BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011096
(493 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 225/483 (46%), Gaps = 57/483 (11%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHG-----LRDLSKKYGPLMLLQLGEVPTIIVSSPEVAK 94
P LP++G+L LP HG L KKYGP+ +++G T+IV ++AK
Sbjct: 10 PKSLLSLPLVGSL----PFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAK 65
Query: 95 EVMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSEL-LSAKRVQSFQ 153
EV+ F+ RP I S N + I F+ G W+ R++ ++ L Q +
Sbjct: 66 EVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLE 125
Query: 154 SIREAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQEAFVAVIEETTK 213
I E+S L + +++ G I+++ V + + S F ++ + + VI+
Sbjct: 126 KIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQ---- 181
Query: 214 VISGFNIADVETLHQEGV-------RIVENIINEHKKRKATLKN-------------CKT 253
+N ++ L ++ + +I N E K ++N ++
Sbjct: 182 ---NYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRS 238
Query: 254 GDDEDLVDVLLKIQGHGD-------LDSFLTTD-HIKAVISDIFAAGSETSATTVDWAMC 305
+++D L++ + + D DS L +D HI I DIF AG ET+ + V W +
Sbjct: 239 DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLA 298
Query: 306 EMMKNPRVMKKAQAEVREV--FHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRE 363
++ NP+V KK E+ + F RT +++ + + L+ ++E LRL P AP+LIP +
Sbjct: 299 FLLHNPQVKKKLYEEIDQNVGFSRTPTISDR--NRLLLLEATIREVLRLRPVAPMLIPHK 356
Query: 364 CGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHS-VDYKGTNFEYIP 422
I F + VI+N WA+ + + W +P+ F+PERFL+ + + Y+P
Sbjct: 357 ANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLP 416
Query: 423 FGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIKHEDLD-------MTEAFGVTVR 475
FGAG R C G + L +A LL FD ++P+ + L+ + ++F V ++
Sbjct: 417 FGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIK 476
Query: 476 RKQ 478
+Q
Sbjct: 477 VRQ 479
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 219/481 (45%), Gaps = 48/481 (9%)
Query: 31 QTNNRISNPPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSP 90
+T+++ PPGPW P+IG++ L G PH L +S++YG ++ +++G P +++S
Sbjct: 4 KTSSKGLKNPPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGL 62
Query: 91 EVAKEVMKTHDVVFASRPHFPAAQILSYNYRDIIFS-SYGDSWKQLRKICVSEL----LS 145
+ ++ + F RP ++S N + + FS G W R++ + L ++
Sbjct: 63 DTIRQALVRQGDDFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRLAQNGLKSFSIA 121
Query: 146 AKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRA------AFGNR-- 197
+ S E VS + S ++ + + Y + S FG R
Sbjct: 122 SDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYD 181
Query: 198 --SRDQEAFVAVIEETTKVISGFNIADV---------------ETLHQEGVRIVENIINE 240
++ + V + +V+ N AD + L+++ ++ ++ E
Sbjct: 182 HNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKE 241
Query: 241 HKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSF----LTTDHIKAVISDIFAAGSETS 296
H K + G D+ D L++ LD L+ + I ++ D+F AG +T
Sbjct: 242 H------YKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTV 295
Query: 297 ATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAA 356
T + W++ ++ NPRV +K Q E+ V R+ + + + +++ + ET R
Sbjct: 296 TTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFV 355
Query: 357 PLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFL--DHSVDYK 414
P IP + + GF IP V VN W I D + W P F+PERFL D ++D K
Sbjct: 356 PFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-K 414
Query: 415 GTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTV 474
+ + I FG G+R C G + V L LA+LL ++ +P G+K +DMT +G+T+
Sbjct: 415 VLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK---VDMTPIYGLTM 471
Query: 475 R 475
+
Sbjct: 472 K 472
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 204/473 (43%), Gaps = 51/473 (10%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PP PW P++G++ L G PH L +S++YG ++ +++G P +++S + ++ +
Sbjct: 18 PPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSEL----LSAKRVQSFQSI 155
F RP + +++ + G W R++ + L +++ S
Sbjct: 77 QGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCY 136
Query: 156 REAEVSDLINWISSK-----AGS---------VINLTQNVHSLMYGITSRAAFGNRSRDQ 201
E VS + S+ AG V+++ + ++ +G F S +
Sbjct: 137 LEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFG----QHFPESSDEM 192
Query: 202 EAFVAVIEETTKVISGFNIADV---------------ETLHQEGVRIVENIINEHKKRKA 246
+ V E + S N D + +Q + ++ + EH
Sbjct: 193 LSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEH----- 247
Query: 247 TLKNCKTGDDEDLVDVLLKIQGHGDLDS--FLTTDHIKAVISDIFAAGSETSATTVDWAM 304
++ D+ L K G S + + I +++DIF AG +T T + W++
Sbjct: 248 -YQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSL 306
Query: 305 CEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPREC 364
++ P + +K Q E+ V R + + ++ +L+ + ET R P IP
Sbjct: 307 MYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHST 366
Query: 365 GQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFL--DHSVDYKGTNFEYIP 422
+ +NGF IP K V VN W + DPE W +P F PERFL D + K + + +
Sbjct: 367 TRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMML 426
Query: 423 FGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVR 475
FG G+R C G + L LA+LL ++ +P G+K +D+T +G+T++
Sbjct: 427 FGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTMK 476
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 195/435 (44%), Gaps = 32/435 (7%)
Query: 42 GPWKL------PVI-GNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAK 94
G WKL P++ G L+ L +LP H L L++K GP+ L+LG ++++S +
Sbjct: 21 GRWKLRNLHLPPLVPGFLHLLQPNLPIH-LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIE 79
Query: 95 EVMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQSFQS 154
E M V FA RP P+ +++S +DI Y WK +K+ S LL R S +
Sbjct: 80 EAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEP 138
Query: 155 IREAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQ-EAFVAVIEETTK 213
+ + + +AG+ + + + L I FGN+ AF +++ K
Sbjct: 139 WVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMK 198
Query: 214 VISGFNIADVETLH------QEGV-RIVENIINEHKKRKATLKNCK----TGDDEDLVDV 262
++I ++ + G+ R+ + I N + L+ K G D+ D
Sbjct: 199 TWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDY 258
Query: 263 LLKIQGHGDLDSF---LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQA 319
+L+ G ++ L H+ + D+F G+ET+A+T+ WA+ ++ +P + ++ Q
Sbjct: 259 MLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQE 318
Query: 320 EV-REVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
E+ RE+ +V + L + E LRL P PL +P + I G+DIP
Sbjct: 319 ELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIP 378
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
VI N D W +P F P+RFL+ G N + FG G R+C G S
Sbjct: 379 EGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE-----PGANPSALAFGCGARVCLGESLA 433
Query: 437 LASVELPLAMLLYHF 451
+ + LA LL F
Sbjct: 434 RLELFVVLARLLQAF 448
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 206/446 (46%), Gaps = 50/446 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGL----RDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEV 96
PGP LP +GN+ H G + KKYG + G+ P + ++ P++ K V
Sbjct: 17 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 71
Query: 97 M--KTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQSFQS 154
+ + + V RP P + + I + + WK+LR + S K +
Sbjct: 72 LVKECYSVFTNRRPFGPVGFM-----KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPI 126
Query: 155 IREAEVSD-LINWISSKA--GSVINLTQNVHSLMYGITSRAAFG----NRSRDQEAFVAV 207
I A+ D L+ + +A G + L + + + +FG + + Q+ FV
Sbjct: 127 I--AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV-- 182
Query: 208 IEETTKVISGFNIAD----VETLHQEGVRIVE---------NIINEHKKRKATLKNCKTG 254
E TK + F+ D T+ + I+E + N +K +K +
Sbjct: 183 --ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 240
Query: 255 DDE----DLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFA--AGSETSATTVDWAMCEMM 308
D + D + +++ Q + +S ++ V I AG ET+++ + + M E+
Sbjct: 241 DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 300
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRC 368
+P V +K Q E+ V ++ +M++L +VV ETLRL P A + + R C +
Sbjct: 301 THPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDV 359
Query: 369 QINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRR 428
+ING IP V++ ++A+ RDP+YWTEPE F+PERF + D + Y PFG+G R
Sbjct: 360 EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPR 418
Query: 429 ICPGMSFGLASVELPLAMLLYHFDWK 454
C GM F L +++L L +L +F +K
Sbjct: 419 NCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 206/446 (46%), Gaps = 50/446 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGL----RDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEV 96
PGP LP +GN+ H G + KKYG + G+ P + ++ P++ K V
Sbjct: 19 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 73
Query: 97 M--KTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQSFQS 154
+ + + V RP P + + I + + WK+LR + S K +
Sbjct: 74 LVKECYSVFTNRRPFGPVGFM-----KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPI 128
Query: 155 IREAEVSD-LINWISSKA--GSVINLTQNVHSLMYGITSRAAFG----NRSRDQEAFVAV 207
I A+ D L+ + +A G + L + + + +FG + + Q+ FV
Sbjct: 129 I--AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV-- 184
Query: 208 IEETTKVISGFNIAD----VETLHQEGVRIVE---------NIINEHKKRKATLKNCKTG 254
E TK + F+ D T+ + I+E + N +K +K +
Sbjct: 185 --ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 242
Query: 255 DDE----DLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFA--AGSETSATTVDWAMCEMM 308
D + D + +++ Q + +S ++ V I AG ET+++ + + M E+
Sbjct: 243 DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 302
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRC 368
+P V +K Q E+ V ++ +M++L +VV ETLRL P A + + R C +
Sbjct: 303 THPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDV 361
Query: 369 QINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRR 428
+ING IP V++ ++A+ RDP+YWTEPE F+PERF + D + Y PFG+G R
Sbjct: 362 EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPR 420
Query: 429 ICPGMSFGLASVELPLAMLLYHFDWK 454
C GM F L +++L L +L +F +K
Sbjct: 421 NCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 206/446 (46%), Gaps = 50/446 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGL----RDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEV 96
PGP LP +GN+ H G + KKYG + G+ P + ++ P++ K V
Sbjct: 18 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 72
Query: 97 M--KTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQSFQS 154
+ + + V RP P + + I + + WK+LR + S K +
Sbjct: 73 LVKECYSVFTNRRPFGPVGFM-----KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPI 127
Query: 155 IREAEVSD-LINWISSKA--GSVINLTQNVHSLMYGITSRAAFG----NRSRDQEAFVAV 207
I A+ D L+ + +A G + L + + + +FG + + Q+ FV
Sbjct: 128 I--AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV-- 183
Query: 208 IEETTKVISGFNIAD----VETLHQEGVRIVE---------NIINEHKKRKATLKNCKTG 254
E TK + F+ D T+ + I+E + N +K +K +
Sbjct: 184 --ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 241
Query: 255 DDE----DLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFA--AGSETSATTVDWAMCEMM 308
D + D + +++ Q + +S ++ V I AG ET+++ + + M E+
Sbjct: 242 DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 301
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRC 368
+P V +K Q E+ V ++ +M++L +VV ETLRL P A + + R C +
Sbjct: 302 THPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDV 360
Query: 369 QINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRR 428
+ING IP V++ ++A+ RDP+YWTEPE F+PERF + D + Y PFG+G R
Sbjct: 361 EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPR 419
Query: 429 ICPGMSFGLASVELPLAMLLYHFDWK 454
C GM F L +++L L +L +F +K
Sbjct: 420 NCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 216/474 (45%), Gaps = 38/474 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP P+IGN+ Q+ L S+ YGP+ + LG PT+++ E KE +
Sbjct: 12 PPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
FA R P + +S I FS+ +WK++R+ + L + KR S +
Sbjct: 72 LGEEFAGRGSVPILEKVSKGL-GIAFSN-AKTWKEMRRFSLMTLRNFGMGKR--SIEDRI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR-SRDQEAFVAVIEET---- 211
+ E L+ + S + T + + F NR E F+ ++E
Sbjct: 128 QEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHENV 187
Query: 212 -------TKVISGF-----NIADVETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
+V + F + + ++N I E K L + + D
Sbjct: 188 ELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLD--VNNPRDF 245
Query: 260 VDV-LLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQ 318
+D L+K++ +L+ T + + +SD+F AG+ET++TT+ +++ ++K+P V + Q
Sbjct: 246 IDCFLIKMEQENNLE--FTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQ 303
Query: 319 AEVREVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
E+ V HR+ + + S M + V+ E R P +P + + + IP
Sbjct: 304 EEIERVIGRHRSPCMQDRS--RMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIP 361
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
+I + ++ D + + P+ F P FLD S ++K +++ ++PF AG+R+C G G
Sbjct: 362 KGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGE--G 418
Query: 437 LASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFG--VTVRRKQDLCMTPIPYH 488
LA +EL L + ++KL + ++ +DLD+T V+V LC PI +H
Sbjct: 419 LARMELFLFLTSILQNFKLQSLVEPKDLDITAVVNGFVSVPPSYQLCFIPIHHH 472
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 194/448 (43%), Gaps = 31/448 (6%)
Query: 51 NLYQLAGS--LPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRP 108
N+Y LA S LPH +R S+ YG + L LG + T++++ +V KE + +FA RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 109 HFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQ-SFQSIREAEVSDLINWI 167
P ++ ++ S YG W R++ V+ Q SF+S E + I
Sbjct: 85 CLPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI 143
Query: 168 SSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQEAFVAVIEETTKVISGFNIADV 223
+ G + Q + + + IT+ FG R D + + + E ++ + ++
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 224 ETL----------HQEGVR---IVENIINEHKKRKATLKNCKTGDDEDLVDVLLK--IQG 268
HQ+ R +V + ++ ++ + N K + VD L QG
Sbjct: 204 NAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASV--NRKPQLPQHFVDAYLDEMDQG 261
Query: 269 HGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRT 328
D S + +++ + ++ AG+ET+ + WA+ M P + + Q E+ +
Sbjct: 262 KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN 321
Query: 329 GKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAI 388
GK + +M + + V+ E LR PL I + + G+ IP VI N +++
Sbjct: 322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 389 GRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
D +YW +PE F PERFLD S Y +PF GRR C G + L LL
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
Query: 449 YHFDWKLPNGIKHEDL-DMTEAFGVTVR 475
F P HE + D+ G+T++
Sbjct: 441 QRFHLHFP----HELVPDLKPRLGMTLQ 464
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 194/448 (43%), Gaps = 31/448 (6%)
Query: 51 NLYQLAGS--LPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRP 108
N+Y LA S LPH +R S+ YG + L LG + T++++ +V KE + +FA RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 109 HFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQ-SFQSIREAEVSDLINWI 167
P ++ ++ S YG W R++ V+ Q SF+S E + I
Sbjct: 85 CLPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI 143
Query: 168 SSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQEAFVAVIEETTKVISGFNIADV 223
+ G + Q + + + IT+ FG R D + + + E ++ + ++
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 224 ETL----------HQEGVR---IVENIINEHKKRKATLKNCKTGDDEDLVDVLLK--IQG 268
HQ+ R +V + ++ ++ + N K + VD L QG
Sbjct: 204 NAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASV--NRKPQLPQHFVDAYLDEMDQG 261
Query: 269 HGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRT 328
D S + +++ + ++ AG+ET+ + WA+ M P + + Q E+ +
Sbjct: 262 KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN 321
Query: 329 GKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAI 388
GK + +M + + V+ E LR PL I + + G+ IP VI N +++
Sbjct: 322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 389 GRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
D +YW +PE F PERFLD S Y +PF GRR C G + L LL
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
Query: 449 YHFDWKLPNGIKHEDL-DMTEAFGVTVR 475
F P HE + D+ G+T++
Sbjct: 441 QRFHLHFP----HELVPDLKPRLGMTLQ 464
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 213/480 (44%), Gaps = 47/480 (9%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPVIGN+ Q+ L +LSK YGP+ L G +++ EV KE +
Sbjct: 13 PPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALID 72
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R HFP A+ + + I+FS+ G WK++R+ + L + KR S +
Sbjct: 73 LGEEFSGRGHFPLAERANRGF-GIVFSN-GKRWKEIRRFSLMTLRNFGMGKR--SIEDRV 128
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQEAFVAVIEETTKV 214
+ E L+ + S + T + + F R +DQ+ F+ ++E+ +
Sbjct: 129 QEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQ-FLNLMEKLNEN 187
Query: 215 ISGFNIADVETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGD--- 271
I + ++ + I++ H K LKN + D+L K++ H +
Sbjct: 188 IRIVSTPWIQICNNFPT-IIDYFPGTHNK---LLKNLAFMES----DILEKVKEHQESMD 239
Query: 272 -------LDSFL--------------TTDHIKAVISDIFAAGSETSATTVDWAMCEMMKN 310
+D FL T +++ +D+ AG+ET++TT+ +A+ ++K+
Sbjct: 240 INNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKH 299
Query: 311 PRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQI 370
P V K Q E+ V R M + VV E R P +P +
Sbjct: 300 PEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKF 359
Query: 371 NGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRIC 430
+ IP ++ + ++ D + + PE F P FLD ++K +N+ ++PF AG+RIC
Sbjct: 360 RNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRIC 418
Query: 431 PGMSFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFG--VTVRRKQDLCMTPIPYH 488
G GLA +EL L + ++ L + I +DLD T +V LC PI +H
Sbjct: 419 VGE--GLARMELFLFLTFILQNFNLKSLIDPKDLDTTPVVNGFASVPPFYQLCFIPIHHH 476
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 204/471 (43%), Gaps = 40/471 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP+ P+IGN + G H L+++YG + ++LG P ++++ + +
Sbjct: 11 PPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSEL--LSAKRVQSFQSIRE 157
FA RP F + +++S R + F Y + WK R+ S + ++ +S Q +
Sbjct: 70 QGSAFADRPSFASFRVVSGG-RSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEG 128
