BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011098
MEATSAMSRESSTPLVNDGVRNDGFIPQLLTSLPVLDGAASYLAQTTSLITGCFSDYSVE
SPSRDSGGSVVHAQEMETFSSAQTEEHLELSCNSHNSLSESSTPATSSPPIHDGETRGSS
EDPSQRTHALIESSQASPNGISLFKGLIDRARRTVRGSADDIGWLQRDLSMPPVEDGTER
FLEILDNIRHGLHKLPNSMVYLLIPGLFSNHGPLYFVNTKMSFSKQGLACHIAKIHSEAS
VEKNAKEIKEYIEEIYWGSKKRVLLLGHSKGGVDAAAALSLYWPDLKDKVAGLALAQSPY
GGSPIATDILREGQLGDYVNLRKLMEILICKVIKGDLQALEDLTYERRMDFLRKHQLPRE
LPVVSLHTEAGITSAVLATLSHVAHAELPSLSADEPSKLPVVMPLGAAMAACAQLLQLRY
GEKSDGLVTCRDAVVPGSIVVRPKRKLDHAWMVYSSLNDDTSEADASQVCEALLTLLVEV
GLRKRHELAMKDE

High Scoring Gene Products

Symbol, full name Information P value
PSPTO_2821
Uncharacterized protein
protein from Pseudomonas syringae pv. tomato str. DC3000 0.00013

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011098
        (493 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2054977 - symbol:AT2G44970 species:3702 "Arabi...  1487  2.0e-152  1
UNIPROTKB|Q881R2 - symbol:PSPTO_2821 "Uncharacterized pro...   121  0.00013   1


>TAIR|locus:2054977 [details] [associations]
            symbol:AT2G44970 species:3702 "Arabidopsis thaliana"
            [GO:0006505 "GPI anchor metabolic process" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0016788 "hydrolase activity, acting on ester bonds"
            evidence=IEA] [GO:0031227 "intrinsic to endoplasmic reticulum
            membrane" evidence=IEA] EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0016787 EMBL:BT001943 IPI:IPI00548038 RefSeq:NP_850428.1
            UniGene:At.28043 ProteinModelPortal:Q84WV5 IntAct:Q84WV5
            PRIDE:Q84WV5 EnsemblPlants:AT2G44970.1 GeneID:819105
            KEGG:ath:AT2G44970 HOGENOM:HOG000077414 InParanoid:Q84WV5
            OMA:MAACAQL ProtClustDB:CLSN2680251 Genevestigator:Q84WV5
            Uniprot:Q84WV5
        Length = 503

 Score = 1487 (528.5 bits), Expect = 2.0e-152, P = 2.0e-152
 Identities = 303/490 (61%), Positives = 356/490 (72%)

Query:     2 EATSAMSRESSTPLVNDGVRNDGFIPQLLTSLPVLDGAASYLAQTTSLITGCFSDYSVES 61
             EA  +   ES TPLV  G  ++   PQ+  SLP L+ AASY+ Q TS +  CFSDYSVE 
Sbjct:    19 EAGQSRDGESVTPLVGGGNGDNAVAPQVFNSLPALNEAASYITQATSYLGSCFSDYSVEY 78

Query:    62 PSRDSGGSVVHAQEMETFSSAQTEEXXXXXXXXXXXXXXXXXXXXXXXXIHDGETRGSSE 121
               +D+   + H  E+    S    +                          +  +R S+E
Sbjct:    79 GGKDT---ISHPHEL--LRSTSGVDGNSPVSVCISPGERFSTSSEASTSDANSPSRESTE 133

Query:   122 DPSQRTHALIESSQASPNGISLFKGLIDRARRTVRGSADDIGWLQRDLSMPPVEDGTERF 181
                Q T+A++ S++ + NGIS+F+GLI+RARRTVRGSADDIGWLQR   MPPVEDGT+RF
Sbjct:   134 ILPQATNAIVTSNRLNLNGISMFQGLIERARRTVRGSADDIGWLQRAPEMPPVEDGTDRF 193

