Query 011099
Match_columns 493
No_of_seqs 176 out of 1429
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 20:47:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011099.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011099hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.6E-70 5.6E-75 552.2 37.1 433 5-480 13-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 4E-67 1.4E-71 536.5 44.3 461 1-481 1-469 (480)
3 2acv_A Triterpene UDP-glucosyl 100.0 2E-62 6.9E-67 499.8 37.4 434 5-480 9-462 (463)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.9E-62 6.3E-67 503.6 35.1 441 5-481 8-479 (482)
5 2c1x_A UDP-glucose flavonoid 3 100.0 3.6E-62 1.2E-66 496.6 35.9 437 4-481 6-452 (456)
6 4amg_A Snogd; transferase, pol 100.0 3.5E-45 1.2E-49 367.7 20.1 367 4-479 21-398 (400)
7 2iya_A OLEI, oleandomycin glyc 100.0 3.3E-43 1.1E-47 356.1 31.3 378 5-460 12-405 (424)
8 1iir_A Glycosyltransferase GTF 100.0 3.1E-41 1E-45 340.6 27.0 380 6-480 1-399 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 3.7E-40 1.3E-44 332.9 25.1 366 6-459 1-384 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.3E-39 4.6E-44 327.2 24.4 348 6-457 1-364 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 6.2E-38 2.1E-42 316.5 31.3 374 5-477 20-410 (415)
12 2yjn_A ERYCIII, glycosyltransf 100.0 1.4E-37 4.8E-42 316.4 27.6 374 5-481 20-435 (441)
13 3ia7_A CALG4; glycosysltransfe 100.0 6.3E-37 2.2E-41 307.6 30.2 378 6-478 5-396 (402)
14 2p6p_A Glycosyl transferase; X 100.0 1.6E-35 5.6E-40 295.7 31.1 353 6-480 1-378 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.8E-35 6.3E-40 299.9 31.5 362 5-460 7-383 (430)
16 3oti_A CALG3; calicheamicin, T 100.0 4.6E-34 1.6E-38 286.5 26.2 350 5-479 20-395 (398)
17 4fzr_A SSFS6; structural genom 100.0 5.8E-35 2E-39 293.1 18.5 343 5-460 15-384 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.7E-33 1.9E-37 277.9 21.6 356 5-479 1-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4E-30 1.4E-34 259.0 30.0 353 4-460 19-392 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 6.4E-28 2.2E-32 238.3 24.7 310 7-443 4-326 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 4.9E-27 1.7E-31 206.3 13.6 162 256-459 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 3.2E-18 1.1E-22 168.8 26.5 338 5-481 6-356 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 1.2E-15 4E-20 137.4 8.1 149 268-438 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 9.7E-13 3.3E-17 123.4 17.8 116 269-417 156-273 (282)
25 1v4v_A UDP-N-acetylglucosamine 99.3 1.2E-10 4.2E-15 114.9 16.9 79 349-443 255-336 (376)
26 1vgv_A UDP-N-acetylglucosamine 99.2 2.2E-10 7.7E-15 113.3 14.5 79 349-443 263-344 (384)
27 3okp_A GDP-mannose-dependent a 99.2 1.9E-08 6.5E-13 99.5 27.1 348 4-483 3-380 (394)
28 3c48_A Predicted glycosyltrans 99.1 3.3E-08 1.1E-12 99.4 27.1 95 349-457 306-408 (438)
29 3ot5_A UDP-N-acetylglucosamine 99.1 1.4E-09 4.9E-14 108.1 16.4 317 5-443 27-363 (403)
30 3dzc_A UDP-N-acetylglucosamine 99.1 8.8E-10 3E-14 109.5 13.1 321 6-443 26-369 (396)
31 3fro_A GLGA glycogen synthase; 99.0 2.3E-07 7.8E-12 93.0 28.5 111 349-482 311-430 (439)
32 2gek_A Phosphatidylinositol ma 99.0 1.2E-07 4.2E-12 94.1 26.0 81 349-443 263-351 (406)
33 3beo_A UDP-N-acetylglucosamine 99.0 1.5E-08 5.2E-13 99.6 16.9 79 349-443 263-344 (375)
34 2jjm_A Glycosyl transferase, g 99.0 7.8E-07 2.7E-11 88.0 29.3 80 350-443 268-352 (394)
35 2r60_A Glycosyl transferase, g 98.9 3.9E-07 1.3E-11 93.3 25.0 81 349-443 335-426 (499)
36 2iuy_A Avigt4, glycosyltransfe 98.8 3.9E-07 1.3E-11 88.3 19.9 125 273-440 164-307 (342)
37 2iw1_A Lipopolysaccharide core 98.8 1.3E-05 4.3E-10 78.4 30.1 93 349-454 253-351 (374)
38 4hwg_A UDP-N-acetylglucosamine 98.7 1.4E-07 4.7E-12 93.0 14.9 314 9-443 12-344 (385)
39 2x6q_A Trehalose-synthase TRET 98.5 3.5E-05 1.2E-09 76.5 26.3 79 349-443 293-381 (416)
40 2vsy_A XCC0866; transferase, g 98.2 0.00041 1.4E-08 71.9 26.5 84 349-443 434-524 (568)
41 3s28_A Sucrose synthase 1; gly 98.2 6.5E-05 2.2E-09 80.5 20.2 81 349-443 640-736 (816)
42 2f9f_A First mannosyl transfer 98.0 2.9E-05 9.9E-10 67.4 11.0 80 349-443 78-164 (177)
43 3oy2_A Glycosyltransferase B73 98.0 0.0008 2.7E-08 66.5 22.1 109 351-481 256-389 (413)
44 1rzu_A Glycogen synthase 1; gl 98.0 0.00073 2.5E-08 68.5 21.6 80 349-443 346-445 (485)
45 2qzs_A Glycogen synthase; glyc 97.9 0.0025 8.7E-08 64.4 23.9 81 349-443 347-446 (485)
46 2xci_A KDO-transferase, 3-deox 97.8 0.0024 8.3E-08 62.3 21.7 95 351-457 262-362 (374)
47 2hy7_A Glucuronosyltransferase 97.8 0.0018 6.2E-08 64.0 20.1 76 350-443 266-354 (406)
48 3qhp_A Type 1 capsular polysac 97.3 0.0027 9.2E-08 53.8 11.7 89 350-454 57-154 (166)
49 3q3e_A HMW1C-like glycosyltran 97.2 0.0032 1.1E-07 64.5 12.9 137 270-443 440-590 (631)
50 2bfw_A GLGA glycogen synthase; 97.0 0.012 4.1E-07 51.4 13.5 79 350-443 96-183 (200)
51 3tov_A Glycosyl transferase fa 96.9 0.03 1E-06 53.9 16.7 106 4-134 7-115 (349)
52 3rhz_A GTF3, nucleotide sugar 96.9 0.002 6.9E-08 61.8 7.6 108 350-476 215-334 (339)
53 4gyw_A UDP-N-acetylglucosamine 96.7 0.019 6.3E-07 61.1 14.5 102 269-394 521-629 (723)
54 1psw_A ADP-heptose LPS heptosy 96.4 0.088 3E-06 50.4 15.7 103 6-134 1-106 (348)
55 2x0d_A WSAF; GT4 family, trans 92.6 0.59 2E-05 45.9 10.4 79 350-443 296-381 (413)
56 3dfz_A SIRC, precorrin-2 dehyd 88.8 3.4 0.00012 36.5 10.6 156 263-461 26-186 (223)
57 3vue_A GBSS-I, granule-bound s 87.1 0.36 1.2E-05 49.2 3.6 119 350-482 383-511 (536)
58 3vue_A GBSS-I, granule-bound s 86.9 2.5 8.5E-05 43.0 9.8 37 5-44 9-53 (536)
59 3vot_A L-amino acid ligase, BL 85.3 3.5 0.00012 40.3 9.7 99 1-132 1-101 (425)
60 3fgn_A Dethiobiotin synthetase 84.1 6.6 0.00023 35.3 10.2 124 4-139 24-167 (251)
61 2wqk_A 5'-nucleotidase SURE; S 84.0 4.6 0.00016 36.3 8.9 112 7-138 3-128 (251)
62 1j9j_A Stationary phase surviV 83.5 8.7 0.0003 34.3 10.4 40 6-48 1-40 (247)
63 2e6c_A 5'-nucleotidase SURE; S 83.1 9.3 0.00032 34.1 10.4 113 6-137 1-129 (244)
64 2phj_A 5'-nucleotidase SURE; S 82.9 13 0.00043 33.3 11.2 39 6-47 2-40 (251)
65 2v4n_A Multifunctional protein 80.1 9.9 0.00034 34.1 9.5 40 6-48 2-41 (254)
66 1l5x_A SurviVal protein E; str 79.7 11 0.00039 34.3 9.9 39 6-47 1-39 (280)
67 2x0d_A WSAF; GT4 family, trans 77.4 1.3 4.4E-05 43.4 3.2 40 4-44 45-89 (413)
68 1g5t_A COB(I)alamin adenosyltr 76.7 21 0.0007 30.7 10.2 101 6-119 29-131 (196)
69 3ty2_A 5'-nucleotidase SURE; s 76.4 8.5 0.00029 34.6 7.9 40 5-47 11-50 (261)
70 3tqr_A Phosphoribosylglycinami 76.4 13 0.00045 32.4 9.0 112 1-138 1-114 (215)
71 3bfv_A CAPA1, CAPB2, membrane 67.2 31 0.0011 31.1 9.8 40 4-44 80-121 (271)
72 3lqk_A Dipicolinate synthase s 65.8 7.9 0.00027 33.5 5.1 43 1-45 3-46 (201)
73 4dzz_A Plasmid partitioning pr 65.4 37 0.0013 28.6 9.7 37 7-44 2-40 (206)
74 1ccw_A Protein (glutamate muta 64.5 10 0.00034 30.4 5.2 43 5-48 3-45 (137)
75 2q5c_A NTRC family transcripti 63.4 22 0.00075 30.4 7.6 42 97-141 130-172 (196)
76 3of5_A Dethiobiotin synthetase 63.3 19 0.00066 31.6 7.3 129 5-139 3-150 (228)
77 3nb0_A Glycogen [starch] synth 62.8 13 0.00043 38.7 6.7 44 351-396 495-551 (725)
78 3zqu_A Probable aromatic acid 61.7 9.6 0.00033 33.1 4.9 42 1-45 1-42 (209)
79 3bgw_A DNAB-like replicative h 61.5 17 0.00057 35.8 7.2 46 6-52 198-243 (444)
80 1pjq_A CYSG, siroheme synthase 60.8 1.3E+02 0.0044 29.4 13.7 90 361-461 68-168 (457)
81 1uqt_A Alpha, alpha-trehalose- 60.3 47 0.0016 32.9 10.4 107 353-482 336-454 (482)
82 3cio_A ETK, tyrosine-protein k 59.7 42 0.0014 30.8 9.3 39 5-44 103-143 (299)
83 3t5t_A Putative glycosyltransf 59.5 37 0.0013 33.8 9.3 119 351-490 354-481 (496)
84 3mcu_A Dipicolinate synthase, 58.7 9.7 0.00033 33.0 4.3 42 1-44 1-43 (207)
85 3qxc_A Dethiobiotin synthetase 58.0 28 0.00094 31.0 7.4 44 95-138 118-170 (242)
86 2gt1_A Lipopolysaccharide hept 57.6 7.2 0.00025 36.4 3.7 42 6-47 1-43 (326)
87 2yxb_A Coenzyme B12-dependent 56.3 8.4 0.00029 31.9 3.5 52 4-56 17-68 (161)
88 2ywr_A Phosphoribosylglycinami 56.0 72 0.0025 27.6 9.7 107 6-138 2-111 (216)
89 3goc_A Endonuclease V; alpha-b 55.1 18 0.00061 31.9 5.4 42 95-136 94-142 (237)
90 3u7q_A Nitrogenase molybdenum- 54.1 61 0.0021 32.2 10.0 93 6-135 349-441 (492)
91 3la6_A Tyrosine-protein kinase 54.0 62 0.0021 29.4 9.4 40 5-45 91-132 (286)
92 2i2x_B MTAC, methyltransferase 53.2 22 0.00077 31.9 6.1 48 4-52 122-169 (258)
93 3auf_A Glycinamide ribonucleot 52.3 1.2E+02 0.0041 26.5 11.6 109 5-138 22-132 (229)
94 3pdi_A Nitrogenase MOFE cofact 51.7 44 0.0015 33.1 8.5 93 6-135 333-425 (483)
95 1kjq_A GART 2, phosphoribosylg 50.2 1.7E+02 0.0057 27.6 12.5 38 1-44 7-44 (391)
96 1y80_A Predicted cobalamin bin 49.4 19 0.00064 31.2 4.8 40 5-45 88-127 (210)
97 1qzu_A Hypothetical protein MD 49.2 13 0.00045 32.2 3.7 41 3-45 17-58 (206)
98 2w36_A Endonuclease V; hypoxan 49.0 23 0.00079 31.0 5.1 42 95-136 90-138 (225)
99 3bh0_A DNAB-like replicative h 48.5 38 0.0013 31.4 7.0 44 7-51 70-113 (315)
100 3q0i_A Methionyl-tRNA formyltr 48.0 15 0.00051 34.3 4.1 35 4-44 6-40 (318)
101 3u7q_B Nitrogenase molybdenum- 47.3 1.5E+02 0.0053 29.5 11.7 95 6-135 365-469 (523)
102 3qjg_A Epidermin biosynthesis 47.3 19 0.00064 30.3 4.2 42 6-49 6-47 (175)
103 1jkx_A GART;, phosphoribosylgl 46.5 1.4E+02 0.0048 25.7 11.4 108 6-138 1-110 (212)
104 3dfu_A Uncharacterized protein 46.5 14 0.00047 32.8 3.4 36 1-42 2-37 (232)
105 3ga2_A Endonuclease V; alpha-b 46.5 22 0.00076 31.5 4.6 41 96-136 97-144 (246)
106 1mvl_A PPC decarboxylase athal 46.0 22 0.00074 30.9 4.5 41 5-48 19-59 (209)
107 1qgu_B Protein (nitrogenase mo 44.6 1.6E+02 0.0054 29.4 11.3 95 6-135 361-465 (519)
108 3qvl_A Putative hydantoin race 44.5 1.6E+02 0.0055 25.9 10.2 37 6-43 2-39 (245)
109 3ezx_A MMCP 1, monomethylamine 44.4 23 0.0008 30.8 4.6 51 5-56 92-142 (215)
110 1id1_A Putative potassium chan 44.3 18 0.00063 29.2 3.7 33 5-43 3-35 (153)
111 3tqr_A Phosphoribosylglycinami 44.0 93 0.0032 26.9 8.3 102 289-438 73-176 (215)
112 3pnx_A Putative sulfurtransfer 43.6 22 0.00074 29.4 4.0 43 1-45 2-44 (160)
113 4ds3_A Phosphoribosylglycinami 43.6 76 0.0026 27.4 7.7 102 289-438 76-179 (209)
114 3nrb_A Formyltetrahydrofolate 43.1 83 0.0028 28.7 8.2 103 289-439 155-259 (287)
115 3lrx_A Putative hydrogenase; a 42.8 18 0.00062 29.6 3.4 36 6-45 24-59 (158)
116 4dim_A Phosphoribosylglycinami 42.7 1.2E+02 0.0043 28.7 10.1 33 5-43 7-39 (403)
117 3kcq_A Phosphoribosylglycinami 42.4 1E+02 0.0034 26.7 8.3 102 289-438 72-175 (215)
118 3av3_A Phosphoribosylglycinami 42.3 1.3E+02 0.0045 25.9 9.1 102 289-438 72-175 (212)
119 3p9x_A Phosphoribosylglycinami 42.2 1E+02 0.0034 26.7 8.2 102 289-438 71-174 (211)
120 1meo_A Phosophoribosylglycinam 41.3 1.5E+02 0.0052 25.4 9.3 102 289-438 69-172 (209)
121 3auf_A Glycinamide ribonucleot 40.9 1.8E+02 0.0062 25.3 9.9 102 289-438 91-194 (229)
122 3da8_A Probable 5'-phosphoribo 40.7 1.8E+02 0.0061 25.1 10.6 103 288-438 78-182 (215)
123 2iz6_A Molybdenum cofactor car 39.9 1.4E+02 0.0046 24.9 8.4 43 354-396 94-140 (176)
124 2b8t_A Thymidine kinase; deoxy 39.6 1.4E+02 0.0047 25.9 8.9 36 8-44 15-50 (223)
125 4egb_A DTDP-glucose 4,6-dehydr 39.6 1.5E+02 0.005 27.2 9.8 34 4-42 23-58 (346)
126 3o1l_A Formyltetrahydrofolate 39.1 1.3E+02 0.0045 27.6 8.9 105 286-438 168-274 (302)
127 4ds3_A Phosphoribosylglycinami 38.5 1.6E+02 0.0056 25.2 9.0 108 5-138 7-117 (209)
128 3l49_A ABC sugar (ribose) tran 38.4 2.1E+02 0.0071 25.2 11.2 41 1-42 1-43 (291)
129 1jkx_A GART;, phosphoribosylgl 38.0 1.5E+02 0.0052 25.5 8.8 102 289-438 69-172 (212)
130 3av3_A Phosphoribosylglycinami 37.8 1.9E+02 0.0066 24.7 10.6 108 6-138 4-113 (212)
131 4b4o_A Epimerase family protei 37.7 29 0.00099 31.5 4.4 33 6-43 1-33 (298)
132 3hr8_A Protein RECA; alpha and 37.5 2.4E+02 0.0081 26.5 10.7 41 7-48 63-103 (356)
133 3obi_A Formyltetrahydrofolate 37.4 90 0.0031 28.5 7.5 103 289-439 156-260 (288)
134 3kcq_A Phosphoribosylglycinami 37.0 1.5E+02 0.0051 25.6 8.5 103 5-138 8-113 (215)
135 2g1u_A Hypothetical protein TM 36.9 31 0.0011 27.8 4.0 33 5-43 19-51 (155)
136 1g63_A Epidermin modifying enz 36.6 33 0.0011 29.0 4.1 44 7-52 4-47 (181)
137 2gt1_A Lipopolysaccharide hept 36.4 26 0.00089 32.4 3.9 136 269-441 177-322 (326)
138 2q6t_A DNAB replication FORK h 35.8 28 0.00095 34.1 4.1 44 7-51 202-246 (444)
139 3n0v_A Formyltetrahydrofolate 35.3 91 0.0031 28.4 7.2 103 289-439 156-260 (286)
140 2ywr_A Phosphoribosylglycinami 35.3 1.7E+02 0.0059 25.1 8.7 102 289-438 70-173 (216)
141 3lou_A Formyltetrahydrofolate 35.1 81 0.0028 28.8 6.8 102 289-438 161-264 (292)
142 1fmt_A Methionyl-tRNA FMet for 34.9 36 0.0012 31.6 4.5 34 4-43 2-35 (314)
143 2lnd_A De novo designed protei 34.8 26 0.00087 24.7 2.5 49 386-440 50-100 (112)
144 3k96_A Glycerol-3-phosphate de 34.6 25 0.00085 33.4 3.4 37 1-43 25-61 (356)
145 1mio_B Nitrogenase molybdenum 34.6 1.7E+02 0.0059 28.5 9.7 34 97-135 376-409 (458)
146 2zts_A Putative uncharacterize 34.3 2E+02 0.0068 24.6 9.4 127 6-137 31-180 (251)
147 2bw0_A 10-FTHFDH, 10-formyltet 34.0 1E+02 0.0036 28.6 7.5 82 1-118 20-109 (329)
148 1lss_A TRK system potassium up 33.7 37 0.0013 26.4 3.9 33 5-43 4-36 (140)
149 3tqq_A Methionyl-tRNA formyltr 33.5 32 0.0011 32.0 3.8 34 5-44 2-35 (314)
150 3l7i_A Teichoic acid biosynthe 33.0 57 0.0019 34.2 6.2 115 352-480 602-719 (729)
151 3da8_A Probable 5'-phosphoribo 33.0 1.6E+02 0.0055 25.4 8.0 106 5-137 12-119 (215)
152 3mc3_A DSRE/DSRF-like family p 32.9 59 0.002 25.6 4.9 29 15-44 28-56 (134)
153 2r8r_A Sensor protein; KDPD, P 32.5 55 0.0019 28.7 4.9 39 5-44 6-44 (228)
154 2ejb_A Probable aromatic acid 32.2 59 0.002 27.6 5.0 42 6-49 2-43 (189)
155 1meo_A Phosophoribosylglycinam 31.7 2.4E+02 0.0084 24.1 11.5 108 6-138 1-110 (209)
156 2llh_A Nucleophosmin; nucleola 37.7 10 0.00034 26.4 0.0 41 450-490 23-63 (74)
157 3pdi_B Nitrogenase MOFE cofact 31.3 46 0.0016 32.8 4.8 86 6-135 314-399 (458)
158 1sbz_A Probable aromatic acid 31.1 63 0.0021 27.6 5.0 40 6-46 1-40 (197)
159 3rfo_A Methionyl-tRNA formyltr 31.0 49 0.0017 30.7 4.6 112 2-138 1-113 (317)
160 4hcj_A THIJ/PFPI domain protei 30.3 41 0.0014 28.1 3.7 42 1-44 4-45 (177)
161 1xp8_A RECA protein, recombina 30.3 2.3E+02 0.008 26.6 9.4 41 7-48 76-116 (366)
162 4g6h_A Rotenone-insensitive NA 30.0 26 0.00089 35.0 2.8 34 5-44 42-75 (502)
163 3ih5_A Electron transfer flavo 30.0 1.4E+02 0.0049 25.7 7.3 109 8-135 6-121 (217)
164 1q1v_A DEK protein; winged-hel 30.0 1.2E+02 0.004 21.0 5.3 53 424-478 10-64 (70)
165 3eag_A UDP-N-acetylmuramate:L- 29.7 51 0.0017 30.6 4.6 35 4-43 3-37 (326)
166 4hb9_A Similarities with proba 29.6 34 0.0011 32.5 3.5 29 6-40 2-30 (412)
167 3ahc_A Phosphoketolase, xylulo 29.5 1.9E+02 0.0066 30.7 9.3 44 424-467 770-813 (845)
168 1qkk_A DCTD, C4-dicarboxylate 29.5 1.1E+02 0.0036 24.1 6.1 49 386-442 74-122 (155)
169 2pju_A Propionate catabolism o 29.3 34 0.0012 30.0 3.0 39 96-137 141-180 (225)
170 3hn2_A 2-dehydropantoate 2-red 28.4 41 0.0014 31.0 3.7 33 6-44 3-35 (312)
171 2r6a_A DNAB helicase, replicat 28.2 69 0.0024 31.3 5.5 44 6-50 204-248 (454)
172 2vou_A 2,6-dihydroxypyridine h 27.6 46 0.0016 31.7 4.1 36 1-42 1-36 (397)
173 1wrd_A TOM1, target of MYB pro 27.3 1E+02 0.0036 23.0 5.1 49 426-481 3-54 (103)
174 2l82_A Designed protein OR32; 27.1 1.3E+02 0.0043 22.5 5.3 34 272-309 3-36 (162)
175 1p3y_1 MRSD protein; flavoprot 27.0 53 0.0018 28.0 3.8 40 5-46 8-47 (194)
176 1xmp_A PURE, phosphoribosylami 27.0 2.7E+02 0.0091 23.0 7.8 147 270-464 11-165 (170)
177 1o97_C Electron transferring f 26.8 94 0.0032 27.9 5.7 41 96-138 102-148 (264)
178 3g1w_A Sugar ABC transporter; 26.3 3.4E+02 0.012 24.0 10.8 37 97-136 53-93 (305)
179 3llv_A Exopolyphosphatase-rela 26.3 40 0.0014 26.5 2.8 32 6-43 7-38 (141)
180 3i83_A 2-dehydropantoate 2-red 25.9 41 0.0014 31.1 3.3 40 6-52 3-42 (320)
181 3fwz_A Inner membrane protein 25.8 39 0.0013 26.7 2.7 34 5-44 7-40 (140)
182 2r85_A PURP protein PF1517; AT 25.7 56 0.0019 30.1 4.1 33 5-44 2-34 (334)
183 2vqe_B 30S ribosomal protein S 25.6 65 0.0022 28.8 4.2 34 106-139 156-191 (256)
184 3lyu_A Putative hydrogenase; t 25.4 65 0.0022 25.6 3.9 35 6-44 19-53 (142)
185 2i2c_A Probable inorganic poly 25.4 34 0.0012 30.9 2.5 50 370-441 38-93 (272)
186 2qs7_A Uncharacterized protein 25.2 80 0.0027 25.2 4.5 36 8-44 11-46 (144)
187 1y56_B Sarcosine oxidase; dehy 25.1 41 0.0014 31.7 3.2 38 1-44 1-38 (382)
188 1p9o_A Phosphopantothenoylcyst 24.9 55 0.0019 30.3 3.8 23 21-44 67-89 (313)
189 3g0o_A 3-hydroxyisobutyrate de 24.9 39 0.0013 31.0 2.8 34 4-43 6-39 (303)
190 3u3x_A Oxidoreductase; structu 24.4 3.9E+02 0.013 24.8 9.9 63 355-417 76-145 (361)
191 1u94_A RECA protein, recombina 24.4 4.2E+02 0.014 24.7 10.0 42 6-48 64-105 (356)
192 3e2i_A Thymidine kinase; Zn-bi 24.3 2.1E+02 0.0071 24.8 7.1 37 7-44 29-66 (219)
193 1efp_B ETF, protein (electron 23.7 1.2E+02 0.0042 26.9 5.7 39 97-137 104-148 (252)
194 3e9m_A Oxidoreductase, GFO/IDH 23.6 2.8E+02 0.0095 25.4 8.6 130 271-443 7-144 (330)
195 1fmt_A Methionyl-tRNA FMet for 23.5 2.7E+02 0.0093 25.5 8.3 101 290-438 72-174 (314)
196 3kjh_A CO dehydrogenase/acetyl 23.5 57 0.002 28.4 3.6 38 6-44 1-38 (254)
197 2an1_A Putative kinase; struct 23.4 44 0.0015 30.4 2.9 30 364-395 62-95 (292)
198 2etv_A Iron(III) ABC transport 23.2 69 0.0024 29.9 4.3 37 97-136 88-125 (346)
199 1efv_B Electron transfer flavo 23.0 1.2E+02 0.0042 26.9 5.6 39 97-137 107-151 (255)
200 2hy5_A Putative sulfurtransfer 23.0 1.4E+02 0.0049 23.1 5.5 27 17-44 15-42 (130)
201 3lay_A Zinc resistance-associa 22.8 2.3E+02 0.008 23.5 6.9 57 426-483 68-126 (175)
202 1pno_A NAD(P) transhydrogenase 22.8 81 0.0028 26.0 3.8 36 6-44 24-64 (180)
203 3qjg_A Epidermin biosynthesis 22.7 3E+02 0.01 22.8 7.6 112 271-413 7-142 (175)
204 4ep4_A Crossover junction endo 22.6 1.6E+02 0.0054 24.3 5.8 48 89-138 46-108 (166)
205 1d4o_A NADP(H) transhydrogenas 22.4 83 0.0028 26.0 3.8 36 6-44 23-63 (184)
206 1c0p_A D-amino acid oxidase; a 22.2 72 0.0025 29.8 4.2 37 1-43 2-38 (363)
207 4gi5_A Quinone reductase; prot 22.1 1.3E+02 0.0045 27.2 5.7 38 4-42 21-61 (280)
208 1wcv_1 SOJ, segregation protei 22.0 67 0.0023 28.4 3.8 43 1-44 1-45 (257)
209 1u0t_A Inorganic polyphosphate 22.0 39 0.0013 31.2 2.2 31 363-395 73-107 (307)
210 1kjn_A MTH0777; hypotethical p 21.9 1.2E+02 0.0041 24.5 4.6 39 5-44 6-46 (157)
211 4hn9_A Iron complex transport 21.8 79 0.0027 29.3 4.4 30 108-137 116-145 (335)
212 2qh9_A UPF0215 protein AF_1433 21.8 1.4E+02 0.0047 25.1 5.4 40 97-136 51-98 (184)
213 1xgk_A Nitrogen metabolite rep 21.4 80 0.0027 29.5 4.3 38 1-43 1-38 (352)
214 4e5s_A MCCFLIKE protein (BA_56 21.2 2.2E+02 0.0074 26.4 7.2 28 283-310 62-89 (331)
215 3md9_A Hemin-binding periplasm 21.2 1E+02 0.0035 27.0 4.8 36 98-136 52-89 (255)
216 3ouz_A Biotin carboxylase; str 21.2 2E+02 0.0068 27.8 7.3 31 7-43 8-38 (446)
217 1yt5_A Inorganic polyphosphate 21.1 40 0.0014 30.2 2.0 54 365-442 41-97 (258)
218 4gbj_A 6-phosphogluconate dehy 21.0 69 0.0024 29.3 3.7 29 7-41 7-35 (297)
219 2r6j_A Eugenol synthase 1; phe 21.0 90 0.0031 28.4 4.5 33 7-44 13-45 (318)
220 1f0y_A HCDH, L-3-hydroxyacyl-C 20.9 61 0.0021 29.6 3.3 37 1-43 11-47 (302)
221 3tqq_A Methionyl-tRNA formyltr 20.6 3.3E+02 0.011 25.0 8.2 101 290-438 71-173 (314)
222 1hdo_A Biliverdin IX beta redu 20.6 1.2E+02 0.0041 25.1 5.0 33 6-43 4-36 (206)
223 2gk4_A Conserved hypothetical 20.6 68 0.0023 28.2 3.3 26 16-44 28-53 (232)
224 3q0i_A Methionyl-tRNA formyltr 20.5 4.3E+02 0.015 24.3 9.0 101 290-438 76-178 (318)
225 2fsv_C NAD(P) transhydrogenase 20.5 93 0.0032 26.2 3.8 36 6-44 47-87 (203)
226 3bul_A Methionine synthase; tr 20.2 98 0.0033 31.4 4.8 46 5-51 98-143 (579)
227 1q57_A DNA primase/helicase; d 20.1 1.4E+02 0.0049 29.4 6.1 45 7-51 244-288 (503)
228 2fb6_A Conserved hypothetical 20.1 1.1E+02 0.0038 23.4 4.1 41 1-43 4-48 (117)
229 1bg6_A N-(1-D-carboxylethyl)-L 20.0 70 0.0024 29.8 3.6 32 5-42 4-35 (359)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.6e-70 Score=552.22 Aligned_cols=433 Identities=26% Similarity=0.391 Sum_probs=343.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCC--ceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNN--HHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDAS 82 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~G--h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (493)
++||+++|+|++||++|++.||+.|+++ | +.|||++++.+..++.+.. . +...+++|..++..-.++. ....+
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~~~~~~~~~-~--~~~~~i~~~~ipdglp~~~-~~~~~ 87 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTTNDTLFSRS-N--EFLPNIKYYNVHDGLPKGY-VSSGN 87 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHHSCSSS-S--CCCTTEEEEECCCCCCTTC-CCCSC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHHHHhhhccc-c--cCCCCceEEecCCCCCCCc-cccCC
Confidence 6899999999999999999999999999 8 9999999874332221111 0 1124799999984322221 11112
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhc----CCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhh
Q 011099 83 LVTQIAVMMHESIPALRSTISAM----KYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQ 158 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~----~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (493)
....+..+.....+.+++.++++ ..++||||+|.+++|+..+|+++|||++.|++++++.++.+.+.+.+.... .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~-~ 166 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT-G 166 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC-C
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc-C
Confidence 22233334444444555555543 458999999999999999999999999999999999998888876655432 1
Q ss_pred hhcccCCCcc-cCCCCCCCCccccccccc-CCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCCC
Q 011099 159 EEHVNQKKPL-KIPGCSAVRFEDTLEAFL-DPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVAK 236 (493)
Q Consensus 159 ~~~~~~~~~~-~~p~l~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~ 236 (493)
.........+ .+||++++...+++..+. .....+...+.+......+++++++||+++||+++++.+++. .
