Query 011094
Match_columns 494
No_of_seqs 316 out of 1580
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 08:02:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011094.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011094hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 6E-100 1E-104 789.7 25.5 372 109-483 41-414 (571)
2 COG1621 SacC Beta-fructosidase 100.0 1.3E-83 2.7E-88 681.7 34.4 334 116-478 27-374 (486)
3 PF00251 Glyco_hydro_32N: Glyc 100.0 1.5E-78 3.2E-83 617.3 26.6 299 122-440 1-308 (308)
4 smart00640 Glyco_32 Glycosyl h 100.0 7.4E-77 1.6E-81 631.8 39.2 339 122-481 1-353 (437)
5 TIGR01322 scrB_fam sucrose-6-p 100.0 5E-77 1.1E-81 634.4 36.4 302 117-452 13-335 (445)
6 cd08996 GH32_B_Fructosidase Gl 100.0 2.3E-68 5E-73 536.8 33.2 286 128-443 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 2.2E-55 4.8E-60 439.1 30.6 266 131-433 1-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 1.1E-38 2.3E-43 314.6 26.8 242 132-405 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 3.2E-36 6.9E-41 296.7 27.7 268 131-426 1-285 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 4.8E-26 1E-30 235.1 24.8 183 132-318 9-246 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 2.1E-22 4.5E-27 202.5 20.0 189 121-318 4-282 (291)
12 cd08984 GH43_5 Glycosyl hydrol 99.8 1.1E-19 2.4E-24 183.9 21.3 184 108-318 52-246 (294)
13 cd08993 GH43_DUF377 Glycosyl h 99.8 1.9E-19 4.2E-24 179.4 20.4 160 132-313 2-169 (268)
14 cd09004 GH43_bXyl Glycosyl hyd 99.8 2.5E-19 5.5E-24 178.9 20.2 192 127-353 5-197 (275)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.8 4.7E-17 1E-21 162.7 21.6 206 128-364 6-224 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 4E-16 8.7E-21 155.9 20.3 195 132-353 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.7 6.2E-15 1.3E-19 144.9 21.3 202 132-364 2-214 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.6 2.3E-14 5.1E-19 144.2 20.8 199 132-363 2-225 (294)
19 cd08998 GH43_ABN_1 Glycosyl hy 99.6 2E-13 4.3E-18 137.5 20.5 169 130-318 1-182 (288)
20 cd08992 GH43_like_1 Glycosyl h 99.6 1.3E-13 2.9E-18 142.9 18.0 170 119-296 25-241 (349)
21 cd08984 GH43_5 Glycosyl hydrol 99.5 3.6E-13 7.7E-18 136.5 19.5 169 130-318 11-193 (294)
22 PF11837 DUF3357: Domain of un 99.5 1.7E-15 3.7E-20 132.0 -0.9 97 14-114 7-106 (106)
23 cd08985 GH43_6 Glycosyl hydrol 99.5 1.1E-11 2.5E-16 124.0 24.6 197 132-364 5-211 (265)
24 cd08979 GH_J Glycosyl hydrolas 99.4 8.3E-12 1.8E-16 123.2 16.8 158 107-275 37-209 (276)
25 PF04616 Glyco_hydro_43: Glyco 99.4 3.8E-11 8.2E-16 119.6 20.9 183 128-344 8-200 (286)
26 cd09000 GH43_XYL_1 Glycosyl hy 99.4 5.5E-11 1.2E-15 119.9 20.5 168 128-318 6-186 (288)
27 cd09003 GH43_AXH_1 Glycosyl hy 99.3 1.4E-10 3E-15 118.9 21.0 186 128-343 7-215 (311)
28 PF04041 DUF377: Domain of unk 99.3 9.3E-12 2E-16 127.8 11.8 159 135-311 36-201 (312)
29 cd08983 GH43_4 Glycosyl hydrol 99.3 3.4E-10 7.3E-15 114.2 22.2 182 127-342 15-206 (276)
30 cd08992 GH43_like_1 Glycosyl h 99.3 5.7E-10 1.2E-14 116.0 20.8 190 108-316 84-308 (349)
31 cd08981 GH43_2 Glycosyl hydrol 99.2 1.2E-09 2.6E-14 111.0 20.1 135 128-274 4-142 (291)
32 cd08988 GH43_ABN Glycosyl hydr 99.1 3E-09 6.6E-14 107.1 19.7 169 132-318 2-183 (279)
33 cd08989 GH43_XYL Glycosyl hydr 99.1 1.4E-08 3.1E-13 101.8 19.7 125 128-274 6-136 (269)
34 cd08980 GH43_1 Glycosyl hydrol 99.0 3.1E-08 6.6E-13 99.9 19.4 190 132-354 2-205 (288)
35 cd09001 GH43_XYL_2 Glycosyl hy 99.0 4.4E-08 9.6E-13 98.3 19.7 159 128-318 9-181 (269)
36 cd08986 GH43_7 Glycosyl hydrol 98.9 5.7E-08 1.2E-12 97.5 17.6 168 129-318 1-192 (269)
37 cd08993 GH43_DUF377 Glycosyl h 98.9 1.2E-08 2.7E-13 101.8 11.8 99 193-300 3-105 (268)
38 PF02435 Glyco_hydro_68: Levan 98.8 1.6E-07 3.4E-12 99.4 18.5 183 131-318 63-309 (428)
39 cd08982 GH43_3 Glycosyl hydrol 98.8 3.7E-07 8.1E-12 93.1 18.5 109 130-275 3-111 (295)
40 cd08995 GH32_Aec43_like Glycos 98.8 2.7E-07 5.8E-12 92.5 17.1 154 108-275 35-200 (280)
41 cd09002 GH43_XYL_3 Glycosyl hy 98.8 1E-07 2.2E-12 96.3 13.9 122 128-274 13-134 (280)
42 cd08994 GH43_like_2 Glycosyl h 98.7 1.3E-07 2.9E-12 95.2 13.1 108 131-243 81-198 (291)
43 COG2152 Predicted glycosylase 98.7 1.4E-07 2.9E-12 95.5 12.8 147 135-301 35-193 (314)
44 cd08987 GH62 Glycosyl hydrolas 98.7 7.4E-07 1.6E-11 90.2 18.0 208 115-365 6-230 (303)
45 cd08978 GH_F Glycosyl hydrolas 98.6 9.3E-07 2E-11 86.9 16.1 156 127-296 56-215 (271)
46 cd08999 GH43_ABN_2 Glycosyl hy 98.6 1.3E-06 2.9E-11 87.3 16.0 172 112-297 39-226 (287)
47 cd08772 GH43_62_32_68 Glycosyl 98.5 2.7E-06 5.9E-11 83.8 16.0 157 128-296 58-224 (286)
48 cd08991 GH43_bXyl_2 Glycosyl h 98.5 6E-06 1.3E-10 83.2 16.8 154 129-296 54-227 (294)
49 cd08990 GH43_AXH_like Glycosyl 98.4 5.9E-06 1.3E-10 82.7 15.8 152 128-300 62-220 (274)
50 cd08996 GH32_B_Fructosidase Gl 98.4 3.6E-06 7.9E-11 85.0 13.5 157 107-275 36-201 (298)
51 cd08998 GH43_ABN_1 Glycosyl hy 98.3 2E-05 4.4E-10 79.4 17.2 153 128-294 56-217 (288)
52 cd08986 GH43_7 Glycosyl hydrol 98.3 6.2E-06 1.3E-10 82.9 12.8 121 254-399 2-147 (269)
53 PF04041 DUF377: Domain of unk 98.3 1.8E-06 3.8E-11 89.0 8.8 107 186-301 28-137 (312)
54 cd08983 GH43_4 Glycosyl hydrol 98.3 6.4E-06 1.4E-10 83.2 12.3 79 238-319 4-88 (276)
55 PF04616 Glyco_hydro_43: Glyco 98.2 3E-05 6.5E-10 77.3 14.4 172 110-296 40-222 (286)
56 TIGR01322 scrB_fam sucrose-6-p 98.1 5.4E-05 1.2E-09 81.6 14.1 156 109-275 61-225 (445)
57 cd08981 GH43_2 Glycosyl hydrol 98.0 6.2E-05 1.3E-09 76.7 13.4 66 252-318 4-77 (291)
58 cd08989 GH43_XYL Glycosyl hydr 98.0 9.2E-05 2E-09 74.4 13.6 68 240-318 1-77 (269)
59 cd09002 GH43_XYL_3 Glycosyl hy 97.9 0.00017 3.8E-09 72.9 14.1 68 239-318 7-74 (280)
60 cd08997 GH68 Glycosyl hydrolas 97.9 0.00025 5.4E-09 74.2 15.3 178 107-295 45-284 (349)
61 smart00640 Glyco_32 Glycosyl h 97.8 0.00013 2.9E-09 78.4 12.2 158 107-275 42-215 (437)
62 cd08988 GH43_ABN Glycosyl hydr 97.8 0.0011 2.5E-08 66.8 16.8 145 130-291 57-214 (279)
63 COG2152 Predicted glycosylase 97.7 0.00014 3E-09 74.0 8.7 105 189-302 30-141 (314)
64 cd08980 GH43_1 Glycosyl hydrol 97.7 0.0012 2.6E-08 66.7 15.5 146 125-274 108-259 (288)
65 cd09004 GH43_bXyl Glycosyl hyd 97.7 0.0011 2.4E-08 66.4 15.0 138 131-297 67-212 (275)
66 cd09001 GH43_XYL_2 Glycosyl hy 97.5 0.0023 4.9E-08 64.3 15.1 133 130-295 76-212 (269)
67 cd08985 GH43_6 Glycosyl hydrol 97.5 0.0043 9.4E-08 62.3 16.7 146 130-299 65-215 (265)
68 cd00260 Sialidase Sialidases o 97.4 0.0044 9.6E-08 63.9 16.2 167 115-298 59-240 (351)
69 cd09003 GH43_AXH_1 Glycosyl hy 97.4 0.0056 1.2E-07 63.0 16.6 167 112-300 55-248 (311)
70 cd09000 GH43_XYL_1 Glycosyl hy 97.4 0.0064 1.4E-07 61.4 16.1 144 130-296 68-219 (288)
71 PF13088 BNR_2: BNR repeat-lik 97.3 0.012 2.7E-07 58.1 17.0 164 115-297 31-200 (275)
72 COG3507 XynB Beta-xylosidase [ 97.3 0.00093 2E-08 72.8 9.4 140 162-318 56-215 (549)
73 PF03664 Glyco_hydro_62: Glyco 97.3 0.027 5.8E-07 56.0 18.1 208 120-365 13-229 (271)
74 cd08982 GH43_3 Glycosyl hydrol 96.8 0.019 4.1E-07 58.7 12.7 134 127-272 88-237 (295)
75 PF00251 Glyco_hydro_32N: Glyc 96.6 0.038 8.2E-07 56.7 13.3 139 108-260 43-190 (308)
76 PF13088 BNR_2: BNR repeat-lik 96.5 0.1 2.2E-06 51.6 15.4 146 141-299 1-153 (275)
77 cd08987 GH62 Glycosyl hydrolas 95.9 0.19 4.2E-06 51.5 14.2 143 131-296 79-230 (303)
78 cd00260 Sialidase Sialidases o 93.3 11 0.00024 38.7 21.6 146 158-318 45-207 (351)
79 PF13859 BNR_3: BNR repeat-lik 93.2 0.42 9E-06 49.6 8.9 91 193-301 124-217 (310)
80 COG3940 Predicted beta-xylosid 92.5 0.93 2E-05 44.6 9.6 111 129-245 131-248 (324)
81 PF13810 DUF4185: Domain of un 85.3 21 0.00045 37.2 14.0 157 132-300 96-276 (316)
82 PTZ00334 trans-sialidase; Prov 84.8 6.3 0.00014 45.7 10.7 89 193-300 263-353 (780)
83 PF13810 DUF4185: Domain of un 76.5 13 0.00027 38.8 8.7 95 198-298 102-211 (316)
84 PF02435 Glyco_hydro_68: Levan 72.7 1E+02 0.0022 33.6 14.5 127 140-275 143-319 (428)
85 COG3507 XynB Beta-xylosidase [ 72.0 65 0.0014 36.1 13.1 79 125-212 86-167 (549)
86 PF03664 Glyco_hydro_62: Glyco 59.2 2.1E+02 0.0046 29.1 12.9 71 131-211 77-153 (271)
87 PF15176 LRR19-TM: Leucine-ric 58.9 16 0.00035 31.8 4.3 29 29-57 10-38 (102)
88 COG1621 SacC Beta-fructosidase 41.0 2.3E+02 0.0051 31.4 10.8 118 112-237 79-204 (486)
89 PF10898 DUF2716: Protein of u 36.1 24 0.00053 32.7 2.0 36 114-149 81-120 (143)
90 PF11807 DUF3328: Domain of un 24.6 97 0.0021 28.9 4.1 11 29-39 3-13 (217)
91 PF12273 RCR: Chitin synthesis 24.6 69 0.0015 28.7 2.9 11 140-150 81-91 (130)
92 PF12111 PNPase_C: Polyribonuc 24.5 25 0.00054 25.5 0.0 12 115-126 7-18 (39)
93 KOG0228 Beta-fructofuranosidas 21.9 3.1E+02 0.0068 30.7 7.6 79 199-286 68-150 (571)
94 PF09601 DUF2459: Protein of u 21.3 56 0.0012 31.1 1.7 20 132-151 130-150 (173)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-100 Score=789.72 Aligned_cols=372 Identities=51% Similarity=0.933 Sum_probs=356.0
Q ss_pred CCccccccccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCC
Q 011094 109 WTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN 188 (494)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~ 188 (494)
+++...+++||.|||||++|||||| +|++|+|||||||||++++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 5677788999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC--CCCCCCCCCCCeeEeecCCC
Q 011094 189 GVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDG 266 (494)
Q Consensus 189 Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p--~g~~~~~fRDP~V~w~~~dg 266 (494)
|||||||+++++|+.++||||...+..|+|++|++.|.+||.|+.|+|.++||++.++ .+++...||||+++|.+++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999988899999999999999999999999999999988 78888999999999999999
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCc
Q 011094 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346 (494)
Q Consensus 267 ~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~ 346 (494)
+|+|++|++.+++|.+++|+|+||++|+....++|....+|||||||||||..++.++++++..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988899999999999999999999999888899999999999999999999999988888999999999999
Q ss_pred eeEEEEEEecCCCCcccCCCCCcccccceeeecCCCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEE
Q 011094 347 VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (494)
Q Consensus 347 ~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l 426 (494)
.++|+||+||+++.+|+|++...++..++|+|||+|||+|||+|..++|||+|||++|+++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999999999999988887789999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEEEE
Q 011094 427 LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISLK 483 (494)
Q Consensus 427 ~l~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~~~ 483 (494)
+|++..|..|.||||+|+|.||.......+..+++|+++++...++.|.|+|++|+-
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~ 414 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEV 414 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEe
Confidence 999877889999999999999999888788899999999999999999999998863
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-83 Score=681.73 Aligned_cols=334 Identities=35% Similarity=0.695 Sum_probs=283.7
Q ss_pred cccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 011094 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (494)
Q Consensus 116 w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSa 195 (494)
-+||.|||+|+.||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEE
Q 011094 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (494)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~Mv 271 (494)
|+ .+|++.+||||+.. .+.+.||+|+|+|+ .+|+|+.+|||+..|.++ +.+||||+|+|+ ++|+|||+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCcEEEE
Confidence 86 68999999999974 25689999999995 789998789999988886 789999998796 78999999
Q ss_pred Eeee-cCCeeEEEEEEeCCCCCCEEcCcccccCCCC-CceEeccEEEecccCccccccccCCCCeEEEEEeeeCC-----
Q 011094 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD----- 344 (494)
Q Consensus 272 iGa~-~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~-gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~----- 344 (494)
+||+ .+..|.|++|+|.||++|++.+++..+..+. +||||||||+|++. ..+.+|+ +..+.++
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~~~~p--------qg~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVLLFWP--------QGLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--CceEEcc--------eeeecCCCcCCC
Confidence 9998 4668999999999999999999998763333 49999999999854 3444444 4344332
Q ss_pred CceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCC--CCCcCCCCccCCc
Q 011094 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQT 421 (494)
Q Consensus 345 ~~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~--~~~~~~gWag~ls 421 (494)
.....|++|.||++ +|..... -..++|+| +|||+|||.++ ++|||++|||++|+.. .++...||+||||
T Consensus 249 ~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 22467999999987 4544332 13579999 89999999996 7999999999999986 6777789999999
Q ss_pred ccEEEEEeeCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEE
Q 011094 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILH 478 (494)
Q Consensus 422 lPR~l~l~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~ 478 (494)
|||||+|. +| +|+|+||+||++||..+..+.++.++..+.+++..+.+.++++.
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 374 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGNSKLELPSGDAYELDLD 374 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccceeeeccCCccEEEEEE
Confidence 99999995 34 89999999999999997778888887765455555555555444
No 3
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=1.5e-78 Score=617.31 Aligned_cols=299 Identities=42% Similarity=0.850 Sum_probs=249.7
Q ss_pred eeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 011094 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (494)
Q Consensus 122 Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (494)
||+|++||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred eEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcC-CCceecC-CCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCe
Q 011094 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279 (494)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~-~nPVi~~-p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~ 279 (494)
+++|||||+..+..|.|++|+|.|.+ ++|+|++ +||||.. |++ ...+||||+|+|. ++|+|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999996653 8999998 4999996 444 7789999999887 4699999999987788
Q ss_pred eEEEEEEeCCCCCCEEcCcccccCC-CCCceEeccEEEecccCccccccccCCCCeEEEEEeee----CCCceeEEEEEE
Q 011094 280 GISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL----DDTKVDHYAIGT 354 (494)
Q Consensus 280 G~v~lY~S~Dl~~W~~~~~ll~~~~-~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~----~~~~~~~Y~iG~ 354 (494)
|++++|+|+||++|++.+.+..... ..+||||||||+|++.+. .+...+|||.+|. .....++|+||+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999876433 356999999999987511 0123568999998 455678999999
Q ss_pred ecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCC-CcCCCCccCCcccEEEEEeeCC
Q 011094 355 YNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESD-DLEKGWASVQTIPRTVLYDNKT 432 (494)
Q Consensus 355 ~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~-~~~~gWag~lslPR~l~l~~~~ 432 (494)
||..+++|+++.. ...++|+| +|||+|+|.++.++||||||||++++.... ....||+|+|||||+|.|++ +
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 9877889987621 25789999 599999999986569999999999886532 23699999999999999975 4
Q ss_pred CceEEEcc
Q 011094 433 GSNVVQWP 440 (494)
Q Consensus 433 g~~L~q~P 440 (494)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 55899998
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=7.4e-77 Score=631.80 Aligned_cols=339 Identities=50% Similarity=0.946 Sum_probs=272.8
Q ss_pred eeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 011094 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (494)
Q Consensus 122 Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (494)
||+|+.||||||||++|++|+|||||||+|.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 567
Q ss_pred eEEEEEeccCCC------ccceE-EEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 202 QIVMLYTGSTDK------SVQVQ-NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 202 ~~~~~YTG~~~~------~~q~q-~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
+++|||||+... ..+.| +.|.++| +++|+|+++|||+.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999998421 12333 4555555 38999998899999877666789999999775 44799999998
Q ss_pred e-cCCeeEEEEEEeCCCCCCEEcCccccc-CCCC-CceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEE
Q 011094 275 K-IGKTGISLVYQTTDFKTYELLDEYLHA-VPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351 (494)
Q Consensus 275 ~-~~~~G~v~lY~S~Dl~~W~~~~~ll~~-~~~~-gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~ 351 (494)
+ .++.|++++|+|+||++|++.+.++.. .... +||||||||+|++++ ...||||.+|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 6 456799999999999999999998754 1223 699999999997543 23699999998876678999
Q ss_pred EEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCC-CCcCCCCccCCcccEEEEEe
Q 011094 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTES-DDLEKGWASVQTIPRTVLYD 429 (494)
Q Consensus 352 iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~-~~~~~gWag~lslPR~l~l~ 429 (494)
+|.|+++ .+|+|+... +...+.++|+| +|||+|||.+++.+||||||||++++... .....||+|+|||||+|.|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 479887653 22334589999 89999999997556999999999987422 22238999999999999997
Q ss_pred eCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeec--CceeEEEEEEEE
Q 011094 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDI--GVATQVILHTIS 481 (494)
Q Consensus 430 ~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~--~~~~qldi~~~~ 481 (494)
.++| +|+|+||+||++||.. .....+++.++....+.. ..+.+++|+|++
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 353 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSF 353 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEE
Confidence 5455 7999999999999954 334445555443322221 234456666654
No 5
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=5e-77 Score=634.38 Aligned_cols=302 Identities=33% Similarity=0.643 Sum_probs=259.4
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (494)
+||+|||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+|||||+++|+||.|+..||..|||||||+
T Consensus 13 ~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsav 92 (445)
T TIGR01322 13 WRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSAV 92 (445)
T ss_pred cCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EccCCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEE
Q 011094 197 ILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTI 272 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~Mvi 272 (494)
+ .+|+++|||||+.. ...+.||+|+|.|+ .+|+|+. +|||.++++....+||||+| |. .+|+|+|++
T Consensus 93 ~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~~ 163 (445)
T TIGR01322 93 D-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMVI 163 (445)
T ss_pred e-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEEE
Confidence 6 78999999999752 23578999999985 6999984 59998755544678999999 54 478999999
Q ss_pred eeec-CCeeEEEEEEeCCCCCCEEcCcccccC----CCC-CceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC-
Q 011094 273 GSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT- 345 (494)
Q Consensus 273 Ga~~-~~~G~v~lY~S~Dl~~W~~~~~ll~~~----~~~-gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~- 345 (494)
|++. +..|++++|+|+||++|++.+.+.... ... .||||||||+|++ ||||.+|..+.
