.++ ++||||+++. +|+.++++|+++++++++++++ ..|..++
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~ 93 (433)
T 3ivy_A 16 TVPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYE 93 (433)
T ss_dssp ----CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTT
T ss_pred ccCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCc
Confidence 3355777777777766554456799999999 7899999998 4557999999999999999754 5566554
Q ss_pred Cccccc--------ccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehh
Q 011093 100 VPESVG--------SIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVG 171 (494)
Q Consensus 100 ~~~~~~--------~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~ 171 (494)
...... .... ....++..+|+.|+++|+.++ +.|++..++.+.+.+.+.++.+++.+.+ ++++|+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~ 167 (433)
T 3ivy_A 94 NGVIPRFKNDIAREDIEV-QRFVMLNMDAPHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAA----AGSGDFV 167 (433)
T ss_dssp TCSCCCCCTTCCHHHHHG-GGGSGGGCCTTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHH----HCEEEHH
T ss_pred cccccccccccccccccc-ccCCccccChHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh----CCCeeHH
Confidence 332221 1111 122346778999999999998 8999999999999999999999999874 3579998
Q ss_pred HHH-HHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHH
Q 011093 172 QAA-FDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDR 250 (494)
Q Consensus 172 ~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (494)
..+ ..+++++++.+ ||.+... ...+.+.... . +....|.... .+..+..+.+.+++.+
T Consensus 168 ~~~~~~~~~~vi~~l-~G~~~~~-----~~~~~~~~~~----~----~~~~~p~~~~-------~~~~~~~~~~~~~~~~ 226 (433)
T 3ivy_A 168 EQVSCELPLQAIAGL-LGVPQED-----RGKLFHWSNE----M----TGNEDPEYAH-------IDPKASSAELIGYAMK 226 (433)
T ss_dssp HHTTSHHHHHHHHHH-HTCCHHH-----HHHHHHHHTT----C----SCCCCGGGTT-------CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-cCCCHHH-----HHHHHHHHHH----H----hccCCchhhh-------HHHHHHHHHHHHHHHH
Confidence 887 99999999995 8864321 1222222111 1 1112222111 1345566677778888
Q ss_pred HHHHHHHHHhhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 011093 251 FIDQRLEQRQEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELE 329 (494)
Q Consensus 251 ~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~ 329 (494)
++++++++ ...|+++.|++...+ ..++++|+.+++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 227 ~i~~r~~~-------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~ 299 (433)
T 3ivy_A 227 MAEEKAKN-------PADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP 299 (433)
T ss_dssp HHHHC--------------CHHHHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHhcC-------CCCcHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc
Confidence 87776543 345899999987554 5699999999999999999999999999999999999999999999974
Q ss_pred HhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCC
Q 011093 330 QKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFK 409 (494)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~ 409 (494)
++||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+
T Consensus 300 --------------------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~ 358 (433)
T 3ivy_A 300 --------------------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFN 358 (433)
T ss_dssp --------------------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCC
T ss_pred --------------------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccC
Confidence 6899999999999997 6899999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCccccccCC-CCCCCCCChHHHHHHHHHHHHHHhhhce-eecCCC
Q 011093 410 PERFLGSDVDVKGRNFELIPFG-AGRRICPGLPLAIRMLYLMLGSLIKSFD-WKLDNE 465 (494)
Q Consensus 410 p~R~l~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~ 465 (494)
|+||.. .|+||| .|+|.|+|++||.+|++++++.|+++|+ +++.++
T Consensus 359 p~R~~~----------~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 406 (433)
T 3ivy_A 359 ILRNPN----------PHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISA 406 (433)
T ss_dssp TTCCSC----------CCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCC
Confidence 999931 589999 9999999999999999999999999999 998754
No 58
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=1.1e-59 Score=448.90 Aligned_cols=355 Identities=19% Similarity=0.197 Sum_probs=281.9
Q ss_pred CCCCcHHHHHHHHhhCCceEEecC--CeeEEEeCCHHHHHHHHHhcCcccCCCCCc---------ccccc----c-ccCC
Q 011093 48 GHKPHKSLAELAKVHGPIMSLKFG--QVTTVVISSATMAKQVLQDHDKSLCNRNVP---------ESVGS----I-QKDE 111 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~~~~~g--~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~---------~~~~~----~-~~~~ 111 (494)
..+++.++.+++ +||||+++++| +.++++|+||+++++|+.++ .|.+++.. ..... + ...+
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 457899999986 59999999987 67899999999999999864 56655421 01000 0 0112
Q ss_pred CCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhccc
Q 011093 112 YGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQA-AFDTVVNLLSNSIFSVD 190 (494)
Q Consensus 112 ~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~ 190 (494)
.+ ++..+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+ . +++|+... ...+++++++.+ ||.+
T Consensus 96 ~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~~-~G~~ 168 (425)
T 2z3t_A 96 NW-LVFLDPPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRA---Q-RRPDLVEGFAAPLPILVISAL-LGIP 168 (425)
T ss_dssp TC-GGGCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHHH-HTCC
T ss_pred cc-cccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-hCCC
Confidence 34 34567999999999998 8999999999999999999999999864 2 37998775 478999999998 9987
Q ss_pred ccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhH
Q 011093 191 LADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDM 270 (494)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~ 270 (494)
.+.. ..+.+....+... ...+| + .....++..+..+.+.+++.+.+++++++ ...|+
T Consensus 169 ~~~~-----~~~~~~~~~~~~~------~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dl 225 (425)
T 2z3t_A 169 EEDH-----TWLRANAVALQEA------STTRA----R-DGRGYARAEAASQEFTRYFRREVDRRGGD-------DRDDL 225 (425)
T ss_dssp GGGH-----HHHHHHHHHHHTT------CTTCC----C----HHHHHHHHHHHHHHHHHHHHCC--------------CH
T ss_pred HHHH-----HHHHHHHHHHHhh------ccccC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCH
Confidence 6431 3344333332211 11112 1 11112345566667777777777666542 34589
Q ss_pred HHHHhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhH
Q 011093 271 LDTLLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYL 349 (494)
Q Consensus 271 ~~~ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l 349 (494)
++.|++...+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |+
T Consensus 226 l~~ll~~~~~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l 287 (425)
T 2z3t_A 226 LTLLVRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------------------ST 287 (425)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GH
T ss_pred HHHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------hH
Confidence 9999986543 4699999999999999999999999999999999999999999999963 79
Q ss_pred HHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCcccccc
Q 011093 350 QTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIP 429 (494)
Q Consensus 350 ~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~ 429 (494)
+|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..++|
T Consensus 288 ~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~ 356 (425)
T 2z3t_A 288 PAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA----------ERQVG 356 (425)
T ss_dssp HHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS----------SCCCT
T ss_pred HHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC----------CCCCC
Confidence 999999999999999 5789999999999999999999999999999999999999999999995 15899
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 430 FGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 430 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
||.|+|.|+|++||.+|++++++.|+++| +++ .++
T Consensus 357 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~ 392 (425)
T 2z3t_A 357 FGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGA 392 (425)
T ss_dssp TCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSC
T ss_pred CCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCC
Confidence 99999999999999999999999999999 899 654
No 59
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=9.3e-59 Score=438.18 Aligned_cols=348 Identities=18% Similarity=0.224 Sum_probs=289.3
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCC----eeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCCh
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQ----VTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVST 121 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~----~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (494)
.+..+|+.++.++ ++||||+++++++ .++++|+||+++++|++ +...|.+++........ ..+.+.++..+|+
T Consensus 9 ~~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~ 85 (384)
T 3oo3_A 9 RLRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADR-ALLPGILQAYDPP 85 (384)
T ss_dssp EETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC------CCCTTCGGGCCTT
T ss_pred ccccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccc-cccccccccCCCh
Confidence 3467899999999 5999999999886 89999999999999995 44667766544322211 1133456677899
Q ss_pred hHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhcccccccCcchHHH
Q 011093 122 KWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFSVDLADANSDSARE 201 (494)
Q Consensus 122 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~ 201 (494)
.|+++|+.+. +.|+++.++.+.+.+.+.++.+++.+.+ .++++|+.+++...+.+.+...+||.+.+.. .+
T Consensus 86 ~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~-----~~ 156 (384)
T 3oo3_A 86 DHTRLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ-----AE 156 (384)
T ss_dssp HHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-----HH
T ss_pred hHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-----HH
Confidence 9999999998 8999999999999999999999999975 4678999999998888888888999876432 34
Q ss_pred HHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCC
Q 011093 202 FKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESE 281 (494)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~ 281 (494)
+.+.+..+.. . ...++..+..+.+.+++.+.+++++++ ...|+++.|++. ++.
T Consensus 157 ~~~~~~~~~~---~----------------~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~d~l~~ll~~-~~~ 209 (384)
T 3oo3_A 157 LSRMIRESRE---S----------------RLPRQRTLSGLGIVNYTKRLTSGKRRD-------PGDGMIGVIVRE-HGA 209 (384)
T ss_dssp HHHHHHHHHH---C----------------SCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHH-HGG
T ss_pred HHHHHHHHhc---c----------------CChHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHh-cCC
Confidence 4444444332 0 012345566677888888888776542 345999999987 346
Q ss_pred CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCC
Q 011093 282 EIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHP 361 (494)
Q Consensus 282 ~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~ 361 (494)
.++++++.+++..+++||+|||+++++|++++|++||++|+++++|++. ++|||+|+||++|
T Consensus 210 ~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i~E~lRl~p 271 (384)
T 3oo3_A 210 EISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSATEEVLRHAS 271 (384)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHHHHHHHhCC
Confidence 7999999999999999999999999999999999999999999999874 8999999999999
Q ss_pred CCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChH
Q 011093 362 PVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLP 441 (494)
Q Consensus 362 ~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 441 (494)
+++..++|.+.+|++++||.||||+.|.++.+++|| +||++|+|+||. ..|+|||.|+|.|+|++
T Consensus 272 ~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~ 336 (384)
T 3oo3_A 272 IVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITREK----------ATHMAFGHGIHHCIGAP 336 (384)
T ss_dssp SCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC----------CCCCTTCCSTTSCTTHH
T ss_pred cccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCCC----------CCcCCCCCCCcCCCCHH
Confidence 998777899999999999999999999999999999 999999999962 26899999999999999
Q ss_pred HHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 442 LAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 442 ~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
||.+|++++++.|+++| ++++.++
T Consensus 337 lA~~e~~~~l~~ll~~f~~~~l~~~ 361 (384)
T 3oo3_A 337 LARLQLRVALPAVVGRFPSLRLAVP 361 (384)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred HHHHHHHHHHHHHHHhCCCCeeCCC
Confidence 99999999999999999 9999765
No 60
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=2.9e-59 Score=443.12 Aligned_cols=351 Identities=21% Similarity=0.249 Sum_probs=282.5
Q ss_pred CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccc------cccccC-CCCcccccCC
Q 011093 48 GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESV------GSIQKD-EYGIPWLPVS 120 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~ 120 (494)
..+|+.++.++ ++||||++ + |.++++|+||+++++++.+ ..|..++..... ...... +.+ ++..+|
T Consensus 12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g 84 (397)
T 3buj_A 12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDI-ILFQDE 84 (397)
T ss_dssp HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTC-GGGCCT
T ss_pred ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccc-cccCCc
Confidence 35788899877 59999999 6 5789999999999999975 245443211100 011100 233 455679
Q ss_pred hhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhH-HHHHHHHHHHHHHHhcccccccCcchH
Q 011093 121 TKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQ-AAFDTVVNLLSNSIFSVDLADANSDSA 199 (494)
Q Consensus 121 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~ 199 (494)
+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+ ++++|+.. +...+++++++.+ ||.+.+..