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~-------~ 239 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK-------F 239 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT-------S
T ss_pred CCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc-------C
Confidence 0011112333 489999999999887765 333445666667777788899999999999999988887764 5
Q ss_pred CCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccc
Q 011099 237 APVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFD 316 (493)
Q Consensus 237 p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 316 (493)
|++++|||++..........+.++.+||+.++++++|||||||+...+.+++.+++++|+.++++|||+++....
T Consensus 240 ~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~----- 314 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPK----- 314 (454)
T ss_dssp SCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHH-----
T ss_pred CCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch-----
Confidence 689999999864322111145789999999889999999999999889999999999999999999999965421
Q ss_pred cccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceeecccc
Q 011099 317 SYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLY 396 (493)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~ 396 (493)
..+|++|.++.++ |+.+.+|+||.+||+|+++++|||||||||++|++++|||||++|++
T Consensus 315 -------------------~~lp~~~~~~~~~-~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~ 374 (454)
T 3hbf_A 315 -------------------EKLPKGFLERTKT-KGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFF 374 (454)
T ss_dssp -------------------HHSCTTHHHHTTT-TEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred -------------------hcCCHhHHhhcCC-ceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccc
Confidence 4688899888876 44445999999999999999999999999999999999999999999
Q ss_pred hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 011099 397 AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIA 476 (493)
Q Consensus 397 ~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 476 (493)
+||+.||+++++.+|+|+.++ ...+++++|+++|+++|.++++++||+||+++++.+++++++||||++++++|+
T Consensus 375 ~DQ~~Na~~v~~~~g~Gv~l~-----~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v 449 (454)
T 3hbf_A 375 GDQGLNTILTESVLEIGVGVD-----NGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLI 449 (454)
T ss_dssp TTHHHHHHHHHTTSCSEEECG-----GGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhCeeEEec-----CCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHH
Confidence 999999999953379999986 367899999999999999876778999999999999999999999999999999
Q ss_pred HHHH
Q 011099 477 HECE 480 (493)
Q Consensus 477 ~~~~ 480 (493)
+++.
T Consensus 450 ~~i~ 453 (454)
T 3hbf_A 450 QIVT 453 (454)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4e-67 Score=536.46 Aligned_cols=461 Identities=41% Similarity=0.723 Sum_probs=346.1
Q ss_pred CCCC-CCEEEEEcCCCccCHHHHHHHHHHHHh-cCCceEEEEEcCC--CCchhhhhhccCCCCCCCeEEEEcCCCCCCCC
Q 011099 1 MEIR-KPHVALLASPGMGHLIPVLELGKRLVI-QNNHHATIFVVAN--DTSSEQLSKLVNSPDYDILDIVLLPCIDISGI 76 (493)
Q Consensus 1 m~~~-~~~vl~~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~ 76 (493)
|+.. ++||+++|+|++||++|++.||++|++ + ||+|||++++. +...+.+.. ... ..+++|+.++....++.
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~t~~~~~~~~~~~~~~-~~~--~~~i~~~~l~~~~~~~~ 76 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLH-GLTVTFVIAGEGPPSKAQRTVL-DSL--PSSISSVFLPPVDLTDL 76 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHH-CCEEEEEECCSSSCC-CHHHHH-C-C--CTTEEEEECCCCCCTTS
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCC-CCEEEEEECCCcchhhhhhhhc-ccc--CCCceEEEcCCCCCCCC
Confidence 6664 489999999999999999999999997 5 79999999987 444443311 110 13789999886432221
Q ss_pred CCCCcchHHHHHHHHHHhhHHHHHHHHhc--CCCC-cEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchh
Q 011099 77 VCTDASLVTQIAVMMHESIPALRSTISAM--KYRP-TALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALD 153 (493)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~~~~-DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~ 153 (493)
....+....+........+.++++++++ ..++ ||||+|.++.|+..+|+++|||++.++++++...+.+.++|...
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 155 (480)
T 2vch_A 77 -SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLD 155 (480)
T ss_dssp -CTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHH
T ss_pred -CCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHH
Confidence 1112333334455566677888888774 3478 99999999999999999999999999999988777776666544
Q ss_pred hhhhhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhcc
Q 011099 154 KKVLQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRR 233 (493)
Q Consensus 154 ~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 233 (493)
+.. ...+........+|+++++...+++..+..+....+..+.+....+++..++++||+.+++...+..+++ ++
T Consensus 156 ~~~-~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~----~~ 230 (480)
T 2vch_A 156 ETV-SCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQE----PG 230 (480)
T ss_dssp HHC-CSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHS----CC
T ss_pred hcC-CCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHh----cc
Confidence 322 1112111233456787777777776655444334445555555667788899999999999988887776 22
Q ss_pred CCCCCeEEeccccCCCCCCC-CcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q 011099 234 VAKAPVYPVGPLARSVASSP-VSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDH 312 (493)
Q Consensus 234 ~~~p~~~~vGp~~~~~~~~~-~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 312 (493)
+++|++++|||++....... ...+.++.+||++++++++|||||||+...+.+++.+++++|+.++++|||+++.....
T Consensus 231 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~ 310 (480)
T 2vch_A 231 LDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI 310 (480)
T ss_dssp TTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred cCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc
Confidence 23567999999986532100 12567899999998888999999999988899999999999999999999999865310
Q ss_pred CccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceee
Q 011099 313 DVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIV 392 (493)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~ 392 (493)
. ...+++..... + + ...+|++|.++++++|+++.+|+||.+||+|++|++|||||||||++||+++|||||+
T Consensus 311 ~-~~~~~~~~~~~----~--~-~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~ 382 (480)
T 2vch_A 311 A-NSSYFDSHSQT----D--P-LTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIA 382 (480)
T ss_dssp T-TTTTTCC--CS----C--G-GGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred c-ccccccccccc----c--h-hhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEe
Confidence 0 00000000000 0 0 0358999999998888888679999999999999999999999999999999999999
Q ss_pred cccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHH
Q 011099 393 WPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSL 472 (493)
Q Consensus 393 ~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~ 472 (493)
+|+++||+.||+++++++|+|+.++. .. ++.+++++|+++|+++|.++++.+||+||+++++.+++++.+||++..++
T Consensus 383 ~P~~~DQ~~na~~l~~~~G~g~~l~~-~~-~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~ 460 (480)
T 2vch_A 383 WPLYAEQKMNAVLLSEDIRAALRPRA-GD-DGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKAL 460 (480)
T ss_dssp CCCSTTHHHHHHHHHHTTCCEECCCC-CT-TSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred ccccccchHHHHHHHHHhCeEEEeec-cc-CCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 99999999999997569999999761 11 12689999999999999865556699999999999999999999999999
Q ss_pred HHHHHHHHh
Q 011099 473 SKIAHECEN 481 (493)
Q Consensus 473 ~~~~~~~~~ 481 (493)
++|++++++
T Consensus 461 ~~~v~~~~~ 469 (480)
T 2vch_A 461 SLVALKWKA 469 (480)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999986
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2e-62 Score=499.75 Aligned_cols=434 Identities=30% Similarity=0.549 Sum_probs=332.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCch-hhhhh--ccCCCCCCCeEEEEcCCCCCCCCCCCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSS-EQLSK--LVNSPDYDILDIVLLPCIDISGIVCTD 80 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~-v~~~~--~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (493)
++||+++|+|++||++|++.||++|++|+ ||+|||++++.+... +.... .... ..+++|..++....+.. ...
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~--~~~i~~~~lp~~~~~~~-~~~ 85 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLAS--QPQIQLIDLPEVEPPPQ-ELL 85 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCS--CTTEEEEECCCCCCCCG-GGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccC--CCCceEEECCCCCCCcc-ccc
Confidence 58999999999999999999999999885 799999999875321 11110 0111 13799999986432211 000
Q ss_pred cchHHHHHHHHHHhhHHHHHHHHhc-CCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhh
Q 011099 81 ASLVTQIAVMMHESIPALRSTISAM-KYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQE 159 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~ll~~~-~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (493)
......+...+....+.++++++++ ..++||||+|.++.|+..+|+++|||++.++++++...+.+.++|.+... .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~---~ 162 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE---E 162 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT---C
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc---C
Confidence 1111114445566777888888873 24899999999999999999999999999999998887777666644211 1
Q ss_pred hcccCCC---cccCCCC-CCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCC
Q 011099 160 EHVNQKK---PLKIPGC-SAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVA 235 (493)
Q Consensus 160 ~~~~~~~---~~~~p~l-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~ 235 (493)
.+..... ...+|++ +++...+++..+..+ ...+..+.+....+++..++++||++++|++.+..+.+.. +|
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~---~p- 237 (463)
T 2acv_A 163 VFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD---EK- 237 (463)
T ss_dssp CCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC---TT-
T ss_pred CCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc---cc-
Confidence 1111111 3456777 666666665554444 3455555566666778889999999999999888887741 12
Q ss_pred CCCeEEeccccCCCC-CC-C--CcccccccccccCCCCCeEEEEEcCCCC-CCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011099 236 KAPVYPVGPLARSVA-SS-P--VSGSHVVLDWLDKQPHESVIYVSFGSGG-TLSSKQTMELAWGLEQSKQRFIWVVRPPL 310 (493)
Q Consensus 236 ~p~~~~vGp~~~~~~-~~-~--~~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 310 (493)
.|++++|||++.... .. . +..+.++.+||+.++++++|||||||+. ..+.+++.+++++|+..+++|||+++...
T Consensus 238 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 317 (463)
T 2acv_A 238 IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK 317 (463)
T ss_dssp SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG
T ss_pred CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc
Confidence 456999999986532 10 0 0145688999999888999999999998 88888899999999999999999996420
Q ss_pred CCCccccccccCCCCCcccccccccCCCchhHHhhh--CCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCC
Q 011099 311 DHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRT--RDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGV 388 (493)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~Gv 388 (493)
..+|++|.++. ++ ++.+.+|+||.++|+|+++++|||||||||++||+++||
T Consensus 318 -------------------------~~l~~~~~~~~~~~~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~Gv 371 (463)
T 2acv_A 318 -------------------------KVFPEGFLEWMELEG-KGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGV 371 (463)
T ss_dssp -------------------------GGSCTTHHHHHHHHC-SEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTC
T ss_pred -------------------------ccCChhHHHhhccCC-CEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCC
Confidence 24677777666 44 445558999999999999999999999999999999999
Q ss_pred ceeecccchhcchhhHhhhhheeeeEEe-eccCCCCC--ccchHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHhhc
Q 011099 389 PMIVWPLYAEQKMNATMLTEELRVAIRS-KEVPSEKS--VVERGEIEMMVRRIVA-EKQGHAIRNRVEELKHSAQKALIN 464 (493)
Q Consensus 389 P~l~~P~~~DQ~~na~~v~e~~Gvg~~~-~~~~~~~~--~~~~~~l~~ai~~vl~-~~~~~~~r~~a~~l~~~~~~a~~~ 464 (493)
|||++|+++||+.||+++++++|+|+.+ ..... . .+++++|.++|+++|+ +++ ||+||+++++.+++++.+
T Consensus 372 P~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~--~~~~~~~~~l~~ai~~ll~~~~~---~r~~a~~l~~~~~~a~~~ 446 (463)
T 2acv_A 372 PILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK--GSDVVAAEEIEKGLKDLMDKDSI---VHKKVQEMKEMSRNAVVD 446 (463)
T ss_dssp CEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT--TCCCCCHHHHHHHHHHHTCTTCT---HHHHHHHHHHHHHHHTST
T ss_pred CeeeccchhhhHHHHHHHHHHcCeEEEEecccCC--CCccccHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhc
Confidence 9999999999999999954799999997 21111 4 6899999999999997 356 999999999999999999
Q ss_pred CCChHHHHHHHHHHHH
Q 011099 465 GGSSYNSLSKIAHECE 480 (493)
Q Consensus 465 ~g~~~~~~~~~~~~~~ 480 (493)
||+|++++++|+++++
T Consensus 447 gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 447 GGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhc
Confidence 9999999999999985
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.9e-62 Score=503.58 Aligned_cols=441 Identities=27% Similarity=0.502 Sum_probs=322.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCC-CCCeEEEEcCCCCCCCC---CCCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPD-YDILDIVLLPCIDISGI---VCTD 80 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~-~~~i~~~~l~~~~~~~~---~~~~ 80 (493)
++||+++|+|++||++|++.||++|++| ||+|||++++.+...+.+........ ..+++|..++.. .+.. ....
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-lp~~~~~~~~~ 85 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDG-LTPMEGDGDVS 85 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHHHHHHC------------CEEEEEECCC-CC---------
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCchhhhhccccccccccCCCceEEEECCCC-CCCcccccCcc
Confidence 5899999999999999999999999999 99999999986543332220000000 027889888741 1110 0101
Q ss_pred cchHHHHHHHHHHhhHHHHHHHHhc-C----CCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhh
Q 011099 81 ASLVTQIAVMMHESIPALRSTISAM-K----YRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKK 155 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~ll~~~-~----~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~ 155 (493)
......+......+.+.++++++.+ . .++||||+|.++.|+..+|+++|||++.++++++.....+.+++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 1222222222244556778888765 1 4899999999999999999999999999999998776665443322111
Q ss_pred h-hhh---hcccC---CCc-ccCCCCCCCCcccccccccCC--CCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHH
Q 011099 156 V-LQE---EHVNQ---KKP-LKIPGCSAVRFEDTLEAFLDP--YGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAAL 225 (493)
Q Consensus 156 ~-~~~---~~~~~---~~~-~~~p~l~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 225 (493)
. .+. .+... ... ..+|+++.+...+++..+... .......+.+........+++++||+++||++.++.+
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~ 245 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHH
Confidence 0 010 00000 111 134566555555554443221 1223333333444556788999999999999887776
Q ss_pred HhhhhhccCCCCCeEEeccccCC-CCC----------CC-CcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHH
Q 011099 226 RDFNMLRRVAKAPVYPVGPLARS-VAS----------SP-VSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAW 293 (493)
Q Consensus 226 ~~~~~~~~~~~p~~~~vGp~~~~-~~~----------~~-~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~ 293 (493)
++. +|++++|||++.. ... .. +..+.++.+||+.++++++|||||||+...+.+++.++++
T Consensus 246 ~~~-------~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 318 (482)
T 2pq6_A 246 SST-------IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAW 318 (482)
T ss_dssp HTT-------CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHH
T ss_pred HHh-------CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHH
Confidence 664 5679999999763 111 00 0134468899999888899999999998888889999999
Q ss_pred HHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccc
Q 011099 294 GLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLT 373 (493)
Q Consensus 294 al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~ 373 (493)
+|+.++++|||+++..... + + . ..+|++|.++.++ |+.+.+|+||.++|+|+++++|||
T Consensus 319 ~l~~~~~~~l~~~~~~~~~------------~----~--~--~~l~~~~~~~~~~-~~~v~~~~pq~~~L~h~~~~~~vt 377 (482)
T 2pq6_A 319 GLANCKKSFLWIIRPDLVI------------G----G--S--VIFSSEFTNEIAD-RGLIASWCPQDKVLNHPSIGGFLT 377 (482)
T ss_dssp HHHHTTCEEEEECCGGGST------------T----T--G--GGSCHHHHHHHTT-TEEEESCCCHHHHHTSTTEEEEEE
T ss_pred HHHhcCCcEEEEEcCCccc------------c----c--c--ccCcHhHHHhcCC-CEEEEeecCHHHHhcCCCCCEEEe
Confidence 9999999999999643210 0 0 0 2378888887765 666669999999999999999999
Q ss_pred cCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHH
Q 011099 374 HCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEE 453 (493)
Q Consensus 374 HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~ 453 (493)
||||||++||+++|||||++|+++||+.||+++++++|+|+.++ ..+++++|+++|+++|.|+++++||+||++
T Consensus 378 h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~------~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~ 451 (482)
T 2pq6_A 378 HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID------TNVKREELAKLINEVIAGDKGKKMKQKAME 451 (482)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC------SSCCHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC------CCCCHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999855899999975 568999999999999998766779999999
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 011099 454 LKHSAQKALINGGSSYNSLSKIAHECEN 481 (493)
Q Consensus 454 l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 481 (493)
+++.+++|+.+||++.+++++|+++++.
T Consensus 452 l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 452 LKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 9999999999999999999999999854
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.6e-62 Score=496.59 Aligned_cols=437 Identities=26% Similarity=0.416 Sum_probs=315.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCce--EEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCc
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHH--ATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDA 81 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~--Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 81 (493)
+++||+++|+|++||++|++.||++|++| ||+ ||+++++.....+.+...... ..+++|..++.. .+.......
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~~~~~~~~~~~~~~--~~~i~~~~i~~g-lp~~~~~~~ 81 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQSNASIFHDSMHTM--QCNIKSYDISDG-VPEGYVFAG 81 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHHHC---------CTTEEEEECCCC-CCTTCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCchhHHHhhccccccC--CCceEEEeCCCC-CCCcccccC
Confidence 46899999999999999999999999999 655 577877632222211111100 137889888742 111100011
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhc----CCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhh
Q 011099 82 SLVTQIAVMMHESIPALRSTISAM----KYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVL 157 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~ll~~~----~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 157 (493)
.....+..+.....+.++++++++ ..++||||+|.++.|+..+|+++|||++.++++++..+..+.+.+.+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 82 RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 122222222222333444444432 3589999999999999999999999999999998877666554443322210
Q ss_pred -hhhcccCCCcc-cCCCCCCCCcccccccccCC-CC-cchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhcc
Q 011099 158 -QEEHVNQKKPL-KIPGCSAVRFEDTLEAFLDP-YG-PMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRR 233 (493)
Q Consensus 158 -~~~~~~~~~~~-~~p~l~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 233 (493)
..........+ .+|+++++...+++..+... .. .+...+.+.....++++++++||++++|++....+++.
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~----- 236 (456)
T 2c1x_A 162 VSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK----- 236 (456)
T ss_dssp SSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH-----
T ss_pred CcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc-----
Confidence 00001111222 46777776666665433211 11 12222223333456788999999999999887777764
Q ss_pred CCCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCC
Q 011099 234 VAKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHD 313 (493)
Q Consensus 234 ~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 313 (493)
+|++++|||++..........+.++.+||+.++++++|||||||+...+.+++.+++++|+..+++|||+++....
T Consensus 237 --~~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~-- 312 (456)
T 2c1x_A 237 --LKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKAR-- 312 (456)
T ss_dssp --SSCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGG--
T ss_pred --CCCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcch--
Confidence 5679999999864321111123568899999888899999999998888888999999999999999999964321
Q ss_pred ccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceeec
Q 011099 314 VFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVW 393 (493)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~ 393 (493)
..+|++|.++.++ |+.+.+|+||.++|+|+++++|||||||||++||+++|||||++
T Consensus 313 ----------------------~~l~~~~~~~~~~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~ 369 (456)
T 2c1x_A 313 ----------------------VHLPEGFLEKTRG-YGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICR 369 (456)
T ss_dssp ----------------------GGSCTTHHHHHTT-TEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred ----------------------hhCCHHHHhhcCC-ceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEec
Confidence 4578888777655 56666999999999999999999999999999999999999999
Q ss_pred ccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHH
Q 011099 394 PLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLS 473 (493)
Q Consensus 394 P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~ 473 (493)
|+++||+.||+++++.+|+|+.++ ...+++++|+++|+++|.|+++++||+||+++++.+++++.+||||+.+++
T Consensus 370 P~~~dQ~~Na~~l~~~~g~g~~l~-----~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 444 (456)
T 2c1x_A 370 PFFGDQRLNGRMVEDVLEIGVRIE-----GGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFI 444 (456)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEECG-----GGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHH
T ss_pred CChhhHHHHHHHHHHHhCeEEEec-----CCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHH
Confidence 999999999999954449999986 267899999999999999876677999999999999999999999999999
Q ss_pred HHHHHHHh
Q 011099 474 KIAHECEN 481 (493)
Q Consensus 474 ~~~~~~~~ 481 (493)
+|+++++.
T Consensus 445 ~~v~~~~~ 452 (456)
T 2c1x_A 445 TLVDLVSK 452 (456)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHh
Confidence 99999864
No 6
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.5e-45 Score=367.75 Aligned_cols=367 Identities=15% Similarity=0.159 Sum_probs=229.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCC---C-
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVC---T- 79 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~---~- 79 (493)
++|||+|+++|+.||++|+++||++|++| ||+|||++++.+... .+.++...+...+..+............. .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDIRAV-AEAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSSTHHH-HTTTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcchhhH-HhcCCeeEecCCchhHhhhccccccccccccchh
Confidence 36999999999999999999999999999 999999999876442 23333222111111111110000000000 0
Q ss_pred Ccc---hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhh
Q 011099 80 DAS---LVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKV 156 (493)
Q Consensus 80 ~~~---~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 156 (493)
... ....+..........+.++++++ +||+||+|.+.+++..+|+.+|||++.+..++.......... ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~---~~~- 172 (400)
T 4amg_A 99 GLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL---IRR- 172 (400)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH---HHH-
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH---HHH-
Confidence 000 11112223333445566677777 999999999999999999999999998765542211100000 000
Q ss_pred hhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHh-hhccCccEEEEcCh-hhhhHHHHHHHHhhhhhccC
Q 011099 157 LQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVG-MDMSKADGILVNTW-EDLESKTLAALRDFNMLRRV 234 (493)
Q Consensus 157 ~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~-~~l~~~~~~~~~~~~~~~~~ 234 (493)
......+.. .............. ..... ..+. . .
T Consensus 173 -----------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~-~- 208 (400)
T 4amg_A 173 -----------------------------------AMSKDYERHGVTGEPTGSVRLTTTPPSVEA-----LLPE--D-R- 208 (400)
T ss_dssp -----------------------------------HTHHHHHHTTCCCCCSCEEEEECCCHHHHH-----TSCG--G-G-
T ss_pred -----------------------------------HHHHHHHHhCCCcccccchhhcccCchhhc-----cCcc--c-c-
Confidence 000000000 00111111111111 11100 0000 0 0
Q ss_pred CCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCC--HHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q 011099 235 AKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLS--SKQTMELAWGLEQSKQRFIWVVRPPLDH 312 (493)
Q Consensus 235 ~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~~~ 312 (493)
..+....+.+.... ....+.+|++..+++++|||||||+...+ .+.+.+++++++..+.+++|..+.....