T Consensus 164 g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~~ 228 (445)
T TIGR01322 164 GAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGLD 228 (445)
T ss_pred EEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEeccccC
Confidence 9874 456899999999999999999887542 222 4999999999962 45555553321
Q ss_pred ---------ceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCC
Q 011094 346 ---------KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415 (494)
Q Consensus 346 ---------~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~g 415 (494)
....|++|+||..+.+|++++. ...+|+| +|||+|||.++ ++||||||||++++...++.+.|
T Consensus 229 ~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~~ 301 (445)
T TIGR01322 229 ASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRDG 301 (445)
T ss_pred cccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccCC
Confidence 1356999999988889987643 2479999 89999999986 69999999999998777777899
Q ss_pred CccCCcccEEEEEeeCCCceEEEcchHHHHhhhhcCe
Q 011094 416 WASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452 (494)
Q Consensus 416 Wag~lslPR~l~l~~~~g~~L~q~Pv~Ele~LR~~~~ 452 (494)
|+|+|||||+|.|+ +| +|+|+||+||++||.+..
T Consensus 302 W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~ 335 (445)
T TIGR01322 302 WAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEH 335 (445)
T ss_pred cccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCcc
Confidence 99999999999996 45 899999999999998654
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=2.3e-68 Score=536.77 Aligned_cols=286 Identities=42% Similarity=0.797 Sum_probs=243.2
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
||||||||++|++|+||||||++|.++.|++++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988899999999999876559999999
Q ss_pred eccCC---CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCeeEEE
Q 011094 208 TGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (494)
Q Consensus 208 TG~~~---~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G~v~ 283 (494)
||... ...+.|++|+|+|. +++|+|...+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|++.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 45789999999853 389999988998863 3345679999999653 499999999874 4568999
Q ss_pred EEEeCCCCCCEEcCccc-ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC------ceeEEEEEEec
Q 011094 284 VYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT------KVDHYAIGTYN 356 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~ll-~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~------~~~~Y~iG~~d 356 (494)
+|+|+||++|++.+.+. ......+|||||+||+++. ..||||.+|.... ...+|++|+||
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999998874 2222345999999999973 1378888887643 35689999999
Q ss_pred CCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeCCCce
Q 011094 357 PANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSN 435 (494)
Q Consensus 357 ~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~~g~~ 435 (494)
.. +|+++. ....++|+| +|||+|+|.++ ++||||||||++++...+....||+|+|||||+|.|++ ++ +
T Consensus 221 ~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~-~~-~ 290 (298)
T cd08996 221 GT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD-GG-R 290 (298)
T ss_pred CC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc-CC-E
Confidence 76 455431 124689999 89999999997 79999999999998877788999999999999999985 33 8
Q ss_pred EEEcchHH
Q 011094 436 VVQWPVEE 443 (494)
Q Consensus 436 L~q~Pv~E 443 (494)
|.|+||+|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=2.2e-55 Score=439.13 Aligned_cols=266 Identities=23% Similarity=0.419 Sum_probs=219.5
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCC--CCcEEEEEEecCccCeeecceeccC-CCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVP-DQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~w--g~~~WGHA~S~DLvhW~~~p~AL~P-d~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
.||. ++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.| +..+|..|||+|||++ .+|+++|||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 4886 999999999999999999888 8999999999999999999999988 4567889999999986 679999999
Q ss_pred eccCCC--ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CCee
Q 011094 208 TGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG 280 (494)
Q Consensus 208 TG~~~~--~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~~G 280 (494)
||+... ..+.|++|+|+|+ ++|+|.+.+||+.+++++...+||||+|+|.+.+|+|+|++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 998642 4678999999885 899999888998755566667899999966544799999999874 4578
Q ss_pred EEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC-CceeEEEEEEecCCC
Q 011094 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNPAN 359 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~-~~~~~Y~iG~~d~~~ 359 (494)
++.+|+|+||++|++.+.+... ....|||||++|+++ .||||..|... .....|++|+. . .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~---------------g~~~L~~s~~~~~~~~~Y~~~~~-~-~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG---------------DWWYLVYSEFSENRKTHYRVSKS-P-F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEEC---------------CEEEEEEEeccCCCcEEEEEeCC-C-C
Confidence 9999999999999999876543 234599999999996 27888888753 34567999962 2 3
Q ss_pred CcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeCCC
Q 011094 360 DKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (494)
Q Consensus 360 ~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~~g 433 (494)
+.|..... ..+| | +|||+|||.|+ +||||||||++++.+.++.++||+|+|| ||+|.+.+ +|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECC-CC
Confidence 45642211 1378 6 89999999996 8999999999999888888999999999 67777763 56
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=1.1e-38 Score=314.63 Aligned_cols=242 Identities=26% Similarity=0.322 Sum_probs=189.6
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceec--cCCCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAM--VPDQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~-~~WGHA~S~DLvhW~~~p~AL--~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
||+++. |+||||||++|.+..++. ..||||+|+||+||++.+.+| .+...+|..+||+|+++...||+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565444 889999999999876554 568999999999999999887 56667899999999998765599999999
Q ss_pred ccCC--CccceEEEEEEcCCCCCCcceEEEcCCCcee-----cCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCee
Q 011094 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG 280 (494)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi-----~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G 280 (494)
|... ...+.|++|+|+|+ ++|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 45688999999985 899998777754 222233456899999965433499999999864 3457
Q ss_pred EEEEEEeCCCCCCEEcCccc--ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC-CceeEEEEEEecC
Q 011094 281 ISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNP 357 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~ll--~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~-~~~~~Y~iG~~d~ 357 (494)
++.+|+|+|+++|++.+.+. .......++|||++|+++ .+|+|..+... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~---------------g~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID---------------GRWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC---------------CEEEEEEEecCccCCccEEEEeccc
Confidence 88999999999999988763 222234699999999995 27888888653 4467899998765
Q ss_pred CCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCC
Q 011094 358 ANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 405 (494)
Q Consensus 358 ~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~ 405 (494)
. .|+|.. ...+|+| +|||+|++.+..++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455431 1358888 8999999998656999999999976
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=3.2e-36 Score=296.71 Aligned_cols=268 Identities=26% Similarity=0.396 Sum_probs=202.6
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
|||+ +++++|+||||||++|.+ ++++|+||+|+||+||++++.++. |..+++..+||+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999875 678999999999999999998874 67777889999999987655999999
Q ss_pred EeccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecC-CCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCeeEEE
Q 011094 207 YTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (494)
Q Consensus 207 YTG~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~-p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G~v~ 283 (494)
||+... ...+.|++|+|+|+. ..|++...+||+.. +......++|||+|+ .+++|+|||++++.. ...+.+.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeEE
Confidence 999753 346889999998863 45776655566543 223344679999995 456699999999763 2356788
Q ss_pred EEEeCCCCCCEEcCcc--cccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC------CceeEEEEEEe
Q 011094 284 VYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD------TKVDHYAIGTY 355 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~------~~~~~Y~iG~~ 355 (494)
+++|+|+.+|+..+.. .......+++|||++|+++ .+++|..|... .....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~---------------g~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN---------------GKYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC---------------CEEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 2222345699999999985 26777777654 23456777764
Q ss_pred cCCCCcccCCCCCc-ccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEE
Q 011094 356 NPANDKWTPDNPEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (494)
Q Consensus 356 d~~~~~f~p~~~~~-d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l 426 (494)
+ .+.|++..... -.-.....|.+ .+||+++|.++ ++|++|++|+.+.+.... ...+|+++|+|||++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 3 45676543210 00011234556 79999999987 799999999998765333 567999999999986
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.95 E-value=4.8e-26 Score=235.07 Aligned_cols=183 Identities=21% Similarity=0.224 Sum_probs=132.1
Q ss_pred CCccce-EECCEEEEEEeeCCCC----CCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 132 DPNGPL-FYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 132 DPNG~~-y~~G~YHLFYQ~nP~~----~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
|..|-+ -++|+.-+|+...|.. +.|+.++|||++|+||+||++.+. |.|+.++|..|||||||++..||+++||
T Consensus 9 d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~lf 87 (349)
T cd08997 9 DRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQLF 87 (349)
T ss_pred CCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEEEE
Confidence 556633 4688754999877664 467899999999999999999554 6788999999999999987667999999
Q ss_pred EeccCC----CccceEEEEEEcCCCCCCcceEEEcC--CCceecCC--------------CCCCCCCCCCCeeEeecCCC
Q 011094 207 YTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP--------------RHIGPKDFRDPTTAWAGPDG 266 (494)
Q Consensus 207 YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~--~nPVi~~p--------------~g~~~~~fRDP~V~w~~~dg 266 (494)
|||+.. .....|++|.+.+.. +..|.+.. ..+++.+. ++-...+||||+|+..+++|
T Consensus 88 YTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 88 YTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 999853 235678887765531 22333321 12343321 11125689999994333379
Q ss_pred eEEEEEeeecC-C---------------------------eeEEEEE--EeCCCCCCEEcCcccccCCCCCceEeccEEE
Q 011094 267 KWRLTIGSKIG-K---------------------------TGISLVY--QTTDFKTYELLDEYLHAVPGTGMWECVDFYP 316 (494)
Q Consensus 267 ~w~MviGa~~~-~---------------------------~G~v~lY--~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~ 316 (494)
+|||+++++.. . .|+|.++ +|+|+.+|++.++|+.+......||||++|+
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~~ 244 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVVF 244 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEEE
Confidence 99999998632 2 3555555 6779999999999986543355799999999
Q ss_pred ec
Q 011094 317 VA 318 (494)
Q Consensus 317 l~ 318 (494)
++
T Consensus 245 ~~ 246 (349)
T cd08997 245 HN 246 (349)
T ss_pred EC
Confidence 96
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.90 E-value=2.1e-22 Score=202.47 Aligned_cols=189 Identities=19% Similarity=0.263 Sum_probs=140.9
Q ss_pred eeeecCCCcccCCccceEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEecCcc-CeeecceeccCC--CCcCCCcEEe
Q 011094 121 FHFQPEKNWMNDPNGPLFY-KGWYHLFYQYNPDSAV---W-GNITWGHAVSADLI-HWLYLPIAMVPD--QWYDINGVWT 192 (494)
Q Consensus 121 ~Hf~P~~gwmNDPNG~~y~-~G~YHLFYQ~nP~~~~---w-g~~~WGHA~S~DLv-hW~~~p~AL~Pd--~~~D~~Gv~S 192 (494)
.+|..+..++-+|. ++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46778888899998 6665 4899999999887643 2 23569999999987 899999999887 4689999999
Q ss_pred eeEEEccCCeEEEEEeccCC-------CccceEEEEEEcCCCCCCcceEEEcCCCceecCC------------------C
Q 011094 193 GSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP------------------R 247 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p------------------~ 247 (494)
++++. .+|+++|+|||... ...+.+++|+|++. +..|++. .+||+.+. .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99975 68999999999753 23467788888763 2456664 34444220 0
Q ss_pred -------------------------------------------CCCCCCCCCCeeEeecCCCeEEEEEeeec----CCee
Q 011094 248 -------------------------------------------HIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKTG 280 (494)
Q Consensus 248 -------------------------------------------g~~~~~fRDP~V~w~~~dg~w~MviGa~~----~~~G 280 (494)
.....++|||+| |+ .+|+|+|++++.. +..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 001235799999 65 4699999999874 2467
Q ss_pred EEEEEEeCCCCCCEEcCcccc----c-CC----CCCceEeccEE-Eec
Q 011094 281 ISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVA 318 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~ll~----~-~~----~~gmwECPdlf-~l~ 318 (494)
.+.+|+|+|+++|++.+.+.. . .. ...|||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999987741 1 11 23599999999 664
No 12
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.84 E-value=1.1e-19 Score=183.89 Aligned_cols=184 Identities=21% Similarity=0.263 Sum_probs=134.6
Q ss_pred cCCcc-ccccccceeeeecCC----CcccCCccceEECCEEEEEEeeCCCCC--CCCCcEEEEEEecCccCeeecceecc
Q 011094 108 NWTNA-MFTWQRTSFHFQPEK----NWMNDPNGPLFYKGWYHLFYQYNPDSA--VWGNITWGHAVSADLIHWLYLPIAMV 180 (494)
Q Consensus 108 ~~~~~-~~~w~Rp~~Hf~P~~----gwmNDPNG~~y~~G~YHLFYQ~nP~~~--~wg~~~WGHA~S~DLvhW~~~p~AL~ 180 (494)
..+.. +..|+|...-+.+.. .-+.+|. +++++|+||||||++|..+ .++.++||||+|+||++|++.+++..
T Consensus 52 a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~ 130 (294)
T cd08984 52 ASSKDGGATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL 130 (294)
T ss_pred EEeCCCCCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc
Confidence 34455 667766654333222 2235687 7899999999999998753 33578999999999999999887532
Q ss_pred CCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
+..++++++++.+.||+++|+||+... .+.+++|.|.|+ .+|++. .+++.. ...++|+|
T Consensus 131 -----~~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v- 189 (294)
T cd08984 131 -----DSDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV- 189 (294)
T ss_pred -----CCCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-
Confidence 246789999987667999999998643 345689999885 899985 355542 13479999
Q ss_pred eecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCC----CCCceEeccEEEec
Q 011094 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP----GTGMWECVDFYPVA 318 (494)
Q Consensus 261 w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~----~~gmwECPdlf~l~ 318 (494)
|+ .+|+|||+++. ..| +.+|+|+|+.+|++.+.++.... ...+++||+++..+
T Consensus 190 ~k-~~g~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 190 FR-WKGYYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred eE-ECCEEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 54 57999999754 235 56999999999999998775321 12378999999764
No 13
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.84 E-value=1.9e-19 Score=179.43 Aligned_cols=160 Identities=19% Similarity=0.256 Sum_probs=122.6
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccC--CCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVP--DQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p-~AL~P--d~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
|| |+++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 67 5899999999999987643 56899999999999999876 44566 5567889999999975 7999999999
Q ss_pred ccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEee-cCCCeEEEEEeeec---CCeeEEE
Q 011094 209 GSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA-GPDGKWRLTIGSKI---GKTGISL 283 (494)
Q Consensus 209 G~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~-~~dg~w~MviGa~~---~~~G~v~ 283 (494)
+... ...+.+++|.|+|+ ++|+|.. .+ +. + ..||+.+ |. ..+|+|+|++.... +..+.+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~ 141 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMW 141 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEE
Confidence 9863 34578999999985 8999973 21 11 1 2478888 43 35899999996432 3457889
Q ss_pred EEEeCCCCCCEEcCcccccCCCCCceEecc
Q 011094 284 VYQTTDFKTYELLDEYLHAVPGTGMWECVD 313 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~ll~~~~~~gmwECPd 313 (494)
+++|+|+.+|+..+.++... .+.||+-.
T Consensus 142 lA~S~Dl~~W~~~~~~~~~~--~~~wd~~~ 169 (268)
T cd08993 142 LSFSPDLVHWGNHRFVLSPR--PNHWEQLK 169 (268)
T ss_pred EEECCCcCccCCCeEEecCC--CCceeece
Confidence 99999999999877766432 23476543
No 14
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.83 E-value=2.5e-19 Score=178.89 Aligned_cols=192 Identities=15% Similarity=0.171 Sum_probs=138.1
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCC-CCcCCCcEEeeeEEEccCCeEEE
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd-~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
.||++||+ +++++|+||||++....+. ....|.+++|+||+||++++.+|.+. ..++..++|+++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 56899998 5788999999998765322 24679999999999999999998764 356778999999975 6899999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEE
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY 285 (494)
+||+. +.+++|+|+++. ..|++..++|++.... .....+||.|+ .+++|+|||++++. .++.++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998763 5788755678876432 23568999994 55789999999863 1222234
Q ss_pred EeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEE
Q 011094 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (494)
Q Consensus 286 ~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG 353 (494)
-|.|+.+|+.....+. .....+.|||.+|+.++ +++|..|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~~-~~~~~~~EgP~i~k~~G---------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGSE-ITPKNYFEGPFMFKRNG---------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceeee-ccCCCceecceEEEECC---------------EEEEEEECCCCCCCCceEE
Confidence 5788988875443321 11234899999999852 6677777543322234444
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.76 E-value=4.7e-17 Score=162.69 Aligned_cols=206 Identities=19% Similarity=0.161 Sum_probs=138.5
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-cCCCcEEeeeEEEccCCeEEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~-~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
+.+-||. +++++|+|+||+..... ..|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 4567997 88889999999985432 57999999999999999988877654 4567889888865 68999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCee---EE
Q 011094 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG---IS 282 (494)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G---~v 282 (494)
||+.... ..+.+++|+|+|.. ..|++....++. .+. .....+||.|+ .+++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~-~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLC-CPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEe-cCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceE
Confidence 9998652 34667889887752 579886433333 222 22467999995 4568999999986532211 12
Q ss_pred EEE-EeCCCCCCEEcCc-ccccC--CCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCcee--EEEEEEe-
Q 011094 283 LVY-QTTDFKTYELLDE-YLHAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD--HYAIGTY- 355 (494)
Q Consensus 283 ~lY-~S~Dl~~W~~~~~-ll~~~--~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~--~Y~iG~~- 355 (494)
.+. .|+|+.+|..... ++... ....++|||.+|+.+ .+++|..|....... .|.+|-.
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~---------------g~yyl~~S~~~~~~~~~~y~i~~~~ 214 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG---------------GYYYLFYSAGGCCSGASTYAVGVAR 214 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC---------------CEEEEEEEcCCccCCCCCEEEEEEE
Confidence 232 3789988864332 22211 123489999999985 267777776432221 4555432
Q ss_pred -cCCCCcccC
Q 011094 356 -NPANDKWTP 364 (494)
Q Consensus 356 -d~~~~~f~p 364 (494)
+...+.|+.
T Consensus 215 s~~~~Gpw~~ 224 (287)
T cd08999 215 SKSLLGPYVK 224 (287)
T ss_pred eCCCcCCcCC
Confidence 233456764
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.72 E-value=4e-16 Score=155.93 Aligned_cols=195 Identities=14% Similarity=0.157 Sum_probs=138.7
Q ss_pred CCccceEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEccCCeEEEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~---wg~~~WGHA~S~DLvhW~~~p~AL~Pd~--~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
||. +++++|+|+||......... .....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++||
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 897 78889999999987644332 2234589999999999999999887543 36788999999875 79999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEE
Q 011094 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (494)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~ 286 (494)
||+......+.+++|+|+|+. ..|++....|++...+ ......||.++ .+++|++||++++. .++.+.-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEEe
Confidence 999754345678899997752 5798865555554211 23467899994 55789999999864 34444556
Q ss_pred eCCCCCCEEcCccccc-----CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEE
Q 011094 287 TTDFKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (494)
Q Consensus 287 S~Dl~~W~~~~~ll~~-----~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG 353 (494)
|+|+.+|+.....+.. ....+..|+|.+|+.+ .+++|..|.+......|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------G~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN---------------GTYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC---------------CEEEEEEECCCCcEEEEEEc
Confidence 8899999765444321 1123478999999885 26777777654334445554
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.67 E-value=6.2e-15 Score=144.85 Aligned_cols=202 Identities=22% Similarity=0.191 Sum_probs=133.4
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
||. ++.++|+|+||+..... ....++.++|+||++|+..+.++. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 897 88899999999987542 234689999999999999998875 44455678899999975 679999999
Q ss_pred eccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC--CeeEEEE
Q 011094 208 TGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLV 284 (494)
Q Consensus 208 TG~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~--~~G~v~l 284 (494)
|+... ...+.+++|+|+|+ ..|.+....+ .+. ......+||.++ .+++|++||+.++... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~---~~~-~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKVIR---PPT-SNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccccC---cCc-cCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEEE
Confidence 99753 23467889999886 4555532211 111 123467899995 4567999999987532 2456777
Q ss_pred EEeCCCCCCEEcCcc-c-ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEEE--ecCCCC
Q 011094 285 YQTTDFKTYELLDEY-L-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT--YNPAND 360 (494)
Q Consensus 285 Y~S~Dl~~W~~~~~l-l-~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG~--~d~~~~ 360 (494)
+++++...|...... . .......+.|||.+|+.+ .+++|..|........|.++- -+...+
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~~y~~~~~~s~~~~G 210 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN---------------GYYYLTYSANGTGDYGYNIGYATSDSIDG 210 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEEC---------------CEEEEEEEeCCCCCCCceEEEEECCCCCC
Confidence 777665444322221 1 111233589999999975 267777776543223355543 333345
Q ss_pred cccC
Q 011094 361 KWTP 364 (494)
Q Consensus 361 ~f~p 364 (494)
.|+.