Query: 158 ---AEVSDLINWI--SSKAGSVINLTQNVHSLMYGITSRAAFGNR-SRDQEAFVAVI--- 208
+E +L+ + S G+ ++ + + S FG R S D F ++
Sbjct: 129 HVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHN 188
Query: 209 EETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKAT---------LKNCKT----GD 255
EE + + ++ DV Q V + E ++ L++C++
Sbjct: 189 EEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAA 248
Query: 256 DEDLVDVLL-----KIQG--HGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMM 308
D++D + K G HG + L +++ A I+DIF A +T +T + W +
Sbjct: 249 PRDMMDAFILSAEKKAAGDSHGG-GARLDLENVPATITDIFGASQDTLSTALQWLLLLFT 307
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRC 368
+ P V + QAE+ +V R + ++ + E +R P+ IP
Sbjct: 308 RYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANT 367
Query: 369 QINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDH-SVDYKGTNFEYIPFGAGR 427
+ G+ IP V VN W++ DP W PE+F P RFLD + K + F G+
Sbjct: 368 SVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGK 427
Query: 428 RICPGMSFGLASVELPLAMLLYHFDWKL-PNGIKHEDLDMTEAFGVTVRRK 477
R C G + L +++L + D++ PN E M ++G+T++ K
Sbjct: 428 RRCIGEELSKMQLFLFISILAHQCDFRANPN----EPAKMNFSYGLTIKPK 474
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 208/454 (45%), Gaps = 39/454 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPV+GNL Q+ L +KYG + + LG P +++ + +E +
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y +IF++ G+ W+ LR+ ++ + KR S +
Sbjct: 72 QAEAFSGRGKIAVVDPIFQGY-GVIFAN-GERWRALRRFSLATMRDFGMGKR--SVEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQE-AFVAVIE------ 209
+ E L+ + G++++ T HS+ I FG R ++ F+ +++
Sbjct: 128 QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSF 187
Query: 210 --------ETTKVISGFNIADVETLHQEGVRIVENI---INEH-KKRKATLKNCKTGDDE 257
+ ++ SGF + H++ R ++ I I + +K +ATL +
Sbjct: 188 SLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD---PSNPR 243
Query: 258 DLVDV-LLKIQ-GHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
D +DV LL+++ D S ++ + +FAAG+ET++TT+ + M+K P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 316 KAQAEVREVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGF 373
+ Q E+ +V HR +++ + +M + V+ E RL P +P + Q G+
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 374 DIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
IP V + DP Y+ P +F P FLD + K N ++PF G+RIC G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE 420
Query: 434 SFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMT 467
G+A EL L ++ + + + ED+D+T
Sbjct: 421 --GIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 213/473 (45%), Gaps = 33/473 (6%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPVIGN+ Q+ L +LSK YGP+ L G P +++ E KE +
Sbjct: 13 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 72
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R FP A+ + + I+FS+ G WK++R+ + L + KR S +
Sbjct: 73 LGEEFSGRGIFPLAERANRGF-GIVFSN-GKKWKEIRRFSLMTLRNFGMGKR--SIEDRV 128
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQEAFVAVIE---ET 211
+ E L+ + S + T + + F R +DQ+ F+ ++E E
Sbjct: 129 QEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQ-FLNLMEKLNEN 187
Query: 212 TKVISG--FNIAD-----VETLHQEGVRIVENIINEH----KKRKATLKNCKTGDDEDLV 260
K++S I + ++ ++++N+ +K K ++ + +D +
Sbjct: 188 IKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFI 247
Query: 261 DVLL---KIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D L + + H F T + ++ D+F AG+ET++TT+ +A+ ++K+P V K
Sbjct: 248 DCFLMKMEKEKHNQPSEF-TIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKV 306
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
Q E+ V R M + VV E R P +P + + IP
Sbjct: 307 QEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPK 366
Query: 378 KARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 437
++++ ++ D + + PE F P FLD ++K + + ++PF AG+RIC G +
Sbjct: 367 GTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAG 425
Query: 438 ASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFG--VTVRRKQDLCMTPIPYH 488
+ L L +L +F+ K + + ++LD T +V LC PI +H
Sbjct: 426 MELFLFLTSILQNFNLK--SLVDPKNLDTTPVVNGFASVPPFYQLCFIPIHHH 476
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 207/454 (45%), Gaps = 39/454 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPV+GNL Q+ L +KYG + + LG P +++ + +E +
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y +IF++ G+ W+ LR+ ++ + KR S +
Sbjct: 72 QAEAFSGRGKIAVVDPIFQGY-GVIFAN-GERWRALRRFSLATMRDFGMGKR--SVEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQE-AFVAVIE------ 209
+ E L+ + G++++ T HS+ I FG R ++ F+ +++
Sbjct: 128 QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSF 187
Query: 210 --------ETTKVISGFNIADVETLHQEGVRIVENI---INEH-KKRKATLKNCKTGDDE 257
+ ++ SGF + H++ R ++ I I + +K +ATL +
Sbjct: 188 SLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD---PSNPR 243
Query: 258 DLVDV-LLKIQ-GHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
D +DV LL+++ D S ++ + +F AG+ET++TT+ + M+K P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 316 KAQAEVREVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGF 373
+ Q E+ +V HR +++ + +M + V+ E RL P +P + Q G+
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 374 DIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
IP V + DP Y+ P +F P FLD + K N ++PF G+RIC G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICAGE 420
Query: 434 SFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMT 467
G+A EL L ++ + + + ED+D+T
Sbjct: 421 --GIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 207/454 (45%), Gaps = 39/454 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPV+GNL Q+ L +KYG + + LG P +++ + +E +
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y +IF++ G+ W+ LR+ ++ + KR S +
Sbjct: 72 QAEAFSGRGKIAVVDPIFQGY-GVIFAN-GERWRALRRFSLATMRDFGMGKR--SVEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQE-AFVAVIE------ 209
+ E L+ + G++++ T HS+ I FG R ++ F+ +++
Sbjct: 128 QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSF 187
Query: 210 --------ETTKVISGFNIADVETLHQEGVRIVENI---INEH-KKRKATLKNCKTGDDE 257
+ ++ SGF + H++ R ++ I I + +K +ATL +
Sbjct: 188 SLISSFSSQVFELFSGF-LKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLD---PSNPR 243
Query: 258 DLVDV-LLKIQ-GHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
D +DV LL+++ D S ++ + +F AG+ET++TT+ + M+K P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 316 KAQAEVREVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGF 373
+ Q E+ +V HR +++ + +M + V+ E RL P +P + Q G+
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 374 DIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
IP V + DP Y+ P +F P FLD + K N ++PF G+RIC G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE 420
Query: 434 SFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMT 467
G+A EL L ++ + + + ED+D+T
Sbjct: 421 --GIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 207/454 (45%), Gaps = 39/454 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPV+GNL Q+ L +KYG + + LG P +++ + +E +
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y +IF++ G+ W+ LR+ ++ + KR S +
Sbjct: 72 QAEAFSGRGKIAVVDPIFQGY-GVIFAN-GERWRALRRFSLATMRDFGMGKR--SVEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQE-AFVAVIE------ 209
+ E L+ + G++++ T HS+ I FG R ++ F+ +++
Sbjct: 128 QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSF 187
Query: 210 --------ETTKVISGFNIADVETLHQEGVRIVENI---INEH-KKRKATLKNCKTGDDE 257
+ ++ SGF + H++ R ++ I I + +K +ATL +
Sbjct: 188 SLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD---PSNPR 243
Query: 258 DLVDV-LLKIQ-GHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
D +DV LL+++ D S ++ + +F AG+ET++TT+ + M+K P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 316 KAQAEVREVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGF 373
+ Q E+ +V HR +++ + +M + V+ E RL P +P + Q G+
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 374 DIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
IP V + DP Y+ P +F P FLD + K N ++PF G+RIC G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE 420
Query: 434 SFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMT 467
G+A EL L ++ + + + ED+D+T
Sbjct: 421 --GIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 207/454 (45%), Gaps = 39/454 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPV+GNL Q+ L +KYG + + LG P +++ + +E +
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y +IF++ G+ W+ LR+ ++ + KR S +
Sbjct: 72 QAEAFSGRGKIAVVDPIFQGY-GVIFAN-GERWRALRRFSLATMRDFGMGKR--SVEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQE-AFVAVIE------ 209
+ E L+ + G++++ T HS+ I FG R ++ F+ +++
Sbjct: 128 QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSF 187
Query: 210 --------ETTKVISGFNIADVETLHQEGVRIVENI---INEH-KKRKATLKNCKTGDDE 257
+ ++ SGF + H++ R ++ I I + +K +ATL +
Sbjct: 188 SLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD---PSNPR 243
Query: 258 DLVDV-LLKIQ-GHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
D +DV LL+++ D S ++ + +F AG+ET++TT+ + M+K P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 316 KAQAEVREVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGF 373
+ Q E+ +V HR +++ + +M + V+ E RL P +P + Q G+
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 374 DIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
IP V + DP Y+ P +F P FLD + K N ++PF G+RIC G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE 420
Query: 434 SFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMT 467
G+A EL L ++ + + + ED+D+T
Sbjct: 421 --GIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 211/475 (44%), Gaps = 37/475 (7%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LPVIGN+ Q+ L +LSK YGP+ L G P +++ E KE +
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R FP A+ + + I+FS+ G WK++R+ + L + KR S +
Sbjct: 71 LGEEFSGRGIFPLAERANRGF-GIVFSN-GKKWKEIRRFSLMTLRNFGMGKR--SIEDRV 126
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQEAFVAVIEETTKV 214
+ E L+ + S + T + + F R +DQ+ F+ ++E+ +
Sbjct: 127 QEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQ-FLNLMEKLNEN 185
Query: 215 ISGFNIADVETLHQ----------------EGVRIVENIINEHKKRKATLKNCKTGDDED 258
I + ++ + + V +++ I E K K ++ + +D
Sbjct: 186 IEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILE--KVKEHQESMDMNNPQD 243
Query: 259 LVDVLL---KIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
+D L + + H F T + ++ D+F AG+ET++TT+ +A+ ++K+P V
Sbjct: 244 FIDCFLMKMEKEKHNQPSEF-TIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTA 302
Query: 316 KAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDI 375
K Q E+ V R M + VV E R P +P + + I
Sbjct: 303 KVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLI 362
Query: 376 PVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSF 435
P ++++ ++ D + + PE F P FLD ++K + + ++PF AG+RIC G +
Sbjct: 363 PKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEAL 421
Query: 436 GLASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFG--VTVRRKQDLCMTPIPYH 488
+ L L +L +F+ K + + ++LD T +V LC P+ +H
Sbjct: 422 AGMELFLFLTSILQNFNLK--SLVDPKNLDTTPVVNGFASVPPFYQLCFIPVHHH 474
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 214/477 (44%), Gaps = 42/477 (8%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP+ LP+IGNL+QL L++++GP+ L +G +++ + KE +
Sbjct: 12 PPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS-AKRVQSFQSIREA 158
+ F+ R PA ++ R IIF++ G +WK +R+ ++ L + Q +S +
Sbjct: 72 YKDEFSGRGDLPAFH--AHRDRGIIFNN-GPTWKDIRRFSLTTLRNYGMGKQGNESRIQR 128
Query: 159 EVSDLINWISSKAGSVINLTQNVH----SLMYGITSRAAFGNRSRDQEAFVAVIEETTKV 214
E L+ + G + T + +++ I R F + + E +
Sbjct: 129 EAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHL 188
Query: 215 ISG-----FN--IADVETLHQEGVRIVENI----------INEHKKRKATLKNCKTGDDE 257
+S +N + + L ++++N+ + EH ++ NC
Sbjct: 189 LSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEH--HQSLDPNCP----R 242
Query: 258 DLVDVLL---KIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVM 314
DL D LL + + H + T D I ++D+F AG+ET++TT+ + + +MK P +
Sbjct: 243 DLTDCLLVEMEKEKHS-AERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIE 301
Query: 315 KKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFD 374
+K E+ V + EM ++ VV E R P +P E + G+
Sbjct: 302 EKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYL 361
Query: 375 IPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
IP V+ ++ D + + +PE F PE FL+ + +K +++ + PF G+R+C G
Sbjct: 362 IPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTGKRVCAGEG 420
Query: 435 FGLASVELPLAMLLYHFDWKLPNGIKHEDLDMTE---AFGVTVRRKQDLCMTPIPYH 488
+ L L +L HF+ K + +D+D++ FG R + LC+ P +H
Sbjct: 421 LARMELFLLLCAILQHFNLK--PLVDPKDIDLSPIHIGFGCIPPRYK-LCVIPRSHH 474
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 191/447 (42%), Gaps = 32/447 (7%)
Query: 67 LSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRD--II 124
L +++G + LQL P ++++ +E + TH A RP P QIL + R +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 125 FSSYGDSWKQLRKICVSELLS-AKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHS 183
+ YG +W++ R+ VS L + +S + E + L ++ +G +
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 184 LMYGITSRAAFGNR-SRDQEAFVAVI---EETTKVISGF---------NIADVETLHQEG 230
+ + + G R D F+ ++ +E K SGF + + L +
Sbjct: 159 AVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKV 218
Query: 231 VRI-------VENIINEHKKRKATLKNCKTGDDEDLVDVLLKI--QGHGDLDSFLTTDHI 281
+R ++ ++ EH+ + + DL + L + G+ +S +++
Sbjct: 219 LRFQKAFLTQLDELLTEHRMTWDPAQPPR-----DLTEAFLAEMEKAKGNPESSFNDENL 273
Query: 282 KAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKF 341
+ V++D+F+AG T++TT+ W + M+ +P V ++ Q E+ +V + + M +
Sbjct: 274 RIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPY 333
Query: 342 LKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESF 401
V+ E R PL + + ++ GF IP +I N ++ +D W +P F
Sbjct: 334 TTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRF 393
Query: 402 IPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIKH 461
PE FLD + ++PF AGRR C G + L LL HF + +P G
Sbjct: 394 HPEHFLDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPR 452
Query: 462 EDLDMTEAFGVTVRRKQDLCMTPIPYH 488
AF V+ +LC P +H
Sbjct: 453 PSHHGVFAFLVSP-SPYELCAVPRHHH 478
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 190/447 (42%), Gaps = 32/447 (7%)
Query: 67 LSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRD--II 124
L +++G + LQL P ++++ +E + TH A RP P QIL + R +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 125 FSSYGDSWKQLRKICVSELLS-AKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHS 183
+ YG +W++ R+ VS L + +S + E + L ++ +G +
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 184 LMYGITSRAAFGNR-SRDQEAFVAVI---EETTKVISGF-----NIADVET--------- 225
+ + + G R D F+ ++ +E K SGF N V+
Sbjct: 159 AVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHIPALAGKV 218
Query: 226 --LHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKI--QGHGDLDSFLTTDHI 281
+ + ++ ++ EH+ + + DL + L + G+ +S +++
Sbjct: 219 LRFQKAFLTQLDELLTEHRMTWDPAQPPR-----DLTEAFLAEMEKAKGNPESSFNDENL 273
Query: 282 KAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKF 341
+ V++D+F+AG T++TT+ W + M+ +P V ++ Q E+ +V + + M +
Sbjct: 274 RIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPY 333
Query: 342 LKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESF 401
V+ E R PL + + ++ GF IP +I N ++ +D W +P F
Sbjct: 334 TTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRF 393
Query: 402 IPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIKH 461
PE FLD + ++PF AGRR C G + L LL HF + +P G
Sbjct: 394 HPEHFLDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPR 452
Query: 462 EDLDMTEAFGVTVRRKQDLCMTPIPYH 488
AF V+ +LC P +H
Sbjct: 453 PSHHGVFAFLVSP-SPYELCAVPRHHH 478
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 209/475 (44%), Gaps = 37/475 (7%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LP+IGN+ Q+ + SK YGP+ + G P ++ E KE +
Sbjct: 12 PPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALID 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
+ F+ R + P +Q ++ I SS G WK++R+ ++ L + KR S +
Sbjct: 72 NGEEFSGRGNSPISQRITKGLG--IISSNGKRWKEIRRFSLTTLRNFGMGKR--SIEDRV 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR------------SRDQEAF 204
+ E L+ + S + T + + F R R E F
Sbjct: 128 QEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENF 187
Query: 205 VAVIEETTKVISGFNIADVETLHQEGVRIVENI------INEH-KKRKATLKNCKTGDDE 257
+ +V + F + ++ ++++N+ I E K+ +A+L +
Sbjct: 188 RILNSPWIQVCNNFPLL-IDCFPGTHNKVLKNVALTRSYIREKVKEHQASLD---VNNPR 243
Query: 258 DLVDV-LLKIQGHGD-LDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
D +D L+K++ D S +++ ++D+F AG+ET++TT+ + + ++K+P V
Sbjct: 244 DFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTA 303
Query: 316 KAQAEVREVF--HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGF 373
K Q E+ V HR+ + + S M + VV E R P +P + +
Sbjct: 304 KVQEEIDHVIGRHRSPCMQDRS--HMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNY 361
Query: 374 DIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
IP ++ ++ D + + P F P FLD + ++K +++ ++PF AG+RIC G
Sbjct: 362 LIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGE 420
Query: 434 SFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLCMTPIPYH 488
+ L L +L +F+ K + +K+ + V++ +C P+ +H
Sbjct: 421 GLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGIVSLPPSYQICFIPVHHH 475
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 208/475 (43%), Gaps = 37/475 (7%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LP IGN QL ++ L +S++YGP+ + LG +++ + KE +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R L Y + FS+ G+ KQLR+ ++ L KR +
Sbjct: 72 QAEEFSGRGEQATFDWLFKGY-GVAFSN-GERAKQLRRFSIATLRGFGVGKR--GIEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR-SRDQEAFVAVIEETTKVI 215
+ E LI+ + G+ I+ T + + + S FG+R + + F++++ ++
Sbjct: 128 QEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLR---MML 184
Query: 216 SGFNIADVET--LHQEGVRIVENIINEHKKRKATLK------------NCKTGDD---ED 258
F T L++ +++++ ++ L+ N +T D D
Sbjct: 185 GSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRD 244
Query: 259 LVDVLLKIQGHGDLDSFLTTDHIKAVIS---DIFAAGSETSATTVDWAMCEMMKNPRVMK 315
+D L I+ + + T ++K ++ ++F AG+ET +TT+ + +MK+P V
Sbjct: 245 FIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEA 303