T Consensus 209 ~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~ 281 (400)
T 4amg_A 209 RSPGAWPMRYVPYN-------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA 281 (400)
T ss_dssp CCTTCEECCCCCCC-------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC
T ss_pred cCCcccCccccccc-------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc
Confidence 12223333332221 34556678988888999999999986543 3568889999999999999998765321
Q ss_pred CccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceee
Q 011099 313 DVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIV 392 (493)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~ 392 (493)
. . ..+|+ |+.+.+|+||.++|+|++ +||||||+||++||+++|||+|+
T Consensus 282 ~-------------------~--~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~ 329 (400)
T 4amg_A 282 L-------------------L--GELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCV 329 (400)
T ss_dssp C-------------------C--CCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEE
T ss_pred c-------------------c--ccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEE
Confidence 0 1 34555 788889999999999999 99999999999999999999999
Q ss_pred cccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHH
Q 011099 393 WPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSL 472 (493)
Q Consensus 393 ~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~ 472 (493)
+|+++||+.||+++ +++|+|+.++ ..+.++ ++|+++|+|++ ||++|+++++++++. +|. ..+
T Consensus 330 ~P~~~dQ~~na~~v-~~~G~g~~l~-----~~~~~~----~al~~lL~d~~---~r~~a~~l~~~~~~~---~~~--~~~ 391 (400)
T 4amg_A 330 IPHGSYQDTNRDVL-TGLGIGFDAE-----AGSLGA----EQCRRLLDDAG---LREAALRVRQEMSEM---PPP--AET 391 (400)
T ss_dssp CCC---CHHHHHHH-HHHTSEEECC-----TTTCSH----HHHHHHHHCHH---HHHHHHHHHHHHHTS---CCH--HHH
T ss_pred ecCcccHHHHHHHH-HHCCCEEEcC-----CCCchH----HHHHHHHcCHH---HHHHHHHHHHHHHcC---CCH--HHH
Confidence 99999999999999 6999999976 244554 57788998887 999999999998763 543 344
Q ss_pred HHHHHHH
Q 011099 473 SKIAHEC 479 (493)
Q Consensus 473 ~~~~~~~ 479 (493)
.+.++.+
T Consensus 392 a~~le~l 398 (400)
T 4amg_A 392 AAXLVAL 398 (400)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4555544
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.3e-43 Score=356.14 Aligned_cols=378 Identities=18% Similarity=0.222 Sum_probs=247.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCC-C--Cc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVC-T--DA 81 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~-~--~~ 81 (493)
.+||+|+++|+.||++|++.||++|+++ ||+|+|++++.+.+.+... +++|..++......... . ..
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 81 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWPE 81 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCCS
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcch
Confidence 4799999999999999999999999999 9999999999776555554 35555555321111000 0 11
Q ss_pred chHHH---HHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhh
Q 011099 82 SLVTQ---IAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQ 158 (493)
Q Consensus 82 ~~~~~---~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (493)
+.... +........+.+.+++++. +||+||+|.+.+++..+|+++|||++.+++.+....... ..+... . .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~--~-~ 155 (424)
T 2iya_A 82 DQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAV--Q-D 155 (424)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGG--S-C
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-cccccc--c-c
Confidence 22111 2222233444555555554 999999999888999999999999999987653110000 000000 0 0
Q ss_pred hhcccCCCcccCC-CCCC-CCcccccccccCCCCcchHHHHHHh-------hhccCccEEEEcChhhhhHHHHHHHHhhh
Q 011099 159 EEHVNQKKPLKIP-GCSA-VRFEDTLEAFLDPYGPMYDGFLQVG-------MDMSKADGILVNTWEDLESKTLAALRDFN 229 (493)
Q Consensus 159 ~~~~~~~~~~~~p-~l~~-~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~l~~~~~~~~~~~~ 229 (493)
.+.........| +... .......... ..........++.. ......+.+++++.++++++.
T Consensus 156 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-------- 225 (424)
T 2iya_A 156 -PTADRGEEAAAPAGTGDAEEGAEAEDGL-VRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-------- 225 (424)
T ss_dssp -CCC---------------------HHHH-HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG--------
T ss_pred -cccccccccccccccccchhhhccchhH-HHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc--------
Confidence 000000000000 0000 0000000000 00000011111110 001134567888888887531
Q ss_pred hhccCCCC-CeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011099 230 MLRRVAKA-PVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRP 308 (493)
Q Consensus 230 ~~~~~~~p-~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 308 (493)
+ .++ ++++|||+.... .+..+|++..+++++|||++||......+.+.+++++++..+.+++|+++.
T Consensus 226 ---~-~~~~~~~~vGp~~~~~--------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 293 (424)
T 2iya_A 226 ---D-TVGDNYTFVGPTYGDR--------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGR 293 (424)
T ss_dssp ---G-GCCTTEEECCCCCCCC--------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCT
T ss_pred ---c-CCCCCEEEeCCCCCCc--------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECC
Confidence 0 233 499999986421 123468776667789999999998666788899999999989999998865
Q ss_pred CCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCC
Q 011099 309 PLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGV 388 (493)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~Gv 388 (493)
..... .+ ..+| .|+.+.+|+||.++|+|++ +||||||+||++||+++||
T Consensus 294 ~~~~~------------------~~--~~~~---------~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~ 342 (424)
T 2iya_A 294 FVDPA------------------DL--GEVP---------PNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAV 342 (424)
T ss_dssp TSCGG------------------GG--CSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTC
T ss_pred cCChH------------------Hh--ccCC---------CCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCC
Confidence 32100 00 1122 2788889999999999999 9999999999999999999
Q ss_pred ceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q 011099 389 PMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQK 460 (493)
Q Consensus 389 P~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 460 (493)
|+|++|+..||+.||+++ +++|+|+.++ ...++.++|.++|+++|+|++ +|++++++++.++.
T Consensus 343 P~i~~p~~~dQ~~na~~l-~~~g~g~~~~-----~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 343 PMVAVPQIAEQTMNAERI-VELGLGRHIP-----RDQVTAEKLREAVLAVASDPG---VAERLAAVRQEIRE 405 (424)
T ss_dssp CEEECCCSHHHHHHHHHH-HHTTSEEECC-----GGGCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT
T ss_pred CEEEecCccchHHHHHHH-HHCCCEEEcC-----cCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh
Confidence 999999999999999999 6899999975 256899999999999999877 99999999998665
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.1e-41 Score=340.62 Aligned_cols=380 Identities=12% Similarity=0.064 Sum_probs=241.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchHH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLVT 85 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (493)
|||+|++.|+.||++|+++||++|++| ||+|||++++.+...+... ++++..++................
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~ 70 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAE 70 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchH
Confidence 689999999999999999999999999 9999999999754444443 455665554211100000011111
Q ss_pred HHHHHHHHh-hHHHHHHHHhcCCCCcEEEECC-cchh--HHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhhhc
Q 011099 86 QIAVMMHES-IPALRSTISAMKYRPTALIVDL-FGTE--AMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQEEH 161 (493)
Q Consensus 86 ~~~~~~~~~-~~~l~~ll~~~~~~~DlVI~D~-~~~~--a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 161 (493)
.+....... ...++++.+. ..+||+||+|. +..+ +..+|+++|||++.++++++.... .++|..
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--~~~p~~--------- 138 (415)
T 1iir_A 71 DVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--PYYPPP--------- 138 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSCCC---------
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC--cccCCc---------
Confidence 222222211 2233444431 34999999997 7777 888999999999999876532100 000000
Q ss_pred ccCCCcccCCCCCCCCcccccccccC-----CCCcchHHHHHHhhhc----------cCccEEEEcChhhhhHHHHHHHH
Q 011099 162 VNQKKPLKIPGCSAVRFEDTLEAFLD-----PYGPMYDGFLQVGMDM----------SKADGILVNTWEDLESKTLAALR 226 (493)
Q Consensus 162 ~~~~~~~~~p~l~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~----------~~~~~~l~~s~~~l~~~~~~~~~ 226 (493)
.....+++ ......+...+.. ......+...+.. .+ ... .+++++.+.+++.
T Consensus 139 ---~~~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~-~~l~~~~~~l~~~------ 205 (415)
T 1iir_A 139 ---PLGEPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAI-GLPPVEDIFTFGYTD-HPWVAADPVLAPL------ 205 (415)
T ss_dssp ---C-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCHHHHHHCS-SCEECSCTTTSCC------
T ss_pred ---cCCccccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc-CCCCCCccccccCCC-CEEEeeChhhcCC------
Confidence 00000000 0000000000000 0000000000000 00 111 4567777666531
Q ss_pred hhhhhccCCCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011099 227 DFNMLRRVAKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVV 306 (493)
Q Consensus 227 ~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 306 (493)
+++.+ ++++|||+..... . ..+.++.+|++.+ +++|||++||+. ...+.+..++++++.++.+++|++
T Consensus 206 -----~~~~~-~~~~vG~~~~~~~-~--~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~ 273 (415)
T 1iir_A 206 -----QPTDL-DAVQTGAWILPDE-R--PLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSR 273 (415)
T ss_dssp -----CCCSS-CCEECCCCCCCCC-C--CCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECT
T ss_pred -----CcccC-CeEeeCCCccCcc-c--CCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEe
Confidence 11122 7899999987532 1 1567889999764 369999999987 566778889999999999999988
Q ss_pred cCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHh
Q 011099 307 RPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVN 386 (493)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~ 386 (493)
+..... . ..+++ |+.+.+|+||.++|++++ +||||||+||++||+++
T Consensus 274 g~~~~~--------------------~--~~~~~---------~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~ 320 (415)
T 1iir_A 274 GWADLV--------------------L--PDDGA---------DCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARA 320 (415)
T ss_dssp TCTTCC--------------------C--SSCGG---------GEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHH
T ss_pred CCCccc--------------------c--cCCCC---------CEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHc
Confidence 654210 0 12233 788889999999998888 99999999999999999
Q ss_pred CCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCC
Q 011099 387 GVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGG 466 (493)
Q Consensus 387 GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g 466 (493)
|||+|++|+.+||+.||+++ +++|+|+.++ ...++.++|.++|+++ .|++ +|++++++++.++. .+
T Consensus 321 G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~-----~~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~~----~~ 386 (415)
T 1iir_A 321 GAPQILLPQMADQPYYAGRV-AELGVGVAHD-----GPIPTFDSLSAALATA-LTPE---THARATAVAGTIRT----DG 386 (415)
T ss_dssp TCCEEECCCSTTHHHHHHHH-HHHTSEEECS-----SSSCCHHHHHHHHHHH-TSHH---HHHHHHHHHHHSCS----CH
T ss_pred CCCEEECCCCCccHHHHHHH-HHCCCcccCC-----cCCCCHHHHHHHHHHH-cCHH---HHHHHHHHHHHHhh----cC
Confidence 99999999999999999999 7999999875 2568999999999999 8876 99999999888532 22
Q ss_pred ChHHHHHHHHHHHH
Q 011099 467 SSYNSLSKIAHECE 480 (493)
Q Consensus 467 ~~~~~~~~~~~~~~ 480 (493)
+. ..+.++++++.
T Consensus 387 ~~-~~~~~~i~~~~ 399 (415)
T 1iir_A 387 AA-VAARLLLDAVS 399 (415)
T ss_dssp HH-HHHHHHHHHHH
T ss_pred hH-HHHHHHHHHHH
Confidence 22 34455555544
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.7e-40 Score=332.90 Aligned_cols=366 Identities=11% Similarity=0.043 Sum_probs=237.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCC--Ccch
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCT--DASL 83 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~--~~~~ 83 (493)
|||+|++.++.||++|+++||++|+++ ||+|+|++++.+.+.+... ++++..++....... .. ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~-~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMML-QEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCC-CTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHH-hhccccch
Confidence 689999999999999999999999999 9999999998765555554 355555553211100 10 0111
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECC-cchh--HHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhhh
Q 011099 84 VTQIAVMMHESIPALRSTISAMKYRPTALIVDL-FGTE--AMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQEE 160 (493)
Q Consensus 84 ~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~-~~~~--a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (493)
...+..........+.+.+.+...+||+||+|. +.++ +..+|+.+|||++.+++++..... .++|
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~~p---------- 137 (416)
T 1rrv_A 70 PEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PHLP---------- 137 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSC----------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--cccC----------
Confidence 111222222221222222221134899999996 5666 788999999999998876522100 0000
Q ss_pred cccCCCcccC-CC-CCCCCccc-ccccccCCCCcchHHHHHHh---------hhccCccEEEEcChhhhhHHHHHHHHhh
Q 011099 161 HVNQKKPLKI-PG-CSAVRFED-TLEAFLDPYGPMYDGFLQVG---------MDMSKADGILVNTWEDLESKTLAALRDF 228 (493)
Q Consensus 161 ~~~~~~~~~~-p~-l~~~~~~~-l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~s~~~l~~~~~~~~~~~ 228 (493)
+...... ++ +.+..... .....+.......+.+.+.. ...... .+++++.++++++
T Consensus 138 ---~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-------- 205 (416)
T 1rrv_A 138 ---PAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-------- 205 (416)
T ss_dssp ---CCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC--------
T ss_pred ---CCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC--------
Confidence 0000000 00 00000000 00000000000000111100 001122 5677777777642
Q ss_pred hhhccCCCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCC-CCHHHHHHHHHHHHhCCCcEEEEEc
Q 011099 229 NMLRRVAKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGT-LSSKQTMELAWGLEQSKQRFIWVVR 307 (493)
Q Consensus 229 ~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~ 307 (493)
+ +.+++++|||+..... . ..+.++.+|++.+ +++|||++||... ...+.+.+++++++..+.+++|+++
T Consensus 206 ----~-~~~~~~~vG~~~~~~~-~--~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g 275 (416)
T 1rrv_A 206 ----Q-PDVDAVQTGAWLLSDE-R--PLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRG 275 (416)
T ss_dssp ----C-SSCCCEECCCCCCCCC-C--CCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred ----C-CCCCeeeECCCccCcc-C--CCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeC
Confidence 1 1227899999987532 1 1567788999764 3699999999864 3445678899999999999999986
Q ss_pred CCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhC
Q 011099 308 PPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNG 387 (493)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~G 387 (493)
..... . ..+|+ |+.+.+|+||.++|++++ +||||||+||++||+++|
T Consensus 276 ~~~~~--------------------~--~~~~~---------~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G 322 (416)
T 1rrv_A 276 WTELV--------------------L--PDDRD---------DCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAG 322 (416)
T ss_dssp TTTCC--------------------C--SCCCT---------TEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHT
T ss_pred Ccccc--------------------c--cCCCC---------CEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcC
Confidence 54210 0 12222 788889999999998888 999999999999999999
Q ss_pred CceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 011099 388 VPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQ 459 (493)
Q Consensus 388 vP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 459 (493)
||+|++|+..||+.||+++ ++.|+|+.++ ...+++++|.++|+++ .|++ ||++++++++.++
T Consensus 323 ~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~-----~~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 323 VPQLVIPRNTDQPYFAGRV-AALGIGVAHD-----GPTPTFESLSAALTTV-LAPE---TRARAEAVAGMVL 384 (416)
T ss_dssp CCEEECCCSBTHHHHHHHH-HHHTSEEECS-----SSCCCHHHHHHHHHHH-TSHH---HHHHHHHHTTTCC
T ss_pred CCEEEccCCCCcHHHHHHH-HHCCCccCCC-----CCCCCHHHHHHHHHHh-hCHH---HHHHHHHHHHHHh
Confidence 9999999999999999999 6999999875 2568999999999999 8876 9999999888744
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.3e-39 Score=327.21 Aligned_cols=348 Identities=13% Similarity=0.070 Sum_probs=231.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCC--CCC-CCCCcc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDI--SGI-VCTDAS 82 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~--~~~-~~~~~~ 82 (493)
|||+|++.++.||++|++.||++|+++ ||+|+|++++.+.+.+...++ .+..++.... ... ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~~~~~v~~~g~---------~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPDYVERCAEVGV---------PMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGGGHHHHHHTTC---------CEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHHHHHcCC---------ceeecCCCHHHHhccccCCHHH
Confidence 689999999999999999999999999 999999999887666666654 4444442111 000 001111
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhH---HHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhh
Q 011099 83 LVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEA---MAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQE 159 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a---~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (493)
....+..........+.+++ .+||+||+|.....+ ..+|+++|||++.+..++....+... ..... .
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~--~~~~~-~--- 140 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQS--QAERD-M--- 140 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSC--HHHHH-H---
T ss_pred HHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhH--HHHHH-H---
Confidence 11122222233333333333 279999998655544 67999999999998877642100000 00000 0
Q ss_pred hcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccC---------ccEEEEcChhhhhHHHHHHHHhhhh
Q 011099 160 EHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSK---------ADGILVNTWEDLESKTLAALRDFNM 230 (493)
Q Consensus 160 ~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~s~~~l~~~~~~~~~~~~~ 230 (493)
.....+.......+...... .+.. .+..+++..+.+.+
T Consensus 141 ---------------------~~~~~~~~~~~~~~~~~~~l-gl~~~~~~~~~~~~~~~l~~~~~~l~p----------- 187 (404)
T 3h4t_A 141 ---------------------YNQGADRLFGDAVNSHRASI-GLPPVEHLYDYGYTDQPWLAADPVLSP----------- 187 (404)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHT-TCCCCCCHHHHHHCSSCEECSCTTTSC-----------
T ss_pred ---------------------HHHHHHHHhHHHHHHHHHHc-CCCCCcchhhccccCCeEEeeCcceeC-----------
Confidence 00000000000000000000 0000 01123333333322
Q ss_pred hccCCCC-CeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 011099 231 LRRVAKA-PVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPP 309 (493)
Q Consensus 231 ~~~~~~p-~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 309 (493)
+++++ +++++|++..+... . +++++.+|++. .+++|||++||+.. ..+.+..++++++..+.++||+.+..
T Consensus 188 --~~~~~~~~~~~G~~~~~~~~-~--~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~ 259 (404)
T 3h4t_A 188 --LRPTDLGTVQTGAWILPDQR-P--LSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWA 259 (404)
T ss_dssp --CCTTCCSCCBCCCCCCCCCC-C--CCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTT
T ss_pred --CCCCCCCeEEeCccccCCCC-C--CCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 22333 48899988765321 1 67788889875 45699999999876 66778899999999999999998754
Q ss_pred CCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCc
Q 011099 310 LDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVP 389 (493)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP 389 (493)
.... ..++ +|+.+.+|+||.++|++++ +||||||+||++||+++|||
T Consensus 260 ~~~~----------------------~~~~---------~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP 306 (404)
T 3h4t_A 260 GLGR----------------------IDEG---------DDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAP 306 (404)
T ss_dssp TCCC----------------------SSCC---------TTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCC
T ss_pred cccc----------------------ccCC---------CCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCC
Confidence 3210 1122 2788889999999999988 99999999999999999999
Q ss_pred eeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011099 390 MIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHS 457 (493)
Q Consensus 390 ~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~ 457 (493)
+|++|+++||+.||+++ ++.|+|..+. ...++.++|.++|+++++ ++ |+++++++++.
T Consensus 307 ~v~~p~~~dQ~~na~~~-~~~G~g~~l~-----~~~~~~~~l~~ai~~ll~-~~---~~~~~~~~~~~ 364 (404)
T 3h4t_A 307 QVVVPQKADQPYYAGRV-ADLGVGVAHD-----GPTPTVESLSAALATALT-PG---IRARAAAVAGT 364 (404)
T ss_dssp EEECCCSTTHHHHHHHH-HHHTSEEECS-----SSSCCHHHHHHHHHHHTS-HH---HHHHHHHHHTT
T ss_pred EEEcCCcccHHHHHHHH-HHCCCEeccC-----cCCCCHHHHHHHHHHHhC-HH---HHHHHHHHHHH
Confidence 99999999999999999 6999999976 266899999999999998 66 99999999887
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=6.2e-38 Score=316.54 Aligned_cols=374 Identities=14% Similarity=0.114 Sum_probs=245.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCC------C
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIV------C 78 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~------~ 78 (493)
.|||+|+++++.||++|++.||++|+++ ||+|+|++++.+.+.+... ++.+..++........ .
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhccc
Confidence 4899999999999999999999999999 9999999988766555444 4666666532111000 0
Q ss_pred CCcchHHH-HHHHHHHhhHHHHHHHHhcCCCCcEEEEC-CcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhh
Q 011099 79 TDASLVTQ-IAVMMHESIPALRSTISAMKYRPTALIVD-LFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKV 156 (493)
Q Consensus 79 ~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~~DlVI~D-~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 156 (493)
........ +..........+.+.++++ +||+||+| ...+++..+|+++|||++.+.+....... +...+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~~ 166 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMVTLA 166 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccccccccccc
Confidence 00011111 2222233445566666665 99999999 78888889999999999998744311000 00000000000
Q ss_pred hhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhh-------hc-cCccEEEEcChhhhhHHHHHHHHhh
Q 011099 157 LQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGM-------DM-SKADGILVNTWEDLESKTLAALRDF 228 (493)
Q Consensus 157 ~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~l~~s~~~l~~~~~~~~~~~ 228 (493)
....+.. +..+ ......+..... .. ...+..++.+...++..
T Consensus 167 -------------~~~~p~~-~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-------- 216 (415)
T 3rsc_A 167 -------------GTIDPLD-LPVF--------RDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-------- 216 (415)
T ss_dssp -------------TCCCGGG-CHHH--------HHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT--------
T ss_pred -------------ccCChhh-HHHH--------HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC--------
Confidence 0000000 0000 000011111000 00 11144444444444321
Q ss_pred hhhccCCCC-CeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEc
Q 011099 229 NMLRRVAKA-PVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVR 307 (493)
Q Consensus 229 ~~~~~~~~p-~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 307 (493)
+..++ +++++||+.... .+..+|+...+++++|||++||......+.+..++++++..+.+++|.++
T Consensus 217 ----~~~~~~~~~~vGp~~~~~--------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g 284 (415)
T 3rsc_A 217 ----GDTFDDRFVFVGPCFDDR--------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLG 284 (415)
T ss_dssp ----GGGCCTTEEECCCCCCCC--------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECT
T ss_pred ----cccCCCceEEeCCCCCCc--------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeC
Confidence 10133 389999987532 23345665556778999999999776777888999999999999999886
Q ss_pred CCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhC
Q 011099 308 PPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNG 387 (493)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~G 387 (493)
...... .+ ..+++ |+.+.+|+|+.++|++++ +||||||+||++||+++|
T Consensus 285 ~~~~~~------------------~l--~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G 333 (415)
T 3rsc_A 285 GQVDPA------------------AL--GDLPP---------NVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWG 333 (415)
T ss_dssp TTSCGG------------------GG--CCCCT---------TEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTT
T ss_pred CCCChH------------------Hh--cCCCC---------cEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhC
Confidence 442100 01 22232 788889999999999999 999999999999999999
Q ss_pred CceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCC
Q 011099 388 VPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGS 467 (493)
Q Consensus 388 vP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~ 467 (493)
+|+|++|...||+.||.++ ++.|+|..+. ...++.++|.++|+++|+|++ +|++++++++.+.. .++
T Consensus 334 ~P~v~~p~~~~q~~~a~~l-~~~g~g~~~~-----~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~----~~~ 400 (415)
T 3rsc_A 334 RPLVVVPQSFDVQPMARRV-DQLGLGAVLP-----GEKADGDTLLAAVGAVAADPA---LLARVEAMRGHVRR----AGG 400 (415)
T ss_dssp CCEEECCCSGGGHHHHHHH-HHHTCEEECC-----GGGCCHHHHHHHHHHHHTCHH---HHHHHHHHHHHHHH----SCH
T ss_pred CCEEEeCCcchHHHHHHHH-HHcCCEEEcc-----cCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh----cCH
Confidence 9999999999999999999 6999999976 266899999999999999987 99999999988665 344
Q ss_pred hHHHHHHHHH
Q 011099 468 SYNSLSKIAH 477 (493)
Q Consensus 468 ~~~~~~~~~~ 477 (493)
..+.++.+.+
T Consensus 401 ~~~~~~~i~~ 410 (415)
T 3rsc_A 401 AARAADAVEA 410 (415)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.4e-37 Score=316.35 Aligned_cols=374 Identities=13% Similarity=0.117 Sum_probs=232.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCC-CCCC-------
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCID-ISGI------- 76 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~-~~~~------- 76 (493)
.|||+|++.++.||++|+++||++|+++ ||+|+|++++.+.+.+... ++.+..++... ....
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhcc
Confidence 4899999999999999999999999999 9999999998764444443 45666665321 0000
Q ss_pred -------CC-----CCcchHHHH---HHHHH---------H-hhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCe
Q 011099 77 -------VC-----TDASLVTQI---AVMMH---------E-SIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEML 131 (493)
Q Consensus 77 -------~~-----~~~~~~~~~---~~~~~---------~-~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP 131 (493)
.. ........+ ..... . ....+.++++++ +||+||+|.+.+++..+|+.+|||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCC
Confidence 00 000001111 11111 1 334455556666 999999999888889999999999
Q ss_pred EEEEecchHHHHHHHhhhcchhhhhhhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhh------ccC
Q 011099 132 KYMFIASNAWFVAVTIYAPALDKKVLQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMD------MSK 205 (493)
Q Consensus 132 ~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~ 205 (493)
++.+...+.........++.... ..+.. .. .......+....+.... +..
T Consensus 168 ~v~~~~~~~~~~~~~~~~~~~~~--------------~~~~~---~~-------~~~~~~~l~~~~~~~g~~~~~~~~~~ 223 (441)
T 2yjn_A 168 HARLLWGPDITTRARQNFLGLLP--------------DQPEE---HR-------EDPLAEWLTWTLEKYGGPAFDEEVVV 223 (441)
T ss_dssp EEEECSSCCHHHHHHHHHHHHGG--------------GSCTT---TC-------CCHHHHHHHHHHHHTTCCCCCGGGTS
T ss_pred EEEEecCCCcchhhhhhhhhhcc--------------ccccc---cc-------cchHHHHHHHHHHHcCCCCCCccccC
Confidence 99986554322111100000000 00000 00 00000011111111100 001
Q ss_pred ccEEEEcChhhhhHHHHHHHHhhhhhccCCCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCC--
Q 011099 206 ADGILVNTWEDLESKTLAALRDFNMLRRVAKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTL-- 283 (493)
Q Consensus 206 ~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~-- 283 (493)
.+..+..+.+.++.+ . .++. ..+++.... .+.++.+|++..+++++|||++||+...
T Consensus 224 ~~~~l~~~~~~~~~~------------~-~~~~-~~~~~~~~~-------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~ 282 (441)
T 2yjn_A 224 GQWTIDPAPAAIRLD------------T-GLKT-VGMRYVDYN-------GPSVVPEWLHDEPERRRVCLTLGISSRENS 282 (441)
T ss_dssp CSSEEECSCGGGSCC------------C-CCCE-EECCCCCCC-------SSCCCCGGGSSCCSSCEEEEEC--------
T ss_pred CCeEEEecCccccCC------------C-CCCC-CceeeeCCC-------CCcccchHhhcCCCCCEEEEECCCCccccc
Confidence 122333332222210 0 1111 122222111 2345678998766778999999998653
Q ss_pred -CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhh
Q 011099 284 -SSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEI 362 (493)
Q Consensus 284 -~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~l 362 (493)
..+.+..++++++..+.++||+.+..... .+ ..+|+ |+.+.+|+||.++
T Consensus 283 ~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-------------------~l--~~~~~---------~v~~~~~~~~~~l 332 (441)
T 2yjn_A 283 IGQVSIEELLGAVGDVDAEIIATFDAQQLE-------------------GV--ANIPD---------NVRTVGFVPMHAL 332 (441)
T ss_dssp --CCSTTTTHHHHHTSSSEEEECCCTTTTS-------------------SC--SSCCS---------SEEECCSCCHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEEEECCcchh-------------------hh--ccCCC---------CEEEecCCCHHHH
Confidence 23457788899999999999988643210 00 12222 7888899999999
Q ss_pred cCCCCcccccccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhccc
Q 011099 363 LAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEK 442 (493)
Q Consensus 363 L~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 442 (493)
|++++ +||||||+||++||+++|||+|++|+..||+.||+++ ++.|+|+.++ ...++.++|.++|+++|+|+
T Consensus 333 l~~ad--~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~-----~~~~~~~~l~~~i~~ll~~~ 404 (441)
T 2yjn_A 333 LPTCA--ATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALP-----VPELTPDQLRESVKRVLDDP 404 (441)
T ss_dssp GGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECC-----TTTCCHHHHHHHHHHHHHCH
T ss_pred HhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcc-----cccCCHHHHHHHHHHHhcCH
Confidence 99988 9999999999999999999999999999999999999 6999999875 26689999999999999988
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 011099 443 QGHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECEN 481 (493)
Q Consensus 443 ~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 481 (493)
+ ++++++++++.+.. ..+. ..+.+.++++..