T Consensus 211 p~~~ 214 (271)
T cd08978 211 PYVK 214 (271)
T ss_pred CcCc
Confidence 5653
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.63 E-value=2.3e-14 Score=144.20 Aligned_cols=199 Identities=18% Similarity=0.148 Sum_probs=132.3
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEEEEEecc
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGS 210 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~~~YTG~ 210 (494)
||. +++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 897 88899999999876532 23578999999999999998887655 36778999999875 689999999997
Q ss_pred CCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCC---eeEEEEEE
Q 011094 211 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK---TGISLVYQ 286 (494)
Q Consensus 211 ~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~---~G~v~lY~ 286 (494)
... ..+.+++|+|+|+. ..|++....++ .. + ...+||.++ .++||+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778999998752 56877532222 21 1 346799995 45679999999864321 34544556
Q ss_pred eCCCCCCEEcCcc----ccc--------------CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCcee
Q 011094 287 TTDFKTYELLDEY----LHA--------------VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD 348 (494)
Q Consensus 287 S~Dl~~W~~~~~l----l~~--------------~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~ 348 (494)
+.|+.+|.-.... ... .....+.|+|.+++.+ .+++|..|.......
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~ 208 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN---------------GRYYLTYSANHYENE 208 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC---------------CEEEEEEECCCCCCC
Confidence 7888777521110 000 0112479999999985 267777775433222
Q ss_pred EEEEEE--ecCCCCccc
Q 011094 349 HYAIGT--YNPANDKWT 363 (494)
Q Consensus 349 ~Y~iG~--~d~~~~~f~ 363 (494)
.|.+|- -+...+.|+
T Consensus 209 ~y~~~~a~s~~~~gp~~ 225 (294)
T cd08991 209 DYGVGYATADSPLGPWT 225 (294)
T ss_pred CceEEEEEcCCCCCCcE
Confidence 344332 232235665
No 19
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.57 E-value=2e-13 Score=137.49 Aligned_cols=169 Identities=20% Similarity=0.155 Sum_probs=115.1
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-------CcCCCcEEeeeEEEccCCe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-------WYDINGVWTGSATILPDGQ 202 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~-------~~D~~Gv~SGSavv~~dG~ 202 (494)
+.||. +++++|+|+||+... .+++++|+||+||++.+.+|.+.. ..+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46997 889999999999864 589999999999999998876543 23467899999875 6999
Q ss_pred EEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeE
Q 011094 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (494)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~ 281 (494)
++||||+.... ..+.+++|+|+|.. ...|++. +||+...++......+||.++ .+++|++||+.++.. .|+
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~--~~i 141 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFW--GGI 141 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeecc--CCE
Confidence 99999987543 34667899998751 2689875 588765433233467899995 456899999998642 232
Q ss_pred EEEEE-eCC---CCCCEEcCc-ccccCCCCCceEeccEEEec
Q 011094 282 SLVYQ-TTD---FKTYELLDE-YLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 282 v~lY~-S~D---l~~W~~~~~-ll~~~~~~gmwECPdlf~l~ 318 (494)
. +.+ +.| ...|..... +.......+..|-|.+|+-+
T Consensus 142 ~-~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~ 182 (288)
T cd08998 142 F-LVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG 182 (288)
T ss_pred E-EEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC
Confidence 1 222 222 223321111 11111123468999999875
No 20
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.55 E-value=1.3e-13 Score=142.86 Aligned_cols=170 Identities=21% Similarity=0.275 Sum_probs=121.0
Q ss_pred ceeeeecCCC-cccCCccceEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEecCccCeeecceeccCCC-
Q 011094 119 TSFHFQPEKN-WMNDPNGPLFYKGWYHLFYQYNPD-----------SA--VWGNITWGHAVSADLIHWLYLPIAMVPDQ- 183 (494)
Q Consensus 119 p~~Hf~P~~g-wmNDPNG~~y~~G~YHLFYQ~nP~-----------~~--~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~- 183 (494)
|..=+.+..+ ...||..+++.+|+|||||++... .+ .|.....+||+|+||+||++.+.+|.+..
T Consensus 25 p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~~ 104 (349)
T cd08992 25 PKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGEK 104 (349)
T ss_pred cccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCCC
Confidence 4344444444 346998899999999999986431 11 24466789999999999999998886533
Q ss_pred -CcCCCcEEeeeEEEccCCeEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCC-----------
Q 011094 184 -WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR----------- 247 (494)
Q Consensus 184 -~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~----------- 247 (494)
.||..++|..+++ ..+|+++|+|++.... ..+.+++|+|+++. ..|++. .+||+.+..
T Consensus 105 g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~~ 178 (349)
T cd08992 105 GAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDNR 178 (349)
T ss_pred CCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCce
Confidence 5899999999986 5799999999975421 23568999998763 459985 689886521
Q ss_pred -------CCCCCCCCCCeeEeecCCCeEEEEEeeecC--------CeeEEEEEEeCCCC-CCEEc
Q 011094 248 -------HIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGISLVYQTTDFK-TYELL 296 (494)
Q Consensus 248 -------g~~~~~fRDP~V~w~~~dg~w~MviGa~~~--------~~G~v~lY~S~Dl~-~W~~~ 296 (494)
.++.....||.|+ . .+|+|||++.+... ..-++.|..|+++. -|+..
T Consensus 179 ~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 179 FLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1334456899995 3 58999999965321 11257788898864 46654
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.54 E-value=3.6e-13 Score=136.46 Aligned_cols=169 Identities=18% Similarity=0.223 Sum_probs=120.5
Q ss_pred ccCCccceEE--CCEEEEEEee-C---CCC-CCCC-CcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccC
Q 011094 130 MNDPNGPLFY--KGWYHLFYQY-N---PDS-AVWG-NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPD 200 (494)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~-n---P~~-~~wg-~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~d 200 (494)
.-||. ++++ +|+|||||.. . |.. ..|. ...+|+|+|+| |+||++++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 78998 8887 7899999942 1 111 2343 25799999999 99999999877665555667799999975 68
Q ss_pred CeEEEEEeccCC-----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 201 GQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 201 G~~~~~YTG~~~-----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
|+++|||+.... .....+++|+|+|. .+|++.+ ++... .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 12356788999884 7899863 33211 1245799994 44679999999643
Q ss_pred cCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 276 ~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
.. ...+.+..|+|+.+|+..+.++.. ..-|+|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~~----~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLGD----RPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCccccC----CCCCCCCeeEEC
Confidence 22 224567789999999987655431 134999999874
No 22
>PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides. ; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B.
Probab=99.50 E-value=1.7e-15 Score=132.05 Aligned_cols=97 Identities=41% Similarity=0.621 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH-HhhcCCCCCCCCC--CCCCCCCCCCCCCCCCCCccc
Q 011094 14 YPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI-INQTQKPLPSQNN--IVPTSKPTSFSNPEPRGVAEG 90 (494)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 90 (494)
|+|||+.+.+... ++.++||++|++++|++++++|++||+++ ++.++. +.... .......++...+.|||+++|
T Consensus 7 Y~PLP~~~~~~~~-~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~SRGv~~G 83 (106)
T PF11837_consen 7 YTPLPDSSESAPG-PGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQS--PDGSSVSSSSPPPSPETATPVSRGVSEG 83 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCcccCC-CCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccCC--CCccccccCCCCCCCccccCCCCCcccC
Confidence 9999875554332 23456788899999999999999999998 222211 11111 122334445555689999999
Q ss_pred ccccccccccccccCCCcCCcccc
Q 011094 91 VSAKSNSHLLRNIKGSYNWTNAMF 114 (494)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ 114 (494)
||||++....+. ..+|||+|+||
T Consensus 84 VSEKS~~~~~~~-~~~FpWtNaML 106 (106)
T PF11837_consen 84 VSEKSNGAGSGA-GNSFPWTNAML 106 (106)
T ss_dssp --------------------HHHH
T ss_pred cccccccCccCC-CCCCCCccccC
Confidence 999998874444 67899999996
No 23
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.48 E-value=1.1e-11 Score=124.02 Aligned_cols=197 Identities=18% Similarity=0.110 Sum_probs=131.6
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC----CcCCCcEEeeeEEEcc-CCeEEEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVML 206 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~----~~D~~Gv~SGSavv~~-dG~~~~~ 206 (494)
|+ ++++++|+|++|--....+.. ....|-..+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 45 488899999999876543211 124578889999999999999997754 3456689999998653 6999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEE
Q 011094 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (494)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY 285 (494)
|++...+ ....+++|+|++.. ..|+... .+. +.+ ...|||.++ .++||++||++++..+. + +.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf-~DdDG~~Yl~~~~~~~~-~-i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLF-VDDDGTAYLLYSDRDNS-D-LYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceE-EcCCCCEEEEEecCCCC-c-eEEE
Confidence 9986432 34678899998753 5677642 221 222 357999995 46789999999975322 2 3344
Q ss_pred E-eCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC---CceeEEEEEEecCCCCc
Q 011094 286 Q-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD---TKVDHYAIGTYNPANDK 361 (494)
Q Consensus 286 ~-S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~---~~~~~Y~iG~~d~~~~~ 361 (494)
+ ++|+..+.-. ... .......|||.+|+.+ .+++|..|... .....|++.+ ...+.
T Consensus 149 ~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~---------------g~YYL~~S~~t~~~~~~~~y~~s~--s~~GP 208 (265)
T cd08985 149 RLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN---------------GKYYLLTSGLTGWNPNDARYATAT--SILGP 208 (265)
T ss_pred EeCCCcccccce--EEE-ccCCCccccceEEEEC---------------CEEEEEEccCCCccCCceEEEEec--CCCCC
Confidence 4 4687777532 221 1123478999999985 26777777532 2345677665 22456
Q ss_pred ccC
Q 011094 362 WTP 364 (494)
Q Consensus 362 f~p 364 (494)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 663
No 24
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.40 E-value=8.3e-12 Score=123.17 Aligned_cols=158 Identities=21% Similarity=0.267 Sum_probs=109.2
Q ss_pred CcCCccccccccceeee--ecC----CCcccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec
Q 011094 107 YNWTNAMFTWQRTSFHF--QPE----KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf--~P~----~gwmNDPNG~~y~~-G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL 179 (494)
+..++....|.|..--+ .|. .+.+-||. +++.+ |+|||||..+... ......+++|+|+|++||+..+..+
T Consensus 37 ~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~ 114 (276)
T cd08979 37 AASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNP 114 (276)
T ss_pred EEEcCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCc
Confidence 34455566676655433 222 24466887 66777 9999999976432 2335789999999999999987554
Q ss_pred c-------CCCCcCCCcEEeeeEEEccC-CeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCC
Q 011094 180 V-------PDQWYDINGVWTGSATILPD-GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGP 251 (494)
Q Consensus 180 ~-------Pd~~~D~~Gv~SGSavv~~d-G~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~ 251 (494)
. +...++...+.+++++.+++ |+++|+|++........+.+|.|.|+ ++|++....+ ....+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~ 187 (276)
T cd08979 115 VPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDD 187 (276)
T ss_pred ceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccC
Confidence 2 22334556788999876544 89999999976545577889999885 8999874332 11222334
Q ss_pred CCCCCCeeEeecCCCeEEEEEeee
Q 011094 252 KDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 252 ~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
..+.+|.++ + .+|+|+|++++.
T Consensus 188 ~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 188 GQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CcCccceEE-E-ECCEEEEEEEec
Confidence 577899994 4 569999999875
No 25
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.39 E-value=3.8e-11 Score=119.62 Aligned_cols=183 Identities=20% Similarity=0.178 Sum_probs=125.9
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC--CCcE-EeeeEEEccCCeEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--INGV-WTGSATILPDGQIV 204 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D--~~Gv-~SGSavv~~dG~~~ 204 (494)
+..-||. ++..+|.|+||+...... ..+..++|+||+||+..+.++.+....+ ..+. |.++++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5678998 888999999999876543 4578999999999999998876654322 3333 999987 4799999
Q ss_pred EEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCC--eeEE
Q 011094 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGIS 282 (494)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~--~G~v 282 (494)
|+|+.........+.+|+|++.. ..|+... ...+. .....||.++ .+++|++||+.+..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEE-EecCCCcEEeCcccCCCccceeE
Confidence 99993333345668899998763 6888753 22222 2355799995 45679999999986432 3344
Q ss_pred EEEE-eCCCCCCEEcC-ccc-ccC--CCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC
Q 011094 283 LVYQ-TTDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (494)
Q Consensus 283 ~lY~-S~Dl~~W~~~~-~ll-~~~--~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~ 344 (494)
.+.+ +.|...+.... ... ... ......|+|.+|+.++ +++|..|...
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g---------------~yYl~~s~~~ 200 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHGG---------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEETT---------------EEEEEEEESG
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcCC---------------CEEEEEeccC
Confidence 4444 56777776554 222 211 2345899999999852 6777777543
No 26
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.37 E-value=5.5e-11 Score=119.91 Aligned_cols=168 Identities=21% Similarity=0.206 Sum_probs=109.3
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC--c----CCCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--Y----DINGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~--~----D~~Gv~SGSavv~~dG 201 (494)
+.+-||. ++.++|+|+||...... ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4678998 88899999998532211 234789999999999999988754321 1 346799999975 699
Q ss_pred eEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC----
Q 011094 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---- 277 (494)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~---- 277 (494)
+++|+|++........+.+|++++.. ..|+. |++.. ...+||.+++ +++|++||+.++...
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998754333456788887753 45652 33221 1568999954 578999999886421
Q ss_pred -CeeEEEEEEeCCCCCCEEcCcc--cccCCCCCceEeccEEEec
Q 011094 278 -KTGISLVYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 278 -~~G~v~lY~S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~ 318 (494)
..+.+.+.+. |...|+..+.. +.........|+|.+|+.+
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~ 186 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD 186 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC
Confidence 1233434433 33444443322 1111112468999999875
No 27
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.33 E-value=1.4e-10 Score=118.93 Aligned_cols=186 Identities=13% Similarity=0.220 Sum_probs=121.6
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCC---------CCCCcEEEEEEecCccCeeecceeccC--CCCcCCCcEEeeeEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSA---------VWGNITWGHAVSADLIHWLYLPIAMVP--DQWYDINGVWTGSAT 196 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~---------~wg~~~WGHA~S~DLvhW~~~p~AL~P--d~~~D~~Gv~SGSav 196 (494)
.+.-||. ++.++|+|+||....-... .+....+--.+|+||+||+.++.++.| ...| ..++|.++++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w-~~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW-AGNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc-ccccCCCceE
Confidence 4668998 6788999999987643221 122245778899999999999988863 2234 3478999997
Q ss_pred EccC----CeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC-CCCCCCC-CCCCeeEeecCCCeEEE
Q 011094 197 ILPD----GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKD-FRDPTTAWAGPDGKWRL 270 (494)
Q Consensus 197 v~~d----G~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-~g~~~~~-fRDP~V~w~~~dg~w~M 270 (494)
. .+ |+++|+|+.. ...+++|+|+++. ..|+...+.|++... ++..... -.||.+++ ++||++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 5 56 9999999864 2347899987753 679875456776532 2322122 36999954 57899999
Q ss_pred EEeeecC-----CeeEEEEEE-eCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 271 TIGSKIG-----KTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 271 viGa~~~-----~~G~v~lY~-S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
+.|+... ..+.+.+.+ ++|+..-. ++... ......+|.|.+++.+ .+++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~-i~~~~~~Egp~~~K~~---------------G~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVT-IDAPYFFEASGLHKIN---------------GTYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceecc--CCceE-ccCCCceEeeeEEEEC---------------CEEEEEEeCC
Confidence 9986321 112334444 45665432 22211 1112479999999875 2677777653
No 28
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.32 E-value=9.3e-12 Score=127.83 Aligned_cols=159 Identities=23% Similarity=0.247 Sum_probs=109.5
Q ss_pred cceEECCE--EEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccC
Q 011094 135 GPLFYKGW--YHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (494)
Q Consensus 135 G~~y~~G~--YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (494)
|++.++|. |||+|...-.. .+..+.|.|.|+|.+||+..+ +.|.|+..|+..||....++. .+|+++|+||+..
T Consensus 36 gai~~~~~~R~~l~yr~~~~~--~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGSD--IGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEESS--SSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECCC--CceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 45655665 89988654321 223479999999999999887 789999999999999999985 6899999999987
Q ss_pred CCccceEEEEEEcCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeC
Q 011094 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (494)
Q Consensus 212 ~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~---g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~ 288 (494)
..+ ..+++|.|+|. .+|+|.. +++.... ......-+|-..|-...+|+|+|+.+ .+.+.+..|+
T Consensus 113 ~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 644 56899999995 9999984 2222111 00011125555532246899999988 3457788999
Q ss_pred CCCCCEEcCc-ccccCCCCCceEe
Q 011094 289 DFKTYELLDE-YLHAVPGTGMWEC 311 (494)
Q Consensus 289 Dl~~W~~~~~-ll~~~~~~gmwEC 311 (494)
|+++|+.... ++.. ..++||+
T Consensus 180 Dl~~W~~~~~~~~~~--~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLSP--RPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB----STTSSCS
T ss_pred CcccccccccccccC--CCCcChh
Confidence 9999987665 4332 2356777
No 29
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.31 E-value=3.4e-10 Score=114.23 Aligned_cols=182 Identities=13% Similarity=0.072 Sum_probs=120.4
Q ss_pred CCcccCCccceEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEcc-CCe
Q 011094 127 KNWMNDPNGPLFY--KGWYHLFYQYNPDSAVW-GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP-DGQ 202 (494)
Q Consensus 127 ~gwmNDPNG~~y~--~G~YHLFYQ~nP~~~~w-g~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~-dG~ 202 (494)
.+-+.||. ++.. +|+||||+...-....+ +.....+++|+||+||+..+.++.... ...++|...++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35567998 7776 89999999754321112 346789999999999999887653221 24578999998765 799
Q ss_pred EEEEEeccCCC-----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC
Q 011094 203 IVMLYTGSTDK-----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (494)
Q Consensus 203 ~~~~YTG~~~~-----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~ 277 (494)
++|+|+..... ....+..|.+.| +.+|+.. .+++. ++ ....|+.++ . .+|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~p--~~~~~--~~---~~~ID~~v~-~-~~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTEP--KVWID--LG---ANVIDTTVV-K-VGGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCc-----ccccCCC--eEeec--CC---CCeEeeEEE-E-eCCEEEEEEecCCC
Confidence 99999987542 122233344335 3788752 45554 22 356799985 4 35999999865322
Q ss_pred CeeEEEEEEeCCCC-CCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeee
Q 011094 278 KTGISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL 342 (494)
Q Consensus 278 ~~G~v~lY~S~Dl~-~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~ 342 (494)
+.+.+.+|+++. .|+...... .......|-|.+|+..+. .+|+|..+.
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 446677899876 676654321 112236899999999631 367777654
No 30
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.25 E-value=5.7e-10 Score=115.96 Aligned_cols=190 Identities=18% Similarity=0.214 Sum_probs=122.3
Q ss_pred cCCccccccccceeeeecC-CC-c----ccCCccceEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-Ceeecc-ee
Q 011094 108 NWTNAMFTWQRTSFHFQPE-KN-W----MNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLP-IA 178 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~-~g-w----mNDPNG~~y~~G~YHLFYQ~nP~-~~~wg~~~WGHA~S~DLv-hW~~~p-~A 178 (494)
..+.....|+|-..=|.+. .+ | +.-|. +++++|+|||||+..-. ...-.+...|.|+|+|.. .|+++. +.