T Consensus 85 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~----- 153 (397)
T 3buj_A 85 PDHGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAADW----- 153 (397)
T ss_dssp THHHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-----
T ss_pred hhHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH-----
Confidence 99999999998 8999999999999999999999999863 35799865 4578999999998 99876432
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcccc
Q 011093 200 REFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISE 279 (494)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~ 279 (494)
..+.+....+..... +. + .....++..+..+.+.+++.+.+++++++ ...|+++.|++..+
T Consensus 154 ~~~~~~~~~~~~~~~--------~~---~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 214 (397)
T 3buj_A 154 GAVGRWSRDVGRTLD--------RG---A-SAEDMRRGHAAIAEFADYVERALARRRRE-------GGEDLLALMLDAHD 214 (397)
T ss_dssp HHHHHHHHHHHGGGC--------SS---C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcC--------CC---C-ChHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCCCHHHHHHHhhh
Confidence 334443333322111 00 1 11122445566777888888888877654 23589999998754
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhc
Q 011093 280 SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRL 359 (494)
Q Consensus 280 ~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl 359 (494)
++.++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+||+
T Consensus 215 ~~~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl 276 (397)
T 3buj_A 215 RGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD------------------LLAQAVEECLRY 276 (397)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH------------------HHHHHHHHHHhh
Confidence 33399999999999999999999999999999999999999999999963 799999999999
Q ss_pred CCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCC
Q 011093 360 HPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPG 439 (494)
Q Consensus 360 ~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G 439 (494)
+|+++ .++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||. ..++|||.|+|.|+|
T Consensus 277 ~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G 345 (397)
T 3buj_A 277 DPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------VPSMSFGAGMRYCLG 345 (397)
T ss_dssp SCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------CCCSTTCCGGGCCTT
T ss_pred cCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------CCCCCCCCCCccCCC
Confidence 99999 5789999999999999999999999999999999999999999999994 157999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 440 LPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 440 ~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
++||.+|++++++.| ++| ++++.++
T Consensus 346 ~~lA~~e~~~~l~~l-~~f~~~~~~~~ 371 (397)
T 3buj_A 346 SYLARTQLRAAVAAL-ARLPGLRLGCA 371 (397)
T ss_dssp HHHHHHHHHHHHHHH-HTSTTCEESSC
T ss_pred HHHHHHHHHHHHHHH-hcCCCceeCCC
Confidence 999999999999999 999 8999764
No 61
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=1.9e-59 Score=444.98 Aligned_cols=373 Identities=22% Similarity=0.222 Sum_probs=292.3
Q ss_pred CCCCcHHHHHHHHhhCCceEEecCC--eeEEEeCCHHHHHHHHHhcCcccCCCCCccccccc--ccCC-CCcccccCChh
Q 011093 48 GHKPHKSLAELAKVHGPIMSLKFGQ--VTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSI--QKDE-YGIPWLPVSTK 122 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~~~~~g~--~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~ 122 (494)
..+|+..+.++++ ||||+++...| .++++|++++++++++++. ..|..++........ .... .+.++..+|+.
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 113 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ 113 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHH
Confidence 3589999999987 99999996344 7899999999999999643 456555432221110 0001 23456788999
Q ss_pred HHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchHHH
Q 011093 123 WKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSARE 201 (494)
Q Consensus 123 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~ 201 (494)
|+++|+.+. +.|++..++.+.+.+++.++.+++.+.+ ++++|+..++ ..+++++++. +||.+... ...
T Consensus 114 h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-----~~~ 182 (415)
T 3mgx_A 114 HRKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPAED-----EDM 182 (415)
T ss_dssp HHHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCGGG-----HHH
T ss_pred HHHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH-----HHH
Confidence 999999998 8999999999999999999999988753 3479998877 6799999997 58865432 244
Q ss_pred HHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCC
Q 011093 202 FKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESE 281 (494)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~ 281 (494)
+.+....+.. .....+.| ....+..+++.+++.+.+++++++ ...|+++.|++..
T Consensus 183 ~~~~~~~~~~----~~~~~~~~-----------~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~ll~~~--- 237 (415)
T 3mgx_A 183 LIDLTNHAFG----GEDELFDG-----------MTPRQAHTEILVYFDELITARRKE-------PGDDLVSTLVTDD--- 237 (415)
T ss_dssp HHHHHHHHTS----CCC----C-----------CCHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCT---
T ss_pred HHHHHHHHHc----ccCcccch-----------HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhCC---
Confidence 4444433321 10011111 111255667778888888777653 3458999999864
Q ss_pred CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCC
Q 011093 282 EIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHP 361 (494)
Q Consensus 282 ~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~ 361 (494)
.++++|+..++..+++||+|||+++++|++++|++||++|+++++|+ +|+++||+|+||++|
T Consensus 238 ~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~p 299 (415)
T 3mgx_A 238 DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVVEEVLRWTS 299 (415)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999999999999999996 789999999999999
Q ss_pred CCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChH
Q 011093 362 PVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLP 441 (494)
Q Consensus 362 ~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 441 (494)
+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|||+||. ..++|||.|+|.|+|++
T Consensus 300 p~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------~~~l~FG~G~r~C~G~~ 368 (415)
T 3mgx_A 300 PAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------NRHITFGHGMHHCLGSA 368 (415)
T ss_dssp CBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCGGGCCTTHH
T ss_pred cccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccCcCHH
Confidence 9995 689999999999999999999999999999999999999999999983 15899999999999999
Q ss_pred HHHHHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 442 LAIRMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 442 ~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
||.+|++++++.|+++| ++++..+. ..............++.+++|
T Consensus 369 lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 369 LARIELSVVLRVLAERVSRVDLEREP-----AWLRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEECSCC-----EECSCSSBCCEEECEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCccCCCc-----ccccCCcccCceeeeEEEecC
Confidence 99999999999999999 89986431 111122233345556666665
No 62
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=1.5e-59 Score=445.48 Aligned_cols=351 Identities=16% Similarity=0.190 Sum_probs=286.0
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHH
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKK 125 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 125 (494)
.+..+|+.++.+++++ |||+++..++ +.++|+||+++++++.+. ..|.+++...... ........++..+|+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~-~~~~~~~~~~~~~g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPG-LGKVMQFIPLQQDGAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTT-HHHHHCCTTTTCCHHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCc-cccccccCccccCCcHHHH
Confidence 4467899999999999 9999999875 588999999999999754 4566655221111 1111122456678999999
Q ss_pred HHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchHHHHHH
Q 011093 126 LRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSAREFKD 204 (494)
Q Consensus 126 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~ 204 (494)
+|+.+. +.|++..++.+.+.+.+.++.+++.+.+ ++++|+...+ ..++.++++. +||.+... ...+.+
T Consensus 97 ~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-----~~~~~~ 165 (396)
T 3oft_A 97 FRTPVM-KGLASRFVVALEPKVQAVARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLED-----RPRLRQ 165 (396)
T ss_dssp HHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG-----HHHHHH
T ss_pred HHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH-----HHHHHH
Confidence 999998 8999999999999999999999999864 3468886665 4566666665 68866432 244444
Q ss_pred HHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-CCC
Q 011093 205 SMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-EEI 283 (494)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~l 283 (494)
....+.. . .. .++..+..+.+.+++.+.++++++. ...|+++.|++...+ .++
T Consensus 166 ~~~~~~~---~---------~~-------~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~~~l 219 (396)
T 3oft_A 166 LGVQLTR---P---------DG-------SMTVEQLKQAADDYLWPFIEKRMAQ-------PGDDLFSRILSEPVGGRPW 219 (396)
T ss_dssp HHHHHHS---C---------CS-------SCCHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSCBTTBCC
T ss_pred HHHHHhC---C---------CC-------HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccCCCC
Confidence 4433321 0 00 1234566677888888888777654 346999999987554 569
Q ss_pred CHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCC
Q 011093 284 DRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPV 363 (494)
Q Consensus 284 s~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~ 363 (494)
+++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+||++|++
T Consensus 220 ~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~ 281 (396)
T 3oft_A 220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPAAADELMRRYPTV 281 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHCCCB
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCcc
Confidence 9999999999999999999999999999999999999999999975 6999999999999999
Q ss_pred CCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHH
Q 011093 364 PLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLA 443 (494)
Q Consensus 364 ~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a 443 (494)
.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||+. +..|+|||.|+|.|+|++||
T Consensus 282 --~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~~~FG~G~r~C~G~~lA 351 (396)
T 3oft_A 282 --AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRHTTMGVGAHRCVGAGLA 351 (396)
T ss_dssp --EEEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGSSTTCCGGGCCTTHHHH
T ss_pred --cCceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCcccCCCCCccCcCHHHH
Confidence 46799999999999999999999999999999999999999999999963 23799999999999999999
Q ss_pred HHHHHHHHHHHhhhc-eeecCCC
Q 011093 444 IRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 444 ~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
.+|++++++.|+++| ++++.++
T Consensus 352 ~~e~~~~l~~ll~~~~~~~l~~~ 374 (396)
T 3oft_A 352 RMEVIVFLREWLGGMPEFALAPD 374 (396)
T ss_dssp HHHHHHHHHHHHHHSCCEEECSS
T ss_pred HHHHHHHHHHHHHhCCCceECCC
Confidence 999999999999999 9999865
No 63
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=1.4e-58 Score=442.13 Aligned_cols=357 Identities=17% Similarity=0.191 Sum_probs=291.3
Q ss_pred CCCcHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHhcCcccCCCCCc--c-cccccccCCCCccccc
Q 011093 49 HKPHKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQDHDKSLCNRNVP--E-SVGSIQKDEYGIPWLP 118 (494)
Q Consensus 49 ~~~~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 118 (494)
.+++.++.+++ +|||||+++++ +.++++|+||+++++|+.++ ..|.+++.. . ....+...+.+ ++..
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-l~~~ 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGS-MIVL 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHG-GGGC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccc-cccC
Confidence 46788999996 69999999986 66899999999999999865 456665421 1 11111101233 3456
Q ss_pred CChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcc
Q 011093 119 VSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSD 197 (494)
Q Consensus 119 ~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~ 197 (494)
+|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+.+. .+++++|+..++ ..+++++++.+ ||.+++..
T Consensus 121 dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~--- 194 (435)
T 2wm5_A 121 DDPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKADH--- 194 (435)
T ss_dssp CTTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH---
T ss_pred CcHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH---
Confidence 7999999999998 89999999999999999999999999763 234589998765 78999999999 99987532
Q ss_pred hHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcc
Q 011093 198 SAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNI 277 (494)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~ 277 (494)
..+.+....+.... .|.+.. ..++..+..+.+.+++.+.+++++++ ...|+++.|++.
T Consensus 195 --~~~~~~~~~~~~~~--------~p~~~~-----~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~ 252 (435)
T 2wm5_A 195 --QRIFHWTNVILGFG--------DPDLAT-----DFDEFMQVSADIGAYATALAEDRRVN-------HHDDLTSSLVEA 252 (435)
T ss_dssp --HHHHHHHHHHHHTT--------CTTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHC
T ss_pred --HHHHHHHHHHhccC--------Ccchhh-----hHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhh
Confidence 34444444443311 132211 12345566777888888888777652 345899999987
Q ss_pred ccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHH
Q 011093 278 SES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKET 356 (494)
Q Consensus 278 ~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~ 356 (494)
..+ ..++++++..++..+++||+|||+++++|++++|++||++|+++++|++ +|++|||+|+
T Consensus 253 ~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~l~a~i~E~ 315 (435)
T 2wm5_A 253 EVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-----------------GLAPTAVEEI 315 (435)
T ss_dssp CBTTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HHHHHHHHHH
T ss_pred hccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-----------------hHHHHHHHHH
Confidence 543 4599999999999999999999999999999999999999999999986 3799999999
Q ss_pred hhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCC-CCC
Q 011093 357 LRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGA-GRR 435 (494)
Q Consensus 357 lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~-G~r 435 (494)
||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+|+ + ..|+|||. |+|
T Consensus 316 lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~--------~~~lpFG~~G~r 384 (435)
T 2wm5_A 316 VRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--P--------NPHLGFGGGGAH 384 (435)
T ss_dssp HHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S--------CCCCTTCSSSTT
T ss_pred HhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--C--------CCCCCCCCCCCC
Confidence 99999999 578999999999999999999999999999999999999999999994 1 25899999 999
Q ss_pred CCCChHHHHHHHHHHHHHHhhhce-eecCC
Q 011093 436 ICPGLPLAIRMLYLMLGSLIKSFD-WKLDN 464 (494)
Q Consensus 436 ~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~ 464 (494)
.|+|++||.+|++++++.|+++|+ +++.+
T Consensus 385 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~ 414 (435)
T 2wm5_A 385 FCLGANLARREIRVAFDELRRQMPDVVATE 414 (435)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence 999999999999999999999997 99865
No 64
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=5e-59 Score=444.76 Aligned_cols=377 Identities=16% Similarity=0.194 Sum_probs=293.5
Q ss_pred CCCCcHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHH
Q 011093 48 GHKPHKSLAELAKVHG-PIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKL 126 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 126 (494)
..+|+.++.++++++| ||+++..++ ++++|+||+.+++|++ +...|.+++.... ......+...++..+|+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~-~~~~~~~~~~~~~~dg~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVP-REAGEAYDMVPTKLDPPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSS-HHHHHHCCCTTTTCCTTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCC-cccccccccCCccCCcHHHHHH
Confidence 4588999999987766 899998876 5899999999999995 4456666542211 1111111233566789999999
Q ss_pred HHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchHHHHHHH
Q 011093 127 RKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSAREFKDS 205 (494)
Q Consensus 127 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~ 205 (494)
|+.+. +.|++..++.+.+.+.+.++.+++.|.+ ++++|+...+ ..++.++++. +||.+... ...+.+.