T Consensus 405 ~---~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~~~ 435 (441)
T 2yjn_A 405 A---HRAGAARMRDDMLA----EPSP-AEVVGICEELAA 435 (441)
T ss_dssp H---HHHHHHHHHHHHHT----SCCH-HHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHc----CCCH-HHHHHHHHHHHH
Confidence 7 99999999988655 3333 344555555543
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=6.3e-37 Score=307.65 Aligned_cols=378 Identities=17% Similarity=0.156 Sum_probs=242.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCC-CCC--CCCcc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDIS-GIV--CTDAS 82 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~-~~~--~~~~~ 82 (493)
+||+|+++++.||++|++.||++|+++ ||+|+|++++.+.+.+... ++.+..++..... ... .....
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccccc
Confidence 499999999999999999999999999 9999999987665555444 4556655531110 000 01112
Q ss_pred hHHH----HHHHHHHhhHHHHHHHHhcCCCCcEEEEC-CcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhh
Q 011099 83 LVTQ----IAVMMHESIPALRSTISAMKYRPTALIVD-LFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVL 157 (493)
Q Consensus 83 ~~~~----~~~~~~~~~~~l~~ll~~~~~~~DlVI~D-~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 157 (493)
.... +........+.+.+.++++ +||+||+| .+.+++..+|+++|||++.+.+........ ...+......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~~~~- 150 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKELWKSN- 150 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-cccccccccc-
Confidence 2222 2222223345566666665 99999999 788888899999999999886443110000 0000000000
Q ss_pred hhhcccCCCcccCCCCCCCCc---ccccccccCCC-CcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhcc
Q 011099 158 QEEHVNQKKPLKIPGCSAVRF---EDTLEAFLDPY-GPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRR 233 (493)
Q Consensus 158 ~~~~~~~~~~~~~p~l~~~~~---~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 233 (493)
....+.... ..+........ ......+ .. ...+..+..+..+++.. +
T Consensus 151 ------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~-~~~~~~l~~~~~~~~~~------------~ 201 (402)
T 3ia7_A 151 ------------GQRHPADVEAVHSVLVDLLGKYGVDTPVKEY----WD-EIEGLTIVFLPKSFQPF------------A 201 (402)
T ss_dssp ------------TCCCGGGSHHHHHHHHHHHHTTTCCSCHHHH----HT-CCCSCEEESSCGGGSTT------------G
T ss_pred ------------cccChhhHHHHHHHHHHHHHHcCCCCChhhh----hc-CCCCeEEEEcChHhCCc------------c
Confidence 000000000 00000000000 0000000 00 01133444444444321 0
Q ss_pred CCCC-CeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q 011099 234 VAKA-PVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDH 312 (493)
Q Consensus 234 ~~~p-~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 312 (493)
..++ +++++||+.... .+..+|+...+++++|||++||......+.+..++++++..+.+++|.++.....
T Consensus 202 ~~~~~~~~~vGp~~~~~--------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 273 (402)
T 3ia7_A 202 ETFDERFAFVGPTLTGR--------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP 273 (402)
T ss_dssp GGCCTTEEECCCCCCC------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG
T ss_pred ccCCCCeEEeCCCCCCc--------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh
Confidence 0133 399999986532 2234566555677899999999977777788999999999998999888643210
Q ss_pred CccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceee
Q 011099 313 DVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIV 392 (493)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~ 392 (493)
. .+ ..++ .|+.+.+|+|+.++|++++ +||||||+||++||+++|+|+|+
T Consensus 274 ~------------------~~--~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~ 322 (402)
T 3ia7_A 274 A------------------VL--GPLP---------PNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVL 322 (402)
T ss_dssp G------------------GG--CSCC---------TTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEE
T ss_pred h------------------hh--CCCC---------CcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEE
Confidence 0 00 1222 2788889999999999999 99999999999999999999999
Q ss_pred ccc-chhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHH
Q 011099 393 WPL-YAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNS 471 (493)
Q Consensus 393 ~P~-~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~ 471 (493)
+|. ..||+.||.++ ++.|+|..+. .+.++.++|.++|+++|+|++ +|++++++++.+.. .++..+.
T Consensus 323 ~p~~~~~q~~~a~~~-~~~g~g~~~~-----~~~~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~~----~~~~~~~ 389 (402)
T 3ia7_A 323 VPHFATEAAPSAERV-IELGLGSVLR-----PDQLEPASIREAVERLAADSA---VRERVRRMQRDILS----SGGPARA 389 (402)
T ss_dssp CGGGCGGGHHHHHHH-HHTTSEEECC-----GGGCSHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT----SCHHHHH
T ss_pred eCCCcccHHHHHHHH-HHcCCEEEcc-----CCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHhh----CChHHHH
Confidence 999 99999999999 6999999976 266899999999999999887 99999998888544 4444444
Q ss_pred HHHHHHH
Q 011099 472 LSKIAHE 478 (493)
Q Consensus 472 ~~~~~~~ 478 (493)
++.+.+.
T Consensus 390 ~~~i~~~ 396 (402)
T 3ia7_A 390 ADEVEAY 396 (402)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444333
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.6e-35 Score=295.70 Aligned_cols=353 Identities=14% Similarity=0.080 Sum_probs=237.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCC-----------C
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDI-----------S 74 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~-----------~ 74 (493)
|||++++.++.||++|++.||++|+++ ||+|++++++.+.+.+... ++.+..++.... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCc
Confidence 689999999999999999999999999 9999999988653333333 455555543210 0
Q ss_pred CCCCCCcchHHHH-----HHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhh
Q 011099 75 GIVCTDASLVTQI-----AVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYA 149 (493)
Q Consensus 75 ~~~~~~~~~~~~~-----~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 149 (493)
............+ ..........+.+++++. +||+||+|.+.+++..+|+.+|||++.+...+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 71 EAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 0000110111111 111223345566667766 9999999988888888999999999987533200
Q ss_pred cchhhhhhhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhh--hccCccEEEEcChhhhhHHHHHHHHh
Q 011099 150 PALDKKVLQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGM--DMSKADGILVNTWEDLESKTLAALRD 227 (493)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~s~~~l~~~~~~~~~~ 227 (493)
...+ . ..+ ....+....... .....+.+++++...++.+
T Consensus 141 --------------------~~~~-----~---~~~----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------- 181 (384)
T 2p6p_A 141 --------------------ADGI-----H---PGA----DAELRPELSELGLERLPAPDLFIDICPPSLRPA------- 181 (384)
T ss_dssp --------------------CTTT-----H---HHH----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-------
T ss_pred --------------------cchh-----h---HHH----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-------
Confidence 0000 0 000 000111111110 0011456777877666532
Q ss_pred hhhhccCCCC--CeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCC-----CHHHHHHHHHHHHhCCC
Q 011099 228 FNMLRRVAKA--PVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTL-----SSKQTMELAWGLEQSKQ 300 (493)
Q Consensus 228 ~~~~~~~~~p--~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~al~~~~~ 300 (493)
+ .++ ++.+++ . . .+.++.+|++..+++++|||++||.... ..+.+..++++++..+.
T Consensus 182 -----~-~~~~~~~~~~~-~--~-------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~ 245 (384)
T 2p6p_A 182 -----N-AAPARMMRHVA-T--S-------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDV 245 (384)
T ss_dssp -----T-SCCCEECCCCC-C--C-------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTC
T ss_pred -----C-CCCCCceEecC-C--C-------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCc
Confidence 0 111 233332 1 1 2235667887655667999999998764 44678899999999999
Q ss_pred cEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHH
Q 011099 301 RFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNST 380 (493)
Q Consensus 301 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~ 380 (493)
+++|+.+... .+.+. .. ..|+.+ +|+||.++|++++ +||||||+||+
T Consensus 246 ~~~~~~g~~~----------------------------~~~l~-~~-~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~ 292 (384)
T 2p6p_A 246 ELIVAAPDTV----------------------------AEALR-AE-VPQARV-GWTPLDVVAPTCD--LLVHHAGGVST 292 (384)
T ss_dssp EEEEECCHHH----------------------------HHHHH-HH-CTTSEE-ECCCHHHHGGGCS--EEEECSCTTHH
T ss_pred EEEEEeCCCC----------------------------HHhhC-CC-CCceEE-cCCCHHHHHhhCC--EEEeCCcHHHH
Confidence 9999874210 01111 12 237888 9999999999988 99999999999
Q ss_pred HHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q 011099 381 MESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQK 460 (493)
Q Consensus 381 ~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 460 (493)
+||+++|+|+|++|..+||+.||.++ ++.|+|+.++ ...++.++|.++|+++|.|++ +|++++++++.++.
T Consensus 293 ~Ea~~~G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~-----~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 293 LTGLSAGVPQLLIPKGSVLEAPARRV-ADYGAAIALL-----PGEDSTEAIADSCQELQAKDT---YARRAQDLSREISG 363 (384)
T ss_dssp HHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECC-----TTCCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT
T ss_pred HHHHHhCCCEEEccCcccchHHHHHH-HHCCCeEecC-----cCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh
Confidence 99999999999999999999999999 6999999875 256799999999999999877 99999999998766
Q ss_pred HhhcCCChHHHHHHHHHHHH
Q 011099 461 ALINGGSSYNSLSKIAHECE 480 (493)
Q Consensus 461 a~~~~g~~~~~~~~~~~~~~ 480 (493)
. +| . ..+.+.++.+.
T Consensus 364 ~---~~-~-~~~~~~i~~~~ 378 (384)
T 2p6p_A 364 M---PL-P-ATVVTALEQLA 378 (384)
T ss_dssp S---CC-H-HHHHHHHHHHH
T ss_pred C---CC-H-HHHHHHHHHHh
Confidence 2 33 3 34444445444
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.8e-35 Score=299.86 Aligned_cols=362 Identities=18% Similarity=0.188 Sum_probs=235.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCC-C--Cc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVC-T--DA 81 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~-~--~~ 81 (493)
.|||+|++.++.||++|++.|+++|+++ ||+|+++++..+.+.+.. .++.+..++......... . ..
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGCS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccch
Confidence 3799999999999999999999999999 999999998865333222 256777666421101000 0 01
Q ss_pred chHHHH---HHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhh
Q 011099 82 SLVTQI---AVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQ 158 (493)
Q Consensus 82 ~~~~~~---~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (493)
+....+ ..........+.+++++. +||+||+|.+.+++..+|+++|||++.+++.+...... ...+ .... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~--~~~~-~ 150 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEV--AEPM-W 150 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHT--HHHH-H
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-cccc--ccch-h
Confidence 221211 122233445566666665 99999999887888899999999999988654210000 0000 0000 0
Q ss_pred hhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHh-------hhccCccEEEEcChhhhhHHHHHHHHhhhhh
Q 011099 159 EEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVG-------MDMSKADGILVNTWEDLESKTLAALRDFNML 231 (493)
Q Consensus 159 ~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~ 231 (493)
... ...++. .. +. .....+.... ......+.+++++...++...
T Consensus 151 ~~~------~~~~~~--------~~-~~----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~---------- 201 (430)
T 2iyf_A 151 REP------RQTERG--------RA-YY----ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA---------- 201 (430)
T ss_dssp HHH------HHSHHH--------HH-HH----HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----------
T ss_pred hhh------ccchHH--------HH-HH----HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----------
Confidence 000 000000 00 00 0000000000 001134667888877776421
Q ss_pred ccCCCCC-eEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhC-CCcEEEEEcCC
Q 011099 232 RRVAKAP-VYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQS-KQRFIWVVRPP 309 (493)
Q Consensus 232 ~~~~~p~-~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~ 309 (493)
+...++ ++++||+.... .+..+|....+++++|||++||......+.+..++++++.. +.+++|.++..
T Consensus 202 -~~~~~~~v~~vG~~~~~~--------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~ 272 (430)
T 2iyf_A 202 -DRVDEDVYTFVGACQGDR--------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRK 272 (430)
T ss_dssp -GGSCTTTEEECCCCC-------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC--
T ss_pred -ccCCCccEEEeCCcCCCC--------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 001235 99999865421 11235665555678999999998855667788899999886 78888888643
Q ss_pred CCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCc
Q 011099 310 LDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVP 389 (493)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP 389 (493)
.... .+ ..++ .|+.+.+|+||.++|++++ +||||||+||++||+++|+|
T Consensus 273 ~~~~------------------~l--~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P 321 (430)
T 2iyf_A 273 VTPA------------------EL--GELP---------DNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATP 321 (430)
T ss_dssp -CGG------------------GG--CSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCC
T ss_pred CChH------------------Hh--ccCC---------CCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCC
Confidence 2100 00 1122 2788889999999999999 99999999999999999999
Q ss_pred eeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q 011099 390 MIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQK 460 (493)
Q Consensus 390 ~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 460 (493)
+|++|..+||+.|+.++ ++.|+|..+. ...++.++|.++|+++++|++ ++++++++++.+..
T Consensus 322 ~i~~p~~~~q~~~a~~~-~~~g~g~~~~-----~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 322 MIAVPQAVDQFGNADML-QGLGVARKLA-----TEEATADLLRETALALVDDPE---VARRLRRIQAEMAQ 383 (430)
T ss_dssp EEECCCSHHHHHHHHHH-HHTTSEEECC-----CC-CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHH
T ss_pred EEECCCccchHHHHHHH-HHcCCEEEcC-----CCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh
Confidence 99999999999999999 6899999875 256789999999999998876 88888888887665
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.6e-34 Score=286.54 Aligned_cols=350 Identities=15% Similarity=0.175 Sum_probs=230.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCC-C----------
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCID-I---------- 73 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~-~---------- 73 (493)
.|||+|++.++.||++|++.||++|+++ ||+|+++++ .+.+.+... ++.+..++... .
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccC
Confidence 5899999999999999999999999999 999999999 665544443 56666665310 0
Q ss_pred ----------CCCCCCCcchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHH
Q 011099 74 ----------SGIVCTDASLVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFV 143 (493)
Q Consensus 74 ----------~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~ 143 (493)
... .........+..........+.++++++ +||+||+|...+++..+|+.+|||++.+........
T Consensus 89 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 89 NPRFAETVATRPA-IDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR 165 (398)
T ss_dssp CHHHHHTGGGSCC-CSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT
T ss_pred CccccccccCChh-hhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc
Confidence 000 1111222333444445667788888888 999999998888888999999999988653321000
Q ss_pred HHHhhhcchhhhhhhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhh-hccCccEEEEcChhhhhHHHH
Q 011099 144 AVTIYAPALDKKVLQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGM-DMSKADGILVNTWEDLESKTL 222 (493)
Q Consensus 144 ~~~~~~p~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~l~~~~~ 222 (493)
... ..... ......+... ........+......+...
T Consensus 166 -------~~~-----------------------------~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 203 (398)
T 3oti_A 166 -------GMH-----------------------------RSIAS----FLTDLMDKHQVSLPEPVATIESFPPSLLLE-- 203 (398)
T ss_dssp -------THH-----------------------------HHHHT----TCHHHHHHTTCCCCCCSEEECSSCGGGGTT--
T ss_pred -------chh-----------------------------hHHHH----HHHHHHHHcCCCCCCCCeEEEeCCHHHCCC--
Confidence 000 00000 0001111100 0011122222222222110
Q ss_pred HHHHhhhhhccCCCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCC--CHHHHHHHHHHHHhCCC
Q 011099 223 AALRDFNMLRRVAKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTL--SSKQTMELAWGLEQSKQ 300 (493)
Q Consensus 223 ~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~~~al~~~~~ 300 (493)
... ...++.++ |. . .+....+|+...+++++|||++||.... ..+.+..++++++..+.
T Consensus 204 --------~~~-~~~~~~~~-~~--~-------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~ 264 (398)
T 3oti_A 204 --------AEP-EGWFMRWV-PY--G-------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA 264 (398)
T ss_dssp --------SCC-CSBCCCCC-CC--C-------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS
T ss_pred --------CCC-CCCCcccc-CC--C-------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC
Confidence 000 00111111 00 0 2344566776666778999999998442 45668889999999999
Q ss_pred cEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHH
Q 011099 301 RFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNST 380 (493)
Q Consensus 301 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~ 380 (493)
+++|+.+..... .+ ..+++ |+.+.+|+|+.++|++++ +||||||.||+
T Consensus 265 ~~v~~~g~~~~~-------------------~l--~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~ 312 (398)
T 3oti_A 265 DFVLALGDLDIS-------------------PL--GTLPR---------NVRAVGWTPLHTLLRTCT--AVVHHGGGGTV 312 (398)
T ss_dssp EEEEECTTSCCG-------------------GG--CSCCT---------TEEEESSCCHHHHHTTCS--EEEECCCHHHH
T ss_pred EEEEEECCcChh-------------------hh--ccCCC---------cEEEEccCCHHHHHhhCC--EEEECCCHHHH
Confidence 999998654310 01 22233 788889999999999999 99999999999
Q ss_pred HHHHHhCCceeecccchhcchhh--HhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 011099 381 MESIVNGVPMIVWPLYAEQKMNA--TMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSA 458 (493)
Q Consensus 381 ~eal~~GvP~l~~P~~~DQ~~na--~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 458 (493)
+||+++|+|+|++|+..||+.|| .++ ++.|+|+.++ ....+++.|. ++|+|++ +|++++++++.+
T Consensus 313 ~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~-----~~~~~~~~l~----~ll~~~~---~~~~~~~~~~~~ 379 (398)
T 3oti_A 313 MTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVST-----SDKVDADLLR----RLIGDES---LRTAAREVREEM 379 (398)
T ss_dssp HHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEECC-----GGGCCHHHHH----HHHHCHH---HHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeC-----CCCCCHHHHH----HHHcCHH---HHHHHHHHHHHH
Confidence 99999999999999999999999 998 6999999976 2556777776 7888877 999999999886
Q ss_pred HHHhhcCCChHHHHHHHHHHH
Q 011099 459 QKALINGGSSYNSLSKIAHEC 479 (493)
Q Consensus 459 ~~a~~~~g~~~~~~~~~~~~~ 479 (493)
.. ..+. ..+.+.++++
T Consensus 380 ~~----~~~~-~~~~~~l~~l 395 (398)
T 3oti_A 380 VA----LPTP-AETVRRIVER 395 (398)
T ss_dssp HT----SCCH-HHHHHHHHHH
T ss_pred Hh----CCCH-HHHHHHHHHH
Confidence 55 3333 3444444444
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=5.8e-35 Score=293.13 Aligned_cols=343 Identities=14% Similarity=0.108 Sum_probs=214.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCC-C--------CCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCI-D--------ISG 75 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~-~--------~~~ 75 (493)
+|||+|++.++.||++|++.|+++|+++ ||+|++++++.+.+.+...++. +..++.. . ...
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~~~~~~~~~G~~---------~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASENMGPTVTGAGLP---------FAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGGGHHHHHHTTCC---------EEEEESSCCHHHHHSBCTTS
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHHHHHHHHhCCCe---------eEecCCccchHhhhhhhccC
Confidence 5999999999999999999999999999 9999999998766555555443 3333210 0 000
Q ss_pred C---CC-CCcchH----HHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHHHHHh
Q 011099 76 I---VC-TDASLV----TQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFVAVTI 147 (493)
Q Consensus 76 ~---~~-~~~~~~----~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~ 147 (493)
. .. ...... ..+..........+.++++++ +||+||+|...+++..+|+.+|||++.+............
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~ 162 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKS 162 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhH
Confidence 0 00 000111 112222334445677777777 9999999988888889999999999987654311000000
Q ss_pred hhcchhhhhhhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhh--hccCccEEEEcChhhhhHHHHHHH
Q 011099 148 YAPALDKKVLQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGM--DMSKADGILVNTWEDLESKTLAAL 225 (493)
Q Consensus 148 ~~p~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~s~~~l~~~~~~~~ 225 (493)
. .... .....+... ........+..+...+....
T Consensus 163 ~---~~~~-------------------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 198 (398)
T 4fzr_A 163 A---GVGE-------------------------------------LAPELAELGLTDFPDPLLSIDVCPPSMEAQP---- 198 (398)
T ss_dssp H---HHHH-------------------------------------THHHHHTTTCSSCCCCSEEEECSCGGGC-------
T ss_pred H---HHHH-------------------------------------HHHHHHHcCCCCCCCCCeEEEeCChhhCCCC----
Confidence 0 0000 000000000 00111223333333332210
Q ss_pred HhhhhhccCCCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCC--------CHHHHHHHHHHHHh
Q 011099 226 RDFNMLRRVAKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTL--------SSKQTMELAWGLEQ 297 (493)
Q Consensus 226 ~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~~~~al~~ 297 (493)
. . ...++.++++.. .+.++.+|+...+++++|||++||.... ..+.+..++++++.
T Consensus 199 -~-----~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 199 -K-----P-GTTKMRYVPYNG---------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp -------C-CCEECCCCCCCC---------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred -C-----C-CCCCeeeeCCCC---------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 0 0 000122222110 1234556766555677999999998543 23458889999999
Q ss_pred CCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCc
Q 011099 298 SKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGW 377 (493)
Q Consensus 298 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~ 377 (493)
.+.+++|+.+..... .+ ..++ .|+.+.+|+|+.++|++++ +||||||.
T Consensus 263 ~~~~~v~~~~~~~~~-------------------~l--~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~gG~ 310 (398)
T 4fzr_A 263 LGFEVVVAVSDKLAQ-------------------TL--QPLP---------EGVLAAGQFPLSAIMPACD--VVVHHGGH 310 (398)
T ss_dssp GTCEEEECCCC-----------------------------CC---------TTEEEESCCCHHHHGGGCS--EEEECCCH
T ss_pred CCCEEEEEeCCcchh-------------------hh--ccCC---------CcEEEeCcCCHHHHHhhCC--EEEecCCH
Confidence 999999988544210 00 1222 2788889999999999999 99999999
Q ss_pred hHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011099 378 NSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHS 457 (493)
Q Consensus 378 gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~ 457 (493)
||++||+++|+|+|++|...||+.||.++ ++.|+|+.++ ...+++++|.++|+++|+|++ +|++++++++.
T Consensus 311 ~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~-----~~~~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~ 381 (398)
T 4fzr_A 311 GTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVP-----WEQAGVESVLAACARIRDDSS---YVGNARRLAAE 381 (398)
T ss_dssp HHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC------------CHHHHHHHHHHCTH---HHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecC-----cccCCHHHHHHHHHHHHhCHH---HHHHHHHHHHH
Confidence 99999999999999999999999999999 6999999976 256789999999999999988 99999988887
Q ss_pred HHH
Q 011099 458 AQK 460 (493)
Q Consensus 458 ~~~ 460 (493)
+..
T Consensus 382 ~~~ 384 (398)
T 4fzr_A 382 MAT 384 (398)
T ss_dssp HTT
T ss_pred HHc
Confidence 544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5.7e-33 Score=277.92 Aligned_cols=356 Identities=14% Similarity=0.099 Sum_probs=226.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEc-CCC-CCC----CCCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLL-PCI-DIS----GIVC 78 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l-~~~-~~~----~~~~ 78 (493)
+|||+|++.++.||++|++.|+++|+++ ||+|+++++..+.+.+...++. +..+ ... ... ....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~~~~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPELQATAHGAGLT---------TAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHHHHHHHHHBTCE---------EEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChhhHHHHHhCCCc---------eeeecCCccchhhhhhhccc
Confidence 4899999999999999999999999999 9999999987655545555443 3333 110 000 0000
Q ss_pred --------CC-cchHHHHHHHHHHh-------hHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHH
Q 011099 79 --------TD-ASLVTQIAVMMHES-------IPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWF 142 (493)
Q Consensus 79 --------~~-~~~~~~~~~~~~~~-------~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~ 142 (493)
.. ......+....... ...+.++++++ +||+||+|...+.+..+|+.+|||++.+.......
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 71 FPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp SCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred ccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 00 11111222222233 56677888887 99999999888888889999999998875433110
Q ss_pred HHHHhhhcchhhhhhhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhh--ccCccEEEEcChhhhhHH
Q 011099 143 VAVTIYAPALDKKVLQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMD--MSKADGILVNTWEDLESK 220 (493)
Q Consensus 143 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~s~~~l~~~ 220 (493)
.... .+... .+.......... ....+..+..+..+++..
T Consensus 149 ~~~~--~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 149 AGPF--SDRAH-------------------------------------ELLDPVCRHHGLTGLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp TTHH--HHHHH-------------------------------------HHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT
T ss_pred cccc--cchHH-------------------------------------HHHHHHHHHcCCCCCCCCceEEEecChhhcCC
Confidence 0000 00000 000000011000 011122333332222210
Q ss_pred HHHHHHhhhhhccCCCCCeEEeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCC--CC-HHHHHHHHHHHHh
Q 011099 221 TLAALRDFNMLRRVAKAPVYPVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGT--LS-SKQTMELAWGLEQ 297 (493)
Q Consensus 221 ~~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~--~~-~~~~~~~~~al~~ 297 (493)
. .. ...++.++ |. . .+.....|+...+++++|||++||... .. .+.+..++++ +.
T Consensus 190 ~----------~~-~~~~~~~~-p~-----~----~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~ 247 (391)
T 3tsa_A 190 D----------AP-QGAPVQYV-PY-----N----GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TE 247 (391)
T ss_dssp T----------SC-CCEECCCC-CC-----C----CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT
T ss_pred C----------CC-ccCCeeee-cC-----C----CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc
Confidence 0 00 00012222 11 0 233455677665677899999999732 23 5667788888 87
Q ss_pred C-CCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCC
Q 011099 298 S-KQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCG 376 (493)
Q Consensus 298 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG 376 (493)
. +.+++|+.+..... .+ ..++ .|+.+.+|+|+.++|++++ +||||||
T Consensus 248 ~p~~~~v~~~~~~~~~-------------------~l--~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G 295 (391)
T 3tsa_A 248 LPGVEAVIAVPPEHRA-------------------LL--TDLP---------DNARIAESVPLNLFLRTCE--LVICAGG 295 (391)
T ss_dssp STTEEEEEECCGGGGG-------------------GC--TTCC---------TTEEECCSCCGGGTGGGCS--EEEECCC
T ss_pred CCCeEEEEEECCcchh-------------------hc--ccCC---------CCEEEeccCCHHHHHhhCC--EEEeCCC
Confidence 7 77888887533110 00 1122 2788889999999998888 9999999
Q ss_pred chHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCC--CccchHHHHHHHHHHhcccchHHHHHHHHHH
Q 011099 377 WNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEK--SVVERGEIEMMVRRIVAEKQGHAIRNRVEEL 454 (493)
Q Consensus 377 ~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~--~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l 454 (493)
.||++||+++|+|+|++|+..||+.|+.++ ++.|+|..+. . ...+.+.|.++|+++|+|++ +|++++++
T Consensus 296 ~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~-----~~~~~~~~~~l~~ai~~ll~~~~---~~~~~~~~ 366 (391)
T 3tsa_A 296 SGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLP-----DEQAQSDHEQFTDSIATVLGDTG---FAAAAIKL 366 (391)
T ss_dssp HHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECC-----SHHHHTCHHHHHHHHHHHHTCTH---HHHHHHHH
T ss_pred HHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecC-----cccccCCHHHHHHHHHHHHcCHH---HHHHHHHH
Confidence 999999999999999999999999999999 6999999975 2 34789999999999999988 99999888
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHH
Q 011099 455 KHSAQKALINGGSSYNSLSKIAHEC 479 (493)
Q Consensus 455 ~~~~~~a~~~~g~~~~~~~~~~~~~ 479 (493)
++.+.. ..+.. .+.+.++++
T Consensus 367 ~~~~~~----~~~~~-~~~~~i~~~ 386 (391)
T 3tsa_A 367 SDEITA----MPHPA-ALVRTLENT 386 (391)
T ss_dssp HHHHHT----SCCHH-HHHHHHHHC
T ss_pred HHHHHc----CCCHH-HHHHHHHHH
Confidence 887544 44443 344444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=4e-30 Score=259.03 Aligned_cols=353 Identities=14% Similarity=0.135 Sum_probs=227.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCC------------
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCI------------ 71 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~------------ 71 (493)
.+|||+|++.++.||++|++.|+++|+++ ||+|+++++..+.+.+... ++.+..++..