T Consensus 84 A~S~Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pi 162 (349)
T cd08992 84 ATSKDGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPI 162 (349)
T ss_pred EECCCCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcE
Confidence 3344556787766333221 21 2 34575 77889999999985321 111123567888888876 698765 45
Q ss_pred ccCCC------------------CcCCCcEEeeeEEEccCCeEEEEEeccCC-------CccceEEEEEEcCCCCCCcce
Q 011094 179 MVPDQ------------------WYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLD 233 (494)
Q Consensus 179 L~Pd~------------------~~D~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~d~lL~~ 233 (494)
|.|+. .||..+|...+++ ..+|+++|||+|+.. ...+.+++|+|+++. .-
T Consensus 163 l~p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GP 237 (349)
T cd08992 163 LSPSNDGIWKGDEDNRFLVKKKGSFDSHKVHDPCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GP 237 (349)
T ss_pred ecCCcCCceeeccCceeEeccCCCcccCceECCEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CC
Confidence 65642 2566777777765 579999999999752 134678999998874 67
Q ss_pred EEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeE-EEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEec
Q 011094 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECV 312 (494)
Q Consensus 234 W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w-~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECP 312 (494)
|+|.+.|||+..- + ..+| |.. .+.+ .|+..-. .+.|. +..|+|.++|+....+-......|..+||
T Consensus 238 f~r~~~nPi~~~~------~--~~~~-~~~-~~~~~~~~~~d~-~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~ 304 (349)
T cd08992 238 YVKSPYNPITNSG------H--ETCV-WQY-KGGIAAMLTTDG-PEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRP 304 (349)
T ss_pred CEeCCCCcccCCC------C--ceEE-Eec-CCceEEEEeccC-CCCce--EEeCCCCccEEEeeeccCCCccccCccCc
Confidence 9999899997531 2 2477 974 4556 5554432 23354 56799999999876554322234556677
Q ss_pred cEEE
Q 011094 313 DFYP 316 (494)
Q Consensus 313 dlf~ 316 (494)
|-+.
T Consensus 305 ~~~~ 308 (349)
T cd08992 305 DADE 308 (349)
T ss_pred cccc
Confidence 6544
No 31
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.21 E-value=1.2e-09 Score=111.04 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=94.3
Q ss_pred CcccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEE
Q 011094 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIV 204 (494)
Q Consensus 128 gwmNDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~ 204 (494)
.++-||. ++++ +|+||||..............+.+.+|+||+||+..+.++.+.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578997 7787 99999999754322101123579999999999999998886543 3445689999986 5799999
Q ss_pred EEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 205 MLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
|+|+..... ....+.+|++++.. ..|+.....|+... + ....||.+ |.++||++||+.+.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCce-EEcCCCCEEEEEEe
Confidence 999876433 22346788887652 56887543444221 1 23479998 45678999999874
No 32
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.15 E-value=3e-09 Score=107.12 Aligned_cols=169 Identities=18% Similarity=0.194 Sum_probs=105.7
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCeEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQIV 204 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~-------D~~Gv~SGSavv~~dG~~~ 204 (494)
||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|...++. .+|+++
T Consensus 2 DP~-vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yy 70 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKFY 70 (279)
T ss_pred CCE-EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEEE
Confidence 897 788899999987531 36789999999999999888543322 246899999864 689999
Q ss_pred EEEeccCCC-ccceEEEEEEcCCCCCC-cceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEE
Q 011094 205 MLYTGSTDK-SVQVQNLAYPADPSDPL-LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGIS 282 (494)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~d~l-L~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v 282 (494)
|||++.... ..+.+++|+|++...|- -..|++ ..+++..... ....-.||.+++ ++||++||+.|+.. .|+
T Consensus 71 lyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~gi- 143 (279)
T cd08988 71 LYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--GGI- 143 (279)
T ss_pred EEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEecccC--CCE-
Confidence 999986532 24677899998764220 012443 2455543211 112347999955 57899999998632 232
Q ss_pred EEEE-eCCCCCCEEcCc---ccccCCCCCceEeccEEEec
Q 011094 283 LVYQ-TTDFKTYELLDE---YLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 283 ~lY~-S~Dl~~W~~~~~---ll~~~~~~gmwECPdlf~l~ 318 (494)
.+.+ +.|...-...+. +..........|-|-+++-+
T Consensus 144 ~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~ 183 (279)
T cd08988 144 KLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG 183 (279)
T ss_pred EEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC
Confidence 2222 445443211111 11111112367999998874
No 33
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.05 E-value=1.4e-08 Score=101.78 Aligned_cols=125 Identities=18% Similarity=0.141 Sum_probs=88.3
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~------D~~Gv~SGSavv~~dG 201 (494)
+..-||. ++.++|.|+||+..... .......+|+||+||+..+.++...... ...++|...++. .+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECC
Confidence 5567998 88899999999853211 1235678999999999988776542211 245799999864 799
Q ss_pred eEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
+++|+|+.........+.+|++++.. ..|+. |+... ..-.||.++ .++||+.||+.|+
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f-~D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLF-HDDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceE-EcCCCCEEEEecC
Confidence 99999998754334567889887653 34653 33321 134799995 4579999999875
No 34
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.99 E-value=3.1e-08 Score=99.88 Aligned_cols=190 Identities=14% Similarity=0.091 Sum_probs=115.9
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec--cCCCC-cCCCcEEeeeEEEccCCeEEEEEe
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQW-YDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL--~Pd~~-~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
||. ++.+++.|+||+.-.. .....++|+||+||+.....+ .+... ....++|...+.. .+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEE
Confidence 897 7888899999986331 347889999999999875332 23221 3456899999864 7999999999
Q ss_pred ccCC--CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC---CeeEEE
Q 011094 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---KTGISL 283 (494)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~---~~G~v~ 283 (494)
.... ...+.+++|.+++..++ +..|+.. .+++... + ..-.||.++ .+ +|++||+++.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEE
Confidence 8754 23456678887753223 3689874 3443211 1 123699995 43 5999999875421 122344
Q ss_pred EEEeCCCCCCEEcCcccccCC------CCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEEE
Q 011094 284 VYQTTDFKTYELLDEYLHAVP------GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT 354 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~ll~~~~------~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG~ 354 (494)
+.+.++...+.-....+.... +....|-|.+++.+ .+++|..|........|.+|-
T Consensus 144 ~~~l~~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~---------------G~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 144 IAKMSNPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRN---------------GKVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEECCCCCccCCcceEecCCCCCceecCceeeECcEEEEEC---------------CEEEEEEECCCCCCCCCEEEE
Confidence 455444333321111111110 11356888888875 267777776544344566654
No 35
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=98.98 E-value=4.4e-08 Score=98.26 Aligned_cols=159 Identities=17% Similarity=0.140 Sum_probs=102.8
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-----------cCCCcEEeeeEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-----------YDINGVWTGSAT 196 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~-----------~D~~Gv~SGSav 196 (494)
+..-||. +++++|+|++|....-. ...+...+|+||+||+..+.++..... .-..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 4557998 88889999999864211 123567899999999999877643211 013579999986
Q ss_pred EccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec
Q 011094 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~ 276 (494)
. .+|+++|+|+... ..+.+|++++.. ..|+.. .++ ....||.+++ ++||+.||+.++.
T Consensus 83 ~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEE-cCCCCEEEEeCCC-
Confidence 5 6999999999862 346788887642 456543 111 1457999954 5789999998753
Q ss_pred CCeeEEEEEE-eCCCCCCEEcC-cccccCC-CCCceEeccEEEec
Q 011094 277 GKTGISLVYQ-TTDFKTYELLD-EYLHAVP-GTGMWECVDFYPVA 318 (494)
Q Consensus 277 ~~~G~v~lY~-S~Dl~~W~~~~-~ll~~~~-~~gmwECPdlf~l~ 318 (494)
+ +.+.+ +.|+....-.. .++.... .....|-|.+++-+
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~ 181 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN 181 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC
Confidence 2 22333 56766652111 1222111 12467999999764
No 36
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.91 E-value=5.7e-08 Score=97.54 Aligned_cols=168 Identities=17% Similarity=0.123 Sum_probs=103.0
Q ss_pred cccCCccceEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEecCccCeeecceeccCCCC------------cCCCcE
Q 011094 129 WMNDPNGPLFY-KGWYHLFYQYNPDSA----VW-GNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGV 190 (494)
Q Consensus 129 wmNDPNG~~y~-~G~YHLFYQ~nP~~~----~w-g~~~WGHA~S~DLvhW~~~p~AL~Pd~~------------~D~~Gv 190 (494)
||-||. ++.. +|+|+|+......+. .| .....-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688998 5655 679999987442211 01 1234668999999999999877754321 235679
Q ss_pred EeeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCC-ceecCCCCCCCCCCCCCeeEeecCCCeE
Q 011094 191 WTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGN-PVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (494)
Q Consensus 191 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~n-PVi~~p~g~~~~~fRDP~V~w~~~dg~w 268 (494)
|...+.. .+|+++|+|+..... ....+.+|++++.. ..|+..... ++ ..-.||.+ |.++||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 9999864 689999999976432 23456778776542 467764322 11 12469999 45678999
Q ss_pred EEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccC----CCCCceEeccEEEec
Q 011094 269 RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV----PGTGMWECVDFYPVA 318 (494)
Q Consensus 269 ~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~----~~~gmwECPdlf~l~ 318 (494)
||+.++. .+ .--+.|+....-....+... ......|-|-+++.+
T Consensus 145 Yl~~~~~----~i--~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~ 192 (269)
T cd08986 145 YLVWHNT----LI--ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG 192 (269)
T ss_pred EEEeeCC----ce--EeccCccccccCCcEEEecccccccCCccccccEEEEEC
Confidence 9998753 11 11245655432111111111 011246888888864
No 37
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.89 E-value=1.2e-08 Score=101.82 Aligned_cols=99 Identities=23% Similarity=0.335 Sum_probs=75.9
Q ss_pred eeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC--CCCCCCCCCCCeeEeecCCCeEEE
Q 011094 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRL 270 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p--~g~~~~~fRDP~V~w~~~dg~w~M 270 (494)
..++ ..||+++|+|++........+++|+|.|+ ++|++.+ +|++.++ ...+...++||.|+ + .+|+|+|
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 3454 47999999999876555678999999995 8999975 5555442 23445678999995 3 5889999
Q ss_pred EEeeec--CCeeEEEEEEeCCCCCCEEcCccc
Q 011094 271 TIGSKI--GKTGISLVYQTTDFKTYELLDEYL 300 (494)
Q Consensus 271 viGa~~--~~~G~v~lY~S~Dl~~W~~~~~ll 300 (494)
++++.. .....+.+++|+|+.+|+..+..+
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~~ 105 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTSL 105 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEecccC
Confidence 998864 344578899999999999987543
No 38
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.84 E-value=1.6e-07 Score=99.39 Aligned_cols=183 Identities=20% Similarity=0.200 Sum_probs=115.2
Q ss_pred cCCccceE-ECCEEEEEEeeCCCC----CCCCCcEEEEEEecCcc----CeeecceeccCCCCc-CCCcEEeeeEEEcc-
Q 011094 131 NDPNGPLF-YKGWYHLFYQYNPDS----AVWGNITWGHAVSADLI----HWLYLPIAMVPDQWY-DINGVWTGSATILP- 199 (494)
Q Consensus 131 NDPNG~~y-~~G~YHLFYQ~nP~~----~~wg~~~WGHA~S~DLv----hW~~~p~AL~Pd~~~-D~~Gv~SGSavv~~- 199 (494)
-|+.|-+. ++|+.-+|-.-.+.. ..|+..++++.-|++.. +|++.+.++...... ....-|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 35556444 699777777766654 24567899999999999 999999877554431 23457999999987
Q ss_pred CCeEEEEEeccCC----CccceE-----EEEEEcCCCCCCcceEEEcCCCceecCCCCCC--------CCCCCCCeeEee
Q 011094 200 DGQIVMLYTGSTD----KSVQVQ-----NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG--------PKDFRDPTTAWA 262 (494)
Q Consensus 200 dG~~~~~YTG~~~----~~~q~q-----~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~--------~~~fRDP~V~w~ 262 (494)
||++.+|||.... ...|.. +++...+. ..-+..|+++ ..++. +.|.. ...||||++ |.
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~-f~ 217 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHV-FE 217 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEE-EE
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeec-cchhhhhChhhcCCccccCCee-EE
Confidence 8999999999542 222222 23333332 1223455554 34554 33321 257999999 55
Q ss_pred c-CCCeEEEEEeeec-------------------------C--------CeeEEEEEEeCC--CCCCEEcCcccccCCCC
Q 011094 263 G-PDGKWRLTIGSKI-------------------------G--------KTGISLVYQTTD--FKTYELLDEYLHAVPGT 306 (494)
Q Consensus 263 ~-~dg~w~MviGa~~-------------------------~--------~~G~v~lY~S~D--l~~W~~~~~ll~~~~~~ 306 (494)
+ .+|+-||+.-+.. . ..|+|.+.+.+| +..|++.++|+++..-.
T Consensus 218 DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~ 297 (428)
T PF02435_consen 218 DPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVN 297 (428)
T ss_dssp ETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTB
T ss_pred CCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccc
Confidence 4 5888888874320 0 267888887654 57899999999875555
Q ss_pred CceEeccEEEec
Q 011094 307 GMWECVDFYPVA 318 (494)
Q Consensus 307 gmwECPdlf~l~ 318 (494)
.+.|-|+++.++
T Consensus 298 de~ERP~iv~~~ 309 (428)
T PF02435_consen 298 DELERPHIVFMN 309 (428)
T ss_dssp S-EEEEEEEEET
T ss_pred ccccCCcEEEEC
Confidence 689999999996
No 39
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.78 E-value=3.7e-07 Score=93.11 Aligned_cols=109 Identities=26% Similarity=0.423 Sum_probs=74.5
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEec
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG 209 (494)
.-||. ++.++|+|+||-... + +..+|+||+||+..+.++. ..++|..++.. .+|++|++|+.
T Consensus 3 ~~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 3 AADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 36997 788899999886542 1 3688999999999987653 46799999864 78987766654
Q ss_pred cCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 210 ~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
. .+.+|+|+|.. .-.|+.. .+ . ......||.++ .++||++||+.|+.
T Consensus 65 ~------~~~v~~s~~p~---gp~w~~~--~~----~---~~~~~IDp~vf-~DdDGk~Yl~~g~~ 111 (295)
T cd08982 65 Y------NSRIYKTADPL---SGPWEEV--DK----S---FPPGLADPALF-IDDDGRLYLYYGCS 111 (295)
T ss_pred C------CceEEEeCCCC---CCCcccc--cc----c---cCCCccCCceE-ECCCCCEEEEEecC
Confidence 2 13467777652 1235442 01 0 11235799995 45789999998753
No 40
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.77 E-value=2.7e-07 Score=92.51 Aligned_cols=154 Identities=18% Similarity=0.136 Sum_probs=99.8
Q ss_pred cCCccccccccceeeeecCCCc-----ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc--eecc
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNW-----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP--IAMV 180 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gw-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p--~AL~ 180 (494)
..+..+..|++-..-+.|+.++ +-.|+ +++.+|+|||||..+... .......++|+|+|+++|+..+ +.+.
T Consensus 35 a~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~ 112 (280)
T cd08995 35 LTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIA 112 (280)
T ss_pred EEccCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecC
Confidence 3355567787666666663322 33454 566789999999865322 1124568999999999999875 3343
Q ss_pred CCCCcCCCcEEeeeEEEcc-CCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCC
Q 011094 181 PDQWYDINGVWTGSATILP-DGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR 255 (494)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~-dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fR 255 (494)
+...++...+-...++.+. +|+++|+|.+... .....+.++.|+|. ++|+.. .+++.+.. ...+-
T Consensus 113 ~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E 182 (280)
T cd08995 113 DGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPE 182 (280)
T ss_pred CccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceee
Confidence 2333444445567776543 5999999987643 23345677888874 899876 45553321 12456
Q ss_pred CCeeEeecCCCeEEEEEeee
Q 011094 256 DPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 256 DP~V~w~~~dg~w~MviGa~ 275 (494)
-|.+ ++ .+|+|+|+++..
T Consensus 183 ~P~l-~~-~~g~~~L~~s~~ 200 (280)
T cd08995 183 CPDL-FK-MGDWWYLVYSEF 200 (280)
T ss_pred cceE-EE-ECCEEEEEEEec
Confidence 7888 44 679999999865
No 41
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.77 E-value=1e-07 Score=96.29 Aligned_cols=122 Identities=18% Similarity=0.205 Sum_probs=86.1
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
+..-||. +++.+|+|+|+..-.. + .......+|+||+||+..+.++.+. ..++|...++ ..+|+++|+|
T Consensus 13 ~~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yy 81 (280)
T cd09002 13 GDYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYF 81 (280)
T ss_pred CCCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEE
Confidence 3445996 8888999999765211 1 1246788999999999988877542 4579999886 4899999999
Q ss_pred eccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 208 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 208 TG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
+.......+.+.+|++++.. ..|++ |+... .....||.+++ ++||++||+.+.
T Consensus 82 s~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 82 PAIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred EeecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 98764445667889887653 45754 22111 11236999965 578999999864
No 42
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.72 E-value=1.3e-07 Score=95.23 Aligned_cols=108 Identities=25% Similarity=0.334 Sum_probs=81.5
Q ss_pred cCCccceEECCEEEEEEeeCCCC----CCCCCcEEEEEEecC-ccCeeec-ceeccCCC-CcCCCcEEeeeEEEccCCeE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSAD-LIHWLYL-PIAMVPDQ-WYDINGVWTGSATILPDGQI 203 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~----~~wg~~~WGHA~S~D-LvhW~~~-p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~ 203 (494)
-+|. +++++|+|+|||..+... ...++...|.|+|+| +-+|+.+ .++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 3676 677899999999876431 112356799999999 4699984 46676654 36788899999987558999
Q ss_pred EEEEeccCCC---ccceEEEEEEcCCCCCCcceEEEcCCCcee
Q 011094 204 VMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243 (494)
Q Consensus 204 ~~~YTG~~~~---~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi 243 (494)
+|+|+|+... ..+.|++|+|+|.. ..|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998632 35778999998863 579998666664
No 43
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.72 E-value=1.4e-07 Score=95.46 Aligned_cols=147 Identities=22% Similarity=0.269 Sum_probs=110.8
Q ss_pred cceEECCEEEEEEee------CCCCCCCCCcEEEEEEecCccC-eeecc-eeccC-CCCcCCCcEEeeeEEEccCCeEEE
Q 011094 135 GPLFYKGWYHLFYQY------NPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVP-DQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 135 G~~y~~G~YHLFYQ~------nP~~~~wg~~~WGHA~S~DLvh-W~~~p-~AL~P-d~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
|+++.+|++||+|+- .+. .-.+.+-|.|+|.++ |+..+ +.+.| ..+++.-||.+..++. .||+++|
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~m 109 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYM 109 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEE
Confidence 578889999999986 222 346788999999999 99777 77889 5578889999999975 7999999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CC--eeEE
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GK--TGIS 282 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~--~G~v 282 (494)
.|||.+.. .+..++|+++|. .+|+|.+ +++. | ++||-.++=...+|+|.|+---.. +. .+-+
T Consensus 110 tYTa~s~~-g~~~~la~t~~f-----~n~~rig--~i~~-p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ni 174 (314)
T COG2152 110 TYTAYSDK-GPRLALAVTKDF-----LNWERIG--AIFP-P------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNI 174 (314)
T ss_pred EEEecCCC-Ccccchhhhhhh-----hhhhhcc--cccC-C------CCCCceEeeEEecCcEEEEEeecccccCccCce
Confidence 99998654 477899999985 7899972 3332 2 446655521134789998865332 11 4678
Q ss_pred EEEEeCCCCCCEEcCcccc
Q 011094 283 LVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 283 ~lY~S~Dl~~W~~~~~ll~ 301 (494)
.+..|.|+.+|.....++.
T Consensus 175 wia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 175 WIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred EEEEcCCccCCCccceeec
Confidence 8999999999998755553
No 44
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.71 E-value=7.4e-07 Score=90.24 Aligned_cols=208 Identities=17% Similarity=0.326 Sum_probs=131.1
Q ss_pred ccccceeeeecCCCc---ccCCccceEECCEEEEEEeeCCCCCCCCCcEEE-EEEecCccCeeecceecc----CCCCcC
Q 011094 115 TWQRTSFHFQPEKNW---MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWG-HAVSADLIHWLYLPIAMV----PDQWYD 186 (494)
Q Consensus 115 ~w~Rp~~Hf~P~~gw---mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WG-HA~S~DLvhW~~~p~AL~----Pd~~~D 186 (494)
+|.-..--.+|..|| +.||- +++++|+||+|-..... . .|+ ...| |+||+.++-|+. +.. .