T Consensus 114 R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-----~~~~~~~ 182 (421)
T 3lxh_A 114 RKAID-KGLNLAEIRKLEDQIRTIAVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVED-----ATKLGLL 182 (421)
T ss_dssp HHHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG-----HHHHHHH
T ss_pred HHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHHH-----HHHHHHH
Confidence 99998 8999999999999999999999998853 4578875555 5577777765 58876533 2444444
Q ss_pred HHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-CCCC
Q 011093 206 MWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-EEID 284 (494)
Q Consensus 206 ~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls 284 (494)
...+... ...+| ....++..+..+.+.+++.+.++++++. ...|+++.|++...+ .+++
T Consensus 183 ~~~~~~~------~~~~p-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~~~~l~ 242 (421)
T 3lxh_A 183 ANEMTRP------SGNTP-------EEQGRSLEAANKGFFEYVAPIIAARRGG-------SGTDLITRILNVEIDGKPMP 242 (421)
T ss_dssp HHHHHSC------CCSSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTSCBTTBCCC
T ss_pred HHHHhcc------ccCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhccCCCCC
Confidence 4443211 01111 1123455666777777777777666442 456999999987554 5699
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCC
Q 011093 285 RNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVP 364 (494)
Q Consensus 285 ~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~ 364 (494)
++|+.+++..+++||+|||+++++|++++|++||++|+++++|++ |+++||+|+||++|++
T Consensus 243 ~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~- 303 (421)
T 3lxh_A 243 DDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFRRFAVV- 303 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCCB-
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCcc-
Confidence 999999999999999999999999999999999999999999986 6999999999999999
Q ss_pred CcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHH
Q 011093 365 LLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAI 444 (494)
Q Consensus 365 ~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~ 444 (494)
. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+|| ...|+|||.|+|.|+|++||.
T Consensus 304 ~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~~lA~ 372 (421)
T 3lxh_A 304 S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR----------DVTHSTFAQGPHRCAGMHLAR 372 (421)
T ss_dssp E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHH
T ss_pred C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC----------CCCCCCCCCcCccCcCHHHHH
Confidence 4 67999999999999999999999999999999999999999999995 226899999999999999999
Q ss_pred HHHHHHHHHHhhhc-eeecCCCCCCCCCCccccccccccCCCCeeEeee
Q 011093 445 RMLYLMLGSLIKSF-DWKLDNEVTSGNIDMEEKFGITLQKAQPLRVVPV 492 (494)
Q Consensus 445 ~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (494)
+|++++++.|+++| ++++.++ ........ ........++.++|+
T Consensus 373 ~e~~~~l~~ll~~fp~~~l~~~---~~~~~~~~-~~~~~~~lpv~~~p~ 417 (421)
T 3lxh_A 373 LEVTVMLQEWLARIPEFRLKDR---AVPIYHSG-IVAAVENIPLEWEPQ 417 (421)
T ss_dssp HHHHHHHHHHHHHCCCCEECTT---CCCEEECS-SBCEEECCEEECCCC
T ss_pred HHHHHHHHHHHHhCCCcEECCC---CCceeccc-cccCceeeeEEEecc
Confidence 99999999999999 9999765 22333222 222334455666554
No 65
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=3.8e-59 Score=442.18 Aligned_cols=348 Identities=19% Similarity=0.225 Sum_probs=277.1
Q ss_pred CcHHHHHHHHhhCCceEEecC-Ce---eEEEeCCHHHHHHHHHhcCcccCCCCC------ccccccc--ccCCCCccccc
Q 011093 51 PHKSLAELAKVHGPIMSLKFG-QV---TTVVISSATMAKQVLQDHDKSLCNRNV------PESVGSI--QKDEYGIPWLP 118 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~g-~~---~~v~v~dp~~~~~i~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~ 118 (494)
++..+.+|+++ |||++++++ |. ++++|+||+++++++.++ ..|..++. ....... ...+.+ ++..
T Consensus 15 ~~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 91 (398)
T 1lfk_A 15 GLDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGN-LMDY 91 (398)
T ss_dssp TTEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTC-GGGC
T ss_pred CCChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccC-cccc
Confidence 34455567777 999999875 55 899999999999999322 23554432 0101101 111333 4456
Q ss_pred CChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHH-HHHHHHHHHHhcccccccCcc
Q 011093 119 VSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFD-TVVNLLSNSIFSVDLADANSD 197 (494)
Q Consensus 119 ~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~-~~~~~~~~~~fG~~~~~~~~~ 197 (494)
+|+.|+++|+.+. +.|+++.++.+.+.+.+.++.+++.+.+ .++++|+.+++.. ++.++++. +||.+++.
T Consensus 92 ~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---- 162 (398)
T 1lfk_A 92 DPPEHTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDD---- 162 (398)
T ss_dssp CTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG----
T ss_pred CCHHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH----
Confidence 7999999999998 8899999999999999999999999974 3568999998886 88999987 69987642
Q ss_pred hHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcc
Q 011093 198 SAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNI 277 (494)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~ 277 (494)
...+.+....+. . . ....++..+..+.+.+++.+.++++++. ...|+++.|++.
T Consensus 163 -~~~~~~~~~~~~----~-----~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~ 216 (398)
T 1lfk_A 163 -RDMFMKLCHGHL----D-----A---------SLSQKRRAALGDKFSRYLLAMIARERKE-------PGEGMIGAVVAE 216 (398)
T ss_dssp -HHHHHHHHHHTT----C-----T---------TSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHH
T ss_pred -HHHHHHHHHHHH----h-----c---------ccchHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHh
Confidence 133433332211 0 0 0112345566677778888888776653 345899999986
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHh
Q 011093 278 SESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETL 357 (494)
Q Consensus 278 ~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l 357 (494)
. +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+|
T Consensus 217 ~-~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l 277 (398)
T 1lfk_A 217 Y-GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDELI 277 (398)
T ss_dssp H-GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHHHHHHH
T ss_pred c-CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHH
Confidence 5 45799999999999999999999999999999999999999999999975 6999999999
Q ss_pred hcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCC
Q 011093 358 RLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRIC 437 (494)
Q Consensus 358 Rl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C 437 (494)
|++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..|+|||.|+|.|
T Consensus 278 Rl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C 347 (398)
T 1lfk_A 278 RYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------IPHVAFGHGVHHC 347 (398)
T ss_dssp HHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------CCCCTTCCSTTSC
T ss_pred HhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------CCCCCCCCCCCcC
Confidence 999999966789999999999999999999999999999999999999999999983 1589999999999
Q ss_pred CChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 438 PGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 438 ~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
+|++||.+|++++++.|+++| ++++.++
T Consensus 348 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 376 (398)
T 1lfk_A 348 LGAALARLELRTVFTELWRRFPALRLADP 376 (398)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCTTCEESST
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEeCCC
Confidence 999999999999999999999 8998643
No 66
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.5e-58 Score=441.82 Aligned_cols=361 Identities=19% Similarity=0.197 Sum_probs=286.4
Q ss_pred CcHHHHHHHHhhCCce--EEe-cCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccc-----------c-CCCCcc
Q 011093 51 PHKSLAELAKVHGPIM--SLK-FGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQ-----------K-DEYGIP 115 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~--~~~-~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~ 115 (494)
|+..+.++ ++||||+ ++. +|+.++++|+++++++++++++ ..|..++......... . .....+
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 78888888 6799999 988 7778999999999999999765 5666655432211110 0 011245
Q ss_pred cccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccccccc
Q 011093 116 WLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADA 194 (494)
Q Consensus 116 ~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~ 194 (494)
+..+|+.|+++|+.+. +.|+++.++.+.+.+++.++.+++.+.+ .++++|+...+ ..+++++++.+ ||.+...
T Consensus 125 ~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~- 198 (450)
T 3tkt_A 125 VQMDAPKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGVPPED- 198 (450)
T ss_dssp GGCCTTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG-
T ss_pred ccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCCChhH-
Confidence 6778999999999998 9999999999999999999999999975 36789988877 69999999985 8876432
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCccccccccccCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHH
Q 011093 195 NSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLD-IQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDT 273 (494)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ 273 (494)
...+.+....+. ......+.++..++. .....++..+..+++.+++.+.+++++++ ...|+++.
T Consensus 199 ----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ 263 (450)
T 3tkt_A 199 ----EPKMLFLTQQMF----GGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN-------PTDDVATV 263 (450)
T ss_dssp ----HHHHHHHHHTTS----CCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHH
T ss_pred ----HHHHHHHHHHHh----ccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHH
Confidence 234443333321 111111122211110 12233556667777888888888776553 34589999
Q ss_pred HhccccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHH
Q 011093 274 LLNISES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTI 352 (494)
Q Consensus 274 ll~~~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~ 352 (494)
|++...+ ..++++|+.+++..+++||+|||+++++|++++|++||++|++|++|+ +|+++|
T Consensus 264 ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~ 325 (450)
T 3tkt_A 264 IANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR------------------NLLPGI 325 (450)
T ss_dssp HHTCEETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHH
T ss_pred HHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH------------------HHHHHH
Confidence 9987644 469999999999999999999999999999999999999999999996 379999
Q ss_pred HHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCC
Q 011093 353 VKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGA 432 (494)
Q Consensus 353 i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~ 432 (494)
|+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|||+|+. ..++|||.
T Consensus 326 i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~----------~~~l~FG~ 394 (450)
T 3tkt_A 326 VEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA----------NRHLAFGA 394 (450)
T ss_dssp HHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----------TCSSTTCC
T ss_pred HHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----------CCCCCCCC
Confidence 9999999999994 789999999999999999999999999999999999999999999952 15899999
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhhhce-eecC
Q 011093 433 GRRICPGLPLAIRMLYLMLGSLIKSFD-WKLD 463 (494)
Q Consensus 433 G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~ 463 (494)
|+|.|+|++||.+|++++++.|+++|+ +++.
T Consensus 395 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~ 426 (450)
T 3tkt_A 395 GSHQCLGLHLARLEMRVLLDVLLDRVDSLELA 426 (450)
T ss_dssp STTCCTTHHHHHHHHHHHHHHHHHHEEEEEES
T ss_pred cCccCccHHHHHHHHHHHHHHHHHhCCCceeC
Confidence 999999999999999999999999998 6665
No 67
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=1.7e-58 Score=437.02 Aligned_cols=349 Identities=19% Similarity=0.246 Sum_probs=278.2
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccC-C-CCCc--cccc--cccc-CCCCcccc
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLC-N-RNVP--ESVG--SIQK-DEYGIPWL 117 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~ 117 (494)
.+..+++..+.+| ++|||||++++ |+.++++|+||+++++++.++ .|. + ++.. .... .+.. .+.++++.
T Consensus 13 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (396)
T 1n40_A 13 ARGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI 89 (396)
T ss_dssp CCSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH
T ss_pred ccccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH
Confidence 3567899999999 99999999997 788999999999999999864 244 3 3211 1110 0100 12233322
Q ss_pred cCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCc
Q 011093 118 PVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANS 196 (494)
Q Consensus 118 ~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~ 196 (494)
.|+++|+.+. +.|++. ++.+.+.+.+.++++++.+.+ +++++|+...+ ..+++++++. +||.+++.
T Consensus 90 ----~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--- 156 (396)
T 1n40_A 90 ----ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQED--- 156 (396)
T ss_dssp ----HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGGG---
T ss_pred ----HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChhh---
Confidence 8999999998 789999 999999999999999999975 25689998665 5899999998 89987642
Q ss_pred chHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhc
Q 011093 197 DSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLN 276 (494)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~ 276 (494)
..++.+....+.. . ....| .++..+..+.+ +++.+.++ + .+ ...|+++.|++
T Consensus 157 --~~~~~~~~~~~~~---~---~~~~p----------~~~~~~~~~~~-~~~~~~i~------~-~~--~~~dll~~ll~ 208 (396)
T 1n40_A 157 --GPKLFRSLSIAFM---S---SADPI----------PAAKINWDRDI-EYMAGILE------N-PN--ITTGLMGELSR 208 (396)
T ss_dssp --HHHHHHTHHHHTB---C---CSSCC----------HHHHHHHHHHH-HHHHHHHH------C-TT--CCSHHHHHHHH
T ss_pred --HHHHHHHHHHHhc---c---ccCCC----------HHHHHHHHHHH-HHHHHHHh------C-CC--CCCCHHHHHHH
Confidence 1334443333211 0 00011 12344445555 66666554 1 11 24699999998
Q ss_pred cc-c--CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHH
Q 011093 277 IS-E--SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIV 353 (494)
Q Consensus 277 ~~-~--~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i 353 (494)
.. + +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||
T Consensus 209 ~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i 270 (396)
T 1n40_A 209 LRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------LIPAGV 270 (396)
T ss_dssp HHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHH
T ss_pred hhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------------------HHHHHH
Confidence 65 2 35699999999999999999999999999999999999999999999963 699999
Q ss_pred HHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCC
Q 011093 354 KETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAG 433 (494)
Q Consensus 354 ~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G 433 (494)
+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.+ ..++|||.|
T Consensus 271 ~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------~~~~~FG~G 341 (396)
T 1n40_A 271 EELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP---------TSHLAFGRG 341 (396)
T ss_dssp HHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---------TCSSTTCCG
T ss_pred HHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---------CCCCCCCCC
Confidence 99999999999667899999999999999999999999999999999999999999999963 268999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 434 RRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 434 ~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 342 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 374 (396)
T 1n40_A 342 QHFCPGSALGRRHAQIGIEALLKKMPGVDLAVP 374 (396)
T ss_dssp GGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHhCccccccCC
Confidence 9999999999999999999999999 5998754
No 68
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=7.6e-58 Score=437.00 Aligned_cols=360 Identities=21% Similarity=0.296 Sum_probs=282.4
Q ss_pred cCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccc-------cCCCCccccc
Q 011093 46 ELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQ-------KDEYGIPWLP 118 (494)
Q Consensus 46 ~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 118 (494)
.+..+|+.++.++ ++||||+++++| +++|+||+++++++++. ..+..++......... ......++..