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhh
Confidence 36999999999999999999999999999 9999999987543333332 5666666530
Q ss_pred -CCCCCCCC------CcchHHHHHHH-HHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHHHH
Q 011099 72 -DISGIVCT------DASLVTQIAVM-MHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAWFV 143 (493)
Q Consensus 72 -~~~~~~~~------~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~ 143 (493)
..... +. .......+... .......+.++++++ +||+||+|...+++..+|+.+|||++.+........
T Consensus 89 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 165 (412)
T 3otg_A 89 FDTDSP-EGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPD 165 (412)
T ss_dssp HSCSCC-TTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCS
T ss_pred hcccCC-ccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccCch
Confidence 00000 00 01111122222 233446777888887 999999998778788899999999988654421100
Q ss_pred HHHhhhcchhhhhhhhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHH
Q 011099 144 AVTIYAPALDKKVLQEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLA 223 (493)
Q Consensus 144 ~~~~~~p~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 223 (493)
............. . .-.+++.... ......+.++..+...++....
T Consensus 166 ~~~~~~~~~~~~~-~----------~~~g~~~~~~----------------------~~~~~~d~~i~~~~~~~~~~~~- 211 (412)
T 3otg_A 166 DLTRSIEEEVRGL-A----------QRLGLDLPPG----------------------RIDGFGNPFIDIFPPSLQEPEF- 211 (412)
T ss_dssp HHHHHHHHHHHHH-H----------HHTTCCCCSS----------------------CCGGGGCCEEECSCGGGSCHHH-
T ss_pred hhhHHHHHHHHHH-H----------HHcCCCCCcc----------------------cccCCCCeEEeeCCHHhcCCcc-
Confidence 0000000000000 0 0000000000 0011233344444333332110
Q ss_pred HHHhhhhhccCCCCCeEEeccccCCCCCCCCccccccccc-ccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011099 224 ALRDFNMLRRVAKAPVYPVGPLARSVASSPVSGSHVVLDW-LDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRF 302 (493)
Q Consensus 224 ~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 302 (493)
.. ......+-+.... ......+| ....+++++||+++||......+.+..++++++..+.++
T Consensus 212 ---~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~ 274 (412)
T 3otg_A 212 ---RA-------RPRRHELRPVPFA-------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADV 274 (412)
T ss_dssp ---HT-------CTTEEECCCCCCC-------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEE
T ss_pred ---cC-------CCCcceeeccCCC-------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEE
Confidence 00 0111111111110 12234456 232346679999999987666777889999999999999
Q ss_pred EEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHH
Q 011099 303 IWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTME 382 (493)
Q Consensus 303 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~e 382 (493)
+|+.+...... .+ ..+++ |+.+.+|+|+.++|++++ +||+|||+||++|
T Consensus 275 ~~~~g~~~~~~------------------~l--~~~~~---------~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~E 323 (412)
T 3otg_A 275 LVASGPSLDVS------------------GL--GEVPA---------NVRLESWVPQAALLPHVD--LVVHHGGSGTTLG 323 (412)
T ss_dssp EEECCSSCCCT------------------TC--CCCCT---------TEEEESCCCHHHHGGGCS--EEEESCCHHHHHH
T ss_pred EEEECCCCChh------------------hh--ccCCC---------cEEEeCCCCHHHHHhcCc--EEEECCchHHHHH
Confidence 99886543100 01 12222 788889999999999999 9999999999999
Q ss_pred HHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q 011099 383 SIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQK 460 (493)
Q Consensus 383 al~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 460 (493)
|+++|+|+|++|...||..|+.++ ++.|+|..+. ....++++|.++|.++|+|++ +|+++.+.++.+..
T Consensus 324 a~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~-----~~~~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 324 ALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLL-----PDNISPDSVSGAAKRLLAEES---YRAGARAVAAEIAA 392 (412)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECC-----GGGCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHH
T ss_pred HHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecC-----cccCCHHHHHHHHHHHHhCHH---HHHHHHHHHHHHhc
Confidence 999999999999999999999999 6999999976 256799999999999999887 88888888877555
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=6.4e-28 Score=238.33 Aligned_cols=310 Identities=15% Similarity=0.076 Sum_probs=189.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchHHH
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLVTQ 86 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 86 (493)
+|+|...|+-||++|.++||++|+++ ||+|+|+++.... +...++. .++.++.++....... . ..+....
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g~---e~~~v~~----~g~~~~~i~~~~~~~~-~-~~~~~~~ 73 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRGI---ENDLVPK----AGLPLHLIQVSGLRGK-G-LKSLVKA 73 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSST---HHHHTGG----GTCCEEECC----------------C
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCchH---hhchhhh----cCCcEEEEECCCcCCC-C-HHHHHHH
Confidence 69998877779999999999999999 9999999977532 2233332 2566776664333211 0 0111111
Q ss_pred HHHHHHHhhHHHHHHHHhcCCCCcEEEECCcch--hHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhhhcccC
Q 011099 87 IAVMMHESIPALRSTISAMKYRPTALIVDLFGT--EAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQEEHVNQ 164 (493)
Q Consensus 87 ~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~--~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 164 (493)
..... .....+..++++. +||+||++.... ++..+|+.+|||+++.-..
T Consensus 74 ~~~~~-~~~~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n-------------------------- 124 (365)
T 3s2u_A 74 PLELL-KSLFQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN-------------------------- 124 (365)
T ss_dssp HHHHH-HHHHHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS--------------------------
T ss_pred HHHHH-HHHHHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc--------------------------
Confidence 11221 2233556778887 999999985443 4556899999998874211
Q ss_pred CCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCCCCCeEEecc
Q 011099 165 KKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVAKAPVYPVGP 244 (493)
Q Consensus 165 ~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~p~~~~vGp 244 (493)
.+||+ .+.+. .+.++.++ .++++..+ ...+.+++|+
T Consensus 125 ----~~~G~-------------------~nr~l-----~~~a~~v~-~~~~~~~~---------------~~~k~~~~g~ 160 (365)
T 3s2u_A 125 ----AVAGT-------------------ANRSL-----APIARRVC-EAFPDTFP---------------ASDKRLTTGN 160 (365)
T ss_dssp ----SSCCH-------------------HHHHH-----GGGCSEEE-ESSTTSSC---------------C---CEECCC
T ss_pred ----hhhhh-------------------HHHhh-----ccccceee-eccccccc---------------CcCcEEEECC
Confidence 11221 00000 01122222 22221110 1224777886
Q ss_pred ccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCC----CcEEEEEcCCCCCCccccccc
Q 011099 245 LARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSK----QRFIWVVRPPLDHDVFDSYLT 320 (493)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~~ 320 (493)
........ ... ......+++++|+|..||.+... ..+.+.++++.+. ..++|+.+...
T Consensus 161 pvr~~~~~----~~~--~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~---------- 222 (365)
T 3s2u_A 161 PVRGELFL----DAH--ARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH---------- 222 (365)
T ss_dssp CCCGGGCC----CTT--SSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT----------
T ss_pred CCchhhcc----chh--hhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc----------
Confidence 65542211 111 11112235568999999976532 2234556666553 35666664321
Q ss_pred cCCCCCcccccccccCCCchhHHhhh--CCCceeeccCCChh-hhcCCCCcccccccCCchHHHHHHHhCCceeecccc-
Q 011099 321 AGSGALNTAEGALDYHYLPEGFLIRT--RDVGLVVPMWAPQP-EILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLY- 396 (493)
Q Consensus 321 ~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~~~pq~-~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~- 396 (493)
.+...+.. .+.++.+.+|+++. +++..++ ++|||+|.+|++|++++|+|+|++|+.
T Consensus 223 ------------------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~ 282 (365)
T 3s2u_A 223 ------------------AEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPH 282 (365)
T ss_dssp ------------------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC---
T ss_pred ------------------cccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCC
Confidence 11222221 12356677999875 6999999 999999999999999999999999974
Q ss_pred ---hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccc
Q 011099 397 ---AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 397 ---~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
.||..||+.+ ++.|+|..++ +..+|+++|.++|.++|.|++
T Consensus 283 ~~~~~Q~~NA~~l-~~~G~a~~l~-----~~~~~~~~L~~~i~~ll~d~~ 326 (365)
T 3s2u_A 283 AIDDHQTRNAEFL-VRSGAGRLLP-----QKSTGAAELAAQLSEVLMHPE 326 (365)
T ss_dssp --CCHHHHHHHHH-HTTTSEEECC-----TTTCCHHHHHHHHHHHHHCTH
T ss_pred CCCcHHHHHHHHH-HHCCCEEEee-----cCCCCHHHHHHHHHHHHCCHH
Confidence 5899999999 6999999976 377899999999999999875
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=4.9e-27 Score=206.34 Aligned_cols=162 Identities=23% Similarity=0.394 Sum_probs=136.5
Q ss_pred ccccccccccCCCCCeEEEEEcCCCC-CCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccc
Q 011099 256 GSHVVLDWLDKQPHESVIYVSFGSGG-TLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALD 334 (493)
Q Consensus 256 ~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (493)
++.++.+|++..+++++|||++||.. ....+.+..++++++..+.+++|+.+....
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~----------------------- 63 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP----------------------- 63 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----------------------
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----------------------
Confidence 77889999987667789999999985 456677889999999999999999854321
Q ss_pred cCCCchhHHhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeE
Q 011099 335 YHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAI 414 (493)
Q Consensus 335 ~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~ 414 (493)
..+++ |+.+.+|+||.++|.|+++.+||||||+||++||+++|+|+|++|...||..||.++ ++.|+|+
T Consensus 64 -~~~~~---------~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~ 132 (170)
T 2o6l_A 64 -DTLGL---------NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAV 132 (170)
T ss_dssp -TTCCT---------TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEE
T ss_pred -ccCCC---------cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeE
Confidence 22232 788889999999997766669999999999999999999999999999999999998 6999999
Q ss_pred EeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 011099 415 RSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQ 459 (493)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 459 (493)
.++ ...++.++|.++|++++.|++ ||++++++++.++
T Consensus 133 ~~~-----~~~~~~~~l~~~i~~ll~~~~---~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 133 RVD-----FNTMSSTDLLNALKRVINDPS---YKENVMKLSRIQH 169 (170)
T ss_dssp ECC-----TTTCCHHHHHHHHHHHHHCHH---HHHHHHHHC----
T ss_pred Eec-----cccCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHhh
Confidence 976 266899999999999998877 9999999988764
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.82 E-value=3.2e-18 Score=168.85 Aligned_cols=338 Identities=12% Similarity=0.069 Sum_probs=198.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchH
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLV 84 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (493)
+|+|++++.+..||..+++.|+++|+++ ||+|++++...... ...+.. .++.+..++...... ....
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~---~~~~~~----~g~~~~~~~~~~~~~-----~~~~ 72 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRME---ADLVPK----HGIEIDFIRISGLRG-----KGIK 72 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTH---HHHGGG----GTCEEEECCCCCCTT-----CCHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCcch---hhhccc----cCCceEEecCCccCc-----CccH
Confidence 4899999988779999999999999999 99999999875321 111111 156666665432211 1111
Q ss_pred HHHH--HHHHHhhHHHHHHHHhcCCCCcEEEECCcc--hhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhhh
Q 011099 85 TQIA--VMMHESIPALRSTISAMKYRPTALIVDLFG--TEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQEE 160 (493)
Q Consensus 85 ~~~~--~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~--~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (493)
..+. .........+..++++. +||+|+++... ..+..++..+|+|++......
T Consensus 73 ~~~~~~~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~--------------------- 129 (364)
T 1f0k_A 73 ALIAAPLRIFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG--------------------- 129 (364)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS---------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC---------------------
Confidence 1110 00112334566777776 99999998643 345668889999988643211
Q ss_pred cccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCCCCCeE
Q 011099 161 HVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVAKAPVY 240 (493)
Q Consensus 161 ~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~p~~~ 240 (493)
.++ ... +. ..+.++.+++.+... .|++.
T Consensus 130 ---------~~~-------------------~~~---~~--~~~~~d~v~~~~~~~-------------------~~~~~ 157 (364)
T 1f0k_A 130 ---------IAG-------------------LTN---KW--LAKIATKVMQAFPGA-------------------FPNAE 157 (364)
T ss_dssp ---------SCC-------------------HHH---HH--HTTTCSEEEESSTTS-------------------SSSCE
T ss_pred ---------CCc-------------------HHH---HH--HHHhCCEEEecChhh-------------------cCCce
Confidence 000 000 00 112234444432111 12344
Q ss_pred EeccccCCCCCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhC--CCcEEEEEcCCCCCCccccc
Q 011099 241 PVGPLARSVASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQS--KQRFIWVVRPPLDHDVFDSY 318 (493)
Q Consensus 241 ~vGp~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~ 318 (493)
.+|......... .+. ..+.+...++++++++..|+... ......++++++.+ +.++++.++...
T Consensus 158 ~i~n~v~~~~~~---~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~-------- 223 (364)
T 1f0k_A 158 VVGNPVRTDVLA---LPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS-------- 223 (364)
T ss_dssp ECCCCCCHHHHT---SCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------
T ss_pred EeCCccchhhcc---cch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------
Confidence 555432211000 000 00111112344577778888643 34445555666654 345566664321
Q ss_pred cccCCCCCcccccccccCCCchhHHhh---hCCCceeeccCCC-hhhhcCCCCcccccccCCchHHHHHHHhCCceeecc
Q 011099 319 LTAGSGALNTAEGALDYHYLPEGFLIR---TRDVGLVVPMWAP-QPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWP 394 (493)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~lp~~~~~~---~~~~~~~~~~~~p-q~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P 394 (493)
.+.+.+. .+-.++.+.+|++ -.+++..++ +||+++|.+++.||+++|+|+|+.|
T Consensus 224 --------------------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~ 281 (364)
T 1f0k_A 224 --------------------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVP 281 (364)
T ss_dssp --------------------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC
T ss_pred --------------------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEee
Confidence 1222222 2213688889984 477999999 9999999999999999999999999
Q ss_pred cc---hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHH
Q 011099 395 LY---AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNS 471 (493)
Q Consensus 395 ~~---~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~ 471 (493)
.. .||..|+..+ .+.|.|..++ ..+.+.++++++|.++ |++ .+++. ++..++. .+..+..+.
T Consensus 282 ~~g~~~~q~~~~~~~-~~~g~g~~~~-----~~d~~~~~la~~i~~l--~~~---~~~~~---~~~~~~~-~~~~~~~~~ 346 (364)
T 1f0k_A 282 FQHKDRQQYWNALPL-EKAGAAKIIE-----QPQLSVDAVANTLAGW--SRE---TLLTM---AERARAA-SIPDATERV 346 (364)
T ss_dssp CCCTTCHHHHHHHHH-HHTTSEEECC-----GGGCCHHHHHHHHHTC--CHH---HHHHH---HHHHHHT-CCTTHHHHH
T ss_pred CCCCchhHHHHHHHH-HhCCcEEEec-----cccCCHHHHHHHHHhc--CHH---HHHHH---HHHHHHh-hccCHHHHH
Confidence 87 7999999998 5888998865 2456689999999988 544 34333 3333332 234444455
Q ss_pred HHHHHHHHHh
Q 011099 472 LSKIAHECEN 481 (493)
Q Consensus 472 ~~~~~~~~~~ 481 (493)
++.+.+..+.
T Consensus 347 ~~~~~~~y~~ 356 (364)
T 1f0k_A 347 ANEVSRVARA 356 (364)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 5555555553
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=1.2e-15 Score=137.39 Aligned_cols=149 Identities=15% Similarity=0.103 Sum_probs=95.0
Q ss_pred CCCeEEEEEcCCCCCCCHHHHHHH-----HHHHHhCC-CcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchh
Q 011099 268 PHESVIYVSFGSGGTLSSKQTMEL-----AWGLEQSK-QRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEG 341 (493)
Q Consensus 268 ~~~~~v~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 341 (493)
+++++|||+.||... -.+.+..+ +++|+..+ .+++++++...... +.. ..+ ....+ .+...+|.+
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~-----~~~-~~~-~~~~~-~~~~l~p~~ 96 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSE-----FEH-LVQ-ERGGQ-RESQKIPID 96 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCC-----CCS-HHH-HHTCE-ECSCCCSSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhh-----HHH-HHH-hhhcc-ccccccccc
Confidence 356799999999732 23333333 48888877 78999987553200 000 000 00000 000000100
Q ss_pred H------Hh----hhCCCceeeccCCChh-hhcC-CCCcccccccCCchHHHHHHHhCCceeecccc----hhcchhhHh
Q 011099 342 F------LI----RTRDVGLVVPMWAPQP-EILA-HPSVGGFLTHCGWNSTMESIVNGVPMIVWPLY----AEQKMNATM 405 (493)
Q Consensus 342 ~------~~----~~~~~~~~~~~~~pq~-~lL~-~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~ 405 (493)
. .. ...+.++.+.+|+++. ++|+ .++ ++|||||+||++|++++|||+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 0 00 0011145566898876 7899 999 999999999999999999999999984 479999999
Q ss_pred hhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 406 LTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 406 v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+ ++.|+++.+ +.++|.++|+++
T Consensus 175 l-~~~G~~~~~----------~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 F-VELGYVWSC----------APTETGLIAGLR 196 (224)
T ss_dssp H-HHHSCCCEE----------CSCTTTHHHHHH
T ss_pred H-HHCCCEEEc----------CHHHHHHHHHHH
Confidence 9 588988653 456677788777
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.49 E-value=9.7e-13 Score=123.38 Aligned_cols=116 Identities=9% Similarity=0.056 Sum_probs=86.9
Q ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhh-C
Q 011099 269 HESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRT-R 347 (493)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~ 347 (493)
+.+.|+|++|.... .+....++++|.... ++.++.+... ...+.+.+.. .
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~--------------------------~~~~~l~~~~~~ 206 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN--------------------------PNLKKLQKFAKL 206 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC--------------------------TTHHHHHHHHHT
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc--------------------------hHHHHHHHHHhh
Confidence 34589999997432 235566778877654 5666664432 1123333222 2
Q ss_pred CCceeeccCCChh-hhcCCCCcccccccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEee
Q 011099 348 DVGLVVPMWAPQP-EILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSK 417 (493)
Q Consensus 348 ~~~~~~~~~~pq~-~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~ 417 (493)
.+|+.+.+|+++. +++..++ ++|++|| +|++|+++.|+|+|++|...+|..||+.+ ++.|++..+.
T Consensus 207 ~~~v~v~~~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~ 273 (282)
T 3hbm_A 207 HNNIRLFIDHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYK 273 (282)
T ss_dssp CSSEEEEESCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECG
T ss_pred CCCEEEEeCHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcc
Confidence 3478888999876 5889999 9999999 89999999999999999999999999999 6999999875
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.25 E-value=1.2e-10 Score=114.91 Aligned_cols=79 Identities=14% Similarity=0.156 Sum_probs=60.3
Q ss_pred CceeeccCCCh---hhhcCCCCcccccccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCc
Q 011099 349 VGLVVPMWAPQ---PEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSV 425 (493)
Q Consensus 349 ~~~~~~~~~pq---~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~ 425 (493)
.++.+.+++++ .+++..++ +||+++| |.+.||+++|+|+|+.+..+++... + +.|.|..++
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~--~~g~g~lv~-------- 318 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L--KAGILKLAG-------- 318 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H--HHTSEEECC--------
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h--cCCceEECC--------
Confidence 36777766665 47888999 8999884 4466999999999998876666552 2 446776642
Q ss_pred cchHHHHHHHHHHhcccc
Q 011099 426 VERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 426 ~~~~~l~~ai~~vl~~~~ 443 (493)
.+.++|+++|.++++|++
T Consensus 319 ~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 319 TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp SCHHHHHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHHHHhChH
Confidence 388999999999998764
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.18 E-value=2.2e-10 Score=113.27 Aligned_cols=79 Identities=15% Similarity=0.112 Sum_probs=60.0
Q ss_pred CceeeccCCCh---hhhcCCCCcccccccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCc
Q 011099 349 VGLVVPMWAPQ---PEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSV 425 (493)
Q Consensus 349 ~~~~~~~~~pq---~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~ 425 (493)
.++.+.+++++ .+++..++ +||+.+| +.+.||+++|+|+|+.+..++.. .+. +.|.|..++ .
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v-~~g~g~lv~------~- 327 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAV-TAGTVRLVG------T- 327 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHH-HHTSEEEEC------S-
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcc----hhh-hCCceEEeC------C-
Confidence 46777666664 56788899 8999886 44889999999999998744433 232 446787764 3
Q ss_pred cchHHHHHHHHHHhcccc
Q 011099 426 VERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 426 ~~~~~l~~ai~~vl~~~~ 443 (493)
+.++|+++|.++++|++
T Consensus 328 -d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 328 -DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp -SHHHHHHHHHHHHHCHH
T ss_pred -CHHHHHHHHHHHHhChH
Confidence 88999999999998764
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.15 E-value=1.9e-08 Score=99.47 Aligned_cols=348 Identities=8% Similarity=-0.043 Sum_probs=179.4
Q ss_pred CCCEEEEEcC--C--CccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCC
Q 011099 4 RKPHVALLAS--P--GMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCT 79 (493)
Q Consensus 4 ~~~~vl~~~~--p--~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 79 (493)
++|+|++++. + ..|.-.-+..|++.| + ||+|++++....... ....... .++.+..++......
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQNAEE--AHAYDKT---LDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECSSHHH--HHHHHTT---CSSEEEEESSSSCCS----
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCCCccc--hhhhccc---cceEEEEcccccccc----
Confidence 3588999874 3 357888899999999 7 899999998864321 0111111 256666665422111
Q ss_pred CcchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcch--hHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhh
Q 011099 80 DASLVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGT--EAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVL 157 (493)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~--~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 157 (493)
.. .....+.+++++. +||+|++..... ....++.++|+|.+++..-.... . .
T Consensus 71 --~~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-----~-------~- 124 (394)
T 3okp_A 71 --TP---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-----G-------W- 124 (394)
T ss_dssp --CH---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-----H-------H-
T ss_pred --ch---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-----h-------h-
Confidence 11 2233566777776 999999764433 34457889999854433221000 0 0
Q ss_pred hhhcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCCCC
Q 011099 158 QEEHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVAKA 237 (493)
Q Consensus 158 ~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~p 237 (493)
..........+. .++.++.+++.|....+. +... ++ +..
T Consensus 125 ------------------------------~~~~~~~~~~~~--~~~~~d~ii~~s~~~~~~-----~~~~--~~--~~~ 163 (394)
T 3okp_A 125 ------------------------------SMLPGSRQSLRK--IGTEVDVLTYISQYTLRR-----FKSA--FG--SHP 163 (394)
T ss_dssp ------------------------------TTSHHHHHHHHH--HHHHCSEEEESCHHHHHH-----HHHH--HC--SSS
T ss_pred ------------------------------hhcchhhHHHHH--HHHhCCEEEEcCHHHHHH-----HHHh--cC--CCC
Confidence 000011111111 234567777776543322 1111 10 012
Q ss_pred CeEEeccccCCCC-CC-CCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhC-----CCcEEEEEcCCC
Q 011099 238 PVYPVGPLARSVA-SS-PVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQS-----KQRFIWVVRPPL 310 (493)
Q Consensus 238 ~~~~vGp~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~ 310 (493)
++..+........ .. .......+.+-+.- +++..+++..|+... ...+..++++++.+ +.++++ ++...
T Consensus 164 ~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~ 239 (394)
T 3okp_A 164 TFEHLPSGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLI-VGSGR 239 (394)
T ss_dssp EEEECCCCBCTTTSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEE-ECCCT
T ss_pred CeEEecCCcCHHHcCCCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEE-EcCch
Confidence 3555553332211 00 00011112222221 222356666787632 12234444444332 344444 33221
Q ss_pred CCCccccccccCCCCCcccccccccCCCchhHHhhhC--CCceeeccCCChhh---hcCCCCcccccc-----------c
Q 011099 311 DHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTR--DVGLVVPMWAPQPE---ILAHPSVGGFLT-----------H 374 (493)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~~~~~pq~~---lL~~~~~~~~i~-----------H 374 (493)
..+.+.+... ..++.+.+|+|+.+ ++..++ ++|. -
T Consensus 240 ---------------------------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e 290 (394)
T 3okp_A 240 ---------------------------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVE 290 (394)
T ss_dssp ---------------------------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCC
T ss_pred ---------------------------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCcccccccccc
Confidence 1112211111 23688889998655 677888 5665 4
Q ss_pred CCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccc-hHHHHHHHHH
Q 011099 375 CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQ-GHAIRNRVEE 453 (493)
Q Consensus 375 gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~ 453 (493)
|.-+++.||+++|+|+|+.+. ......+ +. |.|...+ .-+.+++.++|.+++.+++ .+++++++++
T Consensus 291 ~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~-~~g~~~~-------~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 291 GLGIVYLEAQACGVPVIAGTS----GGAPETV-TP-ATGLVVE-------GSDVDKLSELLIELLDDPIRRAAMGAAGRA 357 (394)
T ss_dssp SSCHHHHHHHHTTCCEEECSS----TTGGGGC-CT-TTEEECC-------TTCHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHcCCCEEEeCC----CChHHHH-hc-CCceEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 556789999999999999765 3344444 34 3676643 2478999999999998754 1223333333
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHHHHhcc
Q 011099 454 LKHSAQKALINGGSSYNSLSKIAHECENSL 483 (493)
Q Consensus 454 l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~ 483 (493)
.. .+.-+....++++.+-+++..