T Consensus 6 ~w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-~-----~~~s~~~S--f~~Ws~~g~A~q~~l~~~~--~ 74 (303)
T cd08987 6 RWTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-G-----NYGSMYFN--FTDWSQAASATQYYLQNGN--M 74 (303)
T ss_pred eeccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-C-----Cceeeeec--ccCHhHhccchhhcccCCC--C
Confidence 343344456788899 88997 77888999999775431 1 243 3445 999998887652 221 2
Q ss_pred CCcEEeeeEEE-ccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCC
Q 011094 187 INGVWTGSATI-LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (494)
Q Consensus 187 ~~Gv~SGSavv-~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~d 265 (494)
..+.|...+.. .+++++||+|+-. ..+.|+|.|..+| -.|... .|++...........-|++|+ .++
T Consensus 75 ~~~fwAPqVfyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~vI--~Dd 142 (303)
T cd08987 75 TGYRVAPQVFYFAPQNKWYLIYQWW------PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWVI--CDD 142 (303)
T ss_pred CcccccCEEeeeccCCEEEEEEecC------ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeEE--eCC
Confidence 44678888752 5789999999951 2568899888776 467654 566653222233456899995 467
Q ss_pred CeEEEEEeeecCCeeEEEEEEeC----CCCC--CEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEE
Q 011094 266 GKWRLTIGSKIGKTGISLVYQTT----DFKT--YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLK 339 (494)
Q Consensus 266 g~w~MviGa~~~~~G~v~lY~S~----Dl~~--W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~ 339 (494)
++.||+... ..| .+|+|+ ||-. .+.. .+..........|-|+++++.+ +.+++|.
T Consensus 143 ~~~YLff~~---dnG--~iyra~~~~~nFp~~~~~~~-~~~~~~~~~~lfEa~~Vykv~G-------------~~~Ylmi 203 (303)
T cd08987 143 TNCYLFFSD---DNG--KLYRSSTTLGNFPNGGTETV-IIMSDSNKNNLFEASNVYKVKG-------------QNQYLLI 203 (303)
T ss_pred CCEEEEEec---CCC--eEEEEecchhhCCCCCCccE-EEecCCCccccceeeEEEEECC-------------CeEEEEE
Confidence 888888743 234 367763 2322 1111 1121111224799999999963 2378888
Q ss_pred eeeCCCceeEEEEEEe--cCCCCcccCC
Q 011094 340 ASLDDTKVDHYAIGTY--NPANDKWTPD 365 (494)
Q Consensus 340 ~s~~~~~~~~Y~iG~~--d~~~~~f~p~ 365 (494)
++..+..+..|+++ + +--.|.|+|.
T Consensus 204 veA~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 204 VEAIGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred EEecCCCCCCeEEE-EEcCCCCCCceec
Confidence 88776544457777 3 3335688864
No 45
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.64 E-value=9.3e-07 Score=86.87 Aligned_cols=156 Identities=17% Similarity=0.140 Sum_probs=97.4
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
.+-+.+|. +++++|+|+|||.....+ ......+.|+|+|+.+|........+ .....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~--~~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP--TSNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC--ccCCCCccCcceEEcCCCCEEEE
Confidence 45677897 889999999999987542 23456899999999999765421111 11245678899988777999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec--CCeeEEE
Q 011094 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTGISL 283 (494)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~--~~~G~v~ 283 (494)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ ++ .+|+|+|++.+.. ...-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEE
Confidence 9876421 1234566666553 22222 123321111111224568998 44 5799999987642 2233566
Q ss_pred EEEeCCCC-CCEEc
Q 011094 284 VYQTTDFK-TYELL 296 (494)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (494)
+++|++.. -|+..
T Consensus 202 ~~~s~~~~Gp~~~~ 215 (271)
T cd08978 202 YATSDSIDGPYVKK 215 (271)
T ss_pred EEECCCCCCCcCcC
Confidence 77888763 35544
No 46
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.60 E-value=1.3e-06 Score=87.33 Aligned_cols=172 Identities=16% Similarity=0.149 Sum_probs=103.0
Q ss_pred cccccccceeeeecCCC-----cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeeccee-cc-CCC
Q 011094 112 AMFTWQRTSFHFQPEKN-----WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MV-PDQ 183 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P~~g-----wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~A-L~-Pd~ 183 (494)
++..|.+...-+.+... -+..|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+.. +. +.
T Consensus 39 Dl~~W~~~g~~l~~~~~~~~~~~~waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~- 114 (287)
T cd08999 39 DLVNWTYLGDAFPKLPRWWTGGDFWAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPE- 114 (287)
T ss_pred CCCCcEECCcccCCCCCcccCCCccCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCC-
Confidence 35566554433333332 234564 788899999999866433 235678999999965 89877532 22 22
Q ss_pred CcCCCcEEeeeEEEccCCeEEEEEeccCCC--ccceEEEE-EEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 184 WYDINGVWTGSATILPDGQIVMLYTGSTDK--SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 184 ~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~--~~q~q~lA-~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
+..+....++++++||+++|+|.+.... ..+.+.++ .+.|+ .+|+... ..++.+........+--|.++
T Consensus 115 --~~~~~~Dp~v~~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i~ 186 (287)
T cd08999 115 --GEGGAIDPSFFTDTDGKRYLVWKSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYLV 186 (287)
T ss_pred --CCCCccCCCeEECCCCCEEEEEeccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEEE
Confidence 2345677888877799999999764322 11224444 44443 5665321 223332222222345578884
Q ss_pred eecCCCeEEEEEeeec--CC--eeEEEEEEeCCCC-CCEEcC
Q 011094 261 WAGPDGKWRLTIGSKI--GK--TGISLVYQTTDFK-TYELLD 297 (494)
Q Consensus 261 w~~~dg~w~MviGa~~--~~--~G~v~lY~S~Dl~-~W~~~~ 297 (494)
+ .+|+|||++.+.. .. .=.+.+++|+|+. .|+..+
T Consensus 187 -k-~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 187 -K-RGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYVKAP 226 (287)
T ss_pred -E-ECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcCCCC
Confidence 4 5899999997642 11 2246678999976 787654
No 47
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.53 E-value=2.7e-06 Score=83.82 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=99.7
Q ss_pred CcccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccC-eeecc-eeccCCC--CcCCCcEEeeeEEEccCCe
Q 011094 128 NWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVPDQ--WYDINGVWTGSATILPDGQ 202 (494)
Q Consensus 128 gwmNDPNG~~y~~-G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvh-W~~~p-~AL~Pd~--~~D~~Gv~SGSavv~~dG~ 202 (494)
+-+-.|. +++++ |+|+|||..... ..+....+.|+|+|+.. |+... ..+.+.. ..+...+..++++.++||+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 3455776 67777 999999986543 22356789999999976 55432 1122221 2234467889998776799
Q ss_pred EEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec----CC
Q 011094 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GK 278 (494)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~----~~ 278 (494)
++|+|.+........+.+|.|+|. .+|++.+..+++.... ....+--|.++ + .+|+|+|++.+.. +.
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCC
Confidence 999998865433456889999885 7888753222222211 22356789994 3 5799999998653 22
Q ss_pred eeEEEEEEeCC-CCCCEEc
Q 011094 279 TGISLVYQTTD-FKTYELL 296 (494)
Q Consensus 279 ~G~v~lY~S~D-l~~W~~~ 296 (494)
.-.+.+++|++ .-.|+..
T Consensus 206 ~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 206 TYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CcceEEEEccCCCCCcccC
Confidence 22455667765 3445543
No 48
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.47 E-value=6e-06 Score=83.23 Aligned_cols=154 Identities=15% Similarity=0.144 Sum_probs=90.9
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
.+-.|. +++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. .....++++.++||+++|+|
T Consensus 54 ~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~ 126 (294)
T cd08991 54 GFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYY 126 (294)
T ss_pred cEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEE
Confidence 344786 888999999999866432 134678999999977 6887654333321 34567888888789999999
Q ss_pred eccCCCc--cceEEEEEEcCCCCCCcceEEEcCC---CceecC-------CCC----CCCCCCCCCeeEeecCCCeEEEE
Q 011094 208 TGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPG---NPVLVP-------PRH----IGPKDFRDPTTAWAGPDGKWRLT 271 (494)
Q Consensus 208 TG~~~~~--~q~q~lA~S~D~~d~lL~~W~K~~~---nPVi~~-------p~g----~~~~~fRDP~V~w~~~dg~w~Mv 271 (494)
+...... ...+..+.+.|. .+|..... .++..+ +.. .+..-.--|.++ + .+|+|||+
T Consensus 127 ~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yyl~ 199 (294)
T cd08991 127 SRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYYLT 199 (294)
T ss_pred EecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEEEE
Confidence 8754321 223344556553 45542111 122111 000 011123457773 3 57999999
Q ss_pred Eeeec-CCee-EEEEEEeCC-CCCCEEc
Q 011094 272 IGSKI-GKTG-ISLVYQTTD-FKTYELL 296 (494)
Q Consensus 272 iGa~~-~~~G-~v~lY~S~D-l~~W~~~ 296 (494)
..+.. .... .+.+.+|++ +-.|+..
T Consensus 200 ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 200 YSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 86532 1111 355667876 4678764
No 49
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.44 E-value=5.9e-06 Score=82.75 Aligned_cols=152 Identities=15% Similarity=0.070 Sum_probs=94.2
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeecce-eccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPI-AMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~-AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+--|. +++++|+|||||..... .+....|+|+|+|.. .|+.... .+.+ ...+......++++++.||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 4455687 88899999999987543 234678999999976 7998763 3332 22234456788888877899999
Q ss_pred EEeccCCCccceEEEE-EEcCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeE
Q 011094 206 LYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA-~S~D~~d~lL~~W~K~~~nPVi~~p~---g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~ 281 (494)
+|.+. +.+.++ .+.| +.+|+.. ..++..+. .....-+--|.+ ++ .+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcE
Confidence 99864 223444 3334 3666532 22332111 001112346888 44 6899999987642 345
Q ss_pred EEEEEeCCCC-CCEEcCccc
Q 011094 282 SLVYQTTDFK-TYELLDEYL 300 (494)
Q Consensus 282 v~lY~S~Dl~-~W~~~~~ll 300 (494)
+.+.+|+++. -|+..+.++
T Consensus 201 ~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 201 IAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEEcCCCCCCcccCcEEe
Confidence 5566787764 465544443
No 50
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.41 E-value=3.6e-06 Score=84.98 Aligned_cols=157 Identities=17% Similarity=0.149 Sum_probs=99.5
Q ss_pred CcCCccccccccceeeeecCCCc----ccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEec-CccCeeeccee-c
Q 011094 107 YNWTNAMFTWQRTSFHFQPEKNW----MNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSA-DLIHWLYLPIA-M 179 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf~P~~gw----mNDPNG~~y~~-G~YHLFYQ~nP~~~~wg~~~WGHA~S~-DLvhW~~~p~A-L 179 (494)
+.-+..++.|++..-=+.|...+ +-.++ ++.++ |+|+|||.-+......+...-++|+|+ |+++|+..+.. +
T Consensus 36 ha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGs-av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~ 114 (298)
T cd08996 36 HATSKDLVHWEHLPVALAPDDPYDSGGCFSGS-AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPV 114 (298)
T ss_pred EEEecCccceeECCcccCCCCcccCCeEEeCe-EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCce
Confidence 34455677786655445552222 12233 34456 999999986532211234667999999 89999987622 2
Q ss_pred cCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCee
Q 011094 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259 (494)
Q Consensus 180 ~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V 259 (494)
.+....+..++-...++. .+|+++|+|++...+....+.++.|+|+ ++|++. .++.... +.....+-.|.+
T Consensus 115 ~~~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l 185 (298)
T cd08996 115 IPPPDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDL 185 (298)
T ss_pred EcCCCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcE
Confidence 211222345667888865 5699999999876544566788999885 899986 3442211 112245678998
Q ss_pred EeecCC--CeEEEEEeee
Q 011094 260 AWAGPD--GKWRLTIGSK 275 (494)
Q Consensus 260 ~w~~~d--g~w~MviGa~ 275 (494)
++ -+ ++|+|+++..
T Consensus 186 -~~-l~~~~k~vL~~s~~ 201 (298)
T cd08996 186 -FP-LDVEGKWVLIFSPQ 201 (298)
T ss_pred -EE-ECCCCeEEEEECCC
Confidence 44 46 9999999865
No 51
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.34 E-value=2e-05 Score=79.41 Aligned_cols=153 Identities=17% Similarity=0.159 Sum_probs=91.1
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DL--vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+..|. +++.+|+|||||..+..+. ++...++|+|+|+ -.|+..++.+.++.......+..+++++++||+++|
T Consensus 56 ~~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl 132 (288)
T cd08998 56 GNLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWL 132 (288)
T ss_pred CCccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEE
Confidence 3455676 7788999999998764321 2456899999998 799988766655433233457788998877999999
Q ss_pred EEeccCCCccceEEEEE-EcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee-cC---Cee
Q 011094 206 LYTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IG---KTG 280 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~-S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~-~~---~~G 280 (494)
+|.+... .+.++. +.|.+.+ ..+... ...++..+.+ ....-.|++ ++ .+|.|||++.+. .. ..+
T Consensus 133 ~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~ 201 (288)
T cd08998 133 SFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDST 201 (288)
T ss_pred EeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCc
Confidence 9975422 123332 2232211 222110 0112221111 112357888 44 689999998643 11 122
Q ss_pred -EEEEEEeCCCC-CCE
Q 011094 281 -ISLVYQTTDFK-TYE 294 (494)
Q Consensus 281 -~v~lY~S~Dl~-~W~ 294 (494)
++.+++|+++. -|+
T Consensus 202 y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 202 YNIRVGRSKSITGPYV 217 (288)
T ss_pred eEEEEEEcCCCCCCcC
Confidence 56788998853 344
No 52
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.32 E-value=6.2e-06 Score=82.88 Aligned_cols=121 Identities=14% Similarity=0.090 Sum_probs=70.9
Q ss_pred CCCCeeEeecCCCeEEEEEeeecC---------CeeEEEEEEeCCCCCCEEcCcccccCC--------------CCCceE
Q 011094 254 FRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP--------------GTGMWE 310 (494)
Q Consensus 254 fRDP~V~w~~~dg~w~MviGa~~~---------~~G~v~lY~S~Dl~~W~~~~~ll~~~~--------------~~gmwE 310 (494)
+|||+|+ +..+|.|||+..+... ..+.+.+|+|+||++|+..+.++...+ ..+..+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999995 5567889988665421 123577999999999999887764321 123455
Q ss_pred eccEEEecccCccccccccCCCCeEEEEEeeeCCC--ceeEEEEEEecCCCCcccCCCCCcccccceeeecCCCccccee
Q 011094 311 CVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSF 388 (494)
Q Consensus 311 CPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~--~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G~fYA~qtf 388 (494)
||+++.++ .|++|..+.... ......+..=|...+.|+..... + .+. .-.-+..|
T Consensus 81 AP~v~~~~---------------g~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIK---------------GRWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSLF 137 (269)
T ss_pred CceEEEEC---------------CEEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCceE
Confidence 99999985 267776665421 11223333333334566532110 0 000 12336778
Q ss_pred ecCCCCcEEEE
Q 011094 389 YDPYKKRRIVW 399 (494)
Q Consensus 389 ~d~~~~Rril~ 399 (494)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 5676654
No 53
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.32 E-value=1.8e-06 Score=89.03 Aligned_cols=107 Identities=21% Similarity=0.283 Sum_probs=80.9
Q ss_pred CCCcEEeeeEEEccCCe--EEEEEeccCCCccc-eEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEee
Q 011094 186 DINGVWTGSATILPDGQ--IVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA 262 (494)
Q Consensus 186 D~~Gv~SGSavv~~dG~--~~~~YTG~~~~~~q-~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~ 262 (494)
....||-..|++ .+|. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.|...++....-||.|..
T Consensus 28 ~~~~vfNpgai~-~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~- 99 (312)
T PF04041_consen 28 EPNAVFNPGAIV-FDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTK- 99 (312)
T ss_dssp TSSEEEEEEEEE-ETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEE-
T ss_pred CcceEEcCcEEE-ECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEE-
Confidence 356799999976 4555 89999887655444 7999999997 899986 57999876555555678999964
Q ss_pred cCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 263 GPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 263 ~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
.+|+|+|++.+.......+.+.+|+||.+|+..+..+.
T Consensus 100 -i~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 100 -IDDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp -ETTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred -ECCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 46899999988755555778899999999999987654
No 54
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.30 E-value=6.4e-06 Score=83.25 Aligned_cols=79 Identities=24% Similarity=0.391 Sum_probs=56.4
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CCeeEEEEEEeCCCCCCEEcCcccccCCCCC-ceEe
Q 011094 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWEC 311 (494)
Q Consensus 238 ~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~g-mwEC 311 (494)
.++|||.+.. +...+|||+|++..++|+|+|+..... .....+.+|+|+||++|+..+.++...+..+ +| |
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 4689998643 457899999975436899999876532 1122577999999999999877653223334 56 9
Q ss_pred ccEEEecc
Q 011094 312 VDFYPVAI 319 (494)
Q Consensus 312 Pdlf~l~~ 319 (494)
|+++....
T Consensus 81 Pev~~d~~ 88 (276)
T cd08983 81 PEAFWDAE 88 (276)
T ss_pred ccceEcCC
Confidence 99998853
No 55
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=98.20 E-value=3e-05 Score=77.27 Aligned_cols=172 Identities=13% Similarity=0.126 Sum_probs=102.6
Q ss_pred CccccccccceeeeecCCCcccC-------CccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccC
Q 011094 110 TNAMFTWQRTSFHFQPEKNWMND-------PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVP 181 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmND-------PNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~P 181 (494)
+..+..|......+.+...+... |. +++.+|+|||||...... .....+.|+|++.. .|+.......+
T Consensus 40 S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~-i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~ 115 (286)
T PF04616_consen 40 SKDLVNWTDAGNVLPPPPDWDWANNGNIWAPE-IHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP 115 (286)
T ss_dssp ESSSSSEEEEEECESSTTTTSTTTSETTEEEE-EEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE
T ss_pred CCCCcccccceeeecccccccccccccccCCe-EEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec
Confidence 34566787777777665444322 43 677899999999922211 23458899999986 89987654433
Q ss_pred CCCcCCCcEEeeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 182 d~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
...+..+++++++||+.+|+|.+.... ..+.+.+|...+. ..++.......+..........-.--|++
T Consensus 116 -----~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d----~~~~~~~~~~~~~~~~~~~~~~~~Egp~~- 185 (286)
T PF04616_consen 116 -----GGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGGIYIAELDPD----GTSLTGEPVVVIFPGDEGWDGGVVEGPFV- 185 (286)
T ss_dssp -----SSSSSSEEEEEETTSEEEEEEEESTTTSSEEEEEEEEEETT----TSSEEEEECEEEEEESGSSTTTBEEEEEE-
T ss_pred -----cccccCceEEEecCCCcEEeCcccCCCccceeEEeecccCc----cccccCcccccccccccccCCccccceEE-
Confidence 234567888887779999999987543 2344455544332 13444332122222211111122335887
Q ss_pred eecCCCeEEEEEeeec-CCeeEEEEEEeCCCCC-CEEc
Q 011094 261 WAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKT-YELL 296 (494)
Q Consensus 261 w~~~dg~w~MviGa~~-~~~G~v~lY~S~Dl~~-W~~~ 296 (494)
++ .+|.|||++.+.. ...=.+.+++|+|+.. |+..
T Consensus 186 ~k-~~g~yYl~~s~~~~~~~y~v~~~~s~~~~gp~~~~ 222 (286)
T PF04616_consen 186 FK-HGGKYYLFYSAGGTGSPYQVGYARSDSPLGPWEWK 222 (286)
T ss_dssp EE-ETTEEEEEEEESGSSTTTEEEEEEESSTTSGGEET
T ss_pred EE-cCCCEEEEEeccCCCCCceEEEeeccCCCCceeec
Confidence 44 6899999988642 2112456789999865 4543
No 56
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=98.07 E-value=5.4e-05 Score=81.57 Aligned_cols=156 Identities=14% Similarity=0.143 Sum_probs=94.2
Q ss_pred CCccccccccceeeeecCCCc----ccCCccceEECCEEEEEEeeCCCCCCCC-CcEEEEEEecCccCeeecc-eeccCC
Q 011094 109 WTNAMFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP-IAMVPD 182 (494)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg-~~~WGHA~S~DLvhW~~~p-~AL~Pd 182 (494)
-+..+..|++-.-=+.|..-| +-.++ .+..+|++||||..+.....+. ...-++|+|+|+.+|+..+ +.|.+.