Query: 316 KAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDI 375
K E+ V + + +M + + V+ E R P+ + + + F +
Sbjct: 304 KVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFL 363
Query: 376 PVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSF 435
P V ++ RDP +++ P F P+ FLD +K ++ ++PF G+R C G
Sbjct: 364 PKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD-AFVPFSIGKRYCFGE-- 420
Query: 436 GLASVELPL--AMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLCMTPIPYH 488
GLA +EL L ++ +F +K P K D+ T+ R + P +H
Sbjct: 421 GLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPKHVGFATIPRNYTMSFLPRHHH 475
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 211/470 (44%), Gaps = 29/470 (6%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LP IGN QL ++ L +S++YGP+ + LG +++ + +E +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y ++FS+ G+ KQLR+ ++ L KR +
Sbjct: 72 QAEEFSGRGEQATFDWVFKGY-GVVFSN-GERAKQLRRFSIATLRDFGVGKR--GIEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQE----------AF 204
+ E LI+ + G+ I+ T + + + S FG+R +D+E +F
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSF 187
Query: 205 VAVIEETTKVISGFN--IADVETLHQEGVRIVENIINE-HKKRKATLKNCKTGDDEDLVD 261
T ++ F+ + + Q+ ++++ + + KK + + D +D
Sbjct: 188 QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFID 247
Query: 262 VLLKIQGHGDLDSFLTTDHIKAVIS---DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQ 318
L I+ + + T ++K ++ ++F AG+ET +TT+ + +MK+P V K
Sbjct: 248 SFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVH 306
Query: 319 AEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVK 378
E+ V + + +M +++ V+ E R P+ + R + + F +P
Sbjct: 307 EEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKG 366
Query: 379 ARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLA 438
V ++ RDP +++ P+ F P+ FL+ +K ++ ++PF G+R C G GLA
Sbjct: 367 TEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--GLA 423
Query: 439 SVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLCMTPIPYH 488
+EL L +++L + +D+D++ ++ M+ +P H
Sbjct: 424 RMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPRH 473
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 212/472 (44%), Gaps = 33/472 (6%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LP IGN QL ++ L +S++YGP+ + LG +++ + +E +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y ++FS+ G+ KQLR+ ++ L KR +
Sbjct: 72 QAEEFSGRGEQATFDWVFKGY-GVVFSN-GERAKQLRRFSIATLRDFGVGKR--GIEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQEAFVAVIEETTKV 214
+ E LI+ + G+ I+ T + + + S FG+R +D+E F++++ +
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE-FLSLLRMMLGI 186
Query: 215 ISGFNIADVETLHQEGVRIVENIINEHKKRKATLK------------NCKTGDD---EDL 259
F L++ +++++ ++ L+ N +T D D
Sbjct: 187 FQ-FTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDF 245
Query: 260 VDVLLKIQGHGDLDSFLTTDHIKAVIS---DIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
+D L I+ + + T ++K ++ ++F G+ET +TT+ + +MK+P V K
Sbjct: 246 IDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
E+ V + + +M +++ V+ E R P+ + R + + F +P
Sbjct: 305 VHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLP 364
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
V ++ RDP +++ P+ F P+ FL+ +K ++ ++PF G+R C G G
Sbjct: 365 KGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--G 421
Query: 437 LASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLCMTPIPYH 488
LA +EL L +++L + +D+D++ ++ M+ +P H
Sbjct: 422 LARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPRH 473
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 211/472 (44%), Gaps = 33/472 (6%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LP IGN QL ++ L +S++YGP+ + LG +++ + +E +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y ++FS+ G+ KQLR+ ++ L KR +
Sbjct: 72 QAEEFSGRGEQATFDWVFKGY-GVVFSN-GERAKQLRRFSIATLRDFGVGKR--GIEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQEAFVAVIEETTKV 214
+ E LI+ + G+ I+ T + + + S FG+R +D+E F++++ +
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE-FLSLLRMMLGI 186
Query: 215 ISGFNIADVETLHQEGVRIVENIINEHKKRKATLK------------NCKTGDD---EDL 259
F L++ +++++ ++ L+ N +T D D
Sbjct: 187 FQ-FTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDF 245
Query: 260 VDVLLKIQGHGDLDSFLTTDHIKAVIS---DIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
+D L I+ + + T ++K ++ +F G+ET +TT+ + +MK+P V K
Sbjct: 246 IDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
E+ V + + +M +++ V+ E R P+ + R + + F +P
Sbjct: 305 VHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLP 364
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
V ++ RDP +++ P+ F P+ FL+ +K ++ ++PF G+R C G G
Sbjct: 365 KGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--G 421
Query: 437 LASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLCMTPIPYH 488
LA +EL L +++L + +D+D++ ++ M+ +P H
Sbjct: 422 LARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPRH 473
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 211/472 (44%), Gaps = 33/472 (6%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LP IGN QL ++ L +S++YGP+ + LG +++ + +E +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y ++FS+ G+ KQLR+ ++ L KR +
Sbjct: 72 QAEEFSGRGEQATFDWVFKGY-GVVFSN-GERAKQLRRFSIATLRDFGVGKR--GIEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQEAFVAVIEETTKV 214
+ E LI+ + G+ I+ T + + + S FG+R +D+E F++++ +
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE-FLSLLRMMLGI 186
Query: 215 ISGFNIADVETLHQEGVRIVENIINEHKKRKATLK------------NCKTGDD---EDL 259
F L++ +++++ ++ L+ N +T D D
Sbjct: 187 FQ-FTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDF 245
Query: 260 VDVLLKIQGHGDLDSFLTTDHIKAVIS---DIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
+D L I+ + + T ++K ++ +F G+ET +TT+ + +MK+P V K
Sbjct: 246 IDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
E+ V + + +M +++ V+ E R P+ + R + + F +P
Sbjct: 305 VHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLP 364
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
V ++ RDP +++ P+ F P+ FL+ +K ++ ++PF G+R C G G
Sbjct: 365 KGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--G 421
Query: 437 LASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLCMTPIPYH 488
LA +EL L +++L + +D+D++ ++ M+ +P H
Sbjct: 422 LARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPRH 473
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 211/472 (44%), Gaps = 33/472 (6%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT 99
PPGP LP IGN QL ++ L +S++YGP+ + LG +++ + +E +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLS---AKRVQSFQSIR 156
F+ R + Y ++FS+ G+ KQLR+ ++ L KR +
Sbjct: 72 QAEEFSGRGEQATFDWVFKGY-GVVFSN-GERAKQLRRFSIATLRDFGVGKR--GIEERI 127
Query: 157 EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR--SRDQEAFVAVIEETTKV 214
+ E LI+ + G+ I+ T + + + S FG+R +D+E F++++ +
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE-FLSLLRMMLGI 186
Query: 215 ISGFNIADVETLHQEGVRIVENIINEHKKRKATLK------------NCKTGDD---EDL 259
F L++ +++++ ++ L+ N +T D D
Sbjct: 187 FQ-FTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDF 245
Query: 260 VDVLLKIQGHGDLDSFLTTDHIKAVIS---DIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
+D L I+ + + T ++K ++ +F G+ET +TT+ + +MK+P V K
Sbjct: 246 IDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
E+ V + + +M +++ V+ E R P+ + R + + F +P
Sbjct: 305 VHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLP 364
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
V ++ RDP +++ P+ F P+ FL+ +K ++ ++PF G+R C G G
Sbjct: 365 KGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--G 421
Query: 437 LASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLCMTPIPYH 488
LA +EL L +++L + +D+D++ ++ M+ +P H
Sbjct: 422 LARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPRH 473
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 192/427 (44%), Gaps = 39/427 (9%)
Query: 67 LSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDIIFS 126
+KYG + + LG P +++ E +E + F+ R Y +IF+
Sbjct: 39 FREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGY-GVIFA 97
Query: 127 SYGDSWKQLRKICVSEL----LSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVH 182
+ G+ WK LR+ V+ + + + V+ + I+E E LI + G++++ T
Sbjct: 98 N-GNRWKVLRRFSVTTMRDFGMGKRSVE--ERIQE-EAQCLIEELRKSKGALMDPTFLFQ 153
Query: 183 SLMYGITSRAAFGNR--SRDQE--AFVAVIEETTKVISG-----FNIADVETLHQEGV-- 231
S+ I FG R +DQE + + +T +IS F + H G
Sbjct: 154 SITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHR 213
Query: 232 RIVENI--INEH-----KKRKATLKNCKTGDDEDLVDV-LLKIQGH-GDLDSFLTTDHIK 282
++ +N+ IN + +K + TL DL+D LL ++ + S + ++
Sbjct: 214 QVYKNLQEINAYIGHSVEKHRETLDPSAP---RDLIDTYLLHMEKEKSNAHSEFSHQNLN 270
Query: 283 AVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVF--HRTGKVNETSIDEMK 340
+F AG+ET++TT+ + M+K P V ++ E+ +V HR ++++ + +M
Sbjct: 271 LNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRA--KMP 328
Query: 341 FLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPES 400
+ + V+ E R P+ +P Q G+ IP V + DP Y+ +P++
Sbjct: 329 YTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDA 388
Query: 401 FIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIK 460
F P+ FLD + K T +IPF G+RIC G A + L +L +F P +
Sbjct: 389 FNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP--VA 445
Query: 461 HEDLDMT 467
ED+D+T
Sbjct: 446 PEDIDLT 452
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 188/437 (43%), Gaps = 57/437 (13%)
Query: 54 QLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVM------------KTHD 101
++ G + D +KKYGP++ + + ++IV+SPE K+ + +
Sbjct: 6 EVGGRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQ 65
Query: 102 VVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQSFQSIREAEVS 161
VF R F + NY + W + R++ + V ++ E +
Sbjct: 66 TVFGER-LFGQGLVSECNY---------ERWHKQRRVIDLAFSRSSLVSLMETFNE-KAE 114
Query: 162 DLINWISSKAG--SVINLTQNVHSLMYGITSRAAFGNR-----------SRDQEAFVAVI 208
L+ + +KA + +++ + I ++AAFG S+ + + I
Sbjct: 115 QLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGI 174
Query: 209 EETTKVISGFNIADVETLHQ--EGVRIVENIINEH-KKRKATLKNCKTGDDEDLVDVLLK 265
+ ++ F + L + E +R + + + ++R+ LK + + L +L
Sbjct: 175 TASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKA 234
Query: 266 IQGHGD----LDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEV 321
+G D LD+F+T F AG ETSA + + + E+ + P ++ + QAEV
Sbjct: 235 EEGAQDDEGLLDNFVT----------FFIAGHETSANHLAFTVMELSRQPEIVARLQAEV 284
Query: 322 REVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARV 381
EV ++ + +++L V+KE+LRL+P A R + I+G +P +
Sbjct: 285 DEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTF-RLLEEETLIDGVRVPGNTPL 343
Query: 382 IVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVE 441
+ + + +GR Y+ +P +F P+RF F Y PF G R C G F V+
Sbjct: 344 LFSTYVMGRMDTYFEDPLTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVK 400
Query: 442 LPLAMLLYHFDWKLPNG 458
+ +A LL +++L G
Sbjct: 401 VVMAKLLQRLEFRLVPG 417
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 173/426 (40%), Gaps = 68/426 (15%)
Query: 69 KKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDI-IFSS 127
+KYGP+ +LG V ++ V PE + K+ P Y R I +
Sbjct: 40 QKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLK 99
Query: 128 YGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYG 187
+WK+ R E+++ + ++F + +A D + S+++
Sbjct: 100 KSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFV------------------SVLHR 141
Query: 188 ITSRAAFGNRSRD--QEAFVAVIEETTKVISGFNIADVE-TLHQEGVRIVENIINEHKK- 243
+A GN S D + F E T VI G +E ++ E R ++ I
Sbjct: 142 RIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTS 201
Query: 244 --------------RKATLKNCKTGDD------------------------EDLVDVLLK 265
R T K+ D D +L +
Sbjct: 202 VPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYR 261
Query: 266 IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVF 325
+ G DS ++ + IKA ++++ A G +T++ T+ W + EM +N +V +AEV
Sbjct: 262 LLG----DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAAR 317
Query: 326 HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNA 385
H+ T + + LK +KETLRLHP + + + R + + IP K V V
Sbjct: 318 HQAQGDMATMLQLVPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAI 376
Query: 386 WAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLA 445
+A+GR+P ++ +PE+F P R+L S D T F + FG G R C G + + L
Sbjct: 377 YALGREPTFFFDPENFDPTRWL--SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLI 434
Query: 446 MLLYHF 451
+L +F
Sbjct: 435 NMLENF 440
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 173/426 (40%), Gaps = 68/426 (15%)
Query: 69 KKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDI-IFSS 127
+KYGP+ +LG V ++ V PE + K+ P Y R I +
Sbjct: 43 QKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLK 102
Query: 128 YGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYG 187
+WK+ R E+++ + ++F + +A D + S+++
Sbjct: 103 KSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFV------------------SVLHR 144
Query: 188 ITSRAAFGNRSRD--QEAFVAVIEETTKVISGFNIADVE-TLHQEGVRIVENIINEHKK- 243
+A GN S D + F E T VI G +E ++ E R ++ I
Sbjct: 145 RIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTS 204
Query: 244 --------------RKATLKNCKTGDD------------------------EDLVDVLLK 265
R T K+ D D +L +
Sbjct: 205 VPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYR 264
Query: 266 IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVF 325
+ G DS ++ + IKA ++++ A G +T++ T+ W + EM +N +V +AEV
Sbjct: 265 LLG----DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAAR 320
Query: 326 HRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNA 385
H+ T + + LK +KETLRLHP + + + R + + IP K V V
Sbjct: 321 HQAQGDMATMLQLVPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAI 379
Query: 386 WAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLA 445
+A+GR+P ++ +PE+F P R+L S D T F + FG G R C G + + L
Sbjct: 380 YALGREPTFFFDPENFDPTRWL--SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLI 437
Query: 446 MLLYHF 451
+L +F
Sbjct: 438 NMLENF 443
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 187/445 (42%), Gaps = 52/445 (11%)
Query: 41 PGPWKLPVIGNLYQL--AGSLP--HHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEV 96
PGP P++G+L ++ G L H L + KKYG + ++LG ++ + SP + + +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 97 MKTHDVVFASRPHFPAAQILSYN-YRDIIFSSYG------DSWKQLRKICVSELLSAKRV 149
+T H +I + YRD +YG W+++R +L+ +
Sbjct: 87 YRTESA------HPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEI 140
Query: 150 QSF-QSIRE--AEVSDLINWISSKAGSVINLTQNVHSLMYG----ITSRAAFGNRSRDQE 202
+ I E A+ + ++ + + G + +L ++ + + FG ++ E
Sbjct: 141 MKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETE 200
Query: 203 ----AFVAVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATL-KNCKTGDDE 257
F+ I+ + VE LH+ R+ + H T+ K+ K D
Sbjct: 201 EEALTFITAIKTMMSTFGKMMVTPVE-LHK---RLNTKVWQAHTLAWDTIFKSVKPCIDN 256
Query: 258 DL--------VDVLLKI--QGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEM 307
L D L I Q H L+ + A ++++ A ET+A ++ W + +
Sbjct: 257 RLQRYSQQPGADFLCDIYQQDH------LSKKELYAAVTELQLAAVETTANSLMWILYNL 310
Query: 308 MKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQR 367
+NP+ ++ EV+ V + M +LK +KE++RL P+ P R +
Sbjct: 311 SRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT-RTLDKP 369
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
+ + +P + +N +G + + + F PER+L + K F ++PFG G+
Sbjct: 370 TVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQK--EKKINPFAHLPFGIGK 427
Query: 428 RICPGMSFGLASVELPLAMLLYHFD 452
R+C G + L L ++ +D
Sbjct: 428 RMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 179/417 (42%), Gaps = 57/417 (13%)
Query: 69 KKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRD---IIF 125
+KYGP+ +LG + ++ + PE + K + + R P Y+ ++F
Sbjct: 45 QKYGPIYREKLGNLESVYIIHPEDVAHLFK-FEGSYPERYDIPPWLAYHRYYQKPIGVLF 103
Query: 126 SSYGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSK---AGS---VINLTQ 179
G +WK+ R + +E+++ + +++F + D ++ + + GS V ++ +
Sbjct: 104 KKSG-TWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKE 162
Query: 180 NVHSLMYGITSRAAFGNR--------SRDQEAFV-AVIEETTKVISGFNI---------- 220
++ + + FG R + + + F+ AV + + N+
Sbjct: 163 DLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRT 222
Query: 221 -------ADVETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLD 273
A +T+ + + E I + +RK +N ++ LLK +
Sbjct: 223 KTWRDHVAAWDTIFNKAEKYTE-IFYQDLRRKTEFRNYP-----GILYCLLKSEK----- 271
Query: 274 SFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNE 333
+ + +KA I+++ A G T++ T+ W + EM ++ V + + EV +
Sbjct: 272 --MLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDIS 329
Query: 334 TSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPE 393
+ + LK +KETLRLHP + + + R + + IP K V V +A+GRDP
Sbjct: 330 KMLQMVPLLKASIKETLRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPA 388
Query: 394 YWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYH 450
+++ P+ F P R+L S D +F + FG G R C G EL + + L H
Sbjct: 389 FFSSPDKFDPTRWL--SKDKDLIHFRNLGFGWGVRQCVGRRIA----ELEMTLFLIH 439
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 160/359 (44%), Gaps = 28/359 (7%)
Query: 114 QILSYNYRDIIFSS---YGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLI-NWISS 169
Q +Y + IF + S ++ +++ + L ++++ + E +V +I +W
Sbjct: 72 QAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADW--G 129
Query: 170 KAGSVINLTQNVHSLMYGITSRAAFGNRSRDQ--EAFVAVIEETTKVISGFNIAD----V 223
+AG I+L L +S G + RDQ F + E + D +
Sbjct: 130 EAGE-IDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPI 188
Query: 224 ETLHQEG------VRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLT 277
E+ + V +V +I+N T K+ D D++DVL+ ++ F +
Sbjct: 189 ESFRRRDEARNGLVALVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGTPRF-S 242
Query: 278 TDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSID 337
D I + + AG TS+ T W + E+M++ E+ E++ V+ ++
Sbjct: 243 ADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALR 302
Query: 338 EMKFLKLVVKETLRLHPAAPLLI-PRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
++ L+ V+KETLRLHP PL+I R ++ G I V + R PE +
Sbjct: 303 QIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFP 360
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