T Consensus 358 ~~-------~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 358 HV-------EAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HH-------HHHTBHHHHHHHHHHHHHSCC
T ss_pred HH-------HHhCCHHHHHHHHHHHHHHhc
Confidence 22 223344556666666666544
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.11 E-value=3.3e-08 Score=99.44 Aligned_cols=95 Identities=8% Similarity=-0.017 Sum_probs=65.6
Q ss_pred CceeeccCCChh---hhcCCCCccccccc----CCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCC
Q 011099 349 VGLVVPMWAPQP---EILAHPSVGGFLTH----CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPS 421 (493)
Q Consensus 349 ~~~~~~~~~pq~---~lL~~~~~~~~i~H----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~ 421 (493)
.++.+.+|+|+. .++..++ ++|.- |.-+++.||+++|+|+|+.+. ......+ ++.+.|...+
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~---- 374 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD---- 374 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES----
T ss_pred CcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC----
Confidence 478888999874 5778888 55543 335689999999999999764 3445555 4555677653
Q ss_pred CCCccchHHHHHHHHHHhcccc-hHHHHHHHHHHHHH
Q 011099 422 EKSVVERGEIEMMVRRIVAEKQ-GHAIRNRVEELKHS 457 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~ 457 (493)
.-+.++++++|.++++|+. ..++.+++++..+.
T Consensus 375 ---~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 375 ---GHSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp ---SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 2478999999999998754 23344555444433
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.10 E-value=1.4e-09 Score=108.12 Aligned_cols=317 Identities=14% Similarity=0.057 Sum_probs=163.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCchhhhhhccCCCCCCCeEE-EEcCCCCCCCCCCCCcc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSSEQLSKLVNSPDYDILDI-VLLPCIDISGIVCTDAS 82 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~ 82 (493)
+|+|++++ +++....=+-.|.++|+++. |+++.++.+....+ ....+++.. ++.. ..+.. . ..+..
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~-m~~~~~~~~----~i~~~~~l~v-----~-~~~~~ 94 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHRE-MLDQVLEIF----DIKPDIDLDI-----M-KKGQT 94 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC------CHHHHHHT----TCCCSEECCC-----C-C-CCC
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHH-HHHHHHHhc----CCCCCccccc-----C-CCCCC
Confidence 46787776 77877777889999999883 48887776664321 223333322 1210 11111 0 11122
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEEC--Cc-chhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhh
Q 011099 83 LVTQIAVMMHESIPALRSTISAMKYRPTALIVD--LF-GTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQE 159 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D--~~-~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (493)
.. .........+.++++++ +||+|++- .. .+++..+|..+|||++.+...
T Consensus 95 ~~----~~~~~~~~~l~~~l~~~--kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ag--------------------- 147 (403)
T 3ot5_A 95 LA----EITSRVMNGINEVIAAE--NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG--------------------- 147 (403)
T ss_dssp HH----HHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCC---------------------
T ss_pred HH----HHHHHHHHHHHHHHHHc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC---------------------
Confidence 22 22344556778888888 99999963 22 333567899999997654211
Q ss_pred hcccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCCCC--
Q 011099 160 EHVNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVAKA-- 237 (493)
Q Consensus 160 ~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~p-- 237 (493)
+..+ .....+.....+.. ...-++.+++.+-...+ .+... ..+
T Consensus 148 -------------lrs~----------~~~~~~p~~~~r~~-~~~~a~~~~~~se~~~~-----~l~~~------Gi~~~ 192 (403)
T 3ot5_A 148 -------------LRTW----------NKYSPFPEEMNRQL-TGVMADIHFSPTKQAKE-----NLLAE------GKDPA 192 (403)
T ss_dssp -------------CCCS----------CTTSSTTHHHHHHH-HHHHCSEEEESSHHHHH-----HHHHT------TCCGG
T ss_pred -------------cccc----------ccccCCcHHHHHHH-HHHhcCEEECCCHHHHH-----HHHHc------CCCcc
Confidence 0000 00000001111110 00113344555432221 11111 122
Q ss_pred CeEEeccccCCC----CCCCCcccccccccccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhC-----CCcEEEEEcC
Q 011099 238 PVYPVGPLARSV----ASSPVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQS-----KQRFIWVVRP 308 (493)
Q Consensus 238 ~~~~vGp~~~~~----~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~ 308 (493)
+++.+|....+. .... ...+..+.+ +++++++++.|...... +.+..++++++.+ +.++++..+.
T Consensus 193 ~i~vvGn~~~D~~~~~~~~~--~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~ 266 (403)
T 3ot5_A 193 TIFVTGNTAIDALKTTVQKD--YHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHL 266 (403)
T ss_dssp GEEECCCHHHHHHHHHSCTT--CCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCS
T ss_pred cEEEeCCchHHHHHhhhhhh--cchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCC
Confidence 388888543220 0000 111221222 34567777765321111 1245555555432 3456655432
Q ss_pred CCCCCccccccccCCCCCcccccccccCCCchhHHhhhC-CCceeeccCCCh---hhhcCCCCcccccccCCchHHHHHH
Q 011099 309 PLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTR-DVGLVVPMWAPQ---PEILAHPSVGGFLTHCGWNSTMESI 384 (493)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~pq---~~lL~~~~~~~~i~HgG~gs~~eal 384 (493)
+ ..+-+.+.+... ..++.+.+++++ ..++..++ ++|+-.| |.+.||.
T Consensus 267 ~--------------------------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad--~vv~~SG-g~~~EA~ 317 (403)
T 3ot5_A 267 N--------------------------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSY--LVFTDSG-GVQEEAP 317 (403)
T ss_dssp C--------------------------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEE--EEEECCH-HHHHHGG
T ss_pred C--------------------------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHH
Confidence 1 001111111121 246777788863 46788888 8998875 3336999
Q ss_pred HhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccc
Q 011099 385 VNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 385 ~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
++|+|+|++|-.++++. ++ +.|.|+.+. .+.++|.+++.+++.|+.
T Consensus 318 a~g~PvV~~~~~~~~~e----~v-~~g~~~lv~--------~d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 318 GMGVPVLVLRDTTERPE----GI-EAGTLKLIG--------TNKENLIKEALDLLDNKE 363 (403)
T ss_dssp GTTCCEEECCSSCSCHH----HH-HHTSEEECC--------SCHHHHHHHHHHHHHCHH
T ss_pred HhCCCEEEecCCCcchh----he-eCCcEEEcC--------CCHHHHHHHHHHHHcCHH
Confidence 99999999976666554 22 557776643 278999999999998765
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.07 E-value=8.8e-10 Score=109.46 Aligned_cols=321 Identities=12% Similarity=0.025 Sum_probs=166.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeE-EEEcCCCCCCCCCCCCcchH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILD-IVLLPCIDISGIVCTDASLV 84 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~ 84 (493)
++|++++ +++....=+..|.++|+++.|+++.++.+....+ ....+++.. ++. -..+.. . .......
T Consensus 26 ~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~-~~~~~~~~~----~i~~~~~l~~-----~-~~~~~~~ 93 (396)
T 3dzc_A 26 KKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHRE-MLDQVLELF----SITPDFDLNI-----M-EPGQTLN 93 (396)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSH-HHHHHHHHT----TCCCSEECCC-----C-CTTCCHH
T ss_pred CeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHH-HHHHHHHhc----CCCCceeeec-----C-CCCCCHH
Confidence 5676666 8888888888899999886368887776665432 223333322 121 011211 0 1111222
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEEE--CCcc-hhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhhhc
Q 011099 85 TQIAVMMHESIPALRSTISAMKYRPTALIV--DLFG-TEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQEEH 161 (493)
Q Consensus 85 ~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~--D~~~-~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 161 (493)
. ........+.++++++ +||+|++ |... +++..+|..+|||++.+...
T Consensus 94 ~----~~~~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag----------------------- 144 (396)
T 3dzc_A 94 G----VTSKILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG----------------------- 144 (396)
T ss_dssp H----HHHHHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC-----------------------
T ss_pred H----HHHHHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC-----------------------
Confidence 2 2344556778888888 9999986 3333 34467899999997654210
Q ss_pred ccCCCcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCCCC--Ce
Q 011099 162 VNQKKPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVAKA--PV 239 (493)
Q Consensus 162 ~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~p--~~ 239 (493)
+.. +.....+.....+.. ....++.+++.+-..-+ .+... + .+ ++
T Consensus 145 -----------~rs----------~~~~~~~~~~~~r~~-~~~~a~~~~~~se~~~~-----~l~~~---G---~~~~ki 191 (396)
T 3dzc_A 145 -----------LRT----------GNIYSPWPEEGNRKL-TAALTQYHFAPTDTSRA-----NLLQE---N---YNAENI 191 (396)
T ss_dssp -----------CCC----------SCTTSSTTHHHHHHH-HHHTCSEEEESSHHHHH-----HHHHT---T---CCGGGE
T ss_pred -----------ccc----------cccccCCcHHHHHHH-HHHhcCEEECCCHHHHH-----HHHHc---C---CCcCcE
Confidence 000 000000111111111 01233455555533211 11111 1 22 38
Q ss_pred EEeccccCCCCCCCCcc-------ccccccccc-CCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhC-----CCcEEEEE
Q 011099 240 YPVGPLARSVASSPVSG-------SHVVLDWLD-KQPHESVIYVSFGSGGTLSSKQTMELAWGLEQS-----KQRFIWVV 306 (493)
Q Consensus 240 ~~vGp~~~~~~~~~~~~-------~~~~~~~l~-~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~ 306 (493)
+.||....+........ ..++.+-+. -.+++++++++.+-...... .+..+++|++.+ +.++++..
T Consensus 192 ~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~ 270 (396)
T 3dzc_A 192 FVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPV 270 (396)
T ss_dssp EECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEe
Confidence 88885432210000000 012222222 11345677777532122222 245666666543 34555544
Q ss_pred cCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhC-CCceeeccCCC---hhhhcCCCCcccccccCCchHHHH
Q 011099 307 RPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTR-DVGLVVPMWAP---QPEILAHPSVGGFLTHCGWNSTME 382 (493)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~p---q~~lL~~~~~~~~i~HgG~gs~~e 382 (493)
+.+. .+-+.+.+... .+++.+.++++ ...++..++ +||+-.| |.+.|
T Consensus 271 g~~~--------------------------~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~E 321 (396)
T 3dzc_A 271 HLNP--------------------------NVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEE 321 (396)
T ss_dssp CBCH--------------------------HHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTT
T ss_pred CCCh--------------------------HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHH
Confidence 3210 00111212111 24677767775 456788899 8999988 66689
Q ss_pred HHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccc
Q 011099 383 SIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 383 al~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
|.++|+|+|+..-..+++ . ++ +.|.++.+. .++++|.+++.+++.|+.
T Consensus 322 A~a~G~PvV~~~~~~~~~---e-~v-~~G~~~lv~--------~d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 322 APSLGKPVLVMRETTERP---E-AV-AAGTVKLVG--------TNQQQICDALSLLLTDPQ 369 (396)
T ss_dssp GGGGTCCEEECCSSCSCH---H-HH-HHTSEEECT--------TCHHHHHHHHHHHHHCHH
T ss_pred HHHcCCCEEEccCCCcch---H-HH-HcCceEEcC--------CCHHHHHHHHHHHHcCHH
Confidence 999999999975444443 2 32 457675542 268999999999998765
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.01 E-value=2.3e-07 Score=93.01 Aligned_cols=111 Identities=11% Similarity=0.015 Sum_probs=71.9
Q ss_pred CceeeccCCChhh---hcCCCCcccccc----cCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCC
Q 011099 349 VGLVVPMWAPQPE---ILAHPSVGGFLT----HCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPS 421 (493)
Q Consensus 349 ~~~~~~~~~pq~~---lL~~~~~~~~i~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~ 421 (493)
.++.+.+|+++.+ ++..++ ++|. -|--+++.||+++|+|+|+... ......+ +. |.|..++
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~---- 378 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK---- 378 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEEC----
T ss_pred CEEEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeC----
Confidence 3566679899864 678888 5552 2334799999999999999754 4455554 23 5777753
Q ss_pred CCCccchHHHHHHHHHHhc-ccc-hHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 011099 422 EKSVVERGEIEMMVRRIVA-EKQ-GHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECENS 482 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~-~~~-~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 482 (493)
.-+.++++++|.+++. +++ ..++.+++++.. +.-+....++++.+-+++.
T Consensus 379 ---~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--------~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 379 ---AGDPGELANAILKALELSRSDLSKFRENCKKRA--------MSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp ---TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH--------HTSCHHHHHHHHHHHHHTC
T ss_pred ---CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH--------hhCcHHHHHHHHHHHHHHH
Confidence 2478999999999998 654 233444444333 1244455566666655543
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.01 E-value=1.2e-07 Score=94.06 Aligned_cols=81 Identities=10% Similarity=0.062 Sum_probs=60.3
Q ss_pred CceeeccCCChh---hhcCCCCcccccc----cCCc-hHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccC
Q 011099 349 VGLVVPMWAPQP---EILAHPSVGGFLT----HCGW-NSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVP 420 (493)
Q Consensus 349 ~~~~~~~~~pq~---~lL~~~~~~~~i~----HgG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~ 420 (493)
.++.+.+++++. .++..++ ++|. +.|+ +++.||+++|+|+|+.+. ......+ ++.+.|...+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~--- 332 (406)
T 2gek_A 263 GHLRFLGQVDDATKASAMRSAD--VYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVP--- 332 (406)
T ss_dssp GGEEECCSCCHHHHHHHHHHSS--EEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECC---
T ss_pred CcEEEEecCCHHHHHHHHHHCC--EEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeC---
Confidence 478888999975 6888899 5553 3344 489999999999999865 4455555 4556677653
Q ss_pred CCCCccchHHHHHHHHHHhcccc
Q 011099 421 SEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 421 ~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
.-+.+++.++|.+++.++.
T Consensus 333 ----~~d~~~l~~~i~~l~~~~~ 351 (406)
T 2gek_A 333 ----VDDADGMAAALIGILEDDQ 351 (406)
T ss_dssp ----TTCHHHHHHHHHHHHHCHH
T ss_pred ----CCCHHHHHHHHHHHHcCHH
Confidence 2478999999999998754
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.96 E-value=1.5e-08 Score=99.61 Aligned_cols=79 Identities=16% Similarity=0.139 Sum_probs=58.3
Q ss_pred CceeeccCCCh---hhhcCCCCcccccccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCc
Q 011099 349 VGLVVPMWAPQ---PEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSV 425 (493)
Q Consensus 349 ~~~~~~~~~pq---~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~ 425 (493)
.++.+.+++++ ..++..++ +||+.+| +.+.||+++|+|+|+....+.. ...+ ..|.|..++ .
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e~v--~~g~g~~v~------~- 327 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTER---PEGI--EAGTLKLAG------T- 327 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSC---HHHH--HTTSEEECC------S-
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCC---ceee--cCCceEEcC------C-
Confidence 47877677765 46788899 8888874 5688999999999998543332 2223 446777753 2
Q ss_pred cchHHHHHHHHHHhcccc
Q 011099 426 VERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 426 ~~~~~l~~ai~~vl~~~~ 443 (493)
+.++|+++|.++++|++
T Consensus 328 -d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 328 -DEETIFSLADELLSDKE 344 (375)
T ss_dssp -CHHHHHHHHHHHHHCHH
T ss_pred -CHHHHHHHHHHHHhChH
Confidence 78999999999998764
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.95 E-value=7.8e-07 Score=88.00 Aligned_cols=80 Identities=13% Similarity=0.068 Sum_probs=57.6
Q ss_pred ceeeccCCCh-hhhcCCCCccccc----ccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCC
Q 011099 350 GLVVPMWAPQ-PEILAHPSVGGFL----THCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKS 424 (493)
Q Consensus 350 ~~~~~~~~pq-~~lL~~~~~~~~i----~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~ 424 (493)
++.+.++..+ ..++..++ ++| .-|.-+++.||+++|+|+|+.+.. .....+ ++.+.|...+
T Consensus 268 ~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v-~~~~~g~~~~------- 333 (394)
T 2jjm_A 268 RVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI-QHGDTGYLCE------- 333 (394)
T ss_dssp GBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC-CBTTTEEEEC-------
T ss_pred eEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh-hcCCceEEeC-------
Confidence 5666676543 56888888 666 456678999999999999998753 344444 3445676653
Q ss_pred ccchHHHHHHHHHHhcccc
Q 011099 425 VVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 425 ~~~~~~l~~ai~~vl~~~~ 443 (493)
.-+.++++++|.+++.|++
T Consensus 334 ~~d~~~la~~i~~l~~~~~ 352 (394)
T 2jjm_A 334 VGDTTGVADQAIQLLKDEE 352 (394)
T ss_dssp TTCHHHHHHHHHHHHHCHH
T ss_pred CCCHHHHHHHHHHHHcCHH
Confidence 2378999999999998754
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.89 E-value=3.9e-07 Score=93.34 Aligned_cols=81 Identities=15% Similarity=0.060 Sum_probs=57.6
Q ss_pred CceeeccCCChhh---hcCCC----Cccccccc----CCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEee
Q 011099 349 VGLVVPMWAPQPE---ILAHP----SVGGFLTH----CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSK 417 (493)
Q Consensus 349 ~~~~~~~~~pq~~---lL~~~----~~~~~i~H----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~ 417 (493)
.++.+.+++|+.+ ++..+ + +||.- |--+++.||+++|+|+|+... ......+ +....|..++
T Consensus 335 ~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~ 407 (499)
T 2r60_A 335 GKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVD 407 (499)
T ss_dssp TTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEEC
T ss_pred ceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeC
Confidence 3688889998654 66677 7 55532 334689999999999999864 3444444 3544677653
Q ss_pred ccCCCCCccchHHHHHHHHHHhcccc
Q 011099 418 EVPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 418 ~~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
.-+.++++++|.++++|+.
T Consensus 408 -------~~d~~~la~~i~~ll~~~~ 426 (499)
T 2r60_A 408 -------PEDPEDIARGLLKAFESEE 426 (499)
T ss_dssp -------TTCHHHHHHHHHHHHSCHH
T ss_pred -------CCCHHHHHHHHHHHHhCHH
Confidence 2478999999999998764
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.78 E-value=3.9e-07 Score=88.33 Aligned_cols=125 Identities=16% Similarity=0.141 Sum_probs=80.0
Q ss_pred EEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCcee
Q 011099 273 IYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLV 352 (493)
Q Consensus 273 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 352 (493)
+++..|+.. ....+..++++++.++.+++++- ..... ..+ ..+.++.+ .++.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G-~g~~~-----------------------~~l-~~~~~~~~-~~v~ 215 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAG-PAWEP-----------------------EYF-DEITRRYG-STVE 215 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEES-CCCCH-----------------------HHH-HHHHHHHT-TTEE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEe-CcccH-----------------------HHH-HHHHHHhC-CCEE
Confidence 344457754 23446677777777777765543 22100 111 12222333 5788
Q ss_pred eccCCChh---hhcCCCCccccc--cc------------CCchHHHHHHHhCCceeecccchhcchhhHhhhhh--eeee
Q 011099 353 VPMWAPQP---EILAHPSVGGFL--TH------------CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEE--LRVA 413 (493)
Q Consensus 353 ~~~~~pq~---~lL~~~~~~~~i--~H------------gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~--~Gvg 413 (493)
+.+|+++. +++..++ ++| +. |--+++.||+++|+|+|+... ..+...+ ++ -+.|
T Consensus 216 ~~g~~~~~~l~~~~~~ad--v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g 288 (342)
T 2iuy_A 216 PIGEVGGERRLDLLASAH--AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVG 288 (342)
T ss_dssp ECCCCCHHHHHHHHHHCS--EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECC
T ss_pred EeccCCHHHHHHHHHhCC--EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCce
Confidence 88999986 6788888 555 22 334689999999999999875 3455555 45 4566
Q ss_pred EEeeccCCCCCccchHHHHHHHHHHhc
Q 011099 414 IRSKEVPSEKSVVERGEIEMMVRRIVA 440 (493)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~ai~~vl~ 440 (493)
... .. +.++++++|.++++
T Consensus 289 ~~~-------~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 289 YGT-------DF-APDEARRTLAGLPA 307 (342)
T ss_dssp SSS-------CC-CHHHHHHHHHTSCC
T ss_pred EEc-------CC-CHHHHHHHHHHHHH
Confidence 654 33 88999999999986
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.76 E-value=1.3e-05 Score=78.35 Aligned_cols=93 Identities=11% Similarity=0.133 Sum_probs=65.6
Q ss_pred CceeeccCCCh-hhhcCCCCcccccc----cCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCC
Q 011099 349 VGLVVPMWAPQ-PEILAHPSVGGFLT----HCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEK 423 (493)
Q Consensus 349 ~~~~~~~~~pq-~~lL~~~~~~~~i~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~ 423 (493)
.++.+.++..+ .+++..++ ++|. -|.-+++.||+++|+|+|+... ..+...+ ++.+.|..++
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~------ 319 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIA------ 319 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEEC------
T ss_pred CcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeC------
Confidence 36777777543 56888888 6664 4667899999999999999765 3455666 5667787763
Q ss_pred CccchHHHHHHHHHHhcccc-hHHHHHHHHHH
Q 011099 424 SVVERGEIEMMVRRIVAEKQ-GHAIRNRVEEL 454 (493)
Q Consensus 424 ~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l 454 (493)
..-+.+++.++|.++++|++ ..++.+++++.
T Consensus 320 ~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 320 EPFSQEQLNEVLRKALTQSPLRMAWAENARHY 351 (374)
T ss_dssp SSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 23578999999999998754 23344444433
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.73 E-value=1.4e-07 Score=92.97 Aligned_cols=314 Identities=12% Similarity=0.020 Sum_probs=164.5
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhh-hccCCCCCCCeEEEEcCCCCCCCCCCCCcchHHHH
Q 011099 9 ALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLS-KLVNSPDYDILDIVLLPCIDISGIVCTDASLVTQI 87 (493)
Q Consensus 9 l~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~-~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 87 (493)
+++..|++-.+.=+-.|.++|.++ ++..++.+....+..... .+.. +. ++.++..-. ..+.+.
T Consensus 12 ~~~v~GtRpe~~k~~p~~~~l~~~--~~~~~~~tgqh~~~~~~~~~~~~------~~---i~~~~~~l~-~~~~~~---- 75 (385)
T 4hwg_A 12 VMTIVGTRPELIKLCCVISEFDKH--TKHILVHTGQNYAYELNQVFFDD------MG---IRKPDYFLE-VAADNT---- 75 (385)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHH--SEEEEEECSCHHHHHHTHHHHC-------CC---CCCCSEECC-CCCCCS----
T ss_pred eeEEEEcCHhHHHHHHHHHHHHhc--CCEEEEEeCCCCChhHHHHHHhh------CC---CCCCceecC-CCCCCH----
Confidence 444558998888899999999875 788888777643321122 1121 11 111111100 111122
Q ss_pred HHHHHHhhHHHHHHHHhcCCCCcEEEE--CCcchhHHHHHHHcCCeEEEEecchHHHHHHHhhhcchhhhhhhhhcccCC
Q 011099 88 AVMMHESIPALRSTISAMKYRPTALIV--DLFGTEAMAVADEFEMLKYMFIASNAWFVAVTIYAPALDKKVLQEEHVNQK 165 (493)
Q Consensus 88 ~~~~~~~~~~l~~ll~~~~~~~DlVI~--D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 165 (493)
..........+.+++++. +||+||+ |....++..+|.++|||++.+...
T Consensus 76 ~~~~~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag--------------------------- 126 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG--------------------------- 126 (385)
T ss_dssp HHHHHHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC---------------------------
T ss_pred HHHHHHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC---------------------------
Confidence 223344566778888888 9999885 444555577999999996654211
Q ss_pred CcccCCCCCCCCcccccccccCCCCcchHHHHHHhhhccCccEEEEcChhhhhHHHHHHHHhhhhhccCCCC--CeEEec
Q 011099 166 KPLKIPGCSAVRFEDTLEAFLDPYGPMYDGFLQVGMDMSKADGILVNTWEDLESKTLAALRDFNMLRRVAKA--PVYPVG 243 (493)
Q Consensus 166 ~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~p--~~~~vG 243 (493)
+.. +.. .+.....+.. .-.-++..++.+-..-+. +... ..+ +++.+|
T Consensus 127 -------lrs---------~~~---~~pee~nR~~-~~~~a~~~~~~te~~~~~-----l~~~------G~~~~~I~vtG 175 (385)
T 4hwg_A 127 -------NRC---------FDQ---RVPEEINRKI-IDHISDVNITLTEHARRY-----LIAE------GLPAELTFKSG 175 (385)
T ss_dssp -------CCC---------SCT---TSTHHHHHHH-HHHHCSEEEESSHHHHHH-----HHHT------TCCGGGEEECC
T ss_pred -------Ccc---------ccc---cCcHHHHHHH-HHhhhceeecCCHHHHHH-----HHHc------CCCcCcEEEEC
Confidence 000 000 0001111110 001123344444322111 1111 122 388888
Q ss_pred cccCCCCCC--CCcccccccccccCCCCCeEEEEEcCCCCCCCH-HHHHHHHHHHHhC----CCcEEEEEcCCCCCCccc
Q 011099 244 PLARSVASS--PVSGSHVVLDWLDKQPHESVIYVSFGSGGTLSS-KQTMELAWGLEQS----KQRFIWVVRPPLDHDVFD 316 (493)
Q Consensus 244 p~~~~~~~~--~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~ 316 (493)
....+.... ......++.+-+.-. +++.++++.|.....+. +.+..++++++.+ +..+|+...+..
T Consensus 176 np~~D~~~~~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~------ 248 (385)
T 4hwg_A 176 SHMPEVLDRFMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT------ 248 (385)
T ss_dssp CSHHHHHHHHHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH------
T ss_pred CchHHHHHHhhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH------
Confidence 543221000 000111222222221 34588888887543332 4466677776544 556776552110
Q ss_pred cccccCCCCCcccccccccCCCchhHHhh---h-CCCceeeccCCCh---hhhcCCCCcccccccCCchHHHHHHHhCCc
Q 011099 317 SYLTAGSGALNTAEGALDYHYLPEGFLIR---T-RDVGLVVPMWAPQ---PEILAHPSVGGFLTHCGWNSTMESIVNGVP 389 (493)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~~~~~~~~~pq---~~lL~~~~~~~~i~HgG~gs~~eal~~GvP 389 (493)
-+.+.+. . ..+++.+.+.+++ ..++.+++ ++|+-.|. .+.||.+.|+|
T Consensus 249 ----------------------~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~P 303 (385)
T 4hwg_A 249 ----------------------KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLP 303 (385)
T ss_dssp ----------------------HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCC
T ss_pred ----------------------HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCC
Confidence 0011110 1 1236766566554 56888999 99999886 46999999999
Q ss_pred eeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcccc
Q 011099 390 MIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 390 ~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
+|+++...+-+. .+ +.|.++.+. .++++|.+++.++++|+.
T Consensus 304 vv~~~~~ter~e---~v--~~G~~~lv~--------~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 304 ALNIREAHERPE---GM--DAGTLIMSG--------FKAERVLQAVKTITEEHD 344 (385)
T ss_dssp EEECSSSCSCTH---HH--HHTCCEECC--------SSHHHHHHHHHHHHTTCB
T ss_pred EEEcCCCccchh---hh--hcCceEEcC--------CCHHHHHHHHHHHHhChH
Confidence 999976433221 23 457666542 378999999999998864
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.54 E-value=3.5e-05 Score=76.54 Aligned_cols=79 Identities=10% Similarity=-0.020 Sum_probs=57.1
Q ss_pred CceeeccCCC---h---hhhcCCCCcccccccC----CchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeec
Q 011099 349 VGLVVPMWAP---Q---PEILAHPSVGGFLTHC----GWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKE 418 (493)
Q Consensus 349 ~~~~~~~~~p---q---~~lL~~~~~~~~i~Hg----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~ 418 (493)
.++.+.+|++ + ..++..++ ++|.-. .-+++.||+++|+|+|+.+. ..+...+ ++.+.|...