T Consensus 26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (418)
T 3r9b_A 26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL 100 (418)
T ss_dssp GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc
Confidence 4468999999998 578999998876 89999999999999754 3333333221111110 0012234667
Q ss_pred CChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhcccccccCcc
Q 011093 119 VSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQA-AFDTVVNLLSNSIFSVDLADANSD 197 (494)
Q Consensus 119 ~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~~~~ 197 (494)
+|+.|+++|+.++ +.|+++.++.+.+.+.+.++.+++ +. .++++|+... ...+++++++. +||.+....
T Consensus 101 dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--- 170 (418)
T 3r9b_A 101 DPPDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIEDE--- 170 (418)
T ss_dssp CTTHHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH---
T ss_pred CCchHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHHHH---
Confidence 7999999999998 999999999999999999999998 74 3458997654 46899999999 899876432
Q ss_pred hHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcc
Q 011093 198 SAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNI 277 (494)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~ 277 (494)
..+.+....+..... .++.+..+ .....++..+..+.+.+++.+.+++++++ ...|+++.|++.
T Consensus 171 --~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~ 234 (418)
T 3r9b_A 171 --PKFSRASALLAAALD------PFLALTGE-TSDLFDEQMKAGMWLRDYLRALIDERRRT-------PGEDLMSGLVAV 234 (418)
T ss_dssp --HHHHHHHHHHHHTTS------CHHHHHSS-CCTTHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSSHHHHHHHH
T ss_pred --HHHHHHHHHHHhhcC------cccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHHHHHHh
Confidence 333333333322111 11111111 11223455666677777777777665432 356999999987
Q ss_pred ccC-CCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHH
Q 011093 278 SES-EEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKET 356 (494)
Q Consensus 278 ~~~-~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~ 356 (494)
..+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+
T Consensus 235 ~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~ 296 (418)
T 3r9b_A 235 EESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RASAVIEET 296 (418)
T ss_dssp HHHSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHHHHHH
T ss_pred hhccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHHHHHH
Confidence 443 5699999999999999999999999999999999999999999999974 699999999
Q ss_pred hhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCC
Q 011093 357 LRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRI 436 (494)
Q Consensus 357 lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~ 436 (494)
||++|+++. .+|.+++|++++||.||+|+.|.++.+++||||++|+||++|||+|. ...++|||.|+|.
T Consensus 297 lRl~p~~~~-~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~FG~G~r~ 365 (418)
T 3r9b_A 297 MRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----------QIRHLGFGKGAHF 365 (418)
T ss_dssp HHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGC
T ss_pred HHhCCcccc-ceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------CCCCcCCCCcCcc
Confidence 999999997 46999999999999999999999999999999999999999999992 1258999999999
Q ss_pred CCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 437 CPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 437 C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
|+|++||.+|++++++.|+++| ++++.++
T Consensus 366 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 395 (418)
T 3r9b_A 366 CLGAPLARLEATVALPALAARFPEARLSGE 395 (418)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred CccHHHHHHHHHHHHHHHHHhCccceeCCC
Confidence 9999999999999999999999 8998654
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=3.1e-57 Score=431.72 Aligned_cols=357 Identities=17% Similarity=0.190 Sum_probs=283.1
Q ss_pred CCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCcccCCCCC---ccccc-----ccccCCCCcccccC
Q 011093 49 HKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQDHDKSLCNRNV---PESVG-----SIQKDEYGIPWLPV 119 (494)
Q Consensus 49 ~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~ 119 (494)
.+|+.++.+++++ |||+++.. ++.++++|++++++++++.+. ..|+.... ..... .......+.++..+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC
Confidence 5689999999876 99999986 457799999999999999865 33444321 11100 00001223456778
Q ss_pred ChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcch
Q 011093 120 STKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDS 198 (494)
Q Consensus 120 ~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~ 198 (494)
|+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+. .++++|+...+ ..++.++++. +||.+....
T Consensus 116 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~---- 185 (426)
T 3rwl_A 116 RPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEER---- 185 (426)
T ss_dssp TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT----
T ss_pred chHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHHH----
Confidence 999999999998 899999999999999999999998873 46789977666 6788888875 899764332
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccc
Q 011093 199 AREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNIS 278 (494)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~ 278 (494)
..+.+... ...... .+.. ........+..+++.+++.++++++.+ .. ...|+++.|++..
T Consensus 186 -~~~~~~~~----~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~-~~~dll~~ll~~~ 245 (426)
T 3rwl_A 186 -RKLTRWSD----VTTAAP----GGGV-----VESWDQRKTELLECAAYFQVLWNERVN-----KD-PGNDLISMLAHSP 245 (426)
T ss_dssp -HHHHHHHH----HHTCCT----TSSS-----CSSHHHHHHHHHHHHHHHHHHHHHHHT-----SC-CCSSHHHHHHHCG
T ss_pred -HHHHHHHH----HHHhcc----Cccc-----cccHHHHHHHHHHHHHHHHHHHHHHhh-----cC-CCCCHHHHHHhcc
Confidence 22222211 111100 0111 011233445567777777777776621 11 4569999999987
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhh
Q 011093 279 ESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLR 358 (494)
Q Consensus 279 ~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR 358 (494)
.+.+++++|+.+++..+++||+|||+++++|++++|++||++|++|++|+ +|+++||+|+||
T Consensus 246 ~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~------------------~~l~a~i~E~LR 307 (426)
T 3rwl_A 246 ATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP------------------ALVETMVPEIIR 307 (426)
T ss_dssp GGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HhHHHHHHHHHH
Confidence 66779999999999999999999999999999999999999999999995 389999999999
Q ss_pred cCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCC
Q 011093 359 LHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICP 438 (494)
Q Consensus 359 l~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 438 (494)
++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|||+||.. ..|+|||.|+|.|+
T Consensus 308 l~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~~l~FG~G~r~C~ 377 (426)
T 3rwl_A 308 WQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQHLSFGFGIHRCV 377 (426)
T ss_dssp HHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TCCSTTCCSTTSCS
T ss_pred hcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC---------CCccCCCCCCcCCc
Confidence 9999997 6799999999999999999999999999999999999999999999943 26899999999999
Q ss_pred ChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 439 GLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 439 G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
|++||.+|++++++.|+++| ++++.++
T Consensus 378 G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 405 (426)
T 3rwl_A 378 GNRLAEMQLRILWEEILTRFSRIEVMAE 405 (426)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred cHHHHHHHHHHHHHHHHHhCccCeeCCC
Confidence 99999999999999999999 9998754
No 70
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=6.7e-57 Score=428.73 Aligned_cols=367 Identities=19% Similarity=0.241 Sum_probs=285.9
Q ss_pred CCCCcccccccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCccc----ccccccCC
Q 011093 36 TPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPES----VGSIQKDE 111 (494)
Q Consensus 36 ~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~ 111 (494)
..+|.+++. ...+|+.+ . +.++||||+++.+|+.. ++|++++++++|+.++......+..... ........
T Consensus 22 ~~lp~~~~~--~~~~P~~~-~-~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (416)
T 3p3o_A 22 ADLPFLDFT--DPNFSWDS-P-EVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFM 96 (416)
T ss_dssp TTCCBCCTT--STTCCTTS-H-HHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHH
T ss_pred cCCCCCCcc--cccCCchH-H-HHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhh
Confidence 346655543 25678888 4 55679999999887666 9999999999999865322211100000 00000001
Q ss_pred CCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhH-HHHHHHHHHHHHHHhccc
Q 011093 112 YGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQ-AAFDTVVNLLSNSIFSVD 190 (494)
Q Consensus 112 ~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~-~~~~~~~~~~~~~~fG~~ 190 (494)
.+.++..+|+.|+++|+.++ +.|+++.++.+.+.+.+.++.+++.+ + + +++|+.. +...+++++++. +||.+
T Consensus 97 ~~~l~~~dg~~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~---~-g~~d~~~~~~~~~~~~vi~~-l~G~~ 169 (416)
T 3p3o_A 97 VDFLQSLDGADHRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-P---Q-GDFDFVQHFPHPLPALVMCQ-LLGFP 169 (416)
T ss_dssp HHSGGGCCHHHHHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-C---S-SSEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred cCccccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-c---c-CCccHHHHHHHHHHHHHHHH-HhCCC
Confidence 12456778999999999998 89999999999999999999999988 3 2 3599654 456699999998 58876
Q ss_pred ccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhH
Q 011093 191 LADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDM 270 (494)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~ 270 (494)
.... ..+.+....+.. .+... ......++..+..+.+.+++.+.+++++++ ...|+
T Consensus 170 ~~~~-----~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dl 225 (416)
T 3p3o_A 170 LEDY-----DTVGRLSIETNL---------GLALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE-------PGDDL 225 (416)
T ss_dssp GGGH-----HHHHHHHHTTCG---------GGTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSH
T ss_pred HHHH-----HHHHHHHHHHHh---------hcccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccH
Confidence 4321 333322221111 11110 112234556677778888888888777653 44589
Q ss_pred HHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHH
Q 011093 271 LDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQ 350 (494)
Q Consensus 271 ~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~ 350 (494)
++.|++...+..++++|+.+++..+++||+|||+++++|++++|++||++|+++++|++ |++
T Consensus 226 l~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~ 287 (416)
T 3p3o_A 226 TSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAP 287 (416)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHH
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHH
Confidence 99999876656899999999999999999999999999999999999999999999974 699
Q ss_pred HHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccC
Q 011093 351 TIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPF 430 (494)
Q Consensus 351 a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~F 430 (494)
+||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|||+||.. ..|+||
T Consensus 288 a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------~~~l~F 358 (416)
T 3p3o_A 288 QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------APSIAF 358 (416)
T ss_dssp HHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------SCCCTT
T ss_pred HHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------CCeecC
Confidence 99999999999996678899999999999999999999999999999999999999999999842 258999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHhhhce-eecCCC
Q 011093 431 GAGRRICPGLPLAIRMLYLMLGSLIKSFD-WKLDNE 465 (494)
Q Consensus 431 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~ 465 (494)
|.|+|.|+|++||.+|++++++.|+++|+ +++.++
T Consensus 359 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 394 (416)
T 3p3o_A 359 GGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE 394 (416)
T ss_dssp CCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC
T ss_pred CCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 99999999999999999999999999995 888654
No 71
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=3.4e-56 Score=420.76 Aligned_cols=355 Identities=19% Similarity=0.247 Sum_probs=280.8
Q ss_pred CCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHHH
Q 011093 48 GHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLR 127 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R 127 (494)
..+|+.++.+++++ |||+++..| .++|++++.+++++.+. .|...+.......... +.+.++..+|+.|+++|
T Consensus 19 ~~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~-~~~~l~~~dg~~h~~~R 91 (394)
T 2wiy_A 19 RNNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAV-ASDTALGSDPPHHTVLR 91 (394)
T ss_dssp HHCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGG-GGGSGGGCCTTHHHHHH
T ss_pred ccCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchh-cccccccCCchHHHHHH
Confidence 35789999888664 899987654 58999999999999643 2332211110111111 11235677899999999
Q ss_pred HHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhcccccccCcchHHHHHHHHH
Q 011093 128 KICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAAFDTVVNLLSNSIFSVDLADANSDSAREFKDSMW 207 (494)
Q Consensus 128 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~ 207 (494)
+.+. +.|+++.++.+.+.+++.++.+++.+. .++++|+...+..+++++++..+||.+... ...+.+...