+P F+P R+ + + +IPFGAGR C G +F + ++ ++LL +++++
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 160/359 (44%), Gaps = 28/359 (7%)
Query: 114 QILSYNYRDIIFSS---YGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLI-NWISS 169
Q +Y + IF + S ++ +++ + L ++++ + E +V +I +W
Sbjct: 72 QAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADW--G 129
Query: 170 KAGSVINLTQNVHSLMYGITSRAAFGNRSRDQ--EAFVAVIEETTKVISGFNIAD----V 223
+AG I+L L +S G + RDQ F + E + D +
Sbjct: 130 EAGE-IDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPI 188
Query: 224 ETLHQEG------VRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLT 277
E+ + V +V +I+N T K+ D D++DVL+ ++ F +
Sbjct: 189 ESFRRRDEARNGLVALVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGTPRF-S 242
Query: 278 TDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSID 337
D I + + AG TS+ T W + E+M++ E+ E++ V+ ++
Sbjct: 243 ADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALR 302
Query: 338 EMKFLKLVVKETLRLHPAAPLLI-PRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
++ L+ V+KETLRLHP PL+I R ++ G I V + R PE +
Sbjct: 303 QIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFP 360
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
+P F+P R+ + + +IPFGAGR C G +F + ++ ++LL +++++
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 160/359 (44%), Gaps = 28/359 (7%)
Query: 114 QILSYNYRDIIFSS---YGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLI-NWISS 169
Q +Y + IF + S ++ +++ + L ++++ + E +V +I +W
Sbjct: 72 QAKAYPFMTPIFGEAVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADW--G 129
Query: 170 KAGSVINLTQNVHSLMYGITSRAAFGNRSRDQ--EAFVAVIEETTKVISGFNIAD----V 223
+AG I+L L +S G + RDQ F + E + D +
Sbjct: 130 EAGE-IDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPI 188
Query: 224 ETLHQEG------VRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLT 277
E+ + V +V +I+N T K+ D D++DVL+ ++ F +
Sbjct: 189 ESFRRRDEARNGLVALVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGTPRF-S 242
Query: 278 TDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSID 337
D I + + AG TS+ T W + E+M++ E+ E++ V+ ++
Sbjct: 243 ADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALR 302
Query: 338 EMKFLKLVVKETLRLHPAAPLLI-PRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
++ L+ V+KETLRLHP PL+I R ++ G I V + R PE +
Sbjct: 303 QIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFP 360
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
+P F+P R+ + + +IPFGAGR C G +F + ++ ++LL +++++
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 231 VRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFA 290
V +V +I+N T K+ D D++DVL+ ++ F + D I + +
Sbjct: 202 VALVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGTPRF-SADEITGMFISMMF 255
Query: 291 AGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETL 350
AG TS+ T W + E+M++ E+ E++ V+ ++ ++ L+ V+KETL
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 351 RLHPAAPLLI-PRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDH 409
RLHP PL+I R ++ G I V + R PE + +P F+P R+
Sbjct: 316 RLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQP 373
Query: 410 SVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
+ + +IPFGAGR C G +F + ++ ++LL +++++
Sbjct: 374 RQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/473 (20%), Positives = 204/473 (43%), Gaps = 61/473 (12%)
Query: 27 EKRSQTNNRISNPPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTII 86
+K S + PP +P +G Q G+ P LR +K+G + +L
Sbjct: 3 KKTSSRRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHF 61
Query: 87 VSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSA 146
+++P +V+ H F + A ++ +R I G++ + + + L
Sbjct: 62 ITNPLSYHKVL-CHGKYFDWKKFHFATSAKAFGHRSID-PMDGNTTENINDTFIKTL--- 116
Query: 147 KRVQSFQSIREAEVSDLINW----ISSKAGSVINLTQNVHSLMYGITSRAA----FG--- 195
+ + S+ E+ + +L +SS + + +T+ ++S Y + A FG
Sbjct: 117 -QGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDL 175
Query: 196 NRSRDQEAFVAVIEETTK--------VISGFNIADVETLHQEGVRIVENIINEHKKRKAT 247
R Q+A + + K +++G I T H ++ E++ +E+ +++ +
Sbjct: 176 TRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRES 235
Query: 248 LKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEM 307
+ + L++ + L +F + K + ++A+ + T T W++ +M
Sbjct: 236 ISEL----------ISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQM 284
Query: 308 MKNPRVMKKAQAEVREVFHRTGK----------VNETSIDEMKFLKLVVKETLRLHPAAP 357
++NP MK A EV+ G+ +++ ++++ L ++KE+LRL A+
Sbjct: 285 IRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS- 343
Query: 358 LLIPRECGQRCQIN----GFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDY 413
L R + ++ ++I + + + DPE + +P +F +R+LD +
Sbjct: 344 -LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKT 402
Query: 414 KGT--------NFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNG 458
K T + Y+PFG+G ICPG F + ++ L ++L +F+ +L G
Sbjct: 403 KTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/473 (20%), Positives = 204/473 (43%), Gaps = 61/473 (12%)
Query: 27 EKRSQTNNRISNPPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTII 86
+K S + PP +P +G Q G+ P LR +K+G + +L
Sbjct: 3 KKTSSRRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHF 61
Query: 87 VSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSA 146
+++P +V+ H F + A ++ +R I G++ + + + L
Sbjct: 62 ITNPLSYHKVL-CHGKYFDWKKFHFALSAKAFGHRSID-PMDGNTTENINDTFIKTL--- 116
Query: 147 KRVQSFQSIREAEVSDLINW----ISSKAGSVINLTQNVHSLMYGITSRAA----FG--- 195
+ + S+ E+ + +L +SS + + +T+ ++S Y + A FG
Sbjct: 117 -QGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDL 175
Query: 196 NRSRDQEAFVAVIEETTK--------VISGFNIADVETLHQEGVRIVENIINEHKKRKAT 247
R Q+A + + K +++G I T H ++ E++ +E+ +++ +
Sbjct: 176 TRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRES 235
Query: 248 LKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEM 307
+ + L++ + L +F + K + ++A+ + T T W++ +M
Sbjct: 236 ISEL----------ISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQM 284
Query: 308 MKNPRVMKKAQAEVREVFHRTGK----------VNETSIDEMKFLKLVVKETLRLHPAAP 357
++NP MK A EV+ G+ +++ ++++ L ++KE+LRL A+
Sbjct: 285 IRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS- 343
Query: 358 LLIPRECGQRCQIN----GFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDY 413
L R + ++ ++I + + + DPE + +P +F +R+LD +
Sbjct: 344 -LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKT 402
Query: 414 KGT--------NFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNG 458
K T + Y+PFG+G ICPG F + ++ L ++L +F+ +L G
Sbjct: 403 KTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 184/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 65
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 66 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 118
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 119 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 178
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 179 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 232
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 233 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 291
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 292 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 348
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R CPG
Sbjct: 349 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACPGQQ 405
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 406 FALHEATLVLGMMLKHFDFE 425
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 160/424 (37%), Gaps = 23/424 (5%)
Query: 40 PPGPWKLPVIGNLYQLAGSLPHHGLRDLSKK----YGPLMLLQLGEVPTIIVSSPEVAKE 95
PPG + LP +G D KK +GP+ +L I +S +
Sbjct: 14 PPGDFGLPWLGETLNFLND------GDFGKKRQQQFGPIFKTRLFGKNVIFISGALANRF 67
Query: 96 VMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQSFQSI 155
+ F + +L N + + G+ + RKI L + + S+
Sbjct: 68 LFTKEQETFQATWPLSTRILLGPN---ALATQMGEIHRSRRKILYQAFL-PRTLDSYLPK 123
Query: 156 REAEVSDLI-NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQEAFVAVIEETTKV 214
+ V + W KA VI Q + + + + + G + E +
Sbjct: 124 MDGIVQGYLEQW--GKANEVIWYPQ-LRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQG 180
Query: 215 ISGFNIADVETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDS 274
+ I TL + R ++ E +K + + +ED + +LL D +
Sbjct: 181 LFSLPIPLPNTLFGKSQRARALLLAELEK-IIKARQQQPPSEEDALGILLA--ARDDNNQ 237
Query: 275 FLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNET 334
L+ +K I + AG ET + + + C ++ +++ + + + ++
Sbjct: 238 PLSLPELKDQILLLLFAGHETLTSALS-SFCLLLGQHSDIRERVRQEQNKLQLSQELTAE 296
Query: 335 SIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEY 394
++ +M +L V++E LRL P RE Q CQ GF P V DP+
Sbjct: 297 TLKKMPYLDQVLQEVLRLIPPVGGGF-RELIQDCQFQGFHFPKGWLVSYQISQTHADPDL 355
Query: 395 WTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWK 454
+ +PE F PERF F ++PFG G R C G F ++L L+ FDW
Sbjct: 356 YPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWT 415
Query: 455 LPNG 458
L G
Sbjct: 416 LLPG 419
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 276 LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETS 335
LT D + ++ + AG TS+TT W + ++ + KK E + V + +
Sbjct: 248 LTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN--LPPLT 305
Query: 336 IDEMKFLKLV---VKETLRLHPAAPLLIPRECGQRCQ-INGFDIPVKARVIVNAWAIGRD 391
D++K L L+ +KETLRL P P++I + Q + G+ IP +V V+ R
Sbjct: 306 YDQLKDLNLLDRCIKETLRLRP--PIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRL 363
Query: 392 PEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHF 451
+ W E F P+R+L + G F Y+PFGAGR C G +F ++ + +L +
Sbjct: 364 KDSWVERLDFNPDRYLQDN-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLY 422
Query: 452 DWKLPNG 458
++ L +G
Sbjct: 423 EFDLIDG 429
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 187/449 (41%), Gaps = 55/449 (12%)
Query: 34 NRISNPPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLG--EVPTIIVSSPE 91
R ++PP P +P++G++ Q S PL +Q ++ + I +
Sbjct: 13 TRPTDPPVYPVTVPILGHIIQFGKS--------------PLGFMQECKRQLKSGIFTINI 58
Query: 92 VAKEVMKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSE 142
V K V D SR P ++LS Y++ +F +Y + ++R+ ++E
Sbjct: 59 VGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAE 118
Query: 143 LLSAKRVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSR- 199
L+ + Q+F + EV + NW K INL ++ +++ + FG R
Sbjct: 119 ELTIAKFQNFVPAIQHEVRKFMAANW--DKDEGEINLLEDCSTMIINTACQCLFGEDLRK 176
Query: 200 --DQEAF---VAVIEETTKVISGFNIADVETLHQEGVRIVENIINEHK-------KRKAT 247
D F +A +E + + F ++ + R E K RKA
Sbjct: 177 RLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKAA 236
Query: 248 LKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEM 307
N + + L +L + G + ++ + +I AG TS+ T W+M +
Sbjct: 237 AVNKDSSTSDLLSGLLSAVYRDG---TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL 293
Query: 308 MKNPRVMKKAQAEVREVFHRTGKVNETSI-DEMKFLKLVVKETLRLHPAAPLLIPRECGQ 366
M +P +K +A +E+ ++N ++ DEM F + +E++R P L++ R+
Sbjct: 294 M-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMA 351
Query: 367 RCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAG 426
++ + +P + + D E + EP + PER D V+ +I FGAG
Sbjct: 352 DVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----FIGFGAG 404
Query: 427 RRICPGMSFGLASVELPLAMLLYHFDWKL 455
C G FGL V+ LA +D++L
Sbjct: 405 VHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 184/439 (41%), Gaps = 45/439 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSY---NYRDIIFSSYG--DSWKQLRKICVSELLSAKRVQSFQSI 155
SR +Q L + + D +F+S+ +WK+ I + S + ++ + ++
Sbjct: 65 -----SRFDKNLSQALKFVRDFFGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHAM 118
Query: 156 R-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAFV 205
+ V + W A I + +++ L F R RDQ + V
Sbjct: 119 MVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMV 178
Query: 206 AVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLV 260
++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 179 RALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD-- 231
Query: 261 DVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQ 318
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 319 AEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVK 378
E V + + ++K++ +V+ E LRL P AP + + G + P++
Sbjct: 292 EEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLE 348
Query: 379 A--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSF 435
++V + RD W + E F PERF + S + + PFG G+R C G F
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQF 405
Query: 436 GLASVELPLAMLLYHFDWK 454
L L L M+L HFD++
Sbjct: 406 ALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 177/439 (40%), Gaps = 45/439 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEAADE- 65
Query: 101 DVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSE--LLSAKRVQSFQSIREA 158
SR +Q L + RD SW + C + LL + Q+ +
Sbjct: 66 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAM 119
Query: 159 EVSDLIN----WISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAFV 205
V + W A I + +++ L + F R RDQ + V
Sbjct: 120 MVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPHPFITSMV 179
Query: 206 AVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLV 260
++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 180 RALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD-- 232
Query: 261 DVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQ 318
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 319 AEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVK 378
E V + + ++K++ +V+ E LRL P AP + + G + P++
Sbjct: 293 EEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLE 349
Query: 379 A--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSF 435
++V + RD W + E F PERF + S + + PFG G+R C G F
Sbjct: 350 KGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQF 406
Query: 436 GLASVELPLAMLLYHFDWK 454
L L L M+L HFD++
Sbjct: 407 ALHEATLVLGMMLKHFDFE 425
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 184/453 (40%), Gaps = 63/453 (13%)
Query: 34 NRISNPPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLG--EVPTIIVSSPE 91
R ++PP P +P++G++ Q S PL +Q ++ + I +
Sbjct: 13 TRPTDPPVYPVTVPILGHIIQFGKS--------------PLGFMQECKRQLKSGIFTINI 58
Query: 92 VAKEVMKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSE 142
V K V D SR P ++LS Y++ +F +Y + ++R+ ++E
Sbjct: 59 VGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAE 118
Query: 143 LLSAKRVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSR- 199
L+ + Q+F + EV + NW K INL ++ +++ + FG R
Sbjct: 119 ELTIAKFQNFVPAIQHEVRKFMAANW--DKDEGEINLLEDCSTMIINTACQCLFGEDLRK 176
Query: 200 --DQEAFV-------------AVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKR 244
D F AV + A E +I+ II K+
Sbjct: 177 RLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEE 236
Query: 245 KATLKNCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWA 303
+ K DL+ LL + G + ++ + +I AG TS+ T W+
Sbjct: 237 EVN----KDSSTSDLLSGLLSAVYRDG---TPMSLHEVCGMIVAAMFAGQHTSSITTTWS 289
Query: 304 MCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI-DEMKFLKLVVKETLRLHPAAPLLIPR 362
M +M +P +K +A +E+ ++N ++ DEM F + +E++R P L++ R
Sbjct: 290 MLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPL-LMLMR 347
Query: 363 ECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIP 422
+ ++ + +P + + D E + EP + PER D V+ +I
Sbjct: 348 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----FIG 400
Query: 423 FGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
FGAG C G FGL V+ LA +D++L
Sbjct: 401 FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 272 LDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKV 331
L + L+ + IKA ++ A +T+A + + E+ +NP V + + E +
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEH 328
Query: 332 NETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRD 391
+ + E+ L+ +KETLRL+P L + R + + IP V V +++GR+
Sbjct: 329 PQKATTELPLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRN 387
Query: 392 PEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPG 432
+ PE + P+R+LD + G NF ++PFG G R C G
Sbjct: 388 AALFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 184/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACEGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 184/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 186/441 (42%), Gaps = 49/441 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 67
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 68 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 120
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 121 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 180
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEH-KKRKATLKNCKTGDDED 258
V ++E + N D + QE ++++ +++++ RKA+ G+ D
Sbjct: 181 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS------GEQSD 234
Query: 259 LVDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++K
Sbjct: 235 --DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK 292
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
A E V + + ++K++ +V+ E LRL P AP + + G + P
Sbjct: 293 AAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYP 349
Query: 377 VKA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
++ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 350 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQ 406
Query: 434 SFGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 407 QFALHEATLVLGMMLKHFDFE 427
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
Query: 228 QEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSF--LTTDHIKAVI 285
QE ++++ ++++ K +G+ D D+L + D ++ L ++I+ I
Sbjct: 206 QEDIKVMNDLVD-----KIIADRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQI 258
Query: 286 SDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLV 345
AG ET++ + +A+ ++KNP V++KA E V + + ++K++ +V
Sbjct: 259 ITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMV 317
Query: 346 VKETLRLHPAAPLLIPRECGQRCQINGFDIPVKA--RVIVNAWAIGRDPEYWTEP-ESFI 402
+ E LRL P AP + + G + P++ ++V + RD W + E F
Sbjct: 318 LNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 403 PERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWK 454
PERF + S + PFG G+R C G F L L L M+L HFD++
Sbjct: 376 PERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 65