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~-- 363 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV-- 363 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE--
T ss_pred CcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE--
Confidence 4777778665 3 34677788 666543 45789999999999999765 3455555 455567664
Q ss_pred cCCCCCccchHHHHHHHHHHhcccc
Q 011099 419 VPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 419 ~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
. +.++++++|.+++.|+.
T Consensus 364 -----~--d~~~la~~i~~ll~~~~ 381 (416)
T 2x6q_A 364 -----R--DANEAVEVVLYLLKHPE 381 (416)
T ss_dssp -----S--SHHHHHHHHHHHHHCHH
T ss_pred -----C--CHHHHHHHHHHHHhCHH
Confidence 3 78999999999998754
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.24 E-value=0.00041 Score=71.88 Aligned_cols=84 Identities=13% Similarity=0.151 Sum_probs=57.6
Q ss_pred CceeeccCCChh---hhcCCCCccccc--c-cCCchHHHHHHHhCCceeecccchhcchh-hHhhhhheeeeEEeeccCC
Q 011099 349 VGLVVPMWAPQP---EILAHPSVGGFL--T-HCGWNSTMESIVNGVPMIVWPLYAEQKMN-ATMLTEELRVAIRSKEVPS 421 (493)
Q Consensus 349 ~~~~~~~~~pq~---~lL~~~~~~~~i--~-HgG~gs~~eal~~GvP~l~~P~~~DQ~~n-a~~v~e~~Gvg~~~~~~~~ 421 (493)
.++.+.+++|+. .++..++ +|| + .|+-+++.||+++|+|+|++|-..=.... +..+ +..|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 368888999854 4678888 555 2 26677899999999999997743111111 2333 3456555442
Q ss_pred CCCccchHHHHHHHHHHhcccc
Q 011099 422 EKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
. +.+++.+++.+++.|+.
T Consensus 507 --~--~~~~la~~i~~l~~~~~ 524 (568)
T 2vsy_A 507 --A--DDAAFVAKAVALASDPA 524 (568)
T ss_dssp --S--SHHHHHHHHHHHHHCHH
T ss_pred --C--CHHHHHHHHHHHhcCHH
Confidence 2 78999999999998865
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.22 E-value=6.5e-05 Score=80.45 Aligned_cols=81 Identities=7% Similarity=0.012 Sum_probs=52.4
Q ss_pred CceeeccCC----ChhhhcC----CCCccccccc----CCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEe
Q 011099 349 VGLVVPMWA----PQPEILA----HPSVGGFLTH----CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRS 416 (493)
Q Consensus 349 ~~~~~~~~~----pq~~lL~----~~~~~~~i~H----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~ 416 (493)
.++.+.++. |+.++.. .++ +||.- |--.++.||+++|+|+|+-. -......+ ++-+.|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEEe
Confidence 356666744 3455443 445 55532 34569999999999999964 44455555 455567775
Q ss_pred eccCCCCCccchHHHHHHHHHHh----cccc
Q 011099 417 KEVPSEKSVVERGEIEMMVRRIV----AEKQ 443 (493)
Q Consensus 417 ~~~~~~~~~~~~~~l~~ai~~vl----~~~~ 443 (493)
+ .-+.++++++|.+++ .|+.
T Consensus 713 ~-------p~D~e~LA~aI~~lL~~Ll~d~~ 736 (816)
T 3s28_A 713 D-------PYHGDQAADTLADFFTKCKEDPS 736 (816)
T ss_dssp C-------TTSHHHHHHHHHHHHHHHHHCTH
T ss_pred C-------CCCHHHHHHHHHHHHHHhccCHH
Confidence 4 237788999997776 6654
No 42
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.05 E-value=2.9e-05 Score=67.35 Aligned_cols=80 Identities=10% Similarity=0.117 Sum_probs=58.9
Q ss_pred CceeeccCCCh---hhhcCCCCcccccc---cCCc-hHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCC
Q 011099 349 VGLVVPMWAPQ---PEILAHPSVGGFLT---HCGW-NSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPS 421 (493)
Q Consensus 349 ~~~~~~~~~pq---~~lL~~~~~~~~i~---HgG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~ 421 (493)
.++.+.+|+++ ..++..++ ++|. +.|+ +++.||+++|+|+|+... ..+...+ ++.+.|..+.
T Consensus 78 ~~v~~~g~~~~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~---- 146 (177)
T 2f9f_A 78 DNVKFLGSVSEEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLVN---- 146 (177)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEEC----
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEeC----
Confidence 37888899997 56788888 5554 3344 499999999999999754 4455555 3444565532
Q ss_pred CCCccchHHHHHHHHHHhcccc
Q 011099 422 EKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
-+.+++.++|.++++++.
T Consensus 147 ----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 147 ----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp ----SCHHHHHHHHHHHHHCTT
T ss_pred ----CCHHHHHHHHHHHHhCHH
Confidence 267999999999998765
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.00 E-value=0.0008 Score=66.50 Aligned_cols=109 Identities=9% Similarity=0.045 Sum_probs=63.4
Q ss_pred eeeccCCChhh---hcCCCCcccccc----cCCchHHHHHHHhCCceeecccchhcchhhHhhhhhe-------------
Q 011099 351 LVVPMWAPQPE---ILAHPSVGGFLT----HCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEEL------------- 410 (493)
Q Consensus 351 ~~~~~~~pq~~---lL~~~~~~~~i~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~------------- 410 (493)
+.+.+|+|+.+ ++..++ ++|. -|.-+++.||+++|+|+|+.... .....+ ++-
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SGDCVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CTTTSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-ccCccccccccccccc
Confidence 66669998544 677788 5552 23446899999999999997653 233332 111
Q ss_pred ----ee-eEEeeccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 011099 411 ----RV-AIRSKEVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECEN 481 (493)
Q Consensus 411 ----Gv-g~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 481 (493)
|+ | .+. .-+.++++++| +++.+++ .+ +++++..++.+.+.-+-+..++++.+-+++
T Consensus 329 ~~~~G~~g-l~~-------~~d~~~la~~i-~l~~~~~---~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 329 DDRDGIGG-IEG-------IIDVDDLVEAF-TFFKDEK---NR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTTCSSCC-EEE-------ECCHHHHHHHH-HHTTSHH---HH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred ccccCcce-eeC-------CCCHHHHHHHH-HHhcCHH---HH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33 1 332 23889999999 9998764 22 223333333233344444444444444443
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.98 E-value=0.00073 Score=68.46 Aligned_cols=80 Identities=11% Similarity=0.041 Sum_probs=55.0
Q ss_pred Ccee-eccCCChh---hhcCCCCcccccc----cCCchHHHHHHHhCCceeecccchhcchhhHhhhhhe---------e
Q 011099 349 VGLV-VPMWAPQP---EILAHPSVGGFLT----HCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEEL---------R 411 (493)
Q Consensus 349 ~~~~-~~~~~pq~---~lL~~~~~~~~i~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~---------G 411 (493)
.++. +.++ ++. .++..++ +||. -|--+++.||+++|+|+|+... ......+ ++. +
T Consensus 346 ~~v~~~~g~-~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 346 GRVGVAIGY-NEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAA 417 (485)
T ss_dssp TTEEEEESC-CHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCC
T ss_pred CcEEEecCC-CHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCC
Confidence 3565 5677 543 5788888 5652 2345689999999999999765 3344444 343 5
Q ss_pred eeEEeeccCCCCCccchHHHHHHHHHHh---cccc
Q 011099 412 VAIRSKEVPSEKSVVERGEIEMMVRRIV---AEKQ 443 (493)
Q Consensus 412 vg~~~~~~~~~~~~~~~~~l~~ai~~vl---~~~~ 443 (493)
.|...+ .-+.++++++|.+++ .|+.
T Consensus 418 ~G~l~~-------~~d~~~la~~i~~ll~~~~~~~ 445 (485)
T 1rzu_A 418 TGVQFS-------PVTLDGLKQAIRRTVRYYHDPK 445 (485)
T ss_dssp CBEEES-------SCSHHHHHHHHHHHHHHHTCHH
T ss_pred cceEeC-------CCCHHHHHHHHHHHHHHhCCHH
Confidence 677653 247799999999999 5543
No 45
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.89 E-value=0.0025 Score=64.39 Aligned_cols=81 Identities=9% Similarity=-0.053 Sum_probs=54.5
Q ss_pred Ccee-eccCCCh--hhhcCCCCccccccc----CCchHHHHHHHhCCceeecccchhcchhhHhhhhhe---------ee
Q 011099 349 VGLV-VPMWAPQ--PEILAHPSVGGFLTH----CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEEL---------RV 412 (493)
Q Consensus 349 ~~~~-~~~~~pq--~~lL~~~~~~~~i~H----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~---------Gv 412 (493)
.++. +.++.+. ..++..++ +||.- |.-+++.||+++|+|+|+... ..+...+ ++- +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccc
Confidence 3564 6677332 25788888 55522 345688999999999999865 3344444 343 56
Q ss_pred eEEeeccCCCCCccchHHHHHHHHHHh---cccc
Q 011099 413 AIRSKEVPSEKSVVERGEIEMMVRRIV---AEKQ 443 (493)
Q Consensus 413 g~~~~~~~~~~~~~~~~~l~~ai~~vl---~~~~ 443 (493)
|...+ .-+.++++++|.+++ .|+.
T Consensus 420 G~l~~-------~~d~~~la~~i~~ll~~~~~~~ 446 (485)
T 2qzs_A 420 GFVFE-------DSNAWSLLRAIRRAFVLWSRPS 446 (485)
T ss_dssp BEEEC-------SSSHHHHHHHHHHHHHHHTSHH
T ss_pred eEEEC-------CCCHHHHHHHHHHHHHHcCCHH
Confidence 77753 237899999999999 5543
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.84 E-value=0.0024 Score=62.33 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=64.6
Q ss_pred eeeccCCC-hhhhcCCCCcccccc---c--CCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCC
Q 011099 351 LVVPMWAP-QPEILAHPSVGGFLT---H--CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKS 424 (493)
Q Consensus 351 ~~~~~~~p-q~~lL~~~~~~~~i~---H--gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~ 424 (493)
+.+.++.. -..++..++ +|+. . +|..++.||+++|+|+|+-|..++.......+ .+.|.+....
T Consensus 262 v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~~------- 331 (374)
T 2xci_A 262 VILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEVK------- 331 (374)
T ss_dssp EEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEECC-------
T ss_pred EEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEeC-------
Confidence 44445433 356788888 5432 2 24478999999999999877777777766655 3567776642
Q ss_pred ccchHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011099 425 VVERGEIEMMVRRIVAEKQGHAIRNRVEELKHS 457 (493)
Q Consensus 425 ~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~ 457 (493)
+.++|+++|.++++|+..++|.+++++..+.
T Consensus 332 --d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 --NETELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp --SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 6789999999999872234466666665544
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.78 E-value=0.0018 Score=64.00 Aligned_cols=76 Identities=8% Similarity=-0.054 Sum_probs=54.2
Q ss_pred ceeeccCCChhh---hcCCCCcccccc-cCC-chHHHHHH-------HhCCceeecccchhcchhhHhhhhheeeeEE-e
Q 011099 350 GLVVPMWAPQPE---ILAHPSVGGFLT-HCG-WNSTMESI-------VNGVPMIVWPLYAEQKMNATMLTEELRVAIR-S 416 (493)
Q Consensus 350 ~~~~~~~~pq~~---lL~~~~~~~~i~-HgG-~gs~~eal-------~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~-~ 416 (493)
++.+.+++|+.+ ++..+++-++-+ +-| -+++.||+ ++|+|+|+... + +.-..|.. +
T Consensus 266 ~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l~v 334 (406)
T 2hy7_A 266 NVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRFGY 334 (406)
T ss_dssp TEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEEEE
T ss_pred CEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEEEe
Confidence 688889998754 677888432222 233 45789999 99999999865 4 34445665 4
Q ss_pred eccCCCCCccchHHHHHHHHHHhcccc
Q 011099 417 KEVPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 417 ~~~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
+ .-+.++++++|.++++++.
T Consensus 335 ~-------~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 335 T-------PGNADSVIAAITQALEAPR 354 (406)
T ss_dssp C-------TTCHHHHHHHHHHHHHCCC
T ss_pred C-------CCCHHHHHHHHHHHHhCcc
Confidence 3 2378999999999998764
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.27 E-value=0.0027 Score=53.78 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=56.5
Q ss_pred ceeeccCCChh---hhcCCCCcccccc----cCCchHHHHHHHhCC-ceeecccchhcchhhHhhhhheeeeEEeeccCC
Q 011099 350 GLVVPMWAPQP---EILAHPSVGGFLT----HCGWNSTMESIVNGV-PMIVWPLYAEQKMNATMLTEELRVAIRSKEVPS 421 (493)
Q Consensus 350 ~~~~~~~~pq~---~lL~~~~~~~~i~----HgG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~ 421 (493)
++.+ +|+|+. .++..++ ++|. -|.-+++.||+++|+ |+|+... .......+ ++.+. .+
T Consensus 57 ~v~~-g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~-~~~~~--~~----- 122 (166)
T 3qhp_A 57 KAEF-GFVNSNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFA-LDERS--LF----- 122 (166)
T ss_dssp EEEC-CCCCHHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGC-SSGGG--EE-----
T ss_pred eEEE-eecCHHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhc-cCCce--EE-----
Confidence 6777 999865 4678888 5554 244569999999996 9999332 22233333 23232 22
Q ss_pred CCCccchHHHHHHHHHHhcccc-hHHHHHHHHHH
Q 011099 422 EKSVVERGEIEMMVRRIVAEKQ-GHAIRNRVEEL 454 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l 454 (493)
..-+.+++.++|.+++.++. .+++++++++.
T Consensus 123 --~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 154 (166)
T 3qhp_A 123 --EPNNAKDLSAKIDWWLENKLERERMQNEYAKS 154 (166)
T ss_dssp --CTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred --cCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 22478999999999998754 23344444443
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.19 E-value=0.0032 Score=64.50 Aligned_cols=137 Identities=12% Similarity=-0.015 Sum_probs=86.8
Q ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEE--cCCCCCCccccccccCCCCCcccccccccCCCchhHH-hhh
Q 011099 270 ESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVV--RPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFL-IRT 346 (493)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~ 346 (493)
+.++|.+|++.....++.+...++-+++.+..++|.. +..... . ..+-..+. ..+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~-----------------~-----~~~~~~~~~~GI 497 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI-----------------T-----HPYVERFIKSYL 497 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG-----------------G-----HHHHHHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh-----------------h-----HHHHHHHHHcCC
Confidence 3599999999888899999999999999888888754 211100 0 00001111 111
Q ss_pred CCCceeeccCCChhhhc---CCCCccccc---ccCCchHHHHHHHhCCceeecccchhcchhhHhhh----hheeeeEE-
Q 011099 347 RDVGLVVPMWAPQPEIL---AHPSVGGFL---THCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLT----EELRVAIR- 415 (493)
Q Consensus 347 ~~~~~~~~~~~pq~~lL---~~~~~~~~i---~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~----e~~Gvg~~- 415 (493)
. ..+++.+.+|+.+.+ ..++ +|+ ..+|..|++|||++|||+|+++-. ..+.|+. ...|+...
T Consensus 498 ~-~Rv~F~g~~p~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~G~----~~asRvgaSlL~~~GLpE~L 570 (631)
T 3q3e_A 498 G-DSATAHPHSPYHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKTGA----EVHEHIDEGLFKRLGLPEWL 570 (631)
T ss_dssp G-GGEEEECCCCHHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEECCS----SHHHHHHHHHHHHTTCCGGG
T ss_pred C-ccEEEcCCCCHHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEeccCC----cHHHHhHHHHHHhcCCCcce
Confidence 1 246667888876644 6777 443 237889999999999999998742 1222321 24565432
Q ss_pred eeccCCCCCccchHHHHHHHHHHhcccc
Q 011099 416 SKEVPSEKSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 443 (493)
+. -+.++..++..++.+|+.
T Consensus 571 IA--------~d~eeYv~~Av~La~D~~ 590 (631)
T 3q3e_A 571 IA--------NTVDEYVERAVRLAENHQ 590 (631)
T ss_dssp EE--------SSHHHHHHHHHHHHHCHH
T ss_pred ec--------CCHHHHHHHHHHHhCCHH
Confidence 21 256777777778888764
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.00 E-value=0.012 Score=51.36 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=55.4
Q ss_pred ceee-ccCCChh---hhcCCCCccccccc----CCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCC
Q 011099 350 GLVV-PMWAPQP---EILAHPSVGGFLTH----CGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPS 421 (493)
Q Consensus 350 ~~~~-~~~~pq~---~lL~~~~~~~~i~H----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~ 421 (493)
++.+ .+++++. .++..++ ++|.- |.-.++.||+++|+|+|+.... .+...+ ..+.|...+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEec----
Confidence 6877 8999854 5788888 55532 2246889999999999987653 233332 234565543
Q ss_pred CCCccchHHHHHHHHHHhc-ccc
Q 011099 422 EKSVVERGEIEMMVRRIVA-EKQ 443 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~-~~~ 443 (493)
.-+.+++.++|.+++. ++.
T Consensus 164 ---~~~~~~l~~~i~~l~~~~~~ 183 (200)
T 2bfw_A 164 ---AGDPGELANAILKALELSRS 183 (200)
T ss_dssp ---TTCHHHHHHHHHHHHHCCHH
T ss_pred ---CCCHHHHHHHHHHHHhcCHH
Confidence 2378999999999998 754
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.92 E-value=0.03 Score=53.87 Aligned_cols=106 Identities=11% Similarity=0.039 Sum_probs=69.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCchhhhhhccCCCCCCCeE-EEEcCCCCCCCCCCCCc
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSSEQLSKLVNSPDYDILD-IVLLPCIDISGIVCTDA 81 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~ 81 (493)
..++|+++-..+.||+.-...+.+.|+++. +.+|++++.+.+. ..+...| .++ +..++..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~-----~l~~~~p---~vd~vi~~~~~---------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQ-----QVMEYNP---NIDELIVVDKK---------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGG-----GGTSSCT---TCSEEEEECCS----------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchh-----HHHhcCC---CccEEEEeCcc----------
Confidence 458999999999999999999999999876 7999999998753 3344443 333 3333310
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhcCCCC-cEEEECCcchhHHHHHHHcCCeEEE
Q 011099 82 SLVTQIAVMMHESIPALRSTISAMKYRP-TALIVDLFGTEAMAVADEFEMLKYM 134 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~-DlVI~D~~~~~a~~~A~~lgIP~v~ 134 (493)
.....+.. ...+...+++. ++ |++|.-....-...++...|+|..+
T Consensus 69 ~~~~~~~~-----~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 GRHNSISG-----LNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp SHHHHHHH-----HHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cccccHHH-----HHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 01001111 11223334433 89 9999666555566688888999655
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.85 E-value=0.002 Score=61.81 Aligned_cols=108 Identities=16% Similarity=0.154 Sum_probs=75.1
Q ss_pred ceeeccCCChhhh---cCCCCcccccccCCc---------hHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEee
Q 011099 350 GLVVPMWAPQPEI---LAHPSVGGFLTHCGW---------NSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSK 417 (493)
Q Consensus 350 ~~~~~~~~pq~~l---L~~~~~~~~i~HgG~---------gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~ 417 (493)
|+.+.+|+|+.++ |..++.+++..-+.+ +-+.|+|++|+|+|+.+ ...++..+ ++.|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 7888899999775 445566555533323 35789999999999865 45677777 6889999864
Q ss_pred ccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 011099 418 EVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIA 476 (493)
Q Consensus 418 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 476 (493)
+.+++.+++.++. ++..++|++++++.++.++. |-.....+.+.+
T Consensus 290 ---------~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~ 334 (339)
T 3rhz_A 290 ---------DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILRK----GFFTRRLLTESV 334 (339)
T ss_dssp ---------SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHH
T ss_pred ---------CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHH
Confidence 3578888888764 34456788999888877544 444334444433
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.73 E-value=0.019 Score=61.10 Aligned_cols=102 Identities=18% Similarity=0.267 Sum_probs=72.2
Q ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhh-hC
Q 011099 269 HESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIR-TR 347 (493)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-~~ 347 (493)
+..++|.+|.+....+++.+..-++-|++.+..++|....+... + ..+-..+... +.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~-----------------~-----~~l~~~~~~~gi~ 578 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG-----------------E-----PNIQQYAQNMGLP 578 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG-----------------H-----HHHHHHHHHTTCC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH-----------------H-----HHHHHHHHhcCCC
Confidence 44599999999889999999999999999999999988544210 0 1111111110 11
Q ss_pred CCceeeccCCChhhhc---CCCCcccccc---cCCchHHHHHHHhCCceeecc
Q 011099 348 DVGLVVPMWAPQPEIL---AHPSVGGFLT---HCGWNSTMESIVNGVPMIVWP 394 (493)
Q Consensus 348 ~~~~~~~~~~pq~~lL---~~~~~~~~i~---HgG~gs~~eal~~GvP~l~~P 394 (493)
...+++.+.+|..+.| ..++ +++- .+|..|++|||++|||+|.+|
T Consensus 579 ~~r~~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 579 QNRIIFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GGGEEEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred cCeEEECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 2246666888865544 4566 6654 789999999999999999998
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.37 E-value=0.088 Score=50.36 Aligned_cols=103 Identities=13% Similarity=0.032 Sum_probs=63.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCchhhhhhccCCCCCCCe-EEEEcCCCCCCCCCCCCcch
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSSEQLSKLVNSPDYDIL-DIVLLPCIDISGIVCTDASL 83 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i-~~~~l~~~~~~~~~~~~~~~ 83 (493)
|+|+++.....|++.=...+.++|+++. +.+|++++.+.+. ..+...| .+ ++..++. ... ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~-----~l~~~~p---~i~~v~~~~~---~~~----~~- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCR-----PLLSRMP---EVNEAIPMPL---GHG----AL- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGH-----HHHTTCT---TEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchh-----HHHhcCC---ccCEEEEecC---Ccc----cc-
Confidence 5899999888899999999999999875 7999999987542 2344443 34 3333321 000 00
Q ss_pred HHHHHHHHHHhhHHHHHHHHhc-CCCCcEEEECCcchhHHHHHHHcCCeEEE
Q 011099 84 VTQIAVMMHESIPALRSTISAM-KYRPTALIVDLFGTEAMAVADEFEMLKYM 134 (493)
Q Consensus 84 ~~~~~~~~~~~~~~l~~ll~~~-~~~~DlVI~D~~~~~a~~~A~~lgIP~v~ 134 (493)
....+.++.+.+ ..+||++|.-....-...++...|+|...
T Consensus 65 ----------~~~~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 ----------EIGERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ----------CHHHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ----------chHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011223334444 34899999333334455677888999744
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.57 E-value=0.59 Score=45.87 Aligned_cols=79 Identities=11% Similarity=-0.008 Sum_probs=54.5
Q ss_pred ceeeccCCChhh---hcCCCCcccccc--c-CCc-hHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCC
Q 011099 350 GLVVPMWAPQPE---ILAHPSVGGFLT--H-CGW-NSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSE 422 (493)
Q Consensus 350 ~~~~~~~~pq~~---lL~~~~~~~~i~--H-gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~ 422 (493)
++.+.+++|+.+ ++..++ +||. . =|. +++.||+++|+|.|+ -..+ ....+ ++-..|..++
T Consensus 296 ~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~----- 362 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE----- 362 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES-----
T ss_pred cEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC-----
Confidence 577779998754 677788 5553 2 133 468999999999998 3222 22333 4444576653
Q ss_pred CCccchHHHHHHHHHHhcccc
Q 011099 423 KSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 423 ~~~~~~~~l~~ai~~vl~~~~ 443 (493)
.-+.++++++|.++++|+.
T Consensus 363 --~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 363 --QLNPENIAETLVELCMSFN 381 (413)
T ss_dssp --SCSHHHHHHHHHHHHHHTC
T ss_pred --CCCHHHHHHHHHHHHcCHH
Confidence 2478999999999999876
No 56
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=88.84 E-value=3.4 Score=36.48 Aligned_cols=156 Identities=12% Similarity=-0.046 Sum_probs=78.4
Q ss_pred cccCCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhH
Q 011099 263 WLDKQPHESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGF 342 (493)
Q Consensus 263 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 342 (493)
|++-. .++++.|+.|. .-...++.|...|..+.++-. ...+.+
T Consensus 26 fl~L~-gk~VLVVGgG~-------va~~ka~~Ll~~GA~VtVvap-----------------------------~~~~~l 68 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGT-------IATRRIKGFLQEGAAITVVAP-----------------------------TVSAEI 68 (223)
T ss_dssp EECCT-TCCEEEECCSH-------HHHHHHHHHGGGCCCEEEECS-----------------------------SCCHHH
T ss_pred EEEcC-CCEEEEECCCH-------HHHHHHHHHHHCCCEEEEECC-----------------------------CCCHHH
Confidence 44443 45588887663 344556777778888776542 122223
Q ss_pred HhhhCCCceeeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceeeccc-chhcchhhHhh----hhheeeeEEee
Q 011099 343 LIRTRDVGLVVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPL-YAEQKMNATML----TEELRVAIRSK 417 (493)
Q Consensus 343 ~~~~~~~~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~-~~DQ~~na~~v----~e~~Gvg~~~~ 417 (493)
.......++.+....-+.+.|..++ ++|.--|.-.+.+.++.-.- ..+|+ ..|.+..+..+ .+.-++-+.+.
T Consensus 69 ~~l~~~~~i~~i~~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIS 145 (223)
T 3dfz_A 69 NEWEAKGQLRVKRKKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAIS 145 (223)
T ss_dssp HHHHHTTSCEEECSCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEE
T ss_pred HHHHHcCCcEEEECCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEE
Confidence 2222222232222222334567777 88888887777666664332 34443 24555444221 12222333332
Q ss_pred ccCCCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Q 011099 418 EVPSEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKA 461 (493)
Q Consensus 418 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a 461 (493)
+-. ....-+..|++.|.+.+. +....+-+.+.++++.+++.
T Consensus 146 T~G--~sP~la~~iR~~ie~~lp-~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 146 TDG--ASPLLTKRIKEDLSSNYD-ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp CTT--SCHHHHHHHHHHHHHHSC-THHHHHHHHHHHHHHHHHHC
T ss_pred CCC--CCcHHHHHHHHHHHHHcc-HHHHHHHHHHHHHHHHHHHH
Confidence 110 122345667777777764 33345777788888887764
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.05 E-value=0.36 Score=49.23 Aligned_cols=119 Identities=7% Similarity=-0.031 Sum_probs=64.3
Q ss_pred ceeeccCCChh---hhcCCCCccccccc---CCc-hHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccCCC
Q 011099 350 GLVVPMWAPQP---EILAHPSVGGFLTH---CGW-NSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSE 422 (493)
Q Consensus 350 ~~~~~~~~pq~---~lL~~~~~~~~i~H---gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~ 422 (493)
++.+....+.. .++..++ +||.- =|+ .+++||+++|+|.|+-... .....| ++-.-|......+..
T Consensus 383 ~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~ 455 (536)
T 3vue_A 383 KVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVD 455 (536)
T ss_dssp TEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSC
T ss_pred ceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCc
Confidence 45555666654 3577777 56532 133 4899999999999987553 333333 232223322100000
Q ss_pred ---CCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 011099 423 ---KSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECENS 482 (493)
Q Consensus 423 ---~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 482 (493)
-...+.+.|+++|++++...+.+ .+++..+++++..=|=++.+++..+-.++.