T Consensus 61 ~S~Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~ 139 (445)
T TIGR01322 61 TSKDLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELP 139 (445)
T ss_pred ECCCccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCC
Confidence 355577786644444454322 12343 3457999999998764322222 2334689999999999876 455543
Q ss_pred CCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCee
Q 011094 183 QWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTT 259 (494)
Q Consensus 183 ~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~---g~~~~~fRDP~V 259 (494)
......+.-...|+ ..+|+++|+|.+..........+..|+| |++|+.. .++..+.. +.....|-.|-+
T Consensus 140 ~~~~~~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl 211 (445)
T TIGR01322 140 PAGYTAHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL 211 (445)
T ss_pred CCCCcCcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE
Confidence 22112234456664 4689999999876543323456777777 4899986 34443321 111124668887
Q ss_pred EeecCCCeEEEEEeee
Q 011094 260 AWAGPDGKWRLTIGSK 275 (494)
Q Consensus 260 ~w~~~dg~w~MviGa~ 275 (494)
++ -+|+|+|+++..
T Consensus 212 -f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 212 -FS-LDGQDVLLFSPQ 225 (445)
T ss_pred -EE-ECCcEEEEEecc
Confidence 43 578999998753
No 57
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.05 E-value=6.2e-05 Score=76.66 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=47.9
Q ss_pred CCCCCCeeEeecCCCeEEEEEeeecC-----CeeEEEEEEeCCCCCCEEcCcccccCC---CCCceEeccEEEec
Q 011094 252 KDFRDPTTAWAGPDGKWRLTIGSKIG-----KTGISLVYQTTDFKTYELLDEYLHAVP---GTGMWECVDFYPVA 318 (494)
Q Consensus 252 ~~fRDP~V~w~~~dg~w~MviGa~~~-----~~G~v~lY~S~Dl~~W~~~~~ll~~~~---~~gmwECPdlf~l~ 318 (494)
..+|||+|++...+|+|||+..+... ..| +.+|+|+||++|+..+.++.... .....++|+++..+
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~g-i~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTG-FDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCc-EEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC
Confidence 35899999765558999999765421 123 67999999999999888774322 12356789998774
No 58
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.01 E-value=9.2e-05 Score=74.35 Aligned_cols=68 Identities=19% Similarity=0.307 Sum_probs=48.6
Q ss_pred CceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccC---------CCCCceE
Q 011094 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 310 (494)
Q Consensus 240 nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~---------~~~gmwE 310 (494)
||||. .++.||.|+ + .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii-~-~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSII-R-AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEE-E-ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67764 357899995 3 57899999765322234 6689999999999988776431 122467
Q ss_pred eccEEEec
Q 011094 311 CVDFYPVA 318 (494)
Q Consensus 311 CPdlf~l~ 318 (494)
||+++..+
T Consensus 70 AP~v~~~~ 77 (269)
T cd08989 70 APCLSYYD 77 (269)
T ss_pred cceEEEEC
Confidence 99999884
No 59
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=97.93 E-value=0.00017 Score=72.90 Aligned_cols=68 Identities=19% Similarity=0.331 Sum_probs=48.7
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 239 ~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
.||||. .++.||.|+ + .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+... ..++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~-~-~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSIL-R-DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEE-E-ECCEEEEEEcchh-cCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 488875 246799995 3 4789999765322 22346799999999999988766432 23578 89998874
No 60
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.92 E-value=0.00025 Score=74.24 Aligned_cols=178 Identities=16% Similarity=0.172 Sum_probs=104.5
Q ss_pred CcCCccccccccceeeeecCCCcc-----cCCccceEECCEEEEEEeeCCCCC---CCCCcEEEEEEecCccC----eee
Q 011094 107 YNWTNAMFTWQRTSFHFQPEKNWM-----NDPNGPLFYKGWYHLFYQYNPDSA---VWGNITWGHAVSADLIH----WLY 174 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf~P~~gwm-----NDPNG~~y~~G~YHLFYQ~nP~~~---~wg~~~WGHA~S~DLvh----W~~ 174 (494)
+-.+..+..|.+ .-++.|+ ++. --+..++..+|+|||||.-+-... ..-....++|+++|+.. |+.
T Consensus 45 h~~S~dlv~W~~-~~~l~p~-~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~ 122 (349)
T cd08997 45 YFYSRAGGNWID-GGKVFPD-GLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFED 122 (349)
T ss_pred EEEeCCCCcccC-CCccCCC-CcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCc
Confidence 334455556655 3444453 221 112222233599999998763211 11235689999999844 444
Q ss_pred cceeccCCC-CcCC-------------CcEEeeeEEEcc-CCeEEEEEeccCCCc-------------------------
Q 011094 175 LPIAMVPDQ-WYDI-------------NGVWTGSATILP-DGQIVMLYTGSTDKS------------------------- 214 (494)
Q Consensus 175 ~p~AL~Pd~-~~D~-------------~Gv~SGSavv~~-dG~~~~~YTG~~~~~------------------------- 214 (494)
+...+.++. .|+. ...-...++.++ +|+++|++++++...
T Consensus 123 ~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 202 (349)
T cd08997 123 HHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGAS 202 (349)
T ss_pred cceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccc
Confidence 445566655 3321 123356666655 699999999987422
Q ss_pred --cceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC-------CeeEEEEE
Q 011094 215 --VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-------KTGISLVY 285 (494)
Q Consensus 215 --~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~-------~~G~v~lY 285 (494)
.-++++|.+.+. .|.+|+-+ .|++.+. +. ...+-+|.++ + .+|+|||+..++.. +...+..|
T Consensus 203 ~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~-~v-~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~ 273 (349)
T cd08997 203 YQNGNVGIAVAKND---DLTEWKLL--PPLLEAN-GV-NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGF 273 (349)
T ss_pred cccceEEEEEecCC---CCCCcEEc--CccccCC-Cc-CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEE
Confidence 235667876643 25789976 5777643 21 2347799994 4 69999999775421 11235567
Q ss_pred EeCCCC-CCEE
Q 011094 286 QTTDFK-TYEL 295 (494)
Q Consensus 286 ~S~Dl~-~W~~ 295 (494)
.|+++. -|+.
T Consensus 274 vsdsl~GP~~~ 284 (349)
T cd08997 274 VSDSLRGPYKP 284 (349)
T ss_pred EeCCCCCCCcc
Confidence 888864 3443
No 61
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.85 E-value=0.00013 Score=78.35 Aligned_cols=158 Identities=15% Similarity=0.158 Sum_probs=95.1
Q ss_pred CcCCccccccccceeeeecCCCcccCCcc-----ceEECCEEEEEEeeCC-CCC--CCCCc-EEEEEEecCccCeeecc-
Q 011094 107 YNWTNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYKGWYHLFYQYNP-DSA--VWGNI-TWGHAVSADLIHWLYLP- 176 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG-----~~y~~G~YHLFYQ~nP-~~~--~wg~~-~WGHA~S~DLvhW~~~p- 176 (494)
+..+..+..|++..-=+.|... .|.+| ++.++|.|||||.-+- ... ...+. .-.+|+|+|++||+..+
T Consensus 42 ha~S~Dlv~W~~~~~aL~P~~~--~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~ 119 (437)
T smart00640 42 HAVSKDLVHWTHLPVALAPDEW--YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPG 119 (437)
T ss_pred EEEcCCcceeeecCcccCCCCc--CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCC
Confidence 4445667788654433556542 35554 3445788999998652 111 12222 23678899999999973
Q ss_pred -eeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCC
Q 011094 177 -IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR 255 (494)
Q Consensus 177 -~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fR 255 (494)
+.|.+...+.....-+..++..++|+++|++.+...+..-.+.++.|+|+ ++|+.. .++..+..+.....|-
T Consensus 120 ~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wE 192 (437)
T smart00640 120 NPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWE 192 (437)
T ss_pred CcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEE
Confidence 55555433223334456665444469999998765444455778888874 899886 3454431121113567
Q ss_pred CCeeEeecCCC-----eEEEEEeee
Q 011094 256 DPTTAWAGPDG-----KWRLTIGSK 275 (494)
Q Consensus 256 DP~V~w~~~dg-----~w~MviGa~ 275 (494)
.|-. ++ -++ +|+|+++..
T Consensus 193 CPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 193 CPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred CCcE-EE-eCCCCCceeEEEEECcC
Confidence 7877 33 344 899988765
No 62
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.77 E-value=0.0011 Score=66.79 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=81.8
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc------CeeecceeccCCCCcCCCcEEeeeEEEccCCeE
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI------HWLYLPIAMVPDQWYDINGVWTGSATILPDGQI 203 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv------hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~ 203 (494)
+.-|. +.+++|+|||||.....+. .....|.|+|++.. .|+...+.+.++.. +......++++++.||+.
T Consensus 57 ~WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~ 132 (279)
T cd08988 57 LWAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQP 132 (279)
T ss_pred Eecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCE
Confidence 44565 7889999999998765432 23568999999853 25543444444332 223457888988889999
Q ss_pred EEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCC--ceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----
Q 011094 204 VMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN--PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----- 276 (494)
Q Consensus 204 ~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~n--PVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~----- 276 (494)
+|+|..... + ....-.+.|... .. ..+. .++..+. .....--|++ ++ .+|.|||+..+..
T Consensus 133 Yl~~g~~~~-g--i~~~eL~~d~~~-----~~-~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~ 199 (279)
T cd08988 133 WLSFGSFWG-G--IKLFELDKDTMK-----PA-EPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGG 199 (279)
T ss_pred EEEecccCC-C--EEEEEECcccCC-----cc-CCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCC
Confidence 999964321 1 112223333221 10 0111 1221111 1112346888 54 6899999876431
Q ss_pred CCeeEEEEEEeCCCC
Q 011094 277 GKTGISLVYQTTDFK 291 (494)
Q Consensus 277 ~~~G~v~lY~S~Dl~ 291 (494)
+..-.+.+++|+++.
T Consensus 200 ~~~y~v~~arS~~~~ 214 (279)
T cd08988 200 DSTYKIAVGRSKNIT 214 (279)
T ss_pred CCCeEEEEEEeCCCC
Confidence 122357788998763
No 63
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00014 Score=74.02 Aligned_cols=105 Identities=18% Similarity=0.268 Sum_probs=81.3
Q ss_pred cEEeeeEEEccCCeEEEEEeccC-----CCccceEEEEEEcCCCCCCcce-EEEcCCCceecC-CCCCCCCCCCCCeeEe
Q 011094 189 GVWTGSATILPDGQIVMLYTGST-----DKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLVP-PRHIGPKDFRDPTTAW 261 (494)
Q Consensus 189 Gv~SGSavv~~dG~~~~~YTG~~-----~~~~q~q~lA~S~D~~d~lL~~-W~K~~~nPVi~~-p~g~~~~~fRDP~V~w 261 (494)
.+|-++++. .++++.|+|.... ........+|.|+|+ .+ |++. .+|++.| -..++....-||.|.
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt- 101 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVT- 101 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEE-
Confidence 789998875 6899999998732 234567889999997 55 9986 4788887 323445567899995
Q ss_pred ecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCccccc
Q 011094 262 AGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (494)
Q Consensus 262 ~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~ 302 (494)
..+|+|+|.+.+..+..-...+..++|+.+|++.+.++.+
T Consensus 102 -~I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 102 -KIGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred -EECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 3689999999998655556778899999999999888753
No 64
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.69 E-value=0.0012 Score=66.65 Aligned_cols=146 Identities=16% Similarity=0.177 Sum_probs=84.0
Q ss_pred cCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeeccee-ccCCCCcCCC--cEEeeeEEEccCC
Q 011094 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA-MVPDQWYDIN--GVWTGSATILPDG 201 (494)
Q Consensus 125 P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~A-L~Pd~~~D~~--Gv~SGSavv~~dG 201 (494)
+..++..||+ ++.++|+++|||-..-.....+...|....+ |...+...+.. ..|...|+.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~-~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMS-NPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECC-CCCccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4456778997 6777899999985322111111223443333 33445433433 3444445443 5677888888899
Q ss_pred eEEEEEeccCC-CccceEEEEEEcCCCCCCc-ceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCe-EEEEEee
Q 011094 202 QIVMLYTGSTD-KSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGS 274 (494)
Q Consensus 202 ~~~~~YTG~~~-~~~q~q~lA~S~D~~d~lL-~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~-w~MviGa 274 (494)
.++|+|++... .....+++|+++...+++. ..|+|. .+||+.....-....--...+ +..++|+ |+|++=+
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~g~GH~~i-v~~~~G~~~~~~yH~ 259 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVYGPGHNSF-TKSPDGTEDWIVYHA 259 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccCcCCccce-EECCCCCEEEEEEcc
Confidence 99999997654 3345667888765433321 358886 478887543100011123444 3456776 8888644
No 65
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.68 E-value=0.0011 Score=66.38 Aligned_cols=138 Identities=15% Similarity=0.086 Sum_probs=83.0
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceee-cc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LP-IAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~-~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
--|. +++++|+|+|||..+ ...|+|+|+|.. .|+. .+ +.+.+.. ......+++++.+.||+++|+|
T Consensus 67 wAP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~ 135 (275)
T cd09004 67 WAPS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYW 135 (275)
T ss_pred CCCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEE
Confidence 3465 788899999999854 357999999965 6887 33 3333321 2234567888877899999999
Q ss_pred eccCCCccceEEE-EEEcCCCCCCcceEEEcCCCcee-cCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-C-CeeEEE
Q 011094 208 TGSTDKSVQVQNL-AYPADPSDPLLLDWVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G-KTGISL 283 (494)
Q Consensus 208 TG~~~~~~q~q~l-A~S~D~~d~lL~~W~K~~~nPVi-~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~-~~G~v~ 283 (494)
.+.. ...+ ..+.|. .+|+.. ..++ ..+. .-+--|.+ ++ .+|+|||++.+.. . ..-.+.
T Consensus 136 ~~~~-----~~~i~~l~~d~-----~~~~~~--~~~~~~~~~----~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 136 GGWG-----HCNVAKLNEDM-----ISFDGE--RDGSEITPK----NYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred cCcC-----CEEEEEECCCc-----ccccCc--ceeeeccCC----CceecceE-EE-ECCEEEEEEECCCCCCCCceEE
Confidence 7531 1223 234443 556432 1121 1111 12457888 44 6899999987642 1 122455
Q ss_pred EEEeCCCC-CCEEcC
Q 011094 284 VYQTTDFK-TYELLD 297 (494)
Q Consensus 284 lY~S~Dl~-~W~~~~ 297 (494)
+.+|++.. -|+..+
T Consensus 198 ya~s~~~~GP~~~~~ 212 (275)
T cd09004 198 YAMADSPLGPFERPG 212 (275)
T ss_pred EEEcCCCCCCcccCC
Confidence 66887753 366544
No 66
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.54 E-value=0.0023 Score=64.33 Aligned_cols=133 Identities=14% Similarity=0.097 Sum_probs=78.1
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
+--|. ++|.+|+|||||-.+. ...+.|+|++.. .|+..+... ...+++++++.||+.+|+|.
T Consensus 76 ~WAP~-v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~ 138 (269)
T cd09001 76 QWAPS-LRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYG 138 (269)
T ss_pred EECCc-eEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeC
Confidence 34565 7888999999998751 124677777743 576654321 34577888888999999996
Q ss_pred ccCCCccceEEEE-EEcCCCCCCcceEEEcCCCc-eecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEE
Q 011094 209 GSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNP-VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (494)
Q Consensus 209 G~~~~~~q~q~lA-~S~D~~d~lL~~W~K~~~nP-Vi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~ 286 (494)
+. .+.++ .+.|. .... ...+ ++..+. ......--|++ ++ .+|.|||++.+..+....+.+++
T Consensus 139 ~~------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~ 202 (269)
T cd09001 139 GG------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLR 202 (269)
T ss_pred CC------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEE
Confidence 53 23343 33332 2221 1222 333221 11123457888 44 68999999876422223556789
Q ss_pred eCCCCC-CEE
Q 011094 287 TTDFKT-YEL 295 (494)
Q Consensus 287 S~Dl~~-W~~ 295 (494)
|+++.. |+.
T Consensus 203 s~~~~GP~~~ 212 (269)
T cd09001 203 SKSLTGPYES 212 (269)
T ss_pred eCCCCCCcCC
Confidence 988543 544
No 67
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.51 E-value=0.0043 Score=62.27 Aligned_cols=146 Identities=16% Similarity=0.198 Sum_probs=86.8
Q ss_pred ccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 130 MNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
+--|. ++|+ +|+|||||..+... .+....|+|+|++.. -|+.++..+ |. .......++++++||+.+|+
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~ 136 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLL 136 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEE
Confidence 44454 5664 59999999976422 245689999998764 477765432 21 23456788888889999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC-CeeEEEEE
Q 011094 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVY 285 (494)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~-~~G~v~lY 285 (494)
|....+ +.+.++.-.+. +..+ .+.+..... ....-.|.+ ++ .+|.|||+...... ....+..+
T Consensus 137 ~~~~~~---~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~~y~ 200 (265)
T cd08985 137 YSDRDN---SDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDARYA 200 (265)
T ss_pred EecCCC---CceEEEEeCCC----cccc---cceEEEccC----CCccccceE-EE-ECCEEEEEEccCCCccCCceEEE
Confidence 986532 23444432221 1333 223332111 124568988 54 68999999865321 11234567
Q ss_pred EeCCCC-CCEEcCcc
Q 011094 286 QTTDFK-TYELLDEY 299 (494)
Q Consensus 286 ~S~Dl~-~W~~~~~l 299 (494)
+|+++. -|+..+.+
T Consensus 201 ~s~s~~GP~~~~~~~ 215 (265)
T cd08985 201 TATSILGPWTDLGNP 215 (265)
T ss_pred EecCCCCCccccCcC
Confidence 888763 56665544
No 68
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.45 E-value=0.0044 Score=63.90 Aligned_cols=167 Identities=19% Similarity=0.243 Sum_probs=100.1
Q ss_pred ccccceeeeecC--CCcccCCccceEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEecCc-cCeeecceeccCCC
Q 011094 115 TWQRTSFHFQPE--KNWMNDPNGPLFYK-GWYHLFYQYNPDSA-------VWGNITWGHAVSADL-IHWLYLPIAMVPDQ 183 (494)
Q Consensus 115 ~w~Rp~~Hf~P~--~gwmNDPNG~~y~~-G~YHLFYQ~nP~~~-------~wg~~~WGHA~S~DL-vhW~~~p~AL~Pd~ 183 (494)
.|..++.-.... ...+.||. ++... |+-+|||...+... .+......+..|+|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 465554433332 24567897 77776 99999998877542 123455667888775 89975 33333332
Q ss_pred C-cCCCcEE--eeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 184 W-YDINGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 184 ~-~D~~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
. .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.+ .+|+... ++ .+ ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE
Confidence 1 1112223 234455678998876554433334556778899875 8997632 11 11 1233568874
Q ss_pred eecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcCc
Q 011094 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (494)
Q Consensus 261 w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~~~ 298 (494)
.-++|+.+|+..... .|...+|.|.| ..+|+....
T Consensus 205 -el~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 -ELSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred -EecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 335898888766532 46667888887 589997544
No 69
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.43 E-value=0.0056 Score=62.98 Aligned_cols=167 Identities=13% Similarity=0.193 Sum_probs=93.0
Q ss_pred cccccccceeeeec--CCCc---ccCCccceEEC----CEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeec-ceec-
Q 011094 112 AMFTWQRTSFHFQP--EKNW---MNDPNGPLFYK----GWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYL-PIAM- 179 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P--~~gw---mNDPNG~~y~~----G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~-p~AL- 179 (494)
.+..|+....-|.| ...| +--|. +++++ |+|+|||... ....|.|+|+|.. .|+.+ +..|
T Consensus 55 DL~~W~~~g~v~~~~~~~~w~~~~WAP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~ 126 (311)
T cd09003 55 DMVNWTDHGEIFVPNGIAKWAGNSWAPS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLI 126 (311)
T ss_pred CCCCcEEcccccCcCCCCCcccccCCCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeee
Confidence 35566554444432 2223 23465 67787 9999999632 2357999999954 79875 3222
Q ss_pred cCCC-CcC-CCcEEeeeEEEccCCeEEEEEeccCC----CccceEEEEEEc-CCCCCCcceEEEcCCCceecCCCCCCCC
Q 011094 180 VPDQ-WYD-INGVWTGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGPK 252 (494)
Q Consensus 180 ~Pd~-~~D-~~Gv~SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~-D~~d~lL~~W~K~~~nPVi~~p~g~~~~ 252 (494)
.+.. ..+ ......+++++++||+.+|+|.+... ...+.+.+|.-. |. .+ ..+.++....+ .