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 66 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 118
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 119 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 178
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 179 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 232
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 233 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 291
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 292 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 348
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 349 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 405
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 406 FALHEATLVLGMMLKHFDFE 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGKQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 184/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 65
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 66 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 118
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 119 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 178
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 179 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 232
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 233 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 291
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 292 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPF--SLYAKEDTVLGGEYPL 348
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 349 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQ 405
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 406 FALHEATLVLGMMLKHFDFE 425
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 276 LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETS 335
L ++I+ I AG ET++ + +A+ ++KNP V++KA E V +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQ 307
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKA--RVIVNAWAIGRDPE 393
+ ++K++ +V+ E LRL P AP + + G + P++ ++V + RD
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 394 YWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFD 452
W + E F PERF + S + PFG G+R C G F L L L M+L HFD
Sbjct: 366 IWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 453 WK 454
++
Sbjct: 423 FE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 186/442 (42%), Gaps = 51/442 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 12 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD-- 69
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 70 ----ESRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 123
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 124 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 183
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEH-KKRKATLKNCKTGDDED 258
V ++E + N D + QE ++++ +++++ RKA+ + +D
Sbjct: 184 VRALDEAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQS-----DD 238
Query: 259 LVDVLLKIQGHG---DLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
L+ +L HG + L ++I+ I AG ET++ + + + ++KNP V++
Sbjct: 239 LLTHML----HGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQ 294
Query: 316 KAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDI 375
KA E V + + ++K++ +V+ E LRL P AP + + G +
Sbjct: 295 KAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEY 351
Query: 376 PVKA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPG 432
P++ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 352 PLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIG 408
Query: 433 MSFGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 409 QQFALHEATLVLGMMLKHFDFE 430
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 38/350 (10%)
Query: 127 SYGDSWKQLRKICVSELLSAKRVQSFQSIR-EAEVSDLINWISSKAGSVINLTQNVHSLM 185
++ +WK+ R I + L S + ++ + ++ + V + W + I + +++ L
Sbjct: 92 THEKNWKKARNILLPRL-SQQAMKGYHAMMVDIAVQLVQKWERLNSDEHIEVPEDMTRLT 150
Query: 186 YGITSRAAFGNR----SRDQ-----EAFVAVIEETTKVISGFNIADV-----ETLHQEGV 231
F R RDQ + V ++E + N D + QE +
Sbjct: 151 LDTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRANPDDPAYDENKRQFQEDI 210
Query: 232 RIVENIINEH-KKRKATLKNCKTGDDEDLVDVLLKIQGHG---DLDSFLTTDHIKAVISD 287
+++ +++++ RKA+ + +DL+ +L HG + L ++I+ I
Sbjct: 211 KVMNDLVDKIIADRKASGEQS-----DDLLTHML----HGKDPETGEPLDDENIRYQIIT 261
Query: 288 IFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVK 347
AG ET++ + +A+ ++KNP V++KA E V + + ++K++ +V+
Sbjct: 262 FLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLN 320
Query: 348 ETLRLHPAAPLLIPRECGQRCQINGFDIPVKA--RVIVNAWAIGRDPEYWTEP-ESFIPE 404
E LR+ P AP + + G + P++ ++V + RD W + E F PE
Sbjct: 321 EALRIWPTAPAF--SLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPE 378
Query: 405 RFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWK 454
RF + S + PFG G+R C G F L L L M+L HFD++
Sbjct: 379 RFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 228 QEGVRIVENIINEH-KKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSF--LTTDHIKAV 284
QE ++++ +++++ RKA+ G+ D D+L + D ++ L ++I+
Sbjct: 206 QEDIKVMNDLVDKIIADRKAS------GEQSD--DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 285 ISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKL 344
I AG E+++ + +A+ ++KNP V++KA E V + + ++K++ +
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGM 316
Query: 345 VVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKA--RVIVNAWAIGRDPEYWTEP-ESF 401
V+ E LRL P AP + + G + P++ ++V + RD W + E F
Sbjct: 317 VLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 402 IPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNG--- 458
PERF + S + PFG G+R C G F L L L M+L HFD++
Sbjct: 375 RPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
Query: 459 -IKHEDLDMTEAFGVTVRRKQ 478
IK L E F V + K+
Sbjct: 432 DIKETQLLKPEGFVVKAKSKK 452
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 65
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 66 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 118
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 119 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 178
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 179 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 232
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AAG E ++ + +A+ ++KNP V++KA
Sbjct: 233 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKA 291
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P P + + G + P+
Sbjct: 292 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAF--SLYAKEDTVLGGEYPL 348
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 349 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQ 405
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 406 FALHEATLVLGMMLKHFDFE 425
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + P+G G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPYGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 186/441 (42%), Gaps = 49/441 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD-- 63
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 64 ----ESRFDKNLSQALKFA-RDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQEA--FVAV 207
+ + V + W A I + +++ L F R RDQ +++
Sbjct: 118 MMVDIAVQLVQKWERLNADEYIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIISM 177
Query: 208 IEETTKVISGFNIADVET--------LHQEGVRIVENIINEH-KKRKATLKNCKTGDDED 258
I +V++ A+ + QE ++++ +++++ RKA+ G+ D
Sbjct: 178 IRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS------GEQSD 231
Query: 259 LVDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
D+L ++ D ++ L +I I AG ET++ + +A+ ++KNP V++K
Sbjct: 232 --DLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK 289
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
E V + + ++K++ +V+ E LRL P AP + + G + P
Sbjct: 290 VAEEATRVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYP 346
Query: 377 VKA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
++ V+V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 347 LEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQ 403
Query: 434 SFGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 404 QFALHEATLVLGMMLKHFDFE 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AAG E ++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P P + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 182/442 (41%), Gaps = 51/442 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 101 --DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSF 152
D + P F RD+ +F+S+ +WK+ I + S + ++ +
Sbjct: 67 RFDKNLSQAPKF---------VRDLAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGY 116
Query: 153 QSIR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----E 202
++ + V + W A I + +++ L F R RDQ
Sbjct: 117 HAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIT 176
Query: 203 AFVAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDE 257
+ V ++E + N D + QE ++++ ++++ K +G+
Sbjct: 177 SMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQS 231
Query: 258 DLVDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMK 315
D D+L + D ++ L ++I+ I AAG E ++ + +A+ ++KNP ++
Sbjct: 232 D--DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQ 289
Query: 316 KAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDI 375
KA E V ++ + ++K++ +V+ E LRL P AP + + G +
Sbjct: 290 KAAEEAARVLVDPVPSHK-QVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEY 346
Query: 376 PVKA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPG 432
P++ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 347 PLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIG 403
Query: 433 MSFGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 404 QQFALHEATLVLGMMLKHFDFE 425
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 184/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 67
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 68 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 120
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 121 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 180
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 181 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 234
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 235 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 293
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P +P + + G + P+
Sbjct: 294 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAF--SLYAKEDTVLGGEYPL 350
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 351 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQ 407
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 408 FALHEATLVLGMMLKHFDFE 427
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 185/441 (41%), Gaps = 49/441 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD-- 63
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 64 ----ESRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEH-KKRKATLKNCKTGDDED 258
V ++E + N D + QE ++++ +++++ RKA+ G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS------GEQSD 231
Query: 259 LVDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
D+L + D ++ L ++I+ I G ET++ + +A+ ++KNP V++K
Sbjct: 232 --DLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQK 289
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
A E V + + ++K++ +V+ E LRL P AP + + G + P
Sbjct: 290 AAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYP 346
Query: 377 VKA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
++ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 347 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQ 403
Query: 434 SFGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 404 QFALHEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD-- 63
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 64 ----ESRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I G ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD-- 63
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 64 ----ESRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I G ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG E ++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Query: 228 QEGVRIVENIINEH-KKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSF--LTTDHIKAV 284
QE ++++ +++++ RKA+ G+ D D+L + D ++ L ++I+
Sbjct: 207 QEDIKVMNDLVDKIIADRKAS------GEQSD--DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 285 ISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKL 344
I AG E+++ + +A+ ++KNP V++KA E V + + ++K++ +
Sbjct: 259 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGM 317
Query: 345 VVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKA--RVIVNAWAIGRDPEYWTEP-ESF 401
V+ E LRL P AP + + G + P++ ++V + RD W + E F
Sbjct: 318 VLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 402 IPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWK 454
PERF + S + PFG G+R C G F L L L M+L HFD++
Sbjct: 376 RPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD-- 63
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 64 ----ESRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I G ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG E ++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 181/448 (40%), Gaps = 63/448 (14%)
Query: 39 PPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLG--EVPTIIVSSPEVAKEV 96
PP P +P++G++ Q S PL +Q ++ + I + V K V
Sbjct: 6 PPVYPVTVPILGHIIQFGKS--------------PLGFMQECKRQLKSGIFTINIVGKRV 51
Query: 97 MKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSELLSAK 147
D SR P ++LS Y++ +F +Y + ++R+ ++E L+
Sbjct: 52 TIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIA 111
Query: 148 RVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSR---DQE 202
+ Q+F + EV + NW K INL ++ +++ + FG R D
Sbjct: 112 KFQNFVPAIQHEVRKFMAANW--DKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR 169
Query: 203 AFV-------------AVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLK 249
F AV + A E +I+ II K+ +
Sbjct: 170 RFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN-- 227
Query: 250 NCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMM 308
K DL+ LL + G + ++ + +I AG TS+ T W+M +M
Sbjct: 228 --KDSSTSDLLSGLLSAVYRDG---TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM 282
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSI-DEMKFLKLVVKETLRLHPAAPLLIPRECGQR 367
+P +K +A +E+ ++N ++ DEM F + +E++R P L++ R+
Sbjct: 283 -HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMAD 340
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
++ + +P + + D E + EP + PER D V+ +I FGAG
Sbjct: 341 VKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----FIGFGAGV 393
Query: 428 RICPGMSFGLASVELPLAMLLYHFDWKL 455
C G FGL V+ LA +D++L
Sbjct: 394 HKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG E ++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I G ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Query: 228 QEGVRIVENIINEH-KKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSF--LTTDHIKAV 284
QE ++++ +++++ RKA+ G+ D D+L + D ++ L ++I+
Sbjct: 206 QEDIKVMNDLVDKIIADRKAS------GEQSD--DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 285 ISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKL 344
I AG E+++ + +A+ ++KNP V++KA E V + + ++K++ +
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGM 316
Query: 345 VVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKA--RVIVNAWAIGRDPEYWTEP-ESF 401
V+ E LRL P AP + + G + P++ ++V + RD W + E F
Sbjct: 317 VLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 402 IPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWK 454
PERF + S + PFG G+R C G F L L L M+L HFD++
Sbjct: 375 RPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 181/448 (40%), Gaps = 63/448 (14%)
Query: 39 PPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLG--EVPTIIVSSPEVAKEV 96
PP P +P++G++ Q S PL +Q ++ + I + V K V
Sbjct: 5 PPVYPVTVPILGHIIQFGKS--------------PLGFMQECKRQLKSGIFTINIVGKRV 50
Query: 97 MKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSELLSAK 147
D SR P ++LS Y++ +F +Y + ++R+ ++E L+
Sbjct: 51 TIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIA 110
Query: 148 RVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSR---DQE 202
+ Q+F + EV + NW K INL ++ +++ + FG R D
Sbjct: 111 KFQNFVPAIQHEVRKFMAANW--DKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR 168
Query: 203 AFV-------------AVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLK 249
F AV + A E +I+ II K+ +
Sbjct: 169 RFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN-- 226
Query: 250 NCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMM 308
K DL+ LL + G + ++ + +I AG TS+ T W+M +M
Sbjct: 227 --KDSSTSDLLSGLLSAVYRDG---TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM 281
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSI-DEMKFLKLVVKETLRLHPAAPLLIPRECGQR 367
+P +K +A +E+ ++N ++ DEM F + +E++R P L++ R+
Sbjct: 282 -HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMAD 339
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
++ + +P + + D E + EP + PER D V+ +I FGAG
Sbjct: 340 VKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----FIGFGAGV 392
Query: 428 RICPGMSFGLASVELPLAMLLYHFDWKL 455
C G FGL V+ LA +D++L
Sbjct: 393 HKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 181/448 (40%), Gaps = 63/448 (14%)
Query: 39 PPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLG--EVPTIIVSSPEVAKEV 96
PP P +P++G++ Q S PL +Q ++ + I + V K V
Sbjct: 5 PPVYPVTVPILGHIIQFGKS--------------PLGFMQECKRQLKSGIFTINIVGKRV 50
Query: 97 MKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSELLSAK 147
D SR P ++LS Y++ +F +Y + ++R+ ++E L+
Sbjct: 51 TIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIA 110
Query: 148 RVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSR---DQE 202
+ Q+F + EV + NW K INL ++ +++ + FG R D
Sbjct: 111 KFQNFVPAIQHEVRKFMAANW--DKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR 168
Query: 203 AFV-------------AVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLK 249
F AV + A E +I+ II K+ +
Sbjct: 169 RFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN-- 226