T Consensus 92 ~~~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~-----~~~~~~~~~ 161 (394)
T 2wiy_A 92 RQTN-KWFTPKLVDGWVRTTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPEDD-----ADAVMEAMF 161 (394)
T ss_dssp HHHH-TTCSHHHHHHHTHHHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC-----HHHHHHHHH
T ss_pred HHHH-hccCHHHHHHHHHHHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH-----HHHHHHHHH
Confidence 9998 999999999999999999999888764 456899999999999999999999986432 234444332
Q ss_pred HHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccCCCCCHHH
Q 011093 208 GLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISESEEIDRND 287 (494)
Q Consensus 208 ~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~ls~~e 287 (494)
..... ....|.. ....+..+....+.+++.+.+++++++ ...|+++.|++...+..++++|
T Consensus 162 ~~~~~------~~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~Ll~~~~~~~ls~~e 222 (394)
T 2wiy_A 162 EAMLM------QSAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVN-------PGDGLADSLLDAARAGEITESE 222 (394)
T ss_dssp HHHGG------GSSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHHHTTSSCHHH
T ss_pred HHHHh------ccCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcC-------CCCcHHHHHHHhhhcCCCCHHH
Confidence 22110 0011211 112334455566777777777766532 3348999999876556799999
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCCCcC
Q 011093 288 IKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVPLLL 367 (494)
Q Consensus 288 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~ 367 (494)
+.+++..+++||+|||+++++|++++|++||++|+++++|+ .|+++||+|+||++|+++. +
T Consensus 223 l~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~LRl~pp~~~-~ 283 (394)
T 2wiy_A 223 AIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE------------------SARAAIINEMVRMDPPQLS-F 283 (394)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCE-E
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHhhCCCccC-e
Confidence 99999999999999999999999999999999999999986 3689999999999999985 6
Q ss_pred ccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHH
Q 011093 368 PRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRML 447 (494)
Q Consensus 368 ~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~ 447 (494)
+|.+++|++++||.||+|+.|.++.+++||||++|+||++|||+||++. ..|+|||.|+|.|+|++||.+|+
T Consensus 284 ~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~r~C~G~~lA~~e~ 355 (394)
T 2wiy_A 284 LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGPHSCAGQIISRAEA 355 (394)
T ss_dssp EEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGGGSCTTHHHHHHHH
T ss_pred eEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC--------CCccCCCCCCCcCCcHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999742 25899999999999999999999
Q ss_pred HHHHHHHhhhce-eecCCC
Q 011093 448 YLMLGSLIKSFD-WKLDNE 465 (494)
Q Consensus 448 ~~~l~~ll~~f~-~~~~~~ 465 (494)
+++++.|+++|+ +++.++
T Consensus 356 ~~~l~~ll~~~~~~~l~~~ 374 (394)
T 2wiy_A 356 TTVFAVLAERYERIELAEE 374 (394)
T ss_dssp HHHHHHHHHHCSCEEESSC
T ss_pred HHHHHHHHHhCCCceECCC
Confidence 999999999998 898653
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=4.7e-56 Score=415.66 Aligned_cols=333 Identities=21% Similarity=0.272 Sum_probs=265.8
Q ss_pred CcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCC-cc-cc-----c-ccccC--CCCcccccCC
Q 011093 51 PHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNV-PE-SV-----G-SIQKD--EYGIPWLPVS 120 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~~-~~-----~-~~~~~--~~~~~~~~~~ 120 (494)
|+..+.++ ++||||+++. | .++|++|+++++++.+. ..|.+++. .. .. . .+... +.+ ++..+|
T Consensus 1 p~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg 73 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYT-MLTSDP 73 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSS-GGGCCT
T ss_pred CCHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccc-cccCCc
Confidence 45677777 4799999988 4 78999999999999865 35665532 11 11 1 11100 133 455679
Q ss_pred hhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchH
Q 011093 121 TKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSA 199 (494)
Q Consensus 121 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~ 199 (494)
+.|+++|+.++ +.|+++.++. +.+++.++.+++.+. | ++|+.+.+ ..+++++++. +||.+ +. .
T Consensus 74 ~~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~--~--- 137 (367)
T 3b4x_A 74 PLHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-PD--V--- 137 (367)
T ss_dssp THHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC--H---
T ss_pred hhHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc--H---
Confidence 99999999998 8899999888 888899998888774 3 49998655 7999999999 79988 32 2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcccc
Q 011093 200 REFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISE 279 (494)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~ 279 (494)
..+.+....+..... ..|.. .+.. +..+.+.+++.+.+++++++ ...|+++.|++.
T Consensus 138 ~~~~~~~~~~~~~~~------~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~-- 193 (367)
T 3b4x_A 138 KKVKDWSDLVALRLG------RADEI--------FSIG-RKYLELISFSKKELDSRKGK-------EIVDLTGKIANS-- 193 (367)
T ss_dssp HHHHHHHHHHHTTTT------STTGG--------GCCC-HHHHHHHHHHHHHHHHHTTT-------CCSSHHHHHHTS--
T ss_pred HHHHHHHHHHHhccC------CChhh--------HHHH-HHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhc--
Confidence 344444433322111 12211 1112 45566777777777665432 345899999976
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhc
Q 011093 280 SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRL 359 (494)
Q Consensus 280 ~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl 359 (494)
.++++|+.+++..+++||+|||+++++|++++|++ |++|+++++|++ +|||+|+||+
T Consensus 194 --~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~E~lRl 250 (367)
T 3b4x_A 194 --NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAVEEALRF 250 (367)
T ss_dssp --SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHHHHHHHh
Confidence 69999999999999999999999999999999999 999999999953 8999999999
Q ss_pred CCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCC
Q 011093 360 HPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPG 439 (494)
Q Consensus 360 ~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G 439 (494)
+|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||. ..++|||.|+|.|+|
T Consensus 251 ~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G 319 (367)
T 3b4x_A 251 SPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------NPHLSFGSGIHLCLG 319 (367)
T ss_dssp SCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTSCTT
T ss_pred cCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------CCCcCCCCCCccCcc
Confidence 99999 5789999999999999999999999999999999999999999999984 158999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhc-eeecCC
Q 011093 440 LPLAIRMLYLMLGSLIKSF-DWKLDN 464 (494)
Q Consensus 440 ~~~a~~~~~~~l~~ll~~f-~~~~~~ 464 (494)
++||.+|++++++.|+++| ++++.+
T Consensus 320 ~~lA~~e~~~~l~~ll~~f~~~~l~~ 345 (367)
T 3b4x_A 320 APLARLEARIALEEFAKKFRVKEIVK 345 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCceeCC
Confidence 9999999999999999999 799864
No 73
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=1.6e-55 Score=408.67 Aligned_cols=319 Identities=21% Similarity=0.225 Sum_probs=254.7
Q ss_pred HhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHHHHHhhhccCChhH
Q 011093 60 KVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQK 139 (494)
Q Consensus 60 ~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~ 139 (494)
++||||+++ | +++|+||+++++++.++ ..|.+++...... ..+.+ ++..+|+.|+++|+.+. +.|++..
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~---~~~~~-l~~~~g~~~~~~R~~~~-~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN---AGGIS-FITMDNPEHKEFRDISA-PYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCG-GGGCCHHHHHHHHHHHH-HHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC---ccccc-cccCCchHHHHHHHHhh-hhcCHHH
Confidence 589999986 3 89999999999999865 3566654211111 11333 45568999999999998 8999999
Q ss_pred HhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCc
Q 011093 140 LDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNL 218 (494)
Q Consensus 140 l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (494)
++.+.+.+.+.++.+++.+. ++|+.+.+ ..+++++++.+ ||.+.+. ..++.+....+.. .
T Consensus 71 l~~~~~~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~-----~~~~~~~~~~~~~---~--- 131 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSD-----MPLFKLWSDYIIG---N--- 131 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGG-----HHHHHHHHHHHHT---S---
T ss_pred HHHHHHHHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHH-----HHHHHHHHHHHhh---c---
Confidence 99999999999999988764 68988765 89999999998 9987642 1344444333321 0
Q ss_pred cccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-CCCCHHHHHHHHHHHHH
Q 011093 219 SDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-EEIDRNDIKFVILDLFA 297 (494)
Q Consensus 219 ~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls~~ei~~~~~~~~~ 297 (494)
..|.+ .. .++. +..+.+.+++.+.+ ..| ++.|++...+ ..++++++.+++..+++
T Consensus 132 --~~p~~-----~~-~~~~-~~~~~~~~~~~~~i--------------~~d-l~~ll~~~~~~~~l~~~ei~~~~~~~~~ 187 (343)
T 2rfb_A 132 --KRDEN-----FN-YVNN-RMVSRLLEIFKSDS--------------HGI-INVLAGSSLKNRKLTMDEKIKYIMLLII 187 (343)
T ss_dssp --CCSSH-----HH-HHHH-HHHHHHHHHHHSCC--------------SSH-HHHHHTCBCSSSBCCHHHHHHHHHHHHH
T ss_pred --cCcch-----hh-HHHH-HHHHHHHHHHHHHH--------------hcc-HHHHHhhhcCCCCCCHHHHHHHHHHHHH
Confidence 11221 01 1122 33334444333332 237 8889876543 46999999999999999
Q ss_pred hcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCC-CCcCcccccccee
Q 011093 298 AGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPV-PLLLPRKASADVE 376 (494)
Q Consensus 298 ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~-~~~~~R~~~~~~~ 376 (494)
||+|||+++++|++++|++||++|+++++|+ +|||+|+||++|++ + .++|.+.+|++
T Consensus 188 AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~-~~~R~~~~d~~ 245 (343)
T 2rfb_A 188 GGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQF-LPHRFAAEDSY 245 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCC-BCCCEESSCEE
T ss_pred HhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccc-ccceEECCCeE
Confidence 9999999999999999999999999999995 89999999999999 8 57899999999
Q ss_pred eccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhh
Q 011093 377 ITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIK 456 (494)
Q Consensus 377 ~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~ 456 (494)
++||.||||+.|.++.+++||||++|+||++|+|+|+ ..++|||.|+|.|+|++||.+|++++++.|++
T Consensus 246 ~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~ 314 (343)
T 2rfb_A 246 INNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLEASIALNDILN 314 (343)
T ss_dssp ETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred ECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------CCCccCCCCCccCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999994 15899999999999999999999999999999
Q ss_pred hce-eecCCC
Q 011093 457 SFD-WKLDNE 465 (494)
Q Consensus 457 ~f~-~~~~~~ 465 (494)
+|+ +++.++
T Consensus 315 ~f~~~~~~~~ 324 (343)
T 2rfb_A 315 HFKRIKIDYK 324 (343)
T ss_dssp HCSCCCBCTT
T ss_pred hCCCceeCCC
Confidence 996 998763
No 74
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=2.2e-55 Score=411.88 Aligned_cols=333 Identities=20% Similarity=0.290 Sum_probs=264.6
Q ss_pred CcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCC-----cccc--cc--ccc-CCCCcccccCC
Q 011093 51 PHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNV-----PESV--GS--IQK-DEYGIPWLPVS 120 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~~~~~~~~ 120 (494)
|+..+.++ ++||||+++ | +.++|+|++++++++.++ ..|.+++. .... .. +.. .+. .++..+|
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRY-TMLTSDP 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGS-SGGGCCT
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-cccccccccccccccccccccccccccccc-ccccCCC
Confidence 45677888 599999987 4 578999999999999864 35666543 1100 01 110 112 3456689
Q ss_pred hhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchH
Q 011093 121 TKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSA 199 (494)
Q Consensus 121 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~ 199 (494)
+.|+++|+.+. +.|++..++.+.+.+.+.++.+++.+ + ++ ++|+.+.+ ..+++++++.+ ||.+++..
T Consensus 74 ~~h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~---~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~----- 141 (368)
T 1io7_A 74 PLHDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-D---PR-EDDIVKKLAVPLPIIVISKI-LGLPIEDK----- 141 (368)
T ss_dssp THHHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-C---TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH-----
T ss_pred hHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-h---cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH-----
Confidence 99999999998 89999999999999999999999988 4 23 79998866 78999999998 99876431
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhcccc
Q 011093 200 REFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISE 279 (494)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~ 279 (494)
..+.+....+ .. ... .|. ..++..+..+.+.+++.+.+ + ...|+++.|++.
T Consensus 142 ~~~~~~~~~~----~~--~~~-~p~--------~~~~~~~~~~~~~~~~~~~i-------~-----~~~d~l~~ll~~-- 192 (368)
T 1io7_A 142 EKFKEWSDLV----AF--RLG-KPG--------EIFELGKKYLELIGYVKDHL-------N-----SGTEVVSRVVNS-- 192 (368)
T ss_dssp HHHHHHGGGC----TT--SCC-CTT--------CHHHHHHHHHHHHHHHHHHT-------T-----SSCHHHHHHHTS--
T ss_pred HHHHHHHHHH----Hh--ccC-ChH--------HHHHHHHHHHHHHHHHHHHh-------C-----CCCCHHHHHHhc--
Confidence 2232221111 00 000 121 11234444555555555554 1 345899999975
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhc
Q 011093 280 SEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRL 359 (494)
Q Consensus 280 ~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl 359 (494)
.++++++.+++..+++||+|||+++++|++++|++|| +|+++++| + |++|||+|+||+
T Consensus 193 --~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~i~E~lRl 250 (368)
T 1io7_A 193 --NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------------LYLKAIEEALRY 250 (368)
T ss_dssp --SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T------------------CHHHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c------------------hHHHHHHHHHHh
Confidence 6899999999999999999999999999999999999 99999999 2 699999999999
Q ss_pred CCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCC
Q 011093 360 HPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPG 439 (494)
Q Consensus 360 ~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G 439 (494)
+|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+|+ + ..++|||.|+|.|+|
T Consensus 251 ~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~--------~~~~~FG~G~r~C~G 319 (368)
T 1io7_A 251 SPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN--P--------NPHLSFGSGIHLCLG 319 (368)
T ss_dssp SCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC--S--------CCCCTTCCGGGSCTT
T ss_pred Ccccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC--C--------CCCcCCCCCccCCCC
Confidence 99999 578999999999999999999999999999999999999999999993 1 258999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhce-eecCC
Q 011093 440 LPLAIRMLYLMLGSLIKSFD-WKLDN 464 (494)
Q Consensus 440 ~~~a~~~~~~~l~~ll~~f~-~~~~~ 464 (494)
++||.+|++++++.|+++|+ +++.+
T Consensus 320 ~~lA~~e~~~~l~~ll~~f~~~~~~~ 345 (368)
T 1io7_A 320 APLARLEARIAIEEFSKRFRHIEILD 345 (368)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEecC
Confidence 99999999999999999996 98864
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=3e-54 Score=409.30 Aligned_cols=365 Identities=17% Similarity=0.252 Sum_probs=267.6
Q ss_pred CCCCCcccc---cccCCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc---cccccc
Q 011093 35 PTPLPIIGN---LLELGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE---SVGSIQ 108 (494)
Q Consensus 35 p~~~p~lG~---~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~---~~~~~~ 108 (494)
+.++|.+|- ..++..||+.+++++++ +|||+++ ++..+++|++++++++++.+.. .|+...... ......