T Consensus 127 ~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~ 194 (311)
T cd09003 127 TGSTPGCAGVVWLFDPAVFVDDDGQGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----Y 194 (311)
T ss_pred cCCCCCccCCccccCCCeEECCCCCEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----C
Confidence 2211 111 12246888888889999999975332 111334444332 32 22 22233322211 2
Q ss_pred CCCCCeeEeecCCCeEEEEEeeec-------CCeeEEEEEEeCCC-CCCEEcCccc
Q 011094 253 DFRDPTTAWAGPDGKWRLTIGSKI-------GKTGISLVYQTTDF-KTYELLDEYL 300 (494)
Q Consensus 253 ~fRDP~V~w~~~dg~w~MviGa~~-------~~~G~v~lY~S~Dl-~~W~~~~~ll 300 (494)
.+--|++ ++ .+|.|||+..+.. .....+.+.+|++. --|+..+.++
T Consensus 195 ~~Egp~~-~K-~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 195 FFEASGL-HK-INGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred ceEeeeE-EE-ECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 3457887 44 6899999886531 22345556678764 3477655554
No 70
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.39 E-value=0.0064 Score=61.40 Aligned_cols=144 Identities=17% Similarity=0.113 Sum_probs=82.4
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
+.-|. +++++|+|||||...... +....+.|+|+|.. -|++ +..+ +. .+..++++.++||+.+|+|.
T Consensus 68 ~WAP~-v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~-~~~~-~~------~~iDp~vf~d~dG~~Y~~~~ 135 (288)
T cd09000 68 IWAPT-IRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSD-PVWL-DS------GGIDPSLFFDDDGKVYLVGN 135 (288)
T ss_pred eEcce-EEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcC-CEec-CC------CccCCceeEcCCCCEEEEec
Confidence 34576 788999999999866432 22345678898873 6774 2222 21 45678888877999999886
Q ss_pred ccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCce-ecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCeeEE
Q 011094 209 GSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGIS 282 (494)
Q Consensus 209 G~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPV-i~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G~v 282 (494)
..... ....+.++..+. ..++-. +.+. +.... .....--|.+ ++ .+|+|||++.+.. ...-.+
T Consensus 136 ~~~~~~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~--~~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v 204 (288)
T cd09000 136 GWDERRGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGT--GGRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSV 204 (288)
T ss_pred ccCCccccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCC--CCCCcccCeE-EE-ECCEEEEEEecCCCCCCeEE
Confidence 54221 123344543322 112111 1221 11110 0112346888 44 6899999986432 222356
Q ss_pred EEEEeCCCC-CCEEc
Q 011094 283 LVYQTTDFK-TYELL 296 (494)
Q Consensus 283 ~lY~S~Dl~-~W~~~ 296 (494)
.+++|+++. -|+..
T Consensus 205 ~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 205 TVARSRSITGPYEPA 219 (288)
T ss_pred EEEEeCCCCCCCccC
Confidence 788999876 56653
No 71
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.32 E-value=0.012 Score=58.15 Aligned_cols=164 Identities=19% Similarity=0.300 Sum_probs=97.3
Q ss_pred ccccceeeeecC--CCcccCCccceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcE
Q 011094 115 TWQRTSFHFQPE--KNWMNDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV 190 (494)
Q Consensus 115 ~w~Rp~~Hf~P~--~gwmNDPNG~~y-~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv 190 (494)
.|..|+-=+.++ ..-..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.++......+.
T Consensus 31 tWs~~~~v~~~~~~~~~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~ 108 (275)
T PF13088_consen 31 TWSEPRIVADGPKPGRRYGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGP 108 (275)
T ss_dssp EEEEEEEEETSTBTTCEEEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEEC
T ss_pred eeCCCEEEeeccccCCcccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceecc
Confidence 465565555555 33345786 555 499999999665554444444444599999 99999754 2333221223344
Q ss_pred EeeeEEEccCCeEEEE-EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEE
Q 011094 191 WTGSATILPDGQIVML-YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWR 269 (494)
Q Consensus 191 ~SGSavv~~dG~~~~~-YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~ 269 (494)
..+.++...+|++++- |.. ........+.+|.|.+ ++|+... ++.. ....--|.+ ....+|+.+
T Consensus 109 ~~~~~i~~~~G~l~~~~~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~-~~~~dG~l~ 173 (275)
T PF13088_consen 109 GRGPPIQLPDGRLIAPYYHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSI-VELPDGRLL 173 (275)
T ss_dssp SEEEEEEECTTEEEEEEEEE--SSCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEE-EEETTSEEE
T ss_pred ceeeeeEecCCCEEEEEeec--cccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEE-EECCCCcEE
Confidence 5555566679987775 443 1223566788999986 8998752 2210 012224555 334788888
Q ss_pred EEEeeecCCeeEEEEEEeCC-CCCCEEcC
Q 011094 270 LTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (494)
Q Consensus 270 MviGa~~~~~G~v~lY~S~D-l~~W~~~~ 297 (494)
|++... . .+.+.+++|.| ..+|+...
T Consensus 174 ~~~R~~-~-~~~~~~~~S~D~G~TWs~~~ 200 (275)
T PF13088_consen 174 AVFRTE-G-NDDIYISRSTDGGRTWSPPQ 200 (275)
T ss_dssp EEEEEC-S-STEEEEEEESSTTSS-EEEE
T ss_pred EEEEcc-C-CCcEEEEEECCCCCcCCCce
Confidence 887653 2 22667788877 79999743
No 72
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.00093 Score=72.84 Aligned_cols=140 Identities=24% Similarity=0.385 Sum_probs=81.3
Q ss_pred EEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCeEEEEEeccCCCc---cceEEEEEEcCCCCCCc
Q 011094 162 GHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLL 231 (494)
Q Consensus 162 GHA~S~DLvhW~~~p~AL~Pd~~~-------D~~Gv~SGSavv~~dG~~~~~YTG~~~~~---~q~q~lA~S~D~~d~lL 231 (494)
.-+.|+||+||+...-.|.+...+ +..|||..++. .+||+++|+||-..... ....+..++.+..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 347799999999887655554321 46789999986 79999999998764321 22223334433211
Q ss_pred ceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCC------eeEEEEEEeCCCCCCEEcCc----ccc
Q 011094 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK------TGISLVYQTTDFKTYELLDE----YLH 301 (494)
Q Consensus 232 ~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~------~G~v~lY~S~Dl~~W~~~~~----ll~ 301 (494)
..|.. |+..+-. .--||.+++ ++||+-||+.|+.... .|+++ .-.|-+.-.+.+. ++.
T Consensus 132 G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w~~~~~~~~~~~i~l--~~~~~~~~~l~g~~~~~~~~ 199 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSWDGGIFMHSFAGIIL--QEYDKTTQKLVGQGYKIIFD 199 (549)
T ss_pred CCccc----ceecCCc-----CccCCceee-cCCCCEEEEecccCCCcccccccceee--eeccccccccCCccceeEec
Confidence 35643 3333221 134999954 6889999999875321 23433 3333333333333 222
Q ss_pred cCCCCCceEeccEEEec
Q 011094 302 AVPGTGMWECVDFYPVA 318 (494)
Q Consensus 302 ~~~~~gmwECPdlf~l~ 318 (494)
. ...+..|-|-+++.+
T Consensus 200 G-~~~~~~EGPhl~k~~ 215 (549)
T COG3507 200 G-GNGGLTEGPHLYKKT 215 (549)
T ss_pred c-CCCccccCceeeccC
Confidence 1 112367888777664
No 73
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.26 E-value=0.027 Score=56.04 Aligned_cols=208 Identities=15% Similarity=0.231 Sum_probs=105.7
Q ss_pred eeeeecCCCcc--cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE-
Q 011094 120 SFHFQPEKNWM--NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT- 196 (494)
Q Consensus 120 ~~Hf~P~~gwm--NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav- 196 (494)
.--.+|+.||. .||- .++++|+||+|....-.+..||-|. =.-+-+|....-|= +-|-..+.-...+.
T Consensus 13 g~L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~sm~-----f~~Ftdws~~~sA~---q~~m~~~~vAP~vFY 83 (271)
T PF03664_consen 13 GPLAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYGSMN-----FGPFTDWSQMASAS---QNYMDQSAVAPQVFY 83 (271)
T ss_pred CccccCCCCceeccCce-EEeECCEEEEEEEeccCCCccceEe-----eeccCCHHHhhccc---cccCCcccccceEEE
Confidence 34456888884 6997 8999999999998764444444333 33455677655331 11111111122222
Q ss_pred EccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC-CCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
..+...+||.|--... .-...++.|.++| ..|... .|+.... .+ .....-|..|+- ++..-||+...
T Consensus 84 FaPk~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~-~~~g~iD~~vI~--D~~n~yLFfa~- 151 (271)
T PF03664_consen 84 FAPKNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGSISG-SGTGPIDQWVIC--DDTNMYLFFAG- 151 (271)
T ss_pred ecCCcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--cccccccccC-CCCCceeeEEEe--cCCceEEEEcC-
Confidence 2467888888863211 1123345666665 468763 3453321 11 123457998874 23334444432
Q ss_pred cCCeeEEEEEEeCC-CCC----CEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEE
Q 011094 276 IGKTGISLVYQTTD-FKT----YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350 (494)
Q Consensus 276 ~~~~G~v~lY~S~D-l~~----W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y 350 (494)
+ .|. ||||.= +-+ +.-...+.........+|.++.|+|.+. .+++|.+..-+..+.||
T Consensus 152 D--nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~G~-------------~~YLmiVEaiGs~gRyF 214 (271)
T PF03664_consen 152 D--NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVKGQ-------------NQYLMIVEAIGSDGRYF 214 (271)
T ss_pred C--CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEcCC-------------ceEEEEEEEecCCCcEE
Confidence 2 254 688742 122 1100111111223348999999999632 25555554433333443
Q ss_pred EEEEecCCCCcccCC
Q 011094 351 AIGTYNPANDKWTPD 365 (494)
Q Consensus 351 ~iG~~d~~~~~f~p~ 365 (494)
.-=+=..-+|.|+|-
T Consensus 215 RSfTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 215 RSFTATSLDGPWTPQ 229 (271)
T ss_pred EeeecCCCCCcceec
Confidence 322222234578764
No 74
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.76 E-value=0.019 Score=58.73 Aligned_cols=134 Identities=15% Similarity=0.192 Sum_probs=74.5
Q ss_pred CCcccCCccceEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcC----------CCcEE
Q 011094 127 KNWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYD----------INGVW 191 (494)
Q Consensus 127 ~gwmNDPNG~~y~-~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D----------~~Gv~ 191 (494)
..+.-||+ ++.+ +|+.+|+|-..- ++ ..++---+.|+..=.-.+..|. |+..|. ..++.
T Consensus 88 ~~~~IDp~-vf~DdDGk~Yl~~g~~~----~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~ 161 (295)
T cd08982 88 PPGLADPA-LFIDDDGRLYLYYGCSN----NY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWM 161 (295)
T ss_pred CCCccCCc-eEECCCCCEEEEEecCC----CC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccc
Confidence 45677997 6665 499999984211 11 1233333445442222222221 111111 23466
Q ss_pred eeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEE
Q 011094 192 TGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 270 (494)
Q Consensus 192 SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~M 270 (494)
-|..+...+|+++|+|++.... ....+.+|+|++. +.-|++...|||+..+.+. ...--...+ +...+|+|++
T Consensus 162 EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~ 235 (295)
T cd08982 162 EGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWH 235 (295)
T ss_pred cccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEE
Confidence 7888877899999999865322 2235678888764 4678777678887644321 001112234 3456788887
Q ss_pred EE
Q 011094 271 TI 272 (494)
Q Consensus 271 vi 272 (494)
+.
T Consensus 236 ~y 237 (295)
T cd08982 236 VG 237 (295)
T ss_pred EE
Confidence 75
No 75
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=96.56 E-value=0.038 Score=56.68 Aligned_cols=139 Identities=20% Similarity=0.282 Sum_probs=90.0
Q ss_pred cCCccccccccceeeeecCCCcccCCccc-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-cCccCeeecc---ee
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYNPDSAVWGNITWGHAVS-ADLIHWLYLP---IA 178 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S-~DLvhW~~~p---~A 178 (494)
.-+..++.|++...=+.|... .|.+|+ +.+++.+++||.-+-.. +...-..|+| +|.+||+..+ ++
T Consensus 43 a~S~Dlv~W~~~~~aL~P~~~--~d~~g~~SGs~~~~~~~~~~~YTg~~~~---~~~~q~~A~s~d~~~~w~k~~~~~pv 117 (308)
T PF00251_consen 43 ATSKDLVHWEHLPVALPPDEE--YDADGCFSGSAVVDDDNLVLFYTGNNRD---GKQVQCLAYSTDDGITWTKYPQGNPV 117 (308)
T ss_dssp EEESSSSSEEEEEEEE-SSSG--GGTTEEEEEEEEEETTCEEEEEEEEETT---TEEEEEEEEESSTTSSEEE-TTTCES
T ss_pred EECCCCCCceeCCceEccccc--CCcCccCcceEEEECCEEEEEEeccCCC---CCeEEEEEEECCCCCceEEcCCCCcE
Confidence 345667889777766667643 477773 33578999999866442 1345678999 8899999843 44
Q ss_pred ccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCe
Q 011094 179 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (494)
Q Consensus 179 L~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~ 258 (494)
|......+..+.-+..++...+|+++|+..+... ....+.+..|+|+ ++|+.. .++...... ....|-.|-
T Consensus 118 i~~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~Dl-----~~W~~~--~~l~~~~~~-~g~~~ECPd 188 (308)
T PF00251_consen 118 IPEPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDDL-----IHWEYL--GPLFIPGDN-GGGMWECPD 188 (308)
T ss_dssp BESSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESSS-----SSEEEE--EEESEEETT-TSSEEEEEE
T ss_pred EEecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCCc-----ccCcee--Ccccccccc-cccccccce
Confidence 4422222567788888866778999999877654 3445667788774 899986 344333221 123556777
Q ss_pred eE
Q 011094 259 TA 260 (494)
Q Consensus 259 V~ 260 (494)
++
T Consensus 189 lf 190 (308)
T PF00251_consen 189 LF 190 (308)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 76
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.47 E-value=0.1 Score=51.57 Aligned_cols=146 Identities=18% Similarity=0.093 Sum_probs=79.6
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--cCc-cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCC---c
Q 011094 141 GWYHLFYQYNPDSAVWGNITWGHAVS--ADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK---S 214 (494)
Q Consensus 141 G~YHLFYQ~nP~~~~wg~~~WGHA~S--~DL-vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~---~ 214 (494)
|+...|+.- +...+.....-.+| +|. .+|...-....+. .....+..++++.+++|++++||+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 556666665 23334444444445 886 7898755444333 12355777877777899999999544322 1
Q ss_pred cceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCC
Q 011094 215 VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTY 293 (494)
Q Consensus 215 ~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W 293 (494)
.......+|.|.+ ++|.... .|...+........+.+-+. -.+|++++..-........+.++.|+| .+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i~--~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPIQ--LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEEE--ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeeeE--ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222238999975 8999863 23222111111112333232 258887776322222334455556655 7999
Q ss_pred EEcCcc
Q 011094 294 ELLDEY 299 (494)
Q Consensus 294 ~~~~~l 299 (494)
+....+
T Consensus 148 ~~~~~~ 153 (275)
T PF13088_consen 148 SSGSPI 153 (275)
T ss_dssp EEEEEC
T ss_pred eccccc
Confidence 987554
No 77
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=95.92 E-value=0.19 Score=51.51 Aligned_cols=143 Identities=12% Similarity=0.154 Sum_probs=78.3
Q ss_pred cCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---eeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 131 NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 131 NDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvh---W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
--|. ++|+ +++|+||||+.+ ...++|+|..+ |....+.......-...|..+-.+ +..|++.||
T Consensus 79 wAPq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YL 147 (303)
T cd08987 79 VAPQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYL 147 (303)
T ss_pred ccCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEE
Confidence 3676 6655 599999999632 46899999765 664433222211112234455566 567999999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCC--eEEEEEeeecCCee-EE
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG--KWRLTIGSKIGKTG-IS 282 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg--~w~MviGa~~~~~G-~v 282 (494)
|+.+... .+..|-... .+|-....+.+....++....-|--|.| ++ .+| +|+|++-+.....+ -.
T Consensus 148 ff~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYf 215 (303)
T cd08987 148 FFSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYF 215 (303)
T ss_pred EEecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeE
Confidence 9988532 333442221 1222211122222111111234678888 55 445 99999977532122 12
Q ss_pred EEEEeCCC-CCCEEc
Q 011094 283 LVYQTTDF-KTYELL 296 (494)
Q Consensus 283 ~lY~S~Dl-~~W~~~ 296 (494)
.-++|+.+ -.|+..
T Consensus 216 rs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 216 RSWTATSLDGPWTPL 230 (303)
T ss_pred EEEEcCCCCCCceec
Confidence 23667776 468865
No 78
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=93.30 E-value=11 Score=38.74 Aligned_cols=146 Identities=15% Similarity=0.166 Sum_probs=82.1
Q ss_pred CcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCC----------ccceEEEEEEcCC
Q 011094 158 NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK----------SVQVQNLAYPADP 226 (494)
Q Consensus 158 ~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----------~~q~q~lA~S~D~ 226 (494)
.+....+.|.| ..+|...- ++..... ....++.++++.+.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 46677788887 68998853 4444322 2356788888775559999999865431 2345778889887
Q ss_pred CCCCcceEEEcCCCceecCC--CCCCCCCCCCC--eeEeecCCCeEEEEEeeecC--CeeEEEEEEeCCCCCCEEcCccc
Q 011094 227 SDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDP--TTAWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFKTYELLDEYL 300 (494)
Q Consensus 227 ~d~lL~~W~K~~~nPVi~~p--~g~~~~~fRDP--~V~w~~~dg~w~MviGa~~~--~~G~v~lY~S~Dl~~W~~~~~ll 300 (494)
+ .+|.+.. .+.... ..+ ..-++-| -+. -.+|++++.+-.... ..-..++|..++.++|+.....
T Consensus 123 G----~tW~~p~--~l~~~~~~~~~-~~~~~~~g~gi~--l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~- 192 (351)
T cd00260 123 G----ITWSSPR--DLTPSVKGDNW-AALFTGPGSGIQ--MKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEGV- 192 (351)
T ss_pred C----ceecCCc--cCCccccCcce-eEEEecCcCeEE--ecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCCC-
Confidence 5 8997631 222111 111 1112233 221 247888776644322 1223445555557999864322
Q ss_pred ccCCCCCceEeccEEEec
Q 011094 301 HAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 301 ~~~~~~gmwECPdlf~l~ 318 (494)
.. ..++.| |.++++.
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 123456 5577775
No 79
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=93.15 E-value=0.42 Score=49.57 Aligned_cols=91 Identities=25% Similarity=0.466 Sum_probs=51.7
Q ss_pred eeEEEccCCeEEEEEeccCCCcc-ceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE-eecCCCeEEE
Q 011094 193 GSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRL 270 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~-q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~-w~~~dg~w~M 270 (494)
||.|+.+||.+++=-.+...+.. .+-.|-||.|.+ .+|+-..+. .....+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec--cCCeeEE
Confidence 44556689998877676655555 377888999865 899875321 12356899997 5 4788888
Q ss_pred EEeeecCCeeEEEEEEeCCC-CCCEEcCcccc
Q 011094 271 TIGSKIGKTGISLVYQTTDF-KTYELLDEYLH 301 (494)
Q Consensus 271 viGa~~~~~G~v~lY~S~Dl-~~W~~~~~ll~ 301 (494)
+.... .|.--+|+|.|. ..|+..-.-+.