Query: 250 NCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMM 308
K DL+ LL + G + ++ + +I AG TS+ T W+M +M
Sbjct: 227 --KDSSTSDLLSGLLSAVYRDG---TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM 281
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSI-DEMKFLKLVVKETLRLHPAAPLLIPRECGQR 367
+P +K +A +E+ ++N ++ DEM F + +E++R P L++ R+
Sbjct: 282 -HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMAD 339
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
++ + +P + + D E + EP + PER D V+ +I FGAG
Sbjct: 340 VKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----FIGFGAGV 392
Query: 428 RICPGMSFGLASVELPLAMLLYHFDWKL 455
C G FGL V+ LA +D++L
Sbjct: 393 HKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 181/448 (40%), Gaps = 63/448 (14%)
Query: 39 PPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLG--EVPTIIVSSPEVAKEV 96
PP P +P++G++ Q S PL +Q ++ + I + V K V
Sbjct: 4 PPVYPVTVPILGHIIQFGKS--------------PLGFMQECKRQLKSGIFTINIVGKRV 49
Query: 97 MKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSELLSAK 147
D SR P ++LS Y++ +F +Y + ++R+ ++E L+
Sbjct: 50 TIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIA 109
Query: 148 RVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSR---DQE 202
+ Q+F + EV + NW K INL ++ +++ + FG R D
Sbjct: 110 KFQNFVPAIQHEVRKFMAANW--DKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR 167
Query: 203 AFV-------------AVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLK 249
F AV + A E +I+ II K+ +
Sbjct: 168 RFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN-- 225
Query: 250 NCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMM 308
K DL+ LL + G + ++ + +I AG TS+ T W+M +M
Sbjct: 226 --KDSSTSDLLSGLLSAVYRDG---TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM 280
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSI-DEMKFLKLVVKETLRLHPAAPLLIPRECGQR 367
+P +K +A +E+ ++N ++ DEM F + +E++R P L++ R+
Sbjct: 281 -HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMAD 338
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
++ + +P + + D E + EP + PER D V+ +I FGAG
Sbjct: 339 VKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----FIGFGAGV 391
Query: 428 RICPGMSFGLASVELPLAMLLYHFDWKL 455
C G FGL V+ LA +D++L
Sbjct: 392 HKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 185/441 (41%), Gaps = 49/441 (11%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 67
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 68 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 120
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 121 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 180
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEH-KKRKATLKNCKTGDDED 258
V ++E + N D + QE ++++ +++++ RKA+ G+ D
Sbjct: 181 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS------GEQSD 234
Query: 259 LVDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++K
Sbjct: 235 --DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK 292
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
A E V + + ++K++ +V+ E LRL P P + + G + P
Sbjct: 293 AAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTVPAF--SLYAKEDTVLGGEYP 349
Query: 377 VKA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGM 433
++ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 350 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQ 406
Query: 434 SFGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 407 QFALHEATLVLGMMLKHFDFE 427
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD-- 63
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 64 ----ESRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I G ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + PFG G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + P+G G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPWGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 181/438 (41%), Gaps = 43/438 (9%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 101 --DVVFASRPHFPAAQILSYNYRDIIFSSYG--DSWKQLRKICVSELLSAKRVQSFQSIR 156
D + P F + D +F+S+ +WK+ I + S + ++ + ++
Sbjct: 66 RFDKNLSQAPKF-----VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHAMM 119
Query: 157 -EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAFVA 206
+ V + W A I + +++ L F R RDQ + V
Sbjct: 120 VDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVR 179
Query: 207 VIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVD 261
++E + N D + QE ++++ ++++ K +G+ D D
Sbjct: 180 ALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD--D 232
Query: 262 VLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQA 319
+L + D ++ L ++I+ I AAG E ++ + +A+ ++KNP ++KA
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAE 292
Query: 320 EVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKA 379
E V + + ++K++ +V+ E LRL P AP + + G + P++
Sbjct: 293 EAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEK 349
Query: 380 --RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
++V + RD W + E F PERF + S + + PFG G+R C G F
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFA 406
Query: 437 LASVELPLAMLLYHFDWK 454
L L L M+L HFD++
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 18/232 (7%)
Query: 228 QEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSF--LTTDHIKAVI 285
QE ++++ ++++ K +G+ D D+L + D ++ L ++I+ I
Sbjct: 206 QEDIKVMNDLVD-----KIIADRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQI 258
Query: 286 SDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLV 345
AG E ++ + +A+ ++KNP V++KA E V + + ++K++ +V
Sbjct: 259 ITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMV 317
Query: 346 VKETLRLHPAAPLLIPRECGQRCQINGFDIPVKA--RVIVNAWAIGRDPEYWTEP-ESFI 402
+ E LRL P AP + + G + P++ ++V + RD W + E F
Sbjct: 318 LNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 403 PERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWK 454
PERF + S + PFG G+R C G F L L L M+L HFD++
Sbjct: 376 PERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 185/460 (40%), Gaps = 69/460 (15%)
Query: 30 SQTNNRISNPPPGPWKLPVIGNLYQLAGS---LPHHGLRDLSKKYGPLMLLQLGEVPTII 86
S R ++PP P +P +G++ Q + RDL K G + + +G I
Sbjct: 9 SFNTTRPTDPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDL--KSG-VFTISIGGQRVTI 65
Query: 87 VSSPEVAKEVMKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC 139
V P H F+ P +ILS Y +F +Y + ++R+
Sbjct: 66 VGDPH-------EHSRFFS-----PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQL 113
Query: 140 --VSELLSAKRVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFG 195
++E L+ + Q+F + EV + NW + VINL ++ +++ + FG
Sbjct: 114 NFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEG--VINLLEDCGAMIINTACQCLFG 171
Query: 196 NRSRDQEAFVAVIEETTKVISGFNIADV----------------ETLHQEGVRIVENIIN 239
R + + +K+ S A V E +I+ II
Sbjct: 172 EDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIV 231
Query: 240 EHKKRKATLKNCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSAT 298
+K +A+ K + DL+ LLK + G + ++ + +I AG TS
Sbjct: 232 AREKEEAS----KDNNTSDLLGGLLKAVYRDG---TRMSLHEVCGMIVAAMFAGQHTSTI 284
Query: 299 TVDWAMCEMM--KNPRVMKKAQAEVREVFHRTGKVN-ETSIDEMKFLKLVVKETLRLHPA 355
T W+M +M KN + + K E+ E ++N + +DEM F + V+E++R P
Sbjct: 285 TTSWSMLHLMHPKNKKWLDKLHKEIDEF---PAQLNYDNVMDEMPFAERCVRESIRRDPP 341
Query: 356 APLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKG 415
L++ R ++ + +P + + D E + P + PER D VD
Sbjct: 342 L-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA- 397
Query: 416 TNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
+I FGAG C G F L V+ LA +D++L
Sbjct: 398 ----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 23/255 (9%)
Query: 233 IVENIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAG 292
+V+ II E R+A+ + +DL+ LL + D + I + I G
Sbjct: 226 LVDEIIAE---RRASGQK-----PDDLLTALL--EAKDDNGDPIGEQEIHDQVVAILTPG 275
Query: 293 SETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTG--KVNETSIDEMKFLKLVVKETL 350
SET A+T+ W + + +P + + EV V TG V + +++ V+ E +
Sbjct: 276 SETIASTIMWLLQALADHPEHADRIRDEVEAV---TGGRPVAFEDVRKLRHTGNVIVEAM 332
Query: 351 RLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHS 410
RL PA +L R + ++ G+ IP A +I + +AI RDP+ + + F P+R+L
Sbjct: 333 RLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPER 391
Query: 411 VDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIKHEDLDMTEAF 470
+ PF AG+R CP F +A + L A L + ++ G
Sbjct: 392 A-ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSND-----AVRV 445
Query: 471 GVTVRRKQDLCMTPI 485
G+T+ R DL + P+
Sbjct: 446 GITL-RPHDLLVRPV 459
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + P G G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPHGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 47/440 (10%)
Query: 41 PGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTH 100
P P + NL L P L ++ + G + + T +SS + KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE- 64
Query: 101 DVVFASRPHFPAAQILSYNYRDI----IFSSYG--DSWKQLRKICVSELLSAKRVQSFQS 154
SR +Q L + RD +F+S+ +WK+ I + S + ++ + +
Sbjct: 65 -----SRFDKNLSQALKF-VRDFAGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHA 117
Query: 155 IR-EAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNR----SRDQ-----EAF 204
+ + V + W A I + +++ L F R RDQ +
Sbjct: 118 MMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 205 VAVIEETTKVISGFNIADV-----ETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDL 259
V ++E + N D + QE ++++ ++++ K +G+ D
Sbjct: 178 VRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD-----KIIADRKASGEQSD- 231
Query: 260 VDVLLKIQGHGDLDSF--LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKA 317
D+L + D ++ L ++I+ I AG ET++ + +A+ ++KNP V++KA
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 290
Query: 318 QAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPV 377
E V + + ++K++ +V+ E LRL P AP + + G + P+
Sbjct: 291 AEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPL 347
Query: 378 KA--RVIVNAWAIGRDPEYWTEP-ESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMS 434
+ ++V + RD W + E F PERF + S + P G G+R C G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPAGNGQRACIGQQ 404
Query: 435 FGLASVELPLAMLLYHFDWK 454
F L L L M+L HFD++
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 185/459 (40%), Gaps = 69/459 (15%)
Query: 31 QTNNRISNPPPGPWKLPVIGNLYQLAGS---LPHHGLRDLSKKYGPLMLLQLGEVPTIIV 87
+T+ + PP P +P +G++ Q + RDL K G + + +G IV
Sbjct: 1 KTSGKGKLPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDL--KSG-VFTISIGGQRVTIV 57
Query: 88 SSPEVAKEVMKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC- 139
P H F+ P +ILS Y +F +Y + ++R+
Sbjct: 58 GDPH-------EHSRFFS-----PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLN 105
Query: 140 -VSELLSAKRVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGN 196
++E L+ + Q+F + EV + NW + VINL ++ +++ + FG
Sbjct: 106 FLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEG--VINLLEDCGAMIINTACQCLFGE 163
Query: 197 RSRDQEAFVAVIEETTKVISGFNIADV----------------ETLHQEGVRIVENIINE 240
R + + +K+ S A V E +I+ II
Sbjct: 164 DLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVA 223
Query: 241 HKKRKATLKNCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATT 299
+K +A+ K + DL+ LLK + G + ++ + +I AG TS T
Sbjct: 224 REKEEAS----KDNNTSDLLGGLLKAVYRDG---TRMSLHEVCGMIVAAMFAGQHTSTIT 276
Query: 300 VDWAMCEMM--KNPRVMKKAQAEVREVFHRTGKVN-ETSIDEMKFLKLVVKETLRLHPAA 356
W+M +M KN + + K E+ E ++N + +DEM F + V+E++R P
Sbjct: 277 TSWSMLHLMHPKNKKWLDKLHKEIDEF---PAQLNYDNVMDEMPFAERCVRESIRRDPPL 333
Query: 357 PLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGT 416
L++ R ++ + +P + + D E + P + PER D VD
Sbjct: 334 -LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-- 388
Query: 417 NFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
+I FGAG C G F L V+ LA +D++L
Sbjct: 389 ---FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 181/452 (40%), Gaps = 69/452 (15%)
Query: 38 NPPPGPWKLPVIGNLYQLAGS---LPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAK 94
PP P +P +G++ Q + RDL K G + + +G IV P
Sbjct: 2 TPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDL--KSG-VFTISIGGQRVTIVGDPH--- 55
Query: 95 EVMKTHDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSELLS 145
H F+ P +ILS Y +F +Y + ++R+ ++E L+
Sbjct: 56 ----EHSRFFS-----PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELT 106
Query: 146 AKRVQSFQSIREAEVSDLI--NWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQEA 203
+ Q+F + EV + NW + VINL ++ +++ + FG R +
Sbjct: 107 IAKFQNFVPAIQHEVRKFMAENWKEDEG--VINLLEDCGAMIINTACQCLFGEDLRKRLN 164
Query: 204 FVAVIEETTKVISGFNIADV----------------ETLHQEGVRIVENIINEHKKRKAT 247
+ +K+ S A V E +I+ II +K +A+
Sbjct: 165 ARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEAS 224
Query: 248 LKNCKTGDDEDLVDVLLK-IQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCE 306
K + DL+ LLK + G + ++ + +I AG TS T W+M
Sbjct: 225 ----KDNNTSDLLGGLLKAVYRDG---TRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLH 277
Query: 307 MM--KNPRVMKKAQAEVREVFHRTGKVN-ETSIDEMKFLKLVVKETLRLHPAAPLLIPRE 363
+M KN + + K E+ E ++N + +DEM F + V+E++R P L++ R
Sbjct: 278 LMHPKNKKWLDKLHKEIDEF---PAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRM 333
Query: 364 CGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPF 423
++ + +P + + D E + P + PER D VD +I F
Sbjct: 334 VKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGF 386
Query: 424 GAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
GAG C G F L V+ LA +D++L
Sbjct: 387 GAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 177/449 (39%), Gaps = 65/449 (14%)
Query: 39 PPPGPWKLPVIGNLYQLAGSLPHHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMK 98
PP P +G++ Q G P + KKYG + + + +
Sbjct: 5 PPVVHGTTPFVGHIIQF-GKDPLGFMLKAKKKYGGIFTMNI------------CGNRITV 51
Query: 99 THDVVFASRPHFPAAQILS----YNYRDIIFS---SYGDSWKQLRKIC--VSELLSAKRV 149
DV S+ P +ILS Y++ +F +Y + ++R+ ++E L+ +
Sbjct: 52 VGDVHQHSKFFTPRNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKF 111
Query: 150 QSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSR---DQEAFVA 206
Q+F + EV + +K IN+ + +++ + FG R D F
Sbjct: 112 QNFAPSIQHEVRKFMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQFAQ 171
Query: 207 VIEETTKVI----------------SGFNIADVETLHQEGVRIVENIINEHKKRKATLKN 250
++ + + + D Q+ I+ II +K +A
Sbjct: 172 LLAKMESCLIPAAVFLPWILKLPLPQSYRCRDARAELQD---ILSEIIIAREKEEAQ--- 225
Query: 251 CKTGDDEDLVDVLLKIQGHGDLDSFLTTDH-IKAVISDIFAAGSETSATTVDWAMCEMM- 308
D + D+L + G D + H + +I AG TS T W++ +M
Sbjct: 226 ----KDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMD 281
Query: 309 -KNPRVMKKAQAEVREVFHRTGKVN-ETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQ 366
+N R + K E+ E ++N + ++EM F + +E++R P +L+ R+ +
Sbjct: 282 PRNKRHLAKLHQEIDEF---PAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLM-RKVLK 337
Query: 367 RCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAG 426
Q+ + +P + + +D E + P + PER + K + + FGAG
Sbjct: 338 PVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER------NMKLVDGAFCGFGAG 391
Query: 427 RRICPGMSFGLASVELPLAMLLYHFDWKL 455
C G FGL V+ LA +L +D++L
Sbjct: 392 VHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 177/412 (42%), Gaps = 45/412 (10%)
Query: 68 SKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKT--HDVVFASRPHFPAAQILSYNYRDIIF 125
++ YG M + + T+I+S +MK + F S+ Q + + + IIF
Sbjct: 78 NRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKL---GLQCIGMHEKGIIF 134
Query: 126 SSYGDSWKQLRKICVSELLSAKRVQSFQSIREAEVS--DLINWISSKAGSVINLTQNVHS 183
++ + WK R + L V+ E+ + D + +++++G V LT +
Sbjct: 135 NNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTL-LRR 193
Query: 184 LMYGITSRAAFGNRSRDQEAFVAVIEETTKVISG--------FNIADVETLHQEGVR--- 232
+M TS F D+ A V I+ F I+ + +++ V+
Sbjct: 194 VMLD-TSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLK 252
Query: 233 -IVENIINEHKKRKAT---LKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDI 288
+E +I E ++R +T L+ C D L+ + GDL T +++ I ++
Sbjct: 253 DAIEVLIAEKRRRISTEEKLEECM-----DFATELILAEKRGDL----TRENVNQCILEM 303
Query: 289 FAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVF-HRTGKVNETSIDEMKFLKLVVK 347
A +T + ++ + + + K+P V + E++ V R K+++ I ++K ++ +
Sbjct: 304 LIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDD--IQKLKVMENFIY 361
Query: 348 ETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFL 407
E++R P L++ R+ + I+G+ + +I+N + R E++ +P F E F
Sbjct: 362 ESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENFA 419
Query: 408 DHSVDYKGTNFEYI-PFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNG 458
K + Y PFG G R C G + ++ L LL F K G
Sbjct: 420 ------KNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQG 465
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 164/401 (40%), Gaps = 52/401 (12%)
Query: 61 HHGLRDLSKKYGPLMLLQLGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPA-AQILS-- 117
HH ++ GP + + V VS P + K+++ + DV +R H+PA +++
Sbjct: 17 HHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTW 76
Query: 118 ----YNYRDIIFSSYGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISS-KAG 172
+ + +F++YG + ++LR++ V+ SA+RV + + EA V+ L++ ++ AG
Sbjct: 77 PLALWVAVENMFTAYGPNHRKLRRL-VAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAG 135
Query: 173 SVINLTQNVHSLMYGITSRAAFGNRSRDQEAFVAVIEETTKVISGFNIADVETLHQEGVR 232
++L Q + + G ++ F A+++ F+ TL Q +
Sbjct: 136 EPVDLRQELAYPLPIAVIGHLMGVPQDRRDGFRALVDGV------FDT----TLDQAEAQ 185
Query: 233 IVENIINEHKKRKATLKNCKTGDD-EDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAA 291
+ E + K GDD L+ +G GD L+ + ++ + + +A
Sbjct: 186 ANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGD---RLSPEELRDTLLLMISA 242
Query: 292 GSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLR 351
G ET+ +D A+ ++ P + R G+V VV+ETLR
Sbjct: 243 GYETTVNVIDQAVHTLLTRPDQL---------ALVRKGEVTWAD---------VVEETLR 284
Query: 352 LHPAAPLLIPRECGQRCQI-NGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHS 410
PA L R + +G I ++ + A R P++ + ++F
Sbjct: 285 HEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTF--------- 335
Query: 411 VDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHF 451
D T E++ FG G C G V L L L F
Sbjct: 336 -DATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 130/371 (35%), Gaps = 75/371 (20%)