T Consensus 17 ~~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~ 92 (412)
T 4dnj_A 17 GAGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKP 92 (412)
T ss_dssp STTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCC
T ss_pred CCCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCcccccccccccc
Confidence 345777762 23345789999998864 7999865 5556899999999999997543 333222111 111111
Q ss_pred cCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceeh-hHHHHHHHHHHHHHHHh
Q 011093 109 KDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDV-GQAAFDTVVNLLSNSIF 187 (494)
Q Consensus 109 ~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~-~~~~~~~~~~~~~~~~f 187 (494)
....+.++..+|+.|+++|++++ +.|+++.++.+.+.+.+.++++++.+.. .++++|+ .++...++.++++..+
T Consensus 93 ~~~~~~~~~~Dg~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~---~~~~~D~v~~~~~~~~~~~i~~l~- 167 (412)
T 4dnj_A 93 WRPPSLILEADPPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLA---RGGNIDAIADLAEAYPLSVFPDAM- 167 (412)
T ss_dssp SSCCCTTTTCCTTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHH---TTSEEETCCCCCCHHHHHHHHHHH-
T ss_pred ccCCCccccCChHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhc---cCCCceeHHHHHhhhhHhHHHHHc-
Confidence 11234567788999999999998 8999999999999999999999998864 4567775 5566677778777654
Q ss_pred cccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 011093 188 SVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADS 267 (494)
Q Consensus 188 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 267 (494)
|...... .....+... +...... ........ ......+...+.+..+..+ ..
T Consensus 168 g~~~~~~--~~~~~~~~~---~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~-----~~ 219 (412)
T 4dnj_A 168 GLKQEGR--ENLLPYAGL---VFNAFGP--------------PNELRQSA----IERSAPHQAYVAEQCQRPN-----LA 219 (412)
T ss_dssp TCCSTTG--GGHHHHHHH---HHHHTSC--------------SSHHHHHH----HHTCHHHHHHHHHHTSGGG-----SC
T ss_pred CCchhhh--hhhhhhhhc---ccccccc--------------cHHHHHHH----HHHHHHHHHHHHHHHHhhc-----cc
Confidence 4443222 122333222 2221111 00001111 1111222223333322221 12
Q ss_pred hhHHHHHhcc-ccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCC
Q 011093 268 KDMLDTLLNI-SESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQL 346 (494)
Q Consensus 268 ~d~~~~ll~~-~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l 346 (494)
.+.+..++.. .+..+++++|+.+++..+++||+|||+++++|++++|++||++|++|++|.
T Consensus 220 ~~~~~~l~~~~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~------------------ 281 (412)
T 4dnj_A 220 PGGFGACIHAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP------------------ 281 (412)
T ss_dssp TTSHHHHHHHTTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------
T ss_pred cccchhhhHhhhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc------------------
Confidence 2344444444 444779999999999999999999999999999999999999999999873
Q ss_pred hhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccc
Q 011093 347 PYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFE 426 (494)
Q Consensus 347 ~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~ 426 (494)
.++.++++|++|++|+++. ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|||+||.. .
T Consensus 282 ~~~~~~~eE~lR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~~----------~ 350 (412)
T 4dnj_A 282 SLARNAFEEAVRFESPVQT-FFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTS----------G 350 (412)
T ss_dssp GGHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCT----------T
T ss_pred cccccccceeeeecCCccc-ccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCCC----------C
Confidence 4688999999999999987 6799999999999999999999999999999999999999999999832 5
Q ss_pred cccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 427 LIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 427 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
|+|||.|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus 351 ~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~ 390 (412)
T 4dnj_A 351 HVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP 390 (412)
T ss_dssp CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC
T ss_pred CCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC
Confidence 89999999999999999999999999999999 8998653
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=9.9e-49 Score=370.34 Aligned_cols=354 Identities=16% Similarity=0.189 Sum_probs=260.8
Q ss_pred CCCCcHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcccccccccCCCCcccccCChhHHHH
Q 011093 48 GHKPHKSLAELAKVHG-PIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPESVGSIQKDEYGIPWLPVSTKWKKL 126 (494)
Q Consensus 48 ~~~~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 126 (494)
..+++..+.+++++.+ +++....+| ..++|++++++++++++. ..|+......... ........+...+++.|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCcccccc-cccccccCcccCCcHHHHHH
Confidence 3567788888876654 455544443 478899999999999753 3454332211111 11112334556789999999
Q ss_pred HHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhcccccccCcchHHHHHHH
Q 011093 127 RKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDTVVNLLSNSIFSVDLADANSDSAREFKDS 205 (494)
Q Consensus 127 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~ 205 (494)
|++++ +.|+++.++.+.+.+++.++++++.+.+ ++++|+...+ ..+...+++ .++|..... ...+.+.
T Consensus 113 Rrll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~-~llg~~~~d-----~~~~~~~ 181 (417)
T 4dxy_A 113 RKALD-KGLNLAKIRKVEDKVREVASSLIDSFAA----RGECDFAAEYAELFPVHVFM-ALADLPLED-----IPVLSEY 181 (417)
T ss_dssp HHHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHT----TSEEEHHHHTTTTHHHHHHH-HHTTCCGGG-----HHHHHHH
T ss_pred HHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhh----cCCeeeHHHHHhhhHHHHHH-HHcCCCHHH-----HHHHHhh
Confidence 99998 8999999999999999999999998864 4578865554 444555554 566765432 2333333
Q ss_pred HHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhccccC-CCCC
Q 011093 206 MWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLEQRQEHGFADSKDMLDTLLNISES-EEID 284 (494)
Q Consensus 206 ~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~ls 284 (494)
...+.. . . ............+..+.+..++.++++++++. ...|+++.|+....+ ..++
T Consensus 182 ~~~~~~---~------~----~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~-------~~ddl~s~L~~~~~~~~~~~ 241 (417)
T 4dxy_A 182 ARQMTR---P------E----GNTPEEMATDLEAGNNGFYAYVDPIIRARVGG-------DGDDLITLMVNSEINGERIA 241 (417)
T ss_dssp HHHHHS---C------C----CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTCEETTEECC
T ss_pred hhhhcc---c------c----ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CccchhhhhccccccCCccc
Confidence 332211 0 0 00012223344455566666666666554321 456899999987654 6699
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCCCCccccCCChhHHHHHHHHhhcCCCCC
Q 011093 285 RNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETLRLHPPVP 364 (494)
Q Consensus 285 ~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~ 364 (494)
++++.+++..+++||+|||+++++|++++|++||++++++++|...+ ..++.|.+| +++.+
T Consensus 242 ~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~avee~~~-~~~~~ 302 (417)
T 4dxy_A 242 HDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGAEEMFR-RFPVV 302 (417)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HHTHHHHHH-HSCCB
T ss_pred hhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------ccceeeeec-ccccc
Confidence 99999999999999999999999999999999999999999997643 223344444 44444
Q ss_pred CcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCCCCCCCCccccccCCCCCCCCCChHHHH
Q 011093 365 LLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSDVDVKGRNFELIPFGAGRRICPGLPLAI 444 (494)
Q Consensus 365 ~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~ 444 (494)
. +.|.+++|++++|+.||+|+.|.++.+++||||++|+||++|||+|+ ...|+|||.|+|.|+|++||+
T Consensus 303 ~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~----------~~~~l~FG~G~r~ClG~~LA~ 371 (417)
T 4dxy_A 303 S-EARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR----------SISHSTFGGGPHRCAGMHLAR 371 (417)
T ss_dssp E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHH
T ss_pred c-cccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC----------CCCCCCcCCCcccCccHHHHH
Confidence 3 56999999999999999999999999999999999999999999994 125899999999999999999
Q ss_pred HHHHHHHHHHhhhc-eeecCCC
Q 011093 445 RMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 445 ~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
+|++++++.|+++| ++++.++
T Consensus 372 ~E~~i~l~~Ll~rfp~~~l~~~ 393 (417)
T 4dxy_A 372 MEVIVTLEEWLKRIPEFSFKEG 393 (417)
T ss_dssp HHHHHHHHHHHHHCSSCEECTT
T ss_pred HHHHHHHHHHHHhCCCceeCCC
Confidence 99999999999999 9998765
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=9.6e-47 Score=348.31 Aligned_cols=313 Identities=17% Similarity=0.116 Sum_probs=214.1
Q ss_pred CCCC-CCCCCccccccc-----CCCCCcHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCcccCCCCCcc-c
Q 011093 31 LPPG-PTPLPIIGNLLE-----LGHKPHKSLAELAKVHGPIMSLKFGQVTTVVISSATMAKQVLQDHDKSLCNRNVPE-S 103 (494)
Q Consensus 31 ~pp~-p~~~p~lG~~~~-----~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~ 103 (494)
+||| +.++|++|+... +..+|+.++.+++++ ||+++. ...++|++++.+++|+.+. .|.+..... .
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 4566 335799997643 456899999999876 999865 3579999999999999863 454432211 0
Q ss_pred c-----cccccCCCCcccccCChhHHHHHHHhhhccCChhHHhhcHHHHHHHHHHHHHHHHHhccCCCceehhHHH-HHH
Q 011093 104 V-----GSIQKDEYGIPWLPVSTKWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVTFVQESCRTGEPIDVGQAA-FDT 177 (494)
Q Consensus 104 ~-----~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~ 177 (494)
. ......+.+ +...+|+.| . +.|+ . .+.+++.++++++.+. +++|+...+ ..+
T Consensus 108 ~~~~~~~~~~~~~~~-l~~~dg~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~------g~~Dl~~~~a~~l 166 (381)
T 2yjn_B 108 WMRAAGAPPAEWAQP-FRDVHAASW-------E-GEVP-----D-VGELAESFAGLLPGAG------ARLDLVGDFAWQV 166 (381)
T ss_dssp HHHHHTCCHHHHTHH-HHHHHHCCC-------C-SCCC-----C-CSCHHHHTSTTSCC------------CCCCCCTHH
T ss_pred cccccccccchhhhh-hhhCCchhh-------h-hccC-----C-hHHHHHHHHHHHHhcc------CcchHHHHHHHHH
Confidence 0 000000122 334557777 3 7787 3 6677778888887764 368888655 699
Q ss_pred HHHHHHHHHhcccccccCcchHHHHHHHHHHHHHHhcCCCccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011093 178 VVNLLSNSIFSVDLADANSDSAREFKDSMWGLMVEAGRPNLSDFFPMLRKLDIQGVRRRLTRHYIKILEVLDRFIDQRLE 257 (494)
Q Consensus 178 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 257 (494)
++++++.. ||.+.+.. ++.+.+...... + +... ...+. .