T Consensus 189 ~~~c~---~g~rrVYeS~DmG~tWtea~gtls 217 (310)
T PF13859_consen 189 MTACD---DGRRRVYESGDMGTTWTEALGTLS 217 (310)
T ss_dssp EEE-T---TS---EEEESSTTSS-EE-TTTTT
T ss_pred EEecc---cceEEEEEEcccceehhhccCccc
Confidence 75532 255568999985 88997444443
No 80
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=92.51 E-value=0.93 Score=44.63 Aligned_cols=111 Identities=26% Similarity=0.504 Sum_probs=68.9
Q ss_pred cccCCccceEECC-EEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec--ceecc-CCCCcCCCcEE--eeeEEEccCCe
Q 011094 129 WMNDPNGPLFYKG-WYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL--PIAMV-PDQWYDINGVW--TGSATILPDGQ 202 (494)
Q Consensus 129 wmNDPNG~~y~~G-~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~--p~AL~-Pd~~~D~~Gv~--SGSavv~~dG~ 202 (494)
+.=|-. .++++| .|+++-|..|+-. |+...-.|.-.+ -|+-. |+.|. |.-.|+..|.| .|-||+.++|+
T Consensus 131 fsldat-tfeh~gk~yyvwaqkdp~i~--gnsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngk 205 (324)
T COG3940 131 FSLDAT-TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGK 205 (324)
T ss_pred ceeeee-eeeeCCEEEEEEeccCCCcc--CCcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCE
Confidence 333543 567777 6888889888654 444444454444 36544 44443 33356667765 68888889999
Q ss_pred EEEEEeccCCCccceEEEEEEcCCCCCC-cceEEEcCCCceecC
Q 011094 203 IVMLYTGSTDKSVQVQNLAYPADPSDPL-LLDWVKYPGNPVLVP 245 (494)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~d~l-L~~W~K~~~nPVi~~ 245 (494)
+.+-|.....+-.-+.++-+....+|.+ -.+|+|.+ .||+..
T Consensus 206 ifi~ysasatd~nycmgllwanen~dlldpaswtksp-tpvf~t 248 (324)
T COG3940 206 IFITYSASATDVNYCMGLLWANENSDLLDPASWTKSP-TPVFKT 248 (324)
T ss_pred EEEEEeccccccceeeeeeeecccCCcCCchhcccCC-Ccceee
Confidence 9999998765544455555543333221 15899964 788764
No 81
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=85.34 E-value=21 Score=37.22 Aligned_cols=157 Identities=20% Similarity=0.202 Sum_probs=87.4
Q ss_pred CCccceEECCEEEEEEeeCCC----CCCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcE------EeeeEEEccC
Q 011094 132 DPNGPLFYKGWYHLFYQYNPD----SAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV------WTGSATILPD 200 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~----~~~wg~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv------~SGSavv~~d 200 (494)
=|.+.|-.+|+-+|.|...-. ...|.-..=+.|.|+| ..+|+..+..+.+.... ..|+ |--++....|
T Consensus 96 iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~-~~g~~~~~~~fq~~a~~~~d 174 (316)
T PF13810_consen 96 IPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPF-HPGFNQGNWNFQMAAFVKDD 174 (316)
T ss_pred cccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCcccccccc-cCCccccccccccccccCCC
Confidence 488888889999999975421 1123222347899999 88999998666555311 1111 2222333457
Q ss_pred CeEEEEEeccCCCccceEEEEEEc--CCCCCC------cce--EEEcCC--CceecCCCCCCCCCCCCCeeEeecCCCeE
Q 011094 201 GQIVMLYTGSTDKSVQVQNLAYPA--DPSDPL------LLD--WVKYPG--NPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (494)
Q Consensus 201 G~~~~~YTG~~~~~~q~q~lA~S~--D~~d~l------L~~--W~K~~~--nPVi~~p~g~~~~~fRDP~V~w~~~dg~w 268 (494)
|-+|+|=|...+. ....||.-. +..|+. ... |.+... .||+..+ .---.|.|.+..|+|
T Consensus 175 gyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~~~gk~ 245 (316)
T PF13810_consen 175 GYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNEYLGKW 245 (316)
T ss_pred CEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeCCCCEE
Confidence 7677776654432 223444322 111110 112 654321 3555433 123356677778999
Q ss_pred EEEEeeecCCeeEEEEEEeCCCC-CCEEcCccc
Q 011094 269 RLTIGSKIGKTGISLVYQTTDFK-TYELLDEYL 300 (494)
Q Consensus 269 ~MviGa~~~~~G~v~lY~S~Dl~-~W~~~~~ll 300 (494)
+|+.... ..+.|.+.++++.. .|.....+.
T Consensus 246 Vl~~~~~--~~~~I~~RtA~~P~GpWs~~~~l~ 276 (316)
T PF13810_consen 246 VLSYFDA--GTGGIVLRTAPSPTGPWSEPKPLV 276 (316)
T ss_pred EEEEecc--cCCcEEEEecCCCCCCCCCCeeEE
Confidence 9997642 23567677788776 587544443
No 82
>PTZ00334 trans-sialidase; Provisional
Probab=84.83 E-value=6.3 Score=45.70 Aligned_cols=89 Identities=21% Similarity=0.365 Sum_probs=57.1
Q ss_pred eeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE-eecCCCeEEEE
Q 011094 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRLT 271 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~-w~~~dg~w~Mv 271 (494)
||.|+.+||.+++=-.+...++..+-.|-||.|. .+|+-..+ ....+.+||.|+ | ++|+-.|+
T Consensus 263 GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~-----g~W~ls~g---------~s~~gC~~P~I~EW--e~gkLlM~ 326 (780)
T PTZ00334 263 GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSAT-----ESGNLSKG---------MSADGCSDPSVVEW--KEGKLMMM 326 (780)
T ss_pred cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCC-----CCeEEcCC---------CCCCCCCCCEEEEE--cCCeEEEE
Confidence 4445568999876555654445556678899885 35854322 222357899987 5 35787777
Q ss_pred EeeecCCeeEEEEEEeCCC-CCCEEcCccc
Q 011094 272 IGSKIGKTGISLVYQTTDF-KTYELLDEYL 300 (494)
Q Consensus 272 iGa~~~~~G~v~lY~S~Dl-~~W~~~~~ll 300 (494)
.... .|.--+|+|.|. ..|+..-.-+
T Consensus 327 t~C~---dG~RrVYES~DmG~tWtEAlGTL 353 (780)
T PTZ00334 327 TACD---DGRRRVYESGDKGDSWTEALGTL 353 (780)
T ss_pred EEeC---CCCEEEEEECCCCCChhhCCCcc
Confidence 6543 255568999995 7898654444
No 83
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=76.50 E-value=13 Score=38.80 Aligned_cols=95 Identities=18% Similarity=0.326 Sum_probs=55.8
Q ss_pred ccCCeEEEEEeccCCCc-------cceEEEEEEcCCCCCCcceEEEcCCCceecCC---CCCCCCCCCCCeeEeecCCCe
Q 011094 198 LPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDFRDPTTAWAGPDGK 267 (494)
Q Consensus 198 ~~dG~~~~~YTG~~~~~-------~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p---~g~~~~~fRDP~V~w~~~dg~ 267 (494)
..+|+.||.|..+..-+ .....||+|+|.+ .+|++.+. .+-.+. ++.....+......+. .++.
T Consensus 102 ~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~~-~~~~~~~~~~g~~~~~~~fq~~a~~-~~dg 175 (316)
T PF13810_consen 102 SVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVPG-TIRPNSPFHPGFNQGNWNFQMAAFV-KDDG 175 (316)
T ss_pred EECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCCC-cccccccccCCcccccccccccccc-CCCC
Confidence 46899999999875322 2256799999975 89999742 222221 1211101112222232 3555
Q ss_pred EEEEEeeecCCeeEEEEEEe-----CCCCCCEEcCc
Q 011094 268 WRLTIGSKIGKTGISLVYQT-----TDFKTYELLDE 298 (494)
Q Consensus 268 w~MviGa~~~~~G~v~lY~S-----~Dl~~W~~~~~ 298 (494)
|+-++|...++.|.+.|+|- .|+..||+-..
T Consensus 176 yVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~g 211 (316)
T PF13810_consen 176 YVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWDG 211 (316)
T ss_pred EEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccCC
Confidence 77777876555677778875 36667777543
No 84
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=72.66 E-value=1e+02 Score=33.61 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=80.0
Q ss_pred CCEEEEEEeeCCCC-CCCC-----CcEEEEEEecC----ccCeeecceeccCCCCcCC-------CcEEeeeEEEc-cCC
Q 011094 140 KGWYHLFYQYNPDS-AVWG-----NITWGHAVSAD----LIHWLYLPIAMVPDQWYDI-------NGVWTGSATIL-PDG 201 (494)
Q Consensus 140 ~G~YHLFYQ~nP~~-~~wg-----~~~WGHA~S~D----LvhW~~~p~AL~Pd~~~D~-------~Gv~SGSavv~-~dG 201 (494)
+|+-.|||...-.+ ..-. -..-|++.+.| +-.|+.+-+.+.+|..+-. ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999873221 1111 13457777777 6668888888889874322 24457888776 589
Q ss_pred eEEEEEeccCCC--------------------------------ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCC
Q 011094 202 QIVMLYTGSTDK--------------------------------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249 (494)
Q Consensus 202 ~~~~~YTG~~~~--------------------------------~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~ 249 (494)
+.||+|.|++.. ..-.++||...+.. +..|+-+ .|+|... ++
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~-~v 296 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN-GV 296 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET-TT
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc-cc
Confidence 999999998621 01347788887742 3678887 5888743 11
Q ss_pred CCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 250 GPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 250 ~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
+ ..--=|.|+. .+|+||++..++
T Consensus 297 ~-de~ERP~iv~--~~gkyYLFt~s~ 319 (428)
T PF02435_consen 297 N-DELERPHIVF--MNGKYYLFTISH 319 (428)
T ss_dssp B-S-EEEEEEEE--ETTEEEEEEEEE
T ss_pred c-ccccCCcEEE--ECCEEEEEEEec
Confidence 1 1122488864 589999998876
No 85
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=71.95 E-value=65 Score=36.06 Aligned_cols=79 Identities=20% Similarity=0.271 Sum_probs=46.4
Q ss_pred cCCCcccCCccceEECCEEEEEEeeCCCCC-CCCCcEEEEEEecCcc--CeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 011094 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSA-VWGNITWGHAVSADLI--HWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (494)
Q Consensus 125 P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~-~wg~~~WGHA~S~DLv--hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (494)
|..|=+--|+ ++|++|+|.|+|-.-+... .|.+.+ ...+|.+-+ .|.+ |+.+ +. .+.++.|...|+||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k~~~-nyl~t~~s~~G~WsD-pi~l-~~-----~~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYKNAG-NYLVTAESIDGPWSD-PIKL-NG-----SNAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCcccccc-cEEEEecCCCCCccc-ceec-CC-----cCccCCceeecCCC
Confidence 5566666787 8899999999995433322 122211 122332221 2433 1111 11 12578888889999
Q ss_pred eEEEEEeccCC
Q 011094 202 QIVMLYTGSTD 212 (494)
Q Consensus 202 ~~~~~YTG~~~ 212 (494)
+.+|+|-+...
T Consensus 157 r~wlv~~~w~~ 167 (549)
T COG3507 157 RKWLVNGSWDG 167 (549)
T ss_pred CEEEEecccCC
Confidence 99999988754
No 86
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=59.25 E-value=2.1e+02 Score=29.12 Aligned_cols=71 Identities=18% Similarity=0.402 Sum_probs=40.6
Q ss_pred cCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---eeecceeccCCCCc-CCCcEEeeeEEEccCCeEE
Q 011094 131 NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWY-DINGVWTGSATILPDGQIV 204 (494)
Q Consensus 131 NDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvh---W~~~p~AL~Pd~~~-D~~Gv~SGSavv~~dG~~~ 204 (494)
--|. ++|+ +..|.|.||+.+ ......+|+|.-+ |.. |..|..+.-- ...|-..--+| -.+-..|
T Consensus 77 vAP~-vFYFaPk~~W~L~yQwg~-------~~fsY~Ts~DptnpngWSa-pq~lf~g~i~~~~~g~iD~~vI-~D~~n~y 146 (271)
T PF03664_consen 77 VAPQ-VFYFAPKNIWYLAYQWGP-------AAFSYSTSSDPTNPNGWSA-PQPLFSGSISGSGTGPIDQWVI-CDDTNMY 146 (271)
T ss_pred ccce-EEEecCCcEEEEEEecCC-------CcceeecCCCCCCCccCCC-CcccccccccCCCCCceeeEEE-ecCCceE
Confidence 3566 6666 789999999654 3346678888765 653 2223222211 11233333333 3355688
Q ss_pred EEEeccC
Q 011094 205 MLYTGST 211 (494)
Q Consensus 205 ~~YTG~~ 211 (494)
||++|..
T Consensus 147 LFfa~Dn 153 (271)
T PF03664_consen 147 LFFAGDN 153 (271)
T ss_pred EEEcCCC
Confidence 8988864
No 87
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=58.91 E-value=16 Score=31.80 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=24.3
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 011094 29 PASHRKPFKGFAAILASAIFLLSLVALII 57 (494)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (494)
+....|.|..++.|+++++++.+|+++++
T Consensus 10 ~~~~g~sW~~LVGVv~~al~~SlLIalaa 38 (102)
T PF15176_consen 10 PGEGGRSWPFLVGVVVTALVTSLLIALAA 38 (102)
T ss_pred CCCCCcccHhHHHHHHHHHHHHHHHHHHH
Confidence 34447899999999999999999998876
No 88
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=40.97 E-value=2.3e+02 Score=31.43 Aligned_cols=118 Identities=17% Similarity=0.118 Sum_probs=66.8
Q ss_pred cccccccceeeeecCCCcccCCccc-----eEECCEEEEEEeeCCCCCCCCCc-EEEEEEecCccCeeec-c-eeccCCC
Q 011094 112 AMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYNPDSAVWGNI-TWGHAVSADLIHWLYL-P-IAMVPDQ 183 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wg~~-~WGHA~S~DLvhW~~~-p-~AL~Pd~ 183 (494)
.++.|+.----+.|.. | +|=+|. +.++|.--+||..|-....+.+. .=.-|.|+|.++++.- + +.+..-.
T Consensus 79 Dlv~W~~~piaL~Pd~-~-~d~~g~ySGSAV~~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~p~ 156 (486)
T COG1621 79 DLVHWEHLPIALAPDD-D-YDSHGCYSGSAVVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQPE 156 (486)
T ss_pred CcccceECCceecCCC-c-cccCCceeeeEEEeCCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCceecCCC
Confidence 3445544333444443 3 255543 44689999999877665445443 5578999999999983 3 3222211
Q ss_pred CcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEc
Q 011094 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237 (494)
Q Consensus 184 ~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~ 237 (494)
.+ ..-....=++...+|+.+|+--+...+..-.+.+-.|.| |++|+..
T Consensus 157 ~~-t~hFRDPKv~w~~~~~~~~mlgAq~~~~~g~i~lY~S~D-----L~~W~~~ 204 (486)
T COG1621 157 GY-TPHFRDPKVVWDEGGKWWMMLGAQGEDLKGTILLYESDD-----LKNWQFT 204 (486)
T ss_pred cc-cccCCCCcccccCCCcEEEEEEEecCCCCceEEEEeCCC-----ccCcEEE
Confidence 11 122344444556677777765444333222344444555 5899886
No 89
>PF10898 DUF2716: Protein of unknown function (DUF2716); InterPro: IPR020323 This entry represents a group of uncharacterised proteins.
Probab=36.11 E-value=24 Score=32.69 Aligned_cols=36 Identities=25% Similarity=0.599 Sum_probs=27.7
Q ss_pred cccccceeeeecCCCcccCC----ccceEECCEEEEEEee
Q 011094 114 FTWQRTSFHFQPEKNWMNDP----NGPLFYKGWYHLFYQY 149 (494)
Q Consensus 114 ~~w~Rp~~Hf~P~~gwmNDP----NG~~y~~G~YHLFYQ~ 149 (494)
|.||-+-|-|.|..---.|+ .-++|=+|-||+|.+-
T Consensus 81 LDWQH~cy~~~P~~~~~~~e~~~W~vpv~PdGDYyfF~~~ 120 (143)
T PF10898_consen 81 LDWQHECYWFNPHRHAEKDEFGEWPVPVYPDGDYYFFIDK 120 (143)
T ss_pred EecCCCCEEEChhhccccccCCCccccccCCCCeEEEEec
Confidence 68999999999866544332 2377889999999984
No 90
>PF11807 DUF3328: Domain of unknown function (DUF3328); InterPro: IPR021765 This family of proteins are functionally uncharacterised. This family is only found in eukaryotes.
Probab=24.63 E-value=97 Score=28.91 Aligned_cols=11 Identities=18% Similarity=0.643 Sum_probs=4.9
Q ss_pred CCCCCCCchhh
Q 011094 29 PASHRKPFKGF 39 (494)
Q Consensus 29 ~~~~~~~~~~~ 39 (494)
|.+++++++..
T Consensus 3 p~~r~~~w~~~ 13 (217)
T PF11807_consen 3 PRRRRRRWRRL 13 (217)
T ss_pred CCCCCccHHHH
Confidence 33344455444
No 91
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=24.57 E-value=69 Score=28.68 Aligned_cols=11 Identities=18% Similarity=0.066 Sum_probs=6.1
Q ss_pred CCEEEEEEeeC
Q 011094 140 KGWYHLFYQYN 150 (494)
Q Consensus 140 ~G~YHLFYQ~n 150 (494)
+|.||--+...
T Consensus 81 ~g~~~~~~~~~ 91 (130)
T PF12273_consen 81 QGNFHPNPGPP 91 (130)
T ss_pred CCCCCCCCCCC
Confidence 46676654443
No 92
>PF12111 PNPase_C: Polyribonucleotide phosphorylase C terminal; InterPro: IPR021968 PNPase regulates the expression of small non-coding RNAs that control expression of outer-membrane proteins. The enzyme also affects complex processes, such as the tissue-invasive virulence of Salmonella enterica and the regulation of a virulence-factor secretion system in Yersinia. In Escherichia coli, PNPase is involved in the quality control of ribosomal RNA precursors and is required for growth following cold shock. This family contains the C-terminal protomer domain of the PNPase core. The function of the C-terminal protomer is to catalyse phosphorolysis through its two active sites [].; PDB: 3H1C_S 3GCM_F 3GME_D.
Probab=24.52 E-value=25 Score=25.53 Aligned_cols=12 Identities=33% Similarity=0.847 Sum_probs=0.0
Q ss_pred ccccceeeeecC
Q 011094 115 TWQRTSFHFQPE 126 (494)
Q Consensus 115 ~w~Rp~~Hf~P~ 126 (494)
+||||.|.|.-.
T Consensus 7 ~W~rp~y~F~GK 18 (39)
T PF12111_consen 7 EWQRPAYYFYGK 18 (39)
T ss_dssp ------------
T ss_pred cccccccccccc
Confidence 699999999754
No 93
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=21.94 E-value=3.1e+02 Score=30.75 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=44.3
Q ss_pred cCCeEEEEEeccCCC---ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCC-CCCCCCCeeEeecCCCeEEEEEee
Q 011094 199 PDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG-PKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 199 ~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~-~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
.+|.++|||-=+-++ +..+=+.|+|+| |++|+.+ .|-|.|....+ ...|---.|+ ..+|.=.|+..+
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~l--p~Ai~Ps~~~ding~wSGSati--~~~~~~vilytg 138 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEAL--PPAIAPSEWFDINGCWSGSATI--DPNNSPVILYTG 138 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchh-----hcccccc--CcccCCCCccccCccccceEEE--ccCCCeEEEecc
Confidence 589999999866443 345567899999 4999987 35555432110 0112222231 345555555544
Q ss_pred ecCCeeEEEEEE
Q 011094 275 KIGKTGISLVYQ 286 (494)
Q Consensus 275 ~~~~~G~v~lY~ 286 (494)
-..+..++..|.
T Consensus 139 ~d~~~rqVqn~a 150 (571)
T KOG0228|consen 139 IDPNNRQVQNYA 150 (571)
T ss_pred cCcCceEEEEEe
Confidence 333335555554
No 94
>PF09601 DUF2459: Protein of unknown function (DUF2459); InterPro: IPR011727 This conserved hypothetical protein of unknown function is predominantly found in proteobacteria. Its function is unknown and its genome context is not well-conserved. It is found amid urease genes in at least one species.
Probab=21.29 E-value=56 Score=31.10 Aligned_cols=20 Identities=35% Similarity=0.725 Sum_probs=15.1
Q ss_pred CCccceEE-CCEEEEEEeeCC
Q 011094 132 DPNGPLFY-KGWYHLFYQYNP 151 (494)
Q Consensus 132 DPNG~~y~-~G~YHLFYQ~nP 151 (494)
.++..+|. +|.|||||.||-
T Consensus 130 ~~~d~Fy~A~G~Y~l~~TCNt 150 (173)
T PF09601_consen 130 GPDDAFYEAKGRYSLFNTCNT 150 (173)
T ss_pred CCCCeeEeeccceEeecCcHH
Confidence 34455664 999999999984
Done!