Query: 92 VAKEVMKTHDVVFASRPHFPAAQIL-----------------SYNYRDI-------IFSS 127
V E + H +F P FP A I ++ YR + + +
Sbjct: 23 VLLEWGRAHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLLTD 82
Query: 128 YGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYG 187
+G SWK+ RK L +S + REA + + G +L + +L
Sbjct: 83 WGKSWKEARKALKDPFLP----KSVRGYREAMEEEAWAFFGEWRGEERDLDHEMLALSLR 138
Query: 188 ITSRAAFGNRSRDQEAFVAVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKAT 247
+ RA FG + ++ E K + +T + + K R A
Sbjct: 139 LLGRALFG-----KPLSPSLAEHALKALDRIM---AQTRSPLALLDLAAEARFRKDRGAL 190
Query: 248 LKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEM 307
+ + + H L S L + + + AG ET A+ + W+ +
Sbjct: 191 YREAEA------------LIVHPPL-SHLPRERALSEAVTLLVAGHETVASALTWSFLLL 237
Query: 308 MKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQR 367
P K+ +E LRL+P A +L R +R
Sbjct: 238 SHRPDWQKRVAESEEAA------------------LAAFQEALRLYPPAWILTRRL--ER 277
Query: 368 CQINGFD-IPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAG 426
+ G D +P ++++ + R Y+ E E+F PERFL G Y PFG G
Sbjct: 278 PLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFLAERGTPSG---RYFPFGLG 332
Query: 427 RRICPGMSFGL 437
+R+C G F L
Sbjct: 333 QRLCLGRDFAL 343
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYW 395
+ + + +L V+E R +P P ++ R Q + G P +V+++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 396 TEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELPLAMLLYHF 451
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 452 DWKLPN 457
+ +P+
Sbjct: 383 RYDVPD 388
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 282 KAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVF-------HRTGKVNET 334
+A++ ++A W + ++KNP + + E+ + +T + +
Sbjct: 253 RALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 311
Query: 335 SIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQI-----NGFDIPVKARVIVNAW-AI 388
+D L V+ E+LRL AAP I RE + F++ R+++ + +
Sbjct: 312 VLDSTPVLDSVLSESLRL-TAAPF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 369
Query: 389 GRDPEYWTEPESFIPERFL--------DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASV 440
RDPE +T+PE F RFL D D K +P+GAG C G S+ + S+
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 429
Query: 441 ELPLAMLLYHFDWKLPNG-IKHEDLDMTE-AFGV 472
+ + ++L H D +L N ++ + D++ FG+
Sbjct: 430 KQFVFLVLVHLDLELINADVEIPEFDLSRYGFGL 463
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 24/203 (11%)
Query: 247 TLKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCE 306
+K + DL+ +L + G L+ I A+I ++ A +E + T+ +
Sbjct: 228 VIKERRVNPGSDLISILCTSEYEG---MALSDKDILALILNVLLAATEPADKTLALMIYH 284
Query: 307 MMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQ 366
++ NP M A+ R + R + ETLR P L IPR+ Q
Sbjct: 285 LLNNPEQMNDVLAD-RSLVPRA-----------------IAETLRYKPPVQL-IPRQLSQ 325
Query: 367 RCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESF-IPERFLDHSVDYKGTNFEYIPFGA 425
+ G +I V A RDPE + +P+ F I L + G ++ FG+
Sbjct: 326 DTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAA-RHLAFGS 384
Query: 426 GRRICPGMSFGLASVELPLAMLL 448
G C G +F +E+ ++L
Sbjct: 385 GIHNCVGTAFAKNEIEIVANIVL 407
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 25/194 (12%)
Query: 302 WAMCEMMKNPRVMKKAQAEVREVF-------HRTGKVNETSIDEMKFLKLVVKETLRLHP 354
W + ++KNP + + E+ + +T + + +D L V+ E+LRL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 342
Query: 355 AAPLLIPRECGQRCQI-----NGFDIPVKARVIVNAW-AIGRDPEYWTEPESFIPERFL- 407
AAP I RE + F++ R+++ + + RDPE +T+PE F RFL
Sbjct: 343 AAPF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLN 401
Query: 408 -------DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNG-I 459
D D K +P+GAG C G S+ + S++ + ++L H D +L N +
Sbjct: 402 PDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV 461
Query: 460 KHEDLDMTE-AFGV 472
+ + D++ FG+
Sbjct: 462 EIPEFDLSRYGFGL 475
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYW 395
+ + + +L V+E R +P P ++ R Q + G P +V+++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 396 TEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELPLAMLLYHF 451
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 452 DWKLPN 457
+ +P+
Sbjct: 375 RYDVPD 380
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYW 395
+ + + +L V+E R +P P ++ R Q + G P +V+++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 396 TEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELPLAMLLYHF 451
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 452 DWKLPN 457
+ +P+
Sbjct: 383 RYDVPD 388
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYW 395
+ + + +L V+E R +P P ++ R Q + G P +V+++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 396 TEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELPLAMLLYHF 451
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 452 DWKLPN 457
+ +P+
Sbjct: 383 RYDVPD 388
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYW 395
+ + + +L V+E R +P P ++ R Q + G P +V+++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 396 TEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELPLAMLLYHF 451
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 452 DWKLPN 457
+ +P+
Sbjct: 375 RYDVPD 380
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYW 395
+ + + +L V+E R +P P ++ R Q + G P +V+++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 396 TEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELPLAMLLYHF 451
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 452 DWKLPN 457
+ +P+
Sbjct: 375 RYDVPD 380
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 130/365 (35%), Gaps = 75/365 (20%)
Query: 98 KTHDVVFASRPHFPAAQIL-----------------SYNYRDI-------IFSSYGDSWK 133
+ H +F P FP A I ++ YR + + + +G+SWK
Sbjct: 29 RAHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGESWK 88
Query: 134 QLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAA 193
+ RK L ++ + REA + + G +L + +L + RA
Sbjct: 89 EARKALKDPFLP----KNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRAL 144
Query: 194 FGNRSRDQEAFVAVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLKNCKT 253
FG + ++ E K + +T + + K R A + +
Sbjct: 145 FG-----KPLSPSLAEHALKALDRIM---AQTRSPLALLDLAAEARFRKDRGALYREAEA 196
Query: 254 GDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRV 313
+ H L S L + + + AG ET A+ + W+ + P
Sbjct: 197 ------------LIVHPPL-SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDW 243
Query: 314 MKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGF 373
K+ +E LRL+P A +L R +R + G
Sbjct: 244 QKRVAESEEAA------------------LAAFQEALRLYPPAWILTRRL--ERPLLLGE 283
Query: 374 D-IPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPG 432
D +P ++++ + R ++ + E+F PERFL+ G Y PFG G+R+C G
Sbjct: 284 DRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFLEERGTPSG---RYFPFGLGQRLCLG 338
Query: 433 MSFGL 437
F L
Sbjct: 339 RDFAL 343
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 128/322 (39%), Gaps = 45/322 (13%)
Query: 122 DIIFSSYGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNV 181
D + S G ++LR + + + +R+ + Q + V LI+ + + Q+
Sbjct: 88 DFLQSLDGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQGD---FDFVQHF 143
Query: 182 HSLMYGITSRAAFGNRSRDQEAFVAVIEETTKVISGFNIADVETLHQEGV-RIVENIINE 240
+ + G D + + ET ++ N D+ ++G+ R+ + ++
Sbjct: 144 AHPLPALVMCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAA 203
Query: 241 HKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTV 300
+KRK + GDD L +++ G LD + ++ +++ + AG ET+ +
Sbjct: 204 IEKRK-----VEPGDD--LTSDIVRAFHDGVLDDY----ELRTLVATVLVAGYETTNHQL 252
Query: 301 DWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLI 360
AM + ++P K + + + V+E LR P P+
Sbjct: 253 ALAMYDFAQHPDQWMKIK------------------ENPELAPQAVEEVLRWSPTLPVTA 294
Query: 361 PRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEY 420
R + ++NG IP V + A RDP + + + F D +V + +
Sbjct: 295 TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF------DITVKREAPS--- 345
Query: 421 IPFGAGRRICPGMSFGLASVEL 442
I FG G C G + LA +EL
Sbjct: 346 IAFGGGPHFCLGTA--LARLEL 365
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 128/322 (39%), Gaps = 45/322 (13%)
Query: 122 DIIFSSYGDSWKQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNV 181
D + S G ++LR + + + +R+ + Q + V LI+ + + Q+
Sbjct: 98 DFLQSLDGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQGD---FDFVQHF 153
Query: 182 HSLMYGITSRAAFGNRSRDQEAFVAVIEETTKVISGFNIADVETLHQEGV-RIVENIINE 240
+ + G D + + ET ++ N D+ ++G+ R+ + ++
Sbjct: 154 PHPLPALVMCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAA 213
Query: 241 HKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTV 300
+KRK + GDD L +++ G LD + ++ +++ + AG ET+ +
Sbjct: 214 IEKRK-----VEPGDD--LTSDIVRAFHDGVLDDY----ELRTLVATVLVAGYETTNHQL 262
Query: 301 DWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLI 360
AM + ++P K + + + V+E LR P P+
Sbjct: 263 ALAMYDFAQHPDQWMKIK------------------ENPELAPQAVEEVLRWSPTLPVTA 304
Query: 361 PRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEY 420
R + ++NG IP V + A RDP + + + F D +V + +
Sbjct: 305 TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF------DITVKREAPS--- 355
Query: 421 IPFGAGRRICPGMSFGLASVEL 442
I FG G C G + LA +EL
Sbjct: 356 IAFGGGPHFCLGTA--LARLEL 375
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 48/249 (19%)
Query: 203 AFVAVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDV 262
V ++E TK + +A V EG+ ++ +++E +R+ L+N D++ +
Sbjct: 186 GLVPRVDEETKTL----VASV----TEGLALLHGVLDE--RRRNPLEN-------DVLTM 228
Query: 263 LLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVR 322
LL+ + G S L+T + A++ I AAG++T+ + +A+ ++++P ++ +AE
Sbjct: 229 LLQAEADG---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP- 284
Query: 323 EVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVI 382
++ + E LR + R Q + G I V
Sbjct: 285 -----------------GLMRNALDEVLRFENILRIGTVRFARQDLEYCGASIKKGEMVF 327
Query: 383 VNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVEL 442
+ + RD ++ P+ F R S+ Y G G +CPG+S E+
Sbjct: 328 LLIPSALRDGTVFSRPDVFDVRRDTSASLAY----------GRGPHVCPGVSLARLEAEI 377
Query: 443 PLAMLLYHF 451
+ + F
Sbjct: 378 AVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 48/249 (19%)
Query: 203 AFVAVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVDV 262
V ++E TK + +A V EG+ ++ +++E +R+ L+N D++ +
Sbjct: 186 GLVPRVDEETKTL----VASV----TEGLALLHGVLDE--RRRNPLEN-------DVLTM 228
Query: 263 LLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVR 322
LL+ + G S L+T + A++ I AAG++T+ + +A+ ++++P ++ +AE
Sbjct: 229 LLQAEADG---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP- 284
Query: 323 EVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVI 382
++ + E LR + R Q + G I V
Sbjct: 285 -----------------GLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVF 327
Query: 383 VNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVEL 442
+ + RD ++ P+ F R S+ Y G G +CPG+S E+
Sbjct: 328 LLIPSALRDGTVFSRPDVFDVRRDTSASLAY----------GRGPHVCPGVSLARLEAEI 377
Query: 443 PLAMLLYHF 451
+ + F
Sbjct: 378 AVGTIFRRF 386
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 34/189 (17%)
Query: 257 EDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
EDL+ L+ ++ GD LT D I A + + AG ET+ + A M++ P
Sbjct: 225 EDLMSGLVAVEESGDQ---LTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTP----- 276
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
G+ + D + V++ET+R P L + R G I +P
Sbjct: 277 ------------GQWAALAADGSR-ASAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVP 322
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFG 436
+++ A RDP P+ F P+R ++ FG G C G
Sbjct: 323 KGDTMLLLLAAAHRDPTIVGAPDRFDPDR----------AQIRHLGFGKGAHFCLGAPLA 372
Query: 437 L--ASVELP 443
A+V LP
Sbjct: 373 RLEATVALP 381
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Query: 343 KLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFI 402
++ V+E R +P P L + N + V+++ + DP W P+ F
Sbjct: 277 EMFVQEVRRYYPFGPFLGAL-VKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 403 PERFLDHSVDYKGTNFEYIPFGAGR----RICPGMSFGLASVELPLAMLLYHFDWKLPNG 458
PERF + + F+ IP G G CPG + ++ L L++ ++ +P
Sbjct: 336 PERFAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ 391
Query: 459 IKHEDL 464
H L
Sbjct: 392 SLHYSL 397
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/367 (18%), Positives = 140/367 (38%), Gaps = 59/367 (16%)
Query: 86 IVSSPEVAKEVMKTHDVVFASRPHFPA----AQILSYNYRDIIFSSYGDSWKQLRKICVS 141
++S P V+ ++ RP FPA Q +R I + + + R + +
Sbjct: 67 LLSDPRVSADI---------RRPGFPALGEGEQEAGARFRPFIRTDAPEHTRYRRMLLPA 117
Query: 142 ELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQ 201
+ +RV++ + +A V ++++ + + G V ++ +++ + G D
Sbjct: 118 --FTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICEL-LGIPRHDL 174
Query: 202 EAFVAVIEETTKVISGFNIADVETLHQEGVRIVENIINEHKKRKATLKNCKTGDDEDLVD 261
E F V ISG + E + + + + +R+ ++ D
Sbjct: 175 EFFRDVTR-----ISGSRNSTAEQVSEALGGLFGLLGGLVAERREEPRD----------D 219
Query: 262 VLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEV 321
++ K+ + +TT+ + + + AG ET+ + + + ++ P + AE+
Sbjct: 220 LISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPEL----PAEL 275
Query: 322 REVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARV 381
R+ + + V E LR+ A + R + +++G +P V
Sbjct: 276 RK--------------DPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGV 321
Query: 382 IVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVE 441
I DPE + +PE VD+ T+ ++ FG G C G +E
Sbjct: 322 IALLAGANHDPEQFDDPE----------RVDFHRTDNHHVAFGYGVHQCVGQHLARLELE 371
Query: 442 LPLAMLL 448
+ L LL
Sbjct: 372 VALETLL 378
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 302 WAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIP 361
W M ++ +P ++ + E++ H ++ E + F V+ ETLRL AA LI
Sbjct: 275 WVMGYLLTHPEALRAVREEIQGGKHL--RLEERQKNTPVF-DSVLWETLRLTAAA--LIT 329
Query: 362 RECGQR---CQINGFDIPVKA--RVIVNAW-AIGRDPEYWTEPESFIPERFLDHSVDYK- 414
R+ Q C NG + ++ R+ V + + DP+ +PE F +RFL+ K
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 415 -----GTNFEY--IPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKL 455
G +Y +P+G +CPG F + +++ + +L FD +L
Sbjct: 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVEL 437
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 249 KNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMM 308
K GDD L L++ +GD LT I + + + AAG ET+ + + A+ +
Sbjct: 205 KRAAPGDD--LTSALIQASENGD---HLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLS 259
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRC 368
+P + +G+ ++ VV+ETLR ++ R +
Sbjct: 260 THPE---------QRALVLSGEAEWSA---------VVEETLRFSTPTSHVLIRFAAEDV 301
Query: 369 QINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNF-EYIPFGAGR 427
+ IP +IV+ A+GRD E P + +RF D T+ +I FG G
Sbjct: 302 PVGDRVIPAGDALIVSYGALGRD-ERAHGPTA---DRF-----DLTRTSGNRHISFGHGP 352
Query: 428 RICPGMSFGL--ASVELP-LAMLLYHFDWKLP 456
+CPG + A V LP L H D +P
Sbjct: 353 HVCPGAALSRMEAGVALPALYARFPHLDLAVP 384
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 118/319 (36%), Gaps = 60/319 (18%)
Query: 133 KQLRKICVSELLSAKRVQSFQSIREAEVSDLINWISSKAGSVINLTQNVHSLMYGITSRA 192
++LRK+ V LLS + EV D++ + G V + + +
Sbjct: 115 RKLRKL-VGPLLSRAAARKLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCE 171
Query: 193 AFGNRSRDQEAFVAVIEETTKVISG----FNIADVETLHQEGVRIVENIINEHKKRKATL 248
G + D++ I+ T G F+ H E + + +I +K
Sbjct: 172 ILGVPAEDEDML---IDLTNHAFGGEDELFDGMTPRQAHTEILVYFDELITARRKEPG-- 226
Query: 249 KNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMM 308
+DLV L+ D LT D + ++ G+ET+ + A+ +
Sbjct: 227 --------DDLVSTLVT-------DDDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALA 271
Query: 309 KNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLR-LHPAAPLLIPRECGQR 367
P ++ R G + + VV+E LR PA +L R
Sbjct: 272 TVPGLLTAL---------RDGSAD---------VDTVVEEVLRWTSPAMHVL--RVTTAD 311
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
ING D+P V+ A RDP + +P++F+P R + +I FG G
Sbjct: 312 VTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKPN----------RHITFGHGM 361
Query: 428 RICPGMSFGLASVELPLAM 446
C G + LA +EL + +
Sbjct: 362 HHCLGSA--LARIELSVVL 378
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 64/176 (36%), Gaps = 32/176 (18%)
Query: 276 LTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETS 335
LT D I + G+ET+ + + + +NP ++ A +R+G
Sbjct: 173 LTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALK------NRSG------ 220
Query: 336 IDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYW 395
V+ETLR + L R + IN I +VIV + RD ++
Sbjct: 221 ---------FVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFF 271
Query: 396 TEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHF 451
EP+ F R H + FG G +C G + L +L HF
Sbjct: 272 DEPDLFKIGRREMH-----------LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 346 VKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAW--AIGRDPEYWTEPESFIP 403
V+E LR P I R ++ +I D + +V W + RD E + +P+SFIP
Sbjct: 244 VEEALRFSPPVMRTI-RVTKEKVKIR--DQVIDEGELVRVWIASANRDEEVFKDPDSFIP 300
Query: 404 ERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGIKHED 463
+R T ++ FG+G +C G LA +E +A+ + +++ +K E
Sbjct: 301 DR----------TPNPHLSFGSGIHLCLGAP--LARLEARIALEEFAKKFRVKEIVKKEK 348
Query: 464 LD 465
+D
Sbjct: 349 ID 350
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 345 VVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIG--RDPEYWTEPESFI 402
+V+E LR P P + R + ++ G +P+ A V+VN W + RD + +P+ F
Sbjct: 277 IVEEVLRYRPPFPQM-QRTTTKATEVAG--VPIPADVMVNTWVLSANRDSDAHDDPDRFD 333
Query: 403 PERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHF 451
P R K + FG G C G + L ++ F
Sbjct: 334 PSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 345 VVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIG--RDPEYWTEPESFI 402
+V+E LR P P + R + ++ G +P+ A V+VN W + RD + +P+ F
Sbjct: 297 IVEEVLRYRPPFPQM-QRTTTKATEVAG--VPIPADVMVNTWVLSANRDSDAHDDPDRFD 353
Query: 403 PERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLLYHF 451
P R K + FG G C G + L ++ F
Sbjct: 354 PSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 81/218 (37%), Gaps = 41/218 (18%)
Query: 245 KATLKNCKTGDDEDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAM 304
K ++ K +D++ +LLK G LT + + + AG ET+ + ++
Sbjct: 192 KELIQKRKRHPQQDMISMLLK----GREKDKLTEEEAASTCILLAIAGHETTVNLISNSV 247