T Consensus 167 ~~~vi~~l-~G~~~~~~------~~~~~~~~~~~~----------~----~~~~----~~~~~----~------------ 205 (381)
T 2yjn_B 167 PVQGMTAV-LGAAGVLR------GAAWDARVSLDA----------Q----LSPQ----QLAVT----E------------ 205 (381)
T ss_dssp HHHHHHTC------CCH------HHHHHHTTHHHH----------T----TSCC----CHHHH----H------------
T ss_pred HHHHHHHH-cCCCHHHH------HHHHHHHHhccC----------C----CCHH----HHHHH----H------------
Confidence 99999994 99876431 222222111100 0 0000 00000 0
Q ss_pred HHhhcCCCCchhHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHhhCCCCC
Q 011093 258 QRQEHGFADSKDMLDTLLNISESEEIDRNDIKFVILDLFAAGTETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNL 337 (494)
Q Consensus 258 ~~~~~~~~~~~d~~~~ll~~~~~~~ls~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~ 337 (494)
+.++.+++ ++++.+++||+|||+++++|++++|++||++++++++|++
T Consensus 206 -----------~~~~~l~~-------------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------- 253 (381)
T 2yjn_B 206 -----------AAVAALPA-------------DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA-------- 253 (381)
T ss_dssp -----------HHHHHCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--------
T ss_pred -----------HHHHHHHH-------------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH--------
Confidence 01111111 6788899999999999999999999999999999999863
Q ss_pred CCccccCCChhHHHHHHHHhhcCCCCCCcCccccccceeeccEEeCCCCEEEechhhhccCCCCCCCCCCCCCCCccCCC
Q 011093 338 IEESDITQLPYLQTIVKETLRLHPPVPLLLPRKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFKPERFLGSD 417 (494)
Q Consensus 338 ~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~ 417 (494)
|++++|+|+||++|+++. ++|.+++|++++|+.||+|+.|.++.+++||||++|+||++|||+||++
T Consensus 254 ----------~l~~~i~E~LR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~-- 320 (381)
T 2yjn_B 254 ----------AAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA-- 320 (381)
T ss_dssp ------------HHHHHHHHHHSCSCSE-EEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC--
T ss_pred ----------HHHHHhCeeeeecCCCcc-eeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC--
Confidence 799999999999999996 6799999999999999999999999999999999999999999999964
Q ss_pred CCCCCCccccccCCCCCCCCCChHHHHHHHHHHHHHHhhhc-eeecCCC
Q 011093 418 VDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLIKSF-DWKLDNE 465 (494)
Q Consensus 418 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~ 465 (494)
..++|||.| |.|+|++||.+|++++++.|+++| ++++.++
T Consensus 321 -------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~ 361 (381)
T 2yjn_B 321 -------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP 361 (381)
T ss_dssp -------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred -------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence 268999999 999999999999999999999999 9998764
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=58.63 E-value=33 Score=24.10 Aligned_cols=50 Identities=16% Similarity=0.238 Sum_probs=36.3
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHhc
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG--------QVTTVVISSATMAKQVLQDH 91 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g--------~~~~v~v~dp~~~~~i~~~~ 91 (494)
++|++.. .-..+.+.++..+||+|..+.+. |.-+|...+++.++.++..+
T Consensus 15 fV~~Lp~--~~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~ 72 (103)
T 1s79_A 15 YIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 72 (103)
T ss_dssp EEECCCT--TCCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSS
T ss_pred EEECCCC--CCCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcC
Confidence 4566542 23457888999999999887652 44567788999999988643
No 79
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=56.71 E-value=34 Score=21.89 Aligned_cols=42 Identities=12% Similarity=0.248 Sum_probs=31.9
Q ss_pred CcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcC
Q 011093 51 PHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDHD 92 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~~ 92 (494)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..++
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 357788899999999887752 234677889999999886543
No 80
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=53.81 E-value=43 Score=21.86 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=31.0
Q ss_pred cHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 011093 52 HKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 52 ~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~ 90 (494)
.+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 21 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 21 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 37788899999999888764 4456778899999988863
No 81
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.95 E-value=54 Score=22.74 Aligned_cols=60 Identities=13% Similarity=0.197 Sum_probs=40.6
Q ss_pred cccccccCCC--CCcHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHh-cCcccCCCCC
Q 011093 40 IIGNLLELGH--KPHKSLAELAKVHG-PIMSLKFGQVTTVVISSATMAKQVLQD-HDKSLCNRNV 100 (494)
Q Consensus 40 ~lG~~~~~~~--~~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~-~~~~~~~~~~ 100 (494)
+++|+..-.+ .....+.++..+|| +|..+ .+|.-+|...+.+.++..+.. ++..+..++.
T Consensus 13 YV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i 76 (96)
T 2diu_A 13 YVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRI 76 (96)
T ss_dssp EEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCC
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceE
Confidence 4777654321 11234778999995 99988 568889999999999888864 4444444443
No 82
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=51.53 E-value=62 Score=22.93 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=41.1
Q ss_pred CCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEec------CCeeEEEeCCHHHHHHHHHh
Q 011093 31 LPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKF------GQVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 31 ~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~------g~~~~v~v~dp~~~~~i~~~ 90 (494)
.||.|...=++|++.. .-..+.+.++..+||+|..+.+ -|.-+|-..+++.+...+..
T Consensus 3 ~~~~~~~~l~V~nlp~--~~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPY--KITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CCTTCCSEEEEESCCT--TCCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 4555555557787653 2345678899999999988876 13457778899988888763
No 83
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=47.06 E-value=47 Score=22.38 Aligned_cols=53 Identities=11% Similarity=0.145 Sum_probs=36.5
Q ss_pred CCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecC----CeeEEEeCCHHHHHHH
Q 011093 33 PGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG----QVTTVVISSATMAKQV 87 (494)
Q Consensus 33 p~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g----~~~~v~v~dp~~~~~i 87 (494)
+-|+.-=++|++.. .-..+.++++..+||+|..+.+. |.-+|-..+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~--~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTE--DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCT--TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCC--CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 33344446777653 23457889999999999888864 4567888999998853
No 84
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=43.61 E-value=61 Score=20.59 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=30.7
Q ss_pred CcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhc
Q 011093 51 PHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDH 91 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~ 91 (494)
..+.+.++..+||+|..+.+. |.-+|-..+++.++.++.-+
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 61 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIH 61 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSS
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCC
Confidence 356788899999998887652 23457778999998887533
No 85
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=40.24 E-value=91 Score=21.64 Aligned_cols=53 Identities=11% Similarity=0.186 Sum_probs=37.7
Q ss_pred CCcccccccCCCC----CcHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 011093 38 LPIIGNLLELGHK----PHKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 38 ~p~lG~~~~~~~~----~~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~ 90 (494)
.=++|++..-..+ ..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 3467777642222 246788999999999888764 4456778888888888764
No 86
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=39.10 E-value=97 Score=21.61 Aligned_cols=50 Identities=8% Similarity=0.064 Sum_probs=37.5
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC--CeeEEEeCCHHHHHHHHHh
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG--QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g--~~~~v~v~dp~~~~~i~~~ 90 (494)
=++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 35677652 23467889999999998887653 5667888899999988874
No 87
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=36.89 E-value=97 Score=21.99 Aligned_cols=58 Identities=7% Similarity=0.063 Sum_probs=40.0
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC--CeeEEEeCCHHHHHHHHHh-cCcccCC
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG--QVTTVVISSATMAKQVLQD-HDKSLCN 97 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g--~~~~v~v~dp~~~~~i~~~-~~~~~~~ 97 (494)
-=++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+..
T Consensus 18 ~l~V~nLp~--~~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 18 RVVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp CEEEEECCS--SCCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 335677653 22356788899999999887753 5567788899999888864 3433433
No 88
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.63 E-value=99 Score=20.71 Aligned_cols=58 Identities=19% Similarity=0.159 Sum_probs=39.2
Q ss_pred CCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 31 LPPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 31 ~pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
..|.|...=++|++.. .-..+.+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 10 ~~~~~~~~l~v~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 10 ANPDPNCCLGVFGLSL--YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CSCCGGGCEEEESCCS--SCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCC--CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3344444456777653 23457889999999998887652 1235677899999988864
No 89
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=33.76 E-value=35 Score=16.00 Aligned_cols=12 Identities=42% Similarity=0.410 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHH
Q 011093 319 EALSKARLELEQ 330 (494)
Q Consensus 319 ~~~~~l~~Ei~~ 330 (494)
.+|.++|.|+.+
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578899999865
No 90
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=30.60 E-value=78 Score=20.85 Aligned_cols=51 Identities=16% Similarity=0.264 Sum_probs=35.7
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhc
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDH 91 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~ 91 (494)
=++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+...
T Consensus 14 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 14 MFVGGLSW--DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEECCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 35677653 23457888999999998877652 12456778999999888643
No 91
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.22 E-value=1.3e+02 Score=20.35 Aligned_cols=49 Identities=14% Similarity=0.098 Sum_probs=36.6
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---~~~~v~v~dp~~~~~i~~~ 90 (494)
-=++|++ .-..+.+.++..+||+|..+.++ +.-+|-..+++.+...+..
T Consensus 17 ~l~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 17 TLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3456773 23457889999999999888764 4556778899999988864
No 92
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=29.26 E-value=1.2e+02 Score=21.51 Aligned_cols=49 Identities=22% Similarity=0.230 Sum_probs=36.0
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. |.=+|-..+++.++..+..
T Consensus 9 fV~nLp~--~~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 9 FIKNLDK--SIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEESCCT--TCCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCC--CCCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 5677653 22357889999999999877652 2346888999999998864
No 93
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.14 E-value=1.6e+02 Score=20.70 Aligned_cols=57 Identities=11% Similarity=0.069 Sum_probs=38.7
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh-cCcccCCC
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---QVTTVVISSATMAKQVLQD-HDKSLCNR 98 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---~~~~v~v~dp~~~~~i~~~-~~~~~~~~ 98 (494)
++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+..+
T Consensus 14 ~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 14 LAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 4555542 23457889999999999888763 3456778899998888764 34444433
No 94
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=27.52 E-value=1.4e+02 Score=20.21 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=31.2
Q ss_pred CcHHHHHHHHhhCCceEEec----CCeeEEEeCCHHHHHHHHHh
Q 011093 51 PHKSLAELAKVHGPIMSLKF----GQVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~----g~~~~v~v~dp~~~~~i~~~ 90 (494)
..+.+.++..+||+|..+.+ -+.-+|-..+++.+...+..
T Consensus 13 t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 13 GKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp SHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 45778899999999877765 34557778999999988863
No 95
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=26.93 E-value=1.9e+02 Score=22.42 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=35.8
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC-----CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-----QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-----~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.++++..+||+|-++++. +.-+|-..|++.+......
T Consensus 50 ~VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 4677642 23457899999999999887762 3457778899988888764
No 96
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.48 E-value=1.4e+02 Score=20.17 Aligned_cols=49 Identities=20% Similarity=0.180 Sum_probs=35.6
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC------------CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG------------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g------------~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 9 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 9 FIKNLNF--STTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 5666642 23457889999999998777653 2346778899999999874
No 97
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=26.13 E-value=1.5e+02 Score=20.28 Aligned_cols=49 Identities=20% Similarity=0.180 Sum_probs=34.5
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC-----C----eeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-----Q----VTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-----~----~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. + .-+|-..+++.++..+..
T Consensus 23 fV~nLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 23 IVNYLPQ--NMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 5666653 22357889999999999877652 1 135778899999888764
No 98
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.65 E-value=1.1e+02 Score=19.90 Aligned_cols=50 Identities=22% Similarity=0.152 Sum_probs=34.4
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHH
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQ 89 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~ 89 (494)
-=++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 7 ~l~v~nlp~--~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQP--GTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCT--TCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 335666642 22356788888999998887642 234677889998888876
No 99
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.81 E-value=1.8e+02 Score=20.38 Aligned_cols=50 Identities=12% Similarity=0.125 Sum_probs=36.8
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHH
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---QVTTVVISSATMAKQVLQ 89 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---~~~~v~v~dp~~~~~i~~ 89 (494)
.=++|++.. .-..+.++++..+||+|..+.+. |.=+|-..+++.+...+.
T Consensus 18 ~LfV~nLp~--~vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 18 VIHIRKLPI--DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp EEEECSCCT--TSCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 345677653 22456789999999999888753 455778889998888876
No 100
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.75 E-value=1.5e+02 Score=20.48 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=31.7
Q ss_pred cHHHHHHHHhhCCceEEecC----CeeEEEeCCHHHHHHHHHh
Q 011093 52 HKSLAELAKVHGPIMSLKFG----QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 52 ~~~~~~~~~kyG~v~~~~~g----~~~~v~v~dp~~~~~i~~~ 90 (494)
.+.++++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 57889999999999888763 3457778899999988875
No 101
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=24.30 E-value=1.6e+02 Score=21.12 Aligned_cols=48 Identities=15% Similarity=0.125 Sum_probs=35.4
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---~~~~v~v~dp~~~~~i~~~ 90 (494)
=++|++ . -..+.+.++..+||+|..+.++ |.-+|-..+++.+...+..
T Consensus 42 lfVgnl-~---~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 42 LYVYGE-D---MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEECS-S---CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEcCC-C---CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 356762 2 3457889999999998777654 4567778899999888754
No 102
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=24.20 E-value=1.7e+02 Score=20.37 Aligned_cols=51 Identities=18% Similarity=0.137 Sum_probs=36.6
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhc
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDH 91 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~ 91 (494)
=++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+...