Query:   182 LEILDNIRHGLHKLPNSMVYLLIPGLFSNHGPLYFVNTKMSFSKQGLACHIAKIHSEASV 241
              +IL++I HG+H+LPN++VYLL+PGLFSNHGPLYFV+TK  FSK GLACHIAKIHSE+SV
Sbjct:   194 NKILEDIGHGVHRLPNTVVYLLVPGLFSNHGPLYFVDTKTKFSKMGLACHIAKIHSESSV 253

Query:   242 EKNAXXXXXXXXXXXWGSKKRVLLLGHSKGGVDAAAALSLYWPDLKDKVAGLALAQSPYG 301
             EKNA           WGS KRVLLLGHSKGG+DAAAALSLYWP+LKDKVAGL LAQSPYG
Sbjct:   254 EKNAREIKEYIEELCWGSNKRVLLLGHSKGGIDAAAALSLYWPELKDKVAGLVLAQSPYG 313

Query:   302 GSPIATDILREGQLGDYVNLRKLMEILICKVIKGDLQALEDLTYERRMDFLRKHQLPREL 361
             GSPIATDILREGQLGDYVNLRK+MEILI KVIKGD+QALEDLTYERR +FL+ H LPREL
Sbjct:   314 GSPIATDILREGQLGDYVNLRKMMEILISKVIKGDIQALEDLTYERRKEFLKNHPLPREL 373

Query:   362 PVVSLHTEAGITSAVLATLSHVAHAELPSLSADEPSKLPVVMPXXXXXXXXXXXXXXRYG 421
             P VS  TEA I+ AVL+TLSHVAHAELP    ++ +KLPVVMP              RYG
Sbjct:   374 PTVSFRTEASISPAVLSTLSHVAHAELPL--TNQAAKLPVVMPLGAAMAACAQLLQVRYG 431

Query:   422 EKSDGLVTCRDAVVPGSIVVRPKRKLDHAWMVYSSLNDDTSEADASQVCEALLTLLVEVG 481
             EKSDGLVTC DA VPGS+VVRPKRKLDHAWMVYSSLN+   EADA+QVCEALLTLLV+V 
Sbjct:   432 EKSDGLVTCCDAEVPGSVVVRPKRKLDHAWMVYSSLNEVPLEADAAQVCEALLTLLVQVE 491

Query:   482 LRKRHELAMK 491
               ++ +LA K
Sbjct:   492 QERQQKLATK 501


>UNIPROTKB|Q881R2 [details] [associations]
            symbol:PSPTO_2821 "Uncharacterized protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE016853 GenomeReviews:AE016853_GR RefSeq:NP_792625.1
            DNASU:1184475 GeneID:1184475 KEGG:pst:PSPTO_2821 PATRIC:19996994
            eggNOG:bactNOG90424 HOGENOM:HOG000051133 OMA:CDGIALV
            ProtClustDB:CLSK306901 BioCyc:PSYR223283:GJIX-2868-MONOMER
            Uniprot:Q881R2
        Length = 302

 Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
 Identities = 44/144 (30%), Positives = 65/144 (45%)

Query:   172 PPVE-DGTERFLEILDNIRHGLHKLPNSMVYLLIPGLFSNHGPLYFVNTKMSFSKQGLAC 230
             PP   D TE FL+     R GL   P   + +L+ GL+S    + + N   + S +    
Sbjct:    25 PPAALDWTELFLQRWRTPRLGL---PKDTLVVLVAGLYSEF--ILYCNRACARSLKSEGY 79

Query:   231 HIAKIHSEASVEKNAXXXXXXXXXXXWGSK----KRVLLLGHSKGGVDAAAALSLYWPDL 286
              + ++   +S                 GS+    +R ++L HSKG +D  AAL+   P L
Sbjct:    80 EVLRMPVRSS---RGIIAQGEHIATVLGSRLKPGQRFVVLAHSKGSLDTLAALTQP-PAL 135

Query:   287 KDKVAGLALAQSPYGGSPIATDIL 310
              D   G+AL Q P G SPI  D+L
Sbjct:   136 LDACDGIALVQPPVGPSPIIDDVL 159


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      493       444   0.00090  118 3  11 22  0.43    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  246 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.70u 0.10s 32.80t   Elapsed:  00:00:02
  Total cpu time:  32.70u 0.10s 32.80t   Elapsed:  00:00:02
  Start:  Mon May 20 18:54:31 2013   End:  Mon May 20 18:54:33 2013

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