Query: 305 CEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPREC 364
++++P + K + + + V+E LR + + + R
Sbjct: 248 LCLLQHPEQLLKLR------------------ENPDLIGTAVEECLR-YESPTQMTARVA 288
Query: 365 GQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFG 424
+ I G I +V + A RDP +T P+ F D + ++ FG
Sbjct: 289 SEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF----------DITRSPNPHLSFG 338
Query: 425 AGRRICPGMSFGLASVELPLAMLLYH--------FDWK 454
G +C G S ++ + LL F+W+
Sbjct: 339 HGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWR 376
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 35/199 (17%)
Query: 252 KTGDDED-LVDVLLKIQ-GHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMK 309
K + ED L+D L+ Q GDLD D + + + AG ET+ + +++
Sbjct: 206 KQAEPEDGLLDELIARQLEEGDLDH----DEVVMIALVLLVAGHETTVNAIALGALTLIQ 261
Query: 310 NPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQ 369
+P ++ + G V+ VV+E LR + ++ R + +
Sbjct: 262 HPE-------QIDVLLRDPGAVSG-----------VVEELLRFTSVSDHIV-RMAKEDIE 302
Query: 370 INGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRI 429
+ G I V+V+ + RD + + P+ F R H ++ FG G
Sbjct: 303 VGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARH----------HVGFGHGIHQ 352
Query: 430 CPGMSFGLASVELPLAMLL 448
C G + A +E+ L L
Sbjct: 353 CLGQNLARAELEIALGGLF 371
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 312 RVMKKAQAEVREVFHRTG-KVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQI 370
+V + E+R V G ++ +I++M+ K VV E LR P R + I
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVI 374
Query: 371 NGFD--IPVKARVIVNAWA--IGRDPEYWTEPESFIPERFL 407
D VKA ++ + RDP+ + + F+PERF+
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 312 RVMKKAQAEVREVFHRTG-KVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQI 370
+V + E+R V G ++ +I++M+ K VV E LR P R + I
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVI 374
Query: 371 NGFD--IPVKARVIVNAWA--IGRDPEYWTEPESFIPERFL 407
D VKA ++ + RDP+ + + F+PERF+
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|1G0D|A Chain A, Crystal Structure Of Red Sea Bream Transglutaminase
Length = 695
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 158 AEV-SDLINWISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQEAFVAVIEETTKVIS 216
AEV +D I WI K G +T++ S+ I++++ +GN D E + K
Sbjct: 392 AEVNADTIYWIVQKDGQRRKITEDHASVGKNISTKSVYGNHREDVTLHYKYPEGSQK--- 448
Query: 217 GFNIADVETLHQEGVRIVE--NIINEHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDS 274
+ E + G R+ E N I E + + ++K+ + D DV+++++ G D+
Sbjct: 449 -----EREVYKKAGRRVTEPSNEIAEQGRLQLSIKHAQPVFGTDF-DVIVEVKNEGGRDA 502
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 66/178 (37%), Gaps = 29/178 (16%)
Query: 271 DLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGK 330
D S L+ D I + AG ET+ + A+ + +A +V + T +
Sbjct: 234 DTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTL--------RAHRDVLDELRTTPE 285
Query: 331 VNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGR 390
+++E+ +R P + R + ++ DIP +RV+ + R
Sbjct: 286 STPAAVEEL----------MRYDPPV-QAVTRWAYEDIRLGDHDIPRGSRVVALLGSANR 334
Query: 391 DPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
DP + +P+ R + V FG G C G + A E+ L LL
Sbjct: 335 DPARFPDPDVLDVHRAAERQVG----------FGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 329 GKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQIN------GFDIPVKARVI 382
G V +I++M K VV E+LR+ P P P+ + F++ +
Sbjct: 317 GNVTLEAIEQMPLTKSVVYESLRIEPPVP---PQYGKAKSNFTIESHDATFEVKKGEMLF 373
Query: 383 VNAWAIGRDPEYWTEPESFIPERFL 407
+DP+ + PE ++P+RF+
Sbjct: 374 GYQPFATKDPKVFDRPEEYVPDRFV 398
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 28/172 (16%)
Query: 278 TDHIKAVIS-DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI 336
+D + A I F AG ++ + + A+ +++ P ++R + H ++ +
Sbjct: 219 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGV 270
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E+ + L + L PR Q+ + V+V DPE++
Sbjct: 271 EELLRINLAFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
P S +R S ++ FG G+ CPG + G ++ + LL
Sbjct: 321 NPGSIELDRPNPTS---------HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 28/172 (16%)
Query: 278 TDHIKAVIS-DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI 336
+D + A I F AG ++ + + A+ +++ P ++R + H ++ +
Sbjct: 218 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGV 269
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E+ + L + L PR Q+ + V+V DPE++
Sbjct: 270 EELLRINLSFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
P S +R S ++ FG G+ CPG + G ++ + LL
Sbjct: 320 NPGSIELDRPNPTS---------HLAFGRGQHFCPGSALGRRHAQIGIEALL 362
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 28/172 (16%)
Query: 278 TDHIKAVIS-DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI 336
+D + A I F AG ++ + + A+ +++ P ++R + H ++ +
Sbjct: 219 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGV 270
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E+ + L + L PR Q+ + V+V DPE++
Sbjct: 271 EELLRINLSFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
P S +R S ++ FG G+ CPG + G ++ + LL
Sbjct: 321 NPGSIELDRPNPTS---------HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 28/172 (16%)
Query: 278 TDHIKAVIS-DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI 336
+D + A I F AG ++ + + A+ +++ P ++R + H ++ +
Sbjct: 219 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGV 270
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E+ + L + L PR Q+ + V+V DPE++
Sbjct: 271 EELLRINLSFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
P S +R S ++ FG G+ CPG + G ++ + LL
Sbjct: 321 NPGSIELDRPNPTS---------HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 288 IFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDEMKFLKLVVK 347
+ AG ET+A + + ++ +P + +A G+ + V+
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQLTVVKAN-------PGRT-----------PMAVE 283
Query: 348 ETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFL 407
E LR A + R + +I G I VIV+ + DP + +P ER
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA 343
Query: 408 DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVEL 442
H ++ FG G C G + LA +EL
Sbjct: 344 RH----------HLAFGFGPHQCLGQN--LARMEL 366
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 28/172 (16%)
Query: 278 TDHIKAVIS-DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI 336
+D + A I F AG + + + A+ +++ P ++R + H ++ +
Sbjct: 219 SDELFATIGVTFFGAGVIATGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGV 270
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E+ + L + L PR Q+ + V+V DPE++
Sbjct: 271 EELLRINLSFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
P S +R S ++ FG G+ CPG + G ++ + LL
Sbjct: 321 NPGSIELDRPNPTS---------HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
+I G I V V+ A RDPE + +P+ +D++ + ++ FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGFGP 350
Query: 428 RICPGMSFGLASVEL 442
CPG EL
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 366 QRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGA 425
+ +I G I V V+ A RDPE + +P+ +D++ + ++ FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGF 348
Query: 426 GRRICPGMSFGLASVEL 442
G CPG EL
Sbjct: 349 GPHYCPGGMLARLESEL 365
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 366 QRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGA 425
+ +I G I V V+ A RDPE + +P+ +D++ + ++ FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGF 348
Query: 426 GRRICPGMSFGLASVEL 442
G CPG EL
Sbjct: 349 GPHYCPGGMLARLESEL 365
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 366 QRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGA 425
+ +I G I V V+ A RDPE + +P+ +D++ + ++ FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGF 348
Query: 426 GRRICPGMSFGLASVEL 442
G CPG EL
Sbjct: 349 GPHYCPGGMLARLESEL 365
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 366 QRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGA 425
+ +I G I V V+ A RDPE + +P+ +D++ + ++ FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGF 348
Query: 426 GRRICPGMSFGLASVEL 442
G CPG EL
Sbjct: 349 GPHYCPGGMLARLESEL 365
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 368 CQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGR 427
+I G I V V+ A RDPE + +P+ +D++ + ++ FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGFGP 350
Query: 428 RICPGMSFGLASVEL 442
CPG EL
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 366 QRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGA 425
+ +I G I V V+ A RDPE + +P+ +D++ + ++ FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGF 348
Query: 426 GRRICPGMSFGLASVEL 442
G CPG EL
Sbjct: 349 GPHYCPGGMLARLESEL 365
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 34/194 (17%)
Query: 241 HKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDS-FLTTDHIKAVISDIFAAGSETSATT 299
H L+ +T D+ L+ LL + D+D L+ + + A+ + AG ET+
Sbjct: 188 HGYLSDLLERKRTEPDDALLSSLLAVS---DMDGDRLSQEELVAMAMLLLIAGHETTVNL 244
Query: 300 VDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDE-MKFLKLVVKETLRLHPAAPL 358
+ + ++ +P + R++ + ++++E ++F V + +R
Sbjct: 245 IGNGVLALLTHP--------DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRF------ 290
Query: 359 LIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNF 418
+ +G IP V++ A RD ++ EP+ LD + D G F
Sbjct: 291 -----TAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDR------LDITRDASGGVF 339
Query: 419 EYIPFGAGRRICPG 432
FG G C G
Sbjct: 340 ----FGHGIHFCLG 349
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 28/172 (16%)
Query: 278 TDHIKAVIS-DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI 336
+D + A I F G ++ + + A+ +++ P ++R + H ++ +
Sbjct: 219 SDELFATIGVTFFGGGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGV 270
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E+ + L + L PR Q+ + V+V DPE++
Sbjct: 271 EELLRINLSFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
P S +R S ++ FG G+ CPG + G ++ + LL
Sbjct: 321 NPGSIELDRPNPTS---------HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3OM0|A Chain A, Crystal Structure Of The Gluk5 (Ka2) Atd Crystallographic
Dimer At 1.4 Angstrom Resolution
pdb|3OM1|A Chain A, Crystal Structure Of The Gluk5 (Ka2) Atd Dimer At 1.7
Angstrom Resolution
pdb|3OM1|B Chain B, Crystal Structure Of The Gluk5 (Ka2) Atd Dimer At 1.7
Angstrom Resolution
pdb|3QLU|A Chain A, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD DIMER
ASSEMBLY
pdb|3QLU|B Chain B, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD DIMER
ASSEMBLY
pdb|3QLV|A Chain A, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|B Chain B, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|E Chain E, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|G Chain G, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|I Chain I, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
Length = 393
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 367 RCQINGF-DIPVKARVIVNAWAIGRDPEYWT 396
R QING ++P KARV V+ + + RD +Y T
Sbjct: 29 REQINGIIEVPAKARVEVDIFELQRDSQYET 59
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 17/89 (19%)
Query: 364 CGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPF 423
CGQ+ + +++N A DP + EP F P R + ++ F
Sbjct: 350 CGQKIAAGDW-------LMLNYVAANHDPAQFPEPRKFDPTRPANR----------HLAF 392
Query: 424 GAGRRICPGMSFGLASVELPLAMLLYHFD 452
GAG C G+ + + L +LL D
Sbjct: 393 GAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 89/231 (38%), Gaps = 33/231 (14%)
Query: 257 EDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
ED+V L++ G+ L+ D + + AG+ET+ ++ M +NP
Sbjct: 220 EDIVTKLIEADIDGEK---LSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNP----- 271
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPL-LIPRECGQRCQINGFDI 375
+ E++ + + ET+ DE+ + A P+ R + ++ G I
Sbjct: 272 ---DQWELYKK--ERPETAADEI------------VRWATPVSAFQRTALEDVELGGVQI 314
Query: 376 PVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSF 435
RV+++ + D E + +P +F R + V + GT Y R+ + F
Sbjct: 315 KKGQRVVMSYRSANFDEEVFEDPHTFNILRSPNPHVGFGGTGAHYCIGANLARMTINLIF 374
Query: 436 GLASVELP-----LAMLLYHFDWKLPNGIKHEDLDMTEAFGVTVRRKQDLC 481
+ +P A W NGIKH +D T A +V C
Sbjct: 375 NAIADNMPDLKPIGAPERLKSGWL--NGIKHWQVDYTGAGKASVSGAPGTC 423
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 34/194 (17%)
Query: 241 HKKRKATLKNCKTGDDEDLVDVLLKIQGH-GDLDSFLTTDHIKAVISDIFAAGSETSATT 299
H L+ +T D+ L+ LL + GD L+ + + A+ + AG ET+
Sbjct: 188 HGYLSDLLERKRTEPDDALLSSLLAVSDEDGD---RLSQEELVAMAMLLLIAGHETTVNL 244
Query: 300 VDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSIDE-MKFLKLVVKETLRLHPAAPL 358
+ + ++ +P + R++ + ++++E ++F V + +R
Sbjct: 245 IGNGVLALLTHP--------DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRF------ 290
Query: 359 LIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNF 418
+ +G IP V++ A RD ++ EP+ LD + D G F
Sbjct: 291 -----TAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDR------LDITRDASGGVF 339
Query: 419 EYIPFGAGRRICPG 432
FG G C G
Sbjct: 340 ----FGHGIHFCLG 349
>pdb|3S4C|A Chain A, Lactose Phosphorylase In Complex With Sulfate
pdb|3S4D|A Chain A, Lactose Phosphorylase In A Ternary Complex With Cellobiose
And Sulfate
Length = 822
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 17/147 (11%)
Query: 87 VSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSA 146
V +P+ K VV R H ++ + D F++ D W ++LLS
Sbjct: 270 VENPDEEKWADDAKQVVNKERAHALLSRFATSEQTDAAFAALKDYW--------TDLLST 321
Query: 147 KRVQSFQSIREAEVSDLIN-WISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQEAFV 205
V S + ++ ++N W + N++++ GI F + ++D FV
Sbjct: 322 YSVSS----NDEKLDRMVNIWNQYQCMVTFNMSRSASFFETGIGRGMGFRDSNQDLLGFV 377
Query: 206 AVIEETTKV----ISGFNIADVETLHQ 228
+I E + I+ AD HQ
Sbjct: 378 HLIPERARERIIDIASTQFADGSAYHQ 404
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 66/176 (37%), Gaps = 33/176 (18%)
Query: 257 EDLVDVLLKIQGHGDLDSFLTTDHIKAVISDIFAAGSETSATTVDWAMCEMMKNPRVMKK 316
EDL+ ++L G ++ + I + + G ET A+ V A+ ++ +P +
Sbjct: 203 EDLLALMLDAHDRG----LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQL-- 256
Query: 317 AQAEVREVFHRTGKVNETSIDEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIP 376
++ R L V+E LR P+ R+ ++ G +
Sbjct: 257 ------DLLRR----------RPDLLAQAVEECLRYDPSVQSNT-RQLDVDVELRGRRLR 299
Query: 377 VKARVIVNAWAIGRDPEYWTEPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPG 432
V+V A A RDP + P+ F ER + FGAG R C G
Sbjct: 300 RDDVVVVLAGAANRDPRRYDRPDDFDIER----------DPVPSMSFGAGMRYCLG 345
>pdb|3RRS|A Chain A, Crystal Structure Analysis Of Cellobiose Phosphorylase
From Cellulomonas Uda
pdb|3RRS|B Chain B, Crystal Structure Analysis Of Cellobiose Phosphorylase
From Cellulomonas Uda
pdb|3RSY|A Chain A, Cellobiose Phosphorylase From Cellulomonas Uda In Complex
With Sulfate And Glycerol
pdb|3RSY|B Chain B, Cellobiose Phosphorylase From Cellulomonas Uda In Complex
With Sulfate And Glycerol
pdb|3S4A|A Chain A, Cellobiose Phosphorylase From Cellulomonas Uda In Complex
With Cellobiose
pdb|3S4A|B Chain B, Cellobiose Phosphorylase From Cellulomonas Uda In Complex
With Cellobiose
pdb|3S4B|A Chain A, Cellobiose Phosphorylase From Cellulomonas Uda In Complex
With Glucose
pdb|3S4B|B Chain B, Cellobiose Phosphorylase From Cellulomonas Uda In Complex
With Glucose
Length = 822
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 17/147 (11%)
Query: 87 VSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKICVSELLSA 146
V +P+ K VV R H ++ + D F++ D W ++LLS
Sbjct: 270 VENPDEEKWADDAKQVVNKERAHALLSRFATSEQTDAAFAALKDYW--------TDLLST 321
Query: 147 KRVQSFQSIREAEVSDLIN-WISSKAGSVINLTQNVHSLMYGITSRAAFGNRSRDQEAFV 205
V S + ++ ++N W + N++++ GI F + ++D FV
Sbjct: 322 YSVSS----NDEKLDRMVNIWNQYQCMVTFNMSRSASFFETGIGRGMGFRDSNQDLLGFV 377
Query: 206 AVIEETTKV----ISGFNIADVETLHQ 228
+I E + I+ AD HQ
Sbjct: 378 HLIPERARERIIDIASTQFADGSAYHQ 404
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 28/172 (16%)
Query: 278 TDHIKAVIS-DIFAAGSETSATTVDWAMCEMMKNPRVMKKAQAEVREVFHRTGKVNETSI 336
+D + A I F AG ++ + + A+ +++ P ++R + H ++ +
Sbjct: 219 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGV 270
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E+ + L + L PR Q+ + V+V DPE++
Sbjct: 271 EELLRINLSFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAMLL 448
P S +R S ++ G G+ CPG + G ++ + LL
Sbjct: 321 NPGSIELDRPNPTS---------HLAHGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3ERR|A Chain A, Microtubule Binding Domain From Mouse Cytoplasmic Dynein
As A Fusion With Seryl-Trna Synthetase
pdb|3ERR|B Chain B, Microtubule Binding Domain From Mouse Cytoplasmic Dynein
As A Fusion With Seryl-Trna Synthetase
Length = 536
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 79 LGEVPTIIVSSPEVAKEVMKTHDVVFASRPHFPAAQILSYNYRDIIFSSYGDSWKQLRKI 138
L +V ++ + K + K H V S + PAA L+ ++ WKQ+R I
Sbjct: 55 LDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESIALLLGESTTDWKQIRSI 114
Query: 139 CVSE 142
+ E
Sbjct: 115 IMRE 118
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E +LK ++E LR P + R+ +R ++ I V V + RD E +
Sbjct: 236 EENLYLK-AIEEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAM 446
+ E FIP+R + ++ FG+G +C G LA +E +A+
Sbjct: 294 DGEKFIPDRNPN----------PHLSFGSGIHLCLGAP--LARLEARIAI 331
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 337 DEMKFLKLVVKETLRLHPAAPLLIPRECGQRCQINGFDIPVKARVIVNAWAIGRDPEYWT 396
+E +LK ++E LR P + R+ +R ++ I V V + RD E +
Sbjct: 236 EENLYLK-AIEEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 397 EPESFIPERFLDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELPLAM 446
+ E FIP+R + ++ FG+G +C G LA +E +A+
Sbjct: 294 DGEKFIPDRNPN----------PHLSFGSGIHLCLGAP--LARLEARIAI 331
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,126,329
Number of Sequences: 62578
Number of extensions: 579251
Number of successful extensions: 1733
Number of sequences better than 100.0: 160
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 1393
Number of HSP's gapped (non-prelim): 188
length of query: 493
length of database: 14,973,337
effective HSP length: 103
effective length of query: 390
effective length of database: 8,527,803
effective search space: 3325843170
effective search space used: 3325843170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)