T Consensus 28 lfV~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 28 MFIGGLSW--QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp EEEESCCT--TCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEeCCCC--CCCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 35666542 23457788999999999887752 23477789999999988754
No 103
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=24.08 E-value=1.7e+02 Score=19.65 Aligned_cols=49 Identities=12% Similarity=0.304 Sum_probs=35.0
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 6 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 6 YLGSIPY--DQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4555542 22357788999999999888762 3456778899999988853
No 104
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=23.94 E-value=1.8e+02 Score=19.93 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=35.5
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
=++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 26 l~V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 35666543 23457789999999999887752 2345678899999988864
No 105
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.67 E-value=1.7e+02 Score=19.72 Aligned_cols=51 Identities=22% Similarity=0.272 Sum_probs=36.3
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHh
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG--------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g--------~~~~v~v~dp~~~~~i~~~ 90 (494)
-=++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 19 ~l~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPF--SCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 445666653 23457788999999998877653 2346778899999988854
No 106
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=23.62 E-value=1.6e+02 Score=19.65 Aligned_cols=50 Identities=18% Similarity=0.196 Sum_probs=35.3
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHh
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG--------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g--------~~~~v~v~dp~~~~~i~~~ 90 (494)
=++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 19 l~v~nlp~--~~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (95)
T 2ywk_A 19 VFVGNLEA--RVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIAL 76 (95)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHH
T ss_pred EEEECCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHH
Confidence 35666543 23457889999999999887652 2346778899999888863
No 107
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.33 E-value=1.8e+02 Score=19.78 Aligned_cols=62 Identities=18% Similarity=0.102 Sum_probs=41.1
Q ss_pred CCCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh-cCccc
Q 011093 32 PPGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQD-HDKSL 95 (494)
Q Consensus 32 pp~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~-~~~~~ 95 (494)
.+.+..-=++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.+...+.. ++..+
T Consensus 11 ~~~~~~~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~ 80 (103)
T 2d9p_A 11 TRYQVVNLYVKNLDD--GIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIV 80 (103)
T ss_dssp CCSSCCCEEEECCCT--TCCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBS
T ss_pred CCCCCCEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEe
Confidence 334444556777653 23457788888999998877653 2346778899999988864 33333
No 108
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=23.22 E-value=1.3e+02 Score=21.59 Aligned_cols=45 Identities=7% Similarity=0.068 Sum_probs=32.2
Q ss_pred CcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcCccc
Q 011093 51 PHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDHDKSL 95 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~~~~~ 95 (494)
..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.-++..+
T Consensus 49 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~ 102 (124)
T 2jwn_A 49 TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVF 102 (124)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEE
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeE
Confidence 457889999999998777652 234677889999998884333333
No 109
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.19 E-value=1.4e+02 Score=20.77 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=39.3
Q ss_pred CCCCCCCcccccccCCCCCcHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHH
Q 011093 33 PGPTPLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---QVTTVVISSATMAKQVLQ 89 (494)
Q Consensus 33 p~p~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---~~~~v~v~dp~~~~~i~~ 89 (494)
+.|...=++|++.. ..-..+.+.++..+||.|..+++. +.-+|-..+.+.+.....
T Consensus 12 ~~p~~~l~V~nLp~-~~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 12 VETRRVVHIMDFQR-GKNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCCEEEEESCCC-SSSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCC-CcCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 34444556788763 022346788899999999888864 345778889998888876
No 110
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=23.02 E-value=2e+02 Score=20.27 Aligned_cols=55 Identities=27% Similarity=0.347 Sum_probs=38.0
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHh-cCcccC
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG--------QVTTVVISSATMAKQVLQD-HDKSLC 96 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g--------~~~~v~v~dp~~~~~i~~~-~~~~~~ 96 (494)
++|++.. .-..+.+.++.++||+|..+.+. |.-+|-..+++.++..+.. ++..+.
T Consensus 11 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~ 74 (116)
T 2fy1_A 11 FIGGLNR--ETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLH 74 (116)
T ss_dssp EEECCTT--TCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 4566542 23457889999999998777652 3456778999999998864 333343
No 111
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.73 E-value=1.8e+02 Score=19.56 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=35.7
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 12 FVRNLSY--TSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEECCCT--TCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 4566542 23456889999999999888763 3356778999999998854
No 112
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.58 E-value=1.5e+02 Score=18.63 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=28.8
Q ss_pred CcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhc
Q 011093 51 PHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDH 91 (494)
Q Consensus 51 ~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~ 91 (494)
..+.+.+...+||+|..+.+. |.-+|-..+++.++..+...
T Consensus 13 t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 13 TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp CSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 356788899999988766542 23355667888888887643
No 113
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.57 E-value=1.4e+02 Score=20.86 Aligned_cols=51 Identities=8% Similarity=0.068 Sum_probs=34.3
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcC
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDHD 92 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~~ 92 (494)
++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.-++
T Consensus 29 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 29 FCMQLAA--RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 4555532 22457788999999999888763 234667788888888774333
No 114
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=22.55 E-value=1.8e+02 Score=19.58 Aligned_cols=51 Identities=22% Similarity=0.165 Sum_probs=34.5
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceE--------EecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMS--------LKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~--------~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
.=++|++.. .-..+.+.++..+||.|.. +.+. |.-+|...+++.++..+..
T Consensus 15 ~l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~ 82 (99)
T 2la6_A 15 TIFVQGLGE--NVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 82 (99)
T ss_dssp EEEEECCCS--SCCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 445677653 2345788899999998866 4431 2345677899999888763
No 115
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=22.49 E-value=2e+02 Score=19.99 Aligned_cols=44 Identities=11% Similarity=0.161 Sum_probs=30.3
Q ss_pred HHHHHHHHhhCCceEEecC-----------CeeEEEeCCHHHHHHHHHh-cCcccC
Q 011093 53 KSLAELAKVHGPIMSLKFG-----------QVTTVVISSATMAKQVLQD-HDKSLC 96 (494)
Q Consensus 53 ~~~~~~~~kyG~v~~~~~g-----------~~~~v~v~dp~~~~~i~~~-~~~~~~ 96 (494)
+-+.+...+||+|..+.+. |.-+|-..+++.+...... ++..|.
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~ 85 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFA 85 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeC
Confidence 4566777899999888763 3346778889888887754 333343
No 116
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=22.34 E-value=2.3e+02 Score=20.58 Aligned_cols=52 Identities=17% Similarity=0.089 Sum_probs=37.2
Q ss_pred CCCcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 37 PLPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 37 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
..-++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 47 ~~l~V~nLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 47 CCLGVFGLSL--YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp SCBCEETCTT--SCCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3445677653 23457789999999999887752 2346778899999998874
No 117
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.26 E-value=1.8e+02 Score=19.31 Aligned_cols=51 Identities=12% Similarity=0.123 Sum_probs=36.8
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
.=++|++.. .-..+.+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 ~l~V~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 18 TVYVSNLPF--SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp SEEEESCCT--TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 445677652 23457788999999999887752 2346778999999988853
No 118
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.20 E-value=2.2e+02 Score=20.46 Aligned_cols=50 Identities=12% Similarity=0.125 Sum_probs=36.7
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHH
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---QVTTVVISSATMAKQVLQ 89 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---~~~~v~v~dp~~~~~i~~ 89 (494)
.=++|++.. .-..+.++++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 33 ~LfVgNLp~--~vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPI--DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 446777753 23457889999999998877653 455777888888888875
No 119
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=22.10 E-value=2e+02 Score=19.96 Aligned_cols=49 Identities=16% Similarity=0.254 Sum_probs=35.6
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+ -|.-+|-..+.+.+...+..
T Consensus 35 ~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 35 FVRPFPL--DVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EECSSCT--TCCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 4555532 2235778999999999877765 45667788899999988864
No 120
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=22.09 E-value=2e+02 Score=19.85 Aligned_cols=50 Identities=12% Similarity=0.094 Sum_probs=36.5
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~ 90 (494)
=++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 29 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 29 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 35666543 23457789999999999888763 3456778899999988863
No 121
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.97 E-value=1.9e+02 Score=19.62 Aligned_cols=57 Identities=14% Similarity=0.053 Sum_probs=39.0
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh-cCcccC
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQD-HDKSLC 96 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~-~~~~~~ 96 (494)
-=++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.
T Consensus 15 ~l~V~nLp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 81 (103)
T 2dnm_A 15 TLKVDNLTY--RTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELD 81 (103)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBT
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 335677653 23457889999999999888763 3346778888888888863 444443
No 122
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.72 E-value=2e+02 Score=19.59 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=36.8
Q ss_pred CCcccccccCCCCCcHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 011093 38 LPIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 38 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~ 90 (494)
-=++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~l~V~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 17 RLHVSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEEESCCT--TCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 345677653 23457788999999999887752 3456778899999998864
No 123
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.48 E-value=1.9e+02 Score=19.43 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=39.5
Q ss_pred CcccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcCcccCC
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDHDKSLCN 97 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~~~~~~~ 97 (494)
=++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.-++..+..
T Consensus 13 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g 78 (99)
T 2dgs_A 13 IFVGGIPH--NCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMG 78 (99)
T ss_dssp EEEESCCS--SCCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECC
Confidence 35666643 23457789999999999887752 23567789999999988754444443
No 124
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=21.46 E-value=2.2e+02 Score=20.09 Aligned_cols=50 Identities=16% Similarity=0.152 Sum_probs=36.6
Q ss_pred CcccccccCCCCCcHHHHHHHHhhC-CceEEecC-----CeeEEEeCCHHHHHHHHHh
Q 011093 39 PIIGNLLELGHKPHKSLAELAKVHG-PIMSLKFG-----QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 39 p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~g-----~~~~v~v~dp~~~~~i~~~ 90 (494)
=++|++.. .-..+.++++.++|| +|..+.+. |.-+|-..+++.++..+..
T Consensus 31 l~VgnLp~--~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 31 ITMKNLPE--GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEECSSC--CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEECCCC--CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 35677652 334578899999999 78777663 4567888899999888864
No 125
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=21.11 E-value=1.9e+02 Score=19.34 Aligned_cols=56 Identities=14% Similarity=0.207 Sum_probs=39.2
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHh-cCcccC
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKF-GQVTTVVISSATMAKQVLQD-HDKSLC 96 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-g~~~~v~v~dp~~~~~i~~~-~~~~~~ 96 (494)
++|++.. ..-..+.+.++..+||+|..+.+ -|.-+|-..+++.+...+.. ++..+.
T Consensus 14 ~V~nlp~-~~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~ 71 (96)
T 2kvi_A 14 FIGNLPL-KNVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNF 71 (96)
T ss_dssp EEESSTT-SCCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCB
T ss_pred EEeCCCc-ccCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeC
Confidence 5677652 02245788999999999888775 34567788999999998874 343333
No 126
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=20.89 E-value=1.4e+02 Score=20.88 Aligned_cols=62 Identities=11% Similarity=0.102 Sum_probs=37.7
Q ss_pred CCCCCccccccc---CCCCCcHHHHHHHHhhCCceEEecC----------CeeEEEeCCHHHHHHHHHh-cCcccC
Q 011093 35 PTPLPIIGNLLE---LGHKPHKSLAELAKVHGPIMSLKFG----------QVTTVVISSATMAKQVLQD-HDKSLC 96 (494)
Q Consensus 35 p~~~p~lG~~~~---~~~~~~~~~~~~~~kyG~v~~~~~g----------~~~~v~v~dp~~~~~i~~~-~~~~~~ 96 (494)
|...=++.|... +..+..+.+.+...+||+|..+.+. |.=+|-..+++.+...... ++..|.
T Consensus 7 ~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~ 82 (105)
T 2pe8_A 7 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 82 (105)
T ss_dssp CCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred CCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEEC
Confidence 334445666653 2234567788888999998887642 2235667888888877754 444443
No 127
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.84 E-value=1.4e+02 Score=20.84 Aligned_cols=49 Identities=12% Similarity=0.129 Sum_probs=34.4
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 33 ~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 33 HVSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EEESCCT--TCCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EEECCCC--cCCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 4555542 23457788999999998777653 3456777888888888763
No 128
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.67 E-value=2.2e+02 Score=19.69 Aligned_cols=49 Identities=14% Similarity=0.160 Sum_probs=36.1
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 29 ~V~nl~~--~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 29 YCGGIAS--GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEECCSS--CCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 5666653 23457888999999999887753 4567778899999888854
No 129
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.35 E-value=1.4e+02 Score=20.95 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=35.7
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcC
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG---------QVTTVVISSATMAKQVLQDHD 92 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g---------~~~~v~v~dp~~~~~i~~~~~ 92 (494)
++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..++
T Consensus 31 ~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~ 90 (116)
T 1x4b_A 31 FIGGLSF--ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP 90 (116)
T ss_dssp EEECCTT--CCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCC
Confidence 4555542 23457788999999998776642 244677889999999987543
No 130
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=20.25 E-value=1.9e+02 Score=18.99 Aligned_cols=49 Identities=16% Similarity=0.125 Sum_probs=35.0
Q ss_pred cccccccCCCCCcHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 011093 40 IIGNLLELGHKPHKSLAELAKVHGPIMSLKFG-------QVTTVVISSATMAKQVLQD 90 (494)
Q Consensus 40 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~g-------~~~~v~v~dp~~~~~i~~~ 90 (494)
++|++.. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 12 FVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 5666642 23457889999999998877653 2345677899999988764
Done!