T Consensus 456 g~l~~~~d~~~la~ai~ral~~~~~~-------~~~~~~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 456 CKVVEPSDVKKVAATLKRAIKVVGTP-------AYEEMVRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHTTSH-------HHHHHHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred eeEECCCCHHHHHHHHHHHHHhcCcH-------HHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 02246788999999888521101 122333444555555555566666555543
No 58
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=86.88 E-value=2.5 Score=42.97 Aligned_cols=37 Identities=14% Similarity=0.283 Sum_probs=28.9
Q ss_pred CCEEEEEcC--------CCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVALLAS--------PGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~~~~--------p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+|||+++++ |+.|++ .-+|+++|+++ ||+|++++|..
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~-G~~V~Vi~P~Y 53 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAAN-GHRVMVISPRY 53 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTT-TCEEEEEEECC
T ss_pred CcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHc-CCeEEEEecCc
Confidence 699999973 223343 56899999999 99999999763
No 59
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=85.33 E-value=3.5 Score=40.35 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=55.1
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTD 80 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (493)
|.+++.|++++..+.. + . .+.++.++. |++|+++.+..... ..... ..-.+..++. .
T Consensus 1 M~~~~k~l~Il~~~~~-~-~---~i~~aa~~l-G~~vv~v~~~~~~~------~~~~~--~~d~~~~~~~--~------- 57 (425)
T 3vot_A 1 MTKRNKNLAIICQNKH-L-P---FIFEEAERL-GLKVTFFYNSAEDF------PGNLP--AVERCVPLPL--F------- 57 (425)
T ss_dssp -CCCCCEEEEECCCTT-C-C---HHHHHHHHT-TCEEEEEEETTSCC------CCSCT--TEEEEEEECT--T-------
T ss_pred CCCCCcEEEEECCChh-H-H---HHHHHHHHC-CCEEEEEECCCccc------ccCHh--hccEEEecCC--C-------
Confidence 8889999999975432 2 2 245777788 99999987664211 01110 0112222321 0
Q ss_pred cchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEE--CCcchhHHHHHHHcCCeE
Q 011099 81 ASLVTQIAVMMHESIPALRSTISAMKYRPTALIV--DLFGTEAMAVADEFEMLK 132 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~--D~~~~~a~~~A~~lgIP~ 132 (493)
.+. ....+.+.++.++. ++|.|+. |.....+..+++.+|+|.
T Consensus 58 ~d~--------~~~~~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 58 EDE--------EAAMDVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp TCH--------HHHHHHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCH--------HHHHHHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 111 11122344555555 8999984 444455667899999993
No 60
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=84.15 E-value=6.6 Score=35.33 Aligned_cols=124 Identities=10% Similarity=0.077 Sum_probs=67.1
Q ss_pred CCCEEEEEcCC--CccCHHHHHHHHHHHHhcCCceEEEEEcC------CCCch-hhhhhccCCCCCCCeEEEEcCCCCCC
Q 011099 4 RKPHVALLASP--GMGHLIPVLELGKRLVIQNNHHATIFVVA------NDTSS-EQLSKLVNSPDYDILDIVLLPCIDIS 74 (493)
Q Consensus 4 ~~~~vl~~~~p--~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~------~~~~~-v~~~~~~~~~~~~~i~~~~l~~~~~~ 74 (493)
++|+.+|++.. ..|=-.-.+.|++.|+++ |++|.++=+- .+.+. ..+... ..+ .......+..
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~-G~~V~~fKPv~~g~~~~~~D~~~~~~~~-g~~--~~~~~~~~~~---- 95 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQA-GIDVAVCKPVQTGTARGDDDLAEVGRLA-GVT--QLAGLARYPQ---- 95 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHT-TCCEEEEEEEECCGGGTCCHHHHHHHHH-CCC--EEEEEEECSS----
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCeEEEEeeeecCCCCCCHHHHHHHHHc-CCC--CCCCCeeECC----
Confidence 45665555533 348888999999999999 9999998531 11111 001111 111 0111111110
Q ss_pred CCCCCCcchHHHHHHHH-HHhhHHHHHHHHhcCCCCcEEEECCcc----------hhHHHHHHHcCCeEEEEecch
Q 011099 75 GIVCTDASLVTQIAVMM-HESIPALRSTISAMKYRPTALIVDLFG----------TEAMAVADEFEMLKYMFIASN 139 (493)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~~DlVI~D~~~----------~~a~~~A~~lgIP~v~~~~~~ 139 (493)
+ ............ ....+.+.+.++++..++|+||+|... ....++|+.++.|++.+....
T Consensus 96 ---p-~sP~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 96 ---P-MAPAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp ---S-SCHHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred ---C-CChHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 0 011111100000 112345677777777789999998531 234679999999998876543
No 61
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=83.95 E-value=4.6 Score=36.32 Aligned_cols=112 Identities=11% Similarity=0.062 Sum_probs=57.8
Q ss_pred EEEEEcCCCccCHHH-HHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchHH
Q 011099 7 HVALLASPGMGHLIP-VLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLVT 85 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P-~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (493)
|||+.-=- |--.| +..|+++|++. | +|+++.|...+...-.+.--. ..+++.......... -.+...
T Consensus 3 ~ILlTNDD--Gi~apGi~~L~~~l~~~-g-~V~VvAP~~~~Sg~g~siT~~----~pl~~~~~~~~~~~~--v~GTPa-- 70 (251)
T 2wqk_A 3 TFLLVNDD--GYFSPGINALREALKSL-G-RVVVVAPDRNLSGVGHSLTFT----EPLKMRKIDTDFYTV--IDGTPA-- 70 (251)
T ss_dssp EEEEECSS--CTTCHHHHHHHHHHTTT-S-EEEEEEESSCCTTSCCSCCCS----SCEEEEEEETTEEEE--TTCCHH--
T ss_pred EEEEEcCC--CCCcHHHHHHHHHHHhC-C-CEEEEeeCCCCcccccCcCCC----CCceeEEeeccceee--cCCChH--
Confidence 56666533 33334 67899999998 7 599999887543322221111 234444332110000 011111
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCcEEEEC----------Ccc---hhHHHHHHHcCCeEEEEecc
Q 011099 86 QIAVMMHESIPALRSTISAMKYRPTALIVD----------LFG---TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 86 ~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D----------~~~---~~a~~~A~~lgIP~v~~~~~ 138 (493)
.. ..-.+..++.+ .+||+||+- .++ .+|+.=|..+|||.|.++..
T Consensus 71 DC------V~lal~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 71 DC------VHLGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HH------HHHHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HH------HhhhhhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 11 11122333333 389999972 222 23455677889999998743
No 62
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=83.45 E-value=8.7 Score=34.35 Aligned_cols=40 Identities=10% Similarity=0.180 Sum_probs=28.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCch
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSS 48 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 48 (493)
|||++..=-+. |--=+..|+++|++. | +|+++.|...+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~Sg 40 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEE-H-EVFVVAPDKERSA 40 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCCcC
Confidence 56666654433 223378899999998 7 8999999975443
No 63
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=83.05 E-value=9.3 Score=34.09 Aligned_cols=113 Identities=7% Similarity=-0.011 Sum_probs=59.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCC---Ccc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCT---DAS 82 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~---~~~ 82 (493)
|||++..=-+. |--=+..|+++|++. | +|+++.|...+..+-.+..-. .-+++..++.......... ...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~Sg~g~siTl~----~pl~~~~~~~~~~~~~~~~~~v~GT 73 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQF-G-EVFVAAPDTEQSAAGHAITIA----HPVRAYPHPSPLHAPHFPAYRVRGT 73 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEECSSCCCCCSSCCCS----SCBEEEECCCCTTSCCCCEEEEESC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCCcCCcccccCC----CCeEEEEeccCcCCCCCceEEEcCc
Confidence 56766654433 223378899999998 7 899999997544332222212 2366665543110000000 001
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEEC----------Cc---chhHHHHHHHcCCeEEEEec
Q 011099 83 LVTQIAVMMHESIPALRSTISAMKYRPTALIVD----------LF---GTEAMAVADEFEMLKYMFIA 137 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D----------~~---~~~a~~~A~~lgIP~v~~~~ 137 (493)
.. .. ... .+. + ..+||+||+- .+ +.+|+.=|..+|||.|.++.
T Consensus 74 Pa-DC---V~l---al~--l---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 74 PA-DC---VAL---GLH--L---FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HH-HH---HHH---HHH--H---SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HH-HH---HHH---HHc--C---CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 11 11 111 111 2 3489999963 22 23345567789999999875
No 64
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=82.87 E-value=13 Score=33.32 Aligned_cols=39 Identities=15% Similarity=0.171 Sum_probs=29.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTS 47 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 47 (493)
|||++..=-+. |--=+..|+++|++. | +|+++.|...+.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~S 40 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhc-C-CEEEEecCCCcc
Confidence 67887775443 334478899999998 7 999999997544
No 65
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=80.05 E-value=9.9 Score=34.13 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=28.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCch
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSS 48 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 48 (493)
|||++..=-+. |--=+..|+++|++. | +|+++.|...+..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~-g-~V~VVAP~~~~Sg 41 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREF-A-DVQVVAPDRNRSG 41 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCTT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhC-C-cEEEEeeCCCCcC
Confidence 67777764443 333477899999887 5 9999999975443
No 66
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=79.69 E-value=11 Score=34.31 Aligned_cols=39 Identities=10% Similarity=0.047 Sum_probs=27.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTS 47 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 47 (493)
|||++..=-+. +--=+..|+++|++. | +|+++.|...+.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~-g-~V~VVAP~~~qS 39 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSL-G-DVDVVAPESPKS 39 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGG-S-EEEEEEESSCTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCCc
Confidence 56766654433 223378899999998 7 999999997544
No 67
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=77.37 E-value=1.3 Score=43.39 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCc-----cCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 4 RKPHVALLASPGM-----GHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 4 ~~~~vl~~~~p~~-----GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
++|||++++.... |=......+|++|+++ ||+|+++++..
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 4699988884422 4445689999999999 99999999874
No 68
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=76.74 E-value=21 Score=30.66 Aligned_cols=101 Identities=7% Similarity=0.070 Sum_probs=59.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCC-CchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAND-TSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLV 84 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~-~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (493)
-.|++++..+.|--.-.+.+|-+...+ |++|.|+..-.. ...-+...+... ++.+..... +.... ....
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~~~~gE~~~l~~L----~v~~~~~g~----gf~~~-~~~~ 98 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGTWPNGERNLLEPH----GVEFQVMAT----GFTWE-TQNR 98 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCSSCCHHHHHHGGG----TCEEEECCT----TCCCC-GGGH
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCCCCccHHHHHHhC----CcEEEEccc----ccccC-CCCc
Confidence 468888888899999999999999999 999999975542 111122233332 256665553 11011 1111
Q ss_pred HHHHHHHHHhhHHHHHHHHhc-CCCCcEEEECCcch
Q 011099 85 TQIAVMMHESIPALRSTISAM-KYRPTALIVDLFGT 119 (493)
Q Consensus 85 ~~~~~~~~~~~~~l~~ll~~~-~~~~DlVI~D~~~~ 119 (493)
..-... ....+..+.+.+ +.++|+||.|-+..
T Consensus 99 ~~~~~~---a~~~l~~a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 99 EADTAA---CMAVWQHGKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp HHHHHH---HHHHHHHHHHHTTCTTCSEEEEETHHH
T ss_pred HHHHHH---HHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 111112 222333333333 45899999998654
No 69
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=76.43 E-value=8.5 Score=34.61 Aligned_cols=40 Identities=18% Similarity=0.103 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTS 47 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 47 (493)
+|||++..=-+. |---+..|+++|++ +|+|+++.|...+.
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~--~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD--LGEVDVVAPDRNRS 50 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT--TSEEEEEEESSCCT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh--cCCEEEEecCCCCc
Confidence 599998875544 33447778888876 58999999997544
No 70
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=76.41 E-value=13 Score=32.44 Aligned_cols=112 Identities=12% Similarity=0.076 Sum_probs=58.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHh-cCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVI-QNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCT 79 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 79 (493)
|+.+++||+++..+.-+.+..+ .++..+ . +++|..+.+........ ..... .++.+..++.....
T Consensus 1 ~~~~~~riavl~SG~Gsnl~al---l~~~~~~~-~~eI~~Vis~~~~a~~~-~~A~~----~gIp~~~~~~~~~~----- 66 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQAI---IGAIQKGL-AIEIRAVISNRADAYGL-KRAQQ----ADIPTHIIPHEEFP----- 66 (215)
T ss_dssp ---CCEEEEEEESSCCHHHHHH---HHHHHTTC-SEEEEEEEESCTTCHHH-HHHHH----TTCCEEECCGGGSS-----
T ss_pred CCCCCcEEEEEEeCCcHHHHHH---HHHHHcCC-CCEEEEEEeCCcchHHH-HHHHH----cCCCEEEeCccccC-----
Confidence 7778899999987765554444 444443 4 58888877653322211 01111 14555444321110
Q ss_pred CcchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc-hhHHHHHHHcCCeEEEEecc
Q 011099 80 DASLVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFG-TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~-~~a~~~A~~lgIP~v~~~~~ 138 (493)
+- ....+.+.+.++++ ++|+||+-.+. .-...+-+.....++=++++
T Consensus 67 --~r--------~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 67 --SR--------TDFESTLQKTIDHY--DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp --SH--------HHHHHHHHHHHHTT--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --ch--------hHhHHHHHHHHHhc--CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00 11133567777777 99999976443 22334445555556666544
No 71
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=67.17 E-value=31 Score=31.14 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=31.7
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 4 RKPHVALLA--SPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 4 ~~~~vl~~~--~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+++++++++ -|+.|=-.-...||..|++. |.+|.++-...
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~-G~rVLLID~D~ 121 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQA-GYKTLIVDGDM 121 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 345565554 36789999999999999999 99999987654
No 72
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=65.75 E-value=7.9 Score=33.47 Aligned_cols=43 Identities=26% Similarity=0.184 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCCccCHH-HHHHHHHHHHhcCCceEEEEEcCCC
Q 011099 1 MEIRKPHVALLASPGMGHLI-PVLELGKRLVIQNNHHATIFVVAND 45 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~-P~l~LA~~L~~r~Gh~Vt~~~~~~~ 45 (493)
|.-+.+||++-..|+ +..+ =.+.+.+.|+++ |++|.++.++.-
T Consensus 3 m~l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~-g~eV~vv~T~~A 46 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGS-HCTYHEVLPQMERLVEL-GAKVTPFVTHTV 46 (201)
T ss_dssp CCCTTCEEEEECCSC-GGGGGGTHHHHHHHHHT-TCEEEEECSSCS
T ss_pred CCcCCCEEEEEEECh-HHHHHHHHHHHHHHhhC-CCEEEEEEChhH
Confidence 555668999988888 4555 789999999999 999999998854
No 73
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=65.43 E-value=37 Score=28.61 Aligned_cols=37 Identities=14% Similarity=0.197 Sum_probs=29.7
Q ss_pred EEEEE--cCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 7 HVALL--ASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 7 ~vl~~--~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+++.+ +-++.|=-.-...||..|+++ |++|.++-...
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 44444 356778899999999999999 99999987664
No 74
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=64.46 E-value=10 Score=30.45 Aligned_cols=43 Identities=12% Similarity=-0.024 Sum_probs=36.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCch
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSS 48 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 48 (493)
+.+|++.+.++.+|-....-++..|+.+ |++|..+......+.
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~-G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNA-GFNVVNIGVLSPQEL 45 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHT-TCEEEEEEEEECHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHC-CCEEEECCCCCCHHH
Confidence 4689999999999999999999999999 999998876543333
No 75
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=63.45 E-value=22 Score=30.43 Aligned_cols=42 Identities=7% Similarity=-0.047 Sum_probs=31.3
Q ss_pred HHHHHHHhc-CCCCcEEEECCcchhHHHHHHHcCCeEEEEecchHH
Q 011099 97 ALRSTISAM-KYRPTALIVDLFGTEAMAVADEFEMLKYMFIASNAW 141 (493)
Q Consensus 97 ~l~~ll~~~-~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~~~~~ 141 (493)
.+.+.++++ ..++|+||.|.. +..+|+++|+|.+.+.++..+
T Consensus 130 e~~~~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 130 EITTLISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GHHHHHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 445555555 459999999874 578999999999998875533
No 76
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=63.28 E-value=19 Score=31.64 Aligned_cols=129 Identities=13% Similarity=0.048 Sum_probs=64.4
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhcCCceEEEEE----cCCCCch-h--hhhhccCCCCCCCeEEEEcCCCCCCC
Q 011099 5 KPHVALLAS--PGMGHLIPVLELGKRLVIQNNHHATIFV----VANDTSS-E--QLSKLVNSPDYDILDIVLLPCIDISG 75 (493)
Q Consensus 5 ~~~vl~~~~--p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~----~~~~~~~-v--~~~~~~~~~~~~~i~~~~l~~~~~~~ 75 (493)
+|+.+|++. ...|=-.-...|++.|+++ |++|.++= ....... . ......... ..............
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~-G~~V~~~KPv~~g~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~~~~- 78 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQ-NIKSLCLKPVASGQSQFSELCEDVESILNAYK--HKFTAAEINLISFN- 78 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEECSEEESBCSSSSSBHHHHHHHHHTT--TSSCHHHHCSEEES-
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHC-CCeeEEecceeecCccCCCCCChHHHHHHhcC--CCCChhhEEEEEEC-
Confidence 455554443 3458899999999999999 99999974 2222110 0 000000000 00000000000000
Q ss_pred CCCCCcchHHHHHHHHHHhhHHHHHHHHh-cCCCCcEEEECCcc---------hhHHHHHHHcCCeEEEEecch
Q 011099 76 IVCTDASLVTQIAVMMHESIPALRSTISA-MKYRPTALIVDLFG---------TEAMAVADEFEMLKYMFIASN 139 (493)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-~~~~~DlVI~D~~~---------~~a~~~A~~lgIP~v~~~~~~ 139 (493)
..................+.+.+.+++ +..++|+||+|... ....++|..++.|++.+....
T Consensus 79 --~p~sp~~aa~~~~~~i~~~~i~~~~~~~l~~~~D~vlIEgaggl~~p~~~~~~~adla~~l~~pviLV~~~~ 150 (228)
T 3of5_A 79 --QAVAPHIIAAKTKVDISIENLKQFIEDKYNQDLDILFIEGAGGLLTPYSDHTTQLDLIKALQIPVLLVSAIK 150 (228)
T ss_dssp --SSSCHHHHHHHTTCCCCHHHHHHHHHGGGGSSCSEEEEEEEEETTCBSSSSCBHHHHHHHHTCCEEEEEECS
T ss_pred --CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHccCCEEEEECCCccccccccchhHHHHHHHcCCCEEEEEcCC
Confidence 000011000000001133456677776 55689999988421 135779999999988876543
No 77
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=62.82 E-value=13 Score=38.70 Aligned_cols=44 Identities=18% Similarity=0.063 Sum_probs=30.8
Q ss_pred eeeccCCCh---------hhhcCCCCccccccc---CC-chHHHHHHHhCCceeecccc
Q 011099 351 LVVPMWAPQ---------PEILAHPSVGGFLTH---CG-WNSTMESIVNGVPMIVWPLY 396 (493)
Q Consensus 351 ~~~~~~~pq---------~~lL~~~~~~~~i~H---gG-~gs~~eal~~GvP~l~~P~~ 396 (493)
+.+..|++. .+++..++ +||.- =| -.+.+||+++|+|.|+--..
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 344477765 45777888 55543 23 35899999999999997654
No 78
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=61.70 E-value=9.6 Score=33.14 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAND 45 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 45 (493)
|+++ +||++-..|+.|-+. ...|.+.|+++ |++|.++.++.-
T Consensus 1 m~~~-k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~~A 42 (209)
T 3zqu_A 1 MSGP-ERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISKAA 42 (209)
T ss_dssp CCSC-SEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECHHH
T ss_pred CCCC-CEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECccH
Confidence 5554 789988889888777 89999999999 999999998853
No 79
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=61.49 E-value=17 Score=35.79 Aligned_cols=46 Identities=15% Similarity=0.181 Sum_probs=39.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhh
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLS 52 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~ 52 (493)
--+++...|+.|=-.-.+.+|...+.+ |..|.|++.+...+.+...
T Consensus 198 ~liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEms~~ql~~R 243 (444)
T 3bgw_A 198 NFVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKKENIKR 243 (444)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSSCTTHHHHH
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCCCHHHHHHH
Confidence 347888889999999999999999999 9999999999876665444
No 80
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=60.75 E-value=1.3e+02 Score=29.45 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=49.6
Q ss_pred hhcCCCCcccccccCCchH-----HHHHHHhCCceeecccchhcchhhHhh-----h-hheeeeEEeeccCCCCCccchH
Q 011099 361 EILAHPSVGGFLTHCGWNS-----TMESIVNGVPMIVWPLYAEQKMNATML-----T-EELRVAIRSKEVPSEKSVVERG 429 (493)
Q Consensus 361 ~lL~~~~~~~~i~HgG~gs-----~~eal~~GvP~l~~P~~~DQ~~na~~v-----~-e~~Gvg~~~~~~~~~~~~~~~~ 429 (493)
+.|..++ ++|.--|.-. ..+|-..|+|.-+ .|.+..+... . ...-+|+.-. . +...-+.
T Consensus 68 ~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~----~d~~e~~~~~~pa~~~~~~l~iaIsT~--G--ksp~la~ 137 (457)
T 1pjq_A 68 TLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNV----VDAPKAASFIMPSIIDRSPLMVAVSSG--G--TSPVLAR 137 (457)
T ss_dssp GGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEE----TTCTTSSSEECCEEEEETTEEEEEECT--T--SCHHHHH
T ss_pred cccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEE----CCCcccCceEeeeEEEeCCeEEEEECC--C--CChHHHH
Confidence 3355666 7887777654 3445667888632 2333333221 0 1234555521 1 1223367
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Q 011099 430 EIEMMVRRIVAEKQGHAIRNRVEELKHSAQKA 461 (493)
Q Consensus 430 ~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a 461 (493)
.|++.|++.|.. ....+-+.+.++++.+++.
T Consensus 138 ~ir~~ie~~l~~-~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 138 LLREKLESLLPQ-HLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHSCT-THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcch-hHHHHHHHHHHHHHHHHhh
Confidence 788888888754 3234667777777777664
No 81
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=60.31 E-value=47 Score=32.93 Aligned_cols=107 Identities=13% Similarity=0.062 Sum_probs=65.9
Q ss_pred eccCCChhh---hcCCCCcccccc---cCCch-HHHHHHHhCC-----ceeecccchhcchhhHhhhhheeeeEEeeccC
Q 011099 353 VPMWAPQPE---ILAHPSVGGFLT---HCGWN-STMESIVNGV-----PMIVWPLYAEQKMNATMLTEELRVAIRSKEVP 420 (493)
Q Consensus 353 ~~~~~pq~~---lL~~~~~~~~i~---HgG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~ 420 (493)
+.+++++.+ ++..++ +||. .=|+| ++.||+++|+ |.|+--+.+ .+..+ .-|..++
T Consensus 336 ~~g~v~~~el~~ly~~AD--v~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~--- 402 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSD--VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN--- 402 (482)
T ss_dssp ECSCCCHHHHHHHHHHCS--EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC---
T ss_pred eCCCCCHHHHHHHHHHcc--EEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC---
Confidence 457888765 566677 4543 34555 8899999998 666544322 22222 1255542
Q ss_pred CCCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 011099 421 SEKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECENS 482 (493)
Q Consensus 421 ~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 482 (493)
..+.++++++|.++|+++.. ..+++.++.++.+++ -+...-++.+++.++..
T Consensus 403 ----p~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 ----PYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp ----TTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred ----CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 34789999999999986431 133444444444333 24567788888888765
No 82
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=59.67 E-value=42 Score=30.77 Aligned_cols=39 Identities=8% Similarity=0.184 Sum_probs=30.8
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVALLA--SPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~~~--~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
++++++++ -|+.|=-.-...||..|++. |.+|.++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQS-DQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 44554444 36789999999999999999 99999987654
No 83
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=59.45 E-value=37 Score=33.78 Aligned_cols=119 Identities=10% Similarity=-0.009 Sum_probs=70.2
Q ss_pred eeeccCCChhh---hcCCCCcccccc--cCCchH-HHHHHHhC---CceeecccchhcchhhHhhhhheeeeEEeeccCC
Q 011099 351 LVVPMWAPQPE---ILAHPSVGGFLT--HCGWNS-TMESIVNG---VPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPS 421 (493)
Q Consensus 351 ~~~~~~~pq~~---lL~~~~~~~~i~--HgG~gs-~~eal~~G---vP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~ 421 (493)
+++.+.+|+.+ ++..+++ ++++ .=|+|- ..|++++| .|+|+--+.+ .+..+ .. -|+.++
T Consensus 354 V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~~--~allVn---- 421 (496)
T 3t5t_A 354 VRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-GE--YCRSVN---- 421 (496)
T ss_dssp EEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-GG--GSEEEC----
T ss_pred EEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-CC--CEEEEC----
Confidence 55557788754 4556774 2222 468885 58999996 5655543322 22222 11 256653
Q ss_pred CCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhcchhhhhhh
Q 011099 422 EKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECENSLQFTQEKA 490 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (493)
..+.++++++|.++|+.+. ++-+++.+++.+.+++ -....-++.|+++++..+..+..-|
T Consensus 422 ---P~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~~~~~~~~~ 481 (496)
T 3t5t_A 422 ---PFDLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAADHAARTATA 481 (496)
T ss_dssp ---TTBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHHHHHC----
T ss_pred ---CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhcccchhhhh
Confidence 3588999999999998753 2244555555555332 3456778889999887654443333
No 84
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=58.75 E-value=9.7 Score=33.05 Aligned_cols=42 Identities=10% Similarity=0.100 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCCCccCHHH-HHHHHHHHHhcCCceEEEEEcCC
Q 011099 1 MEIRKPHVALLASPGMGHLIP-VLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P-~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|.-+.+||++...|+ +..+- ...+.+.|+++ |++|.++.++.
T Consensus 1 m~l~~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~ 43 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYT 43 (207)
T ss_dssp -CCTTCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC-
T ss_pred CCCCCCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehH
Confidence 555667899888887 45665 78999999999 99999999885
No 85
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=58.04 E-value=28 Score=30.98 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=31.7
Q ss_pred hHHHHHHHHhcCCCCcEEEECCcc---------hhHHHHHHHcCCeEEEEecc
Q 011099 95 IPALRSTISAMKYRPTALIVDLFG---------TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 95 ~~~l~~ll~~~~~~~DlVI~D~~~---------~~a~~~A~~lgIP~v~~~~~ 138 (493)
.+.+.+.++++..++|+||+|... ....++|+.++.|++.+...
T Consensus 118 ~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~ 170 (242)
T 3qxc_A 118 TDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHD 170 (242)
T ss_dssp HHHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcC
Confidence 345666666665689999988521 13467999999999888654
No 86
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=57.58 E-value=7.2 Score=36.37 Aligned_cols=42 Identities=12% Similarity=0.040 Sum_probs=37.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTS 47 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~ 47 (493)
|+|+++-..+.||+.=...+.++|+++. +.+|++++.+.+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~ 43 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQ 43 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhH
Confidence 5899999999999999999999999876 79999999987543
No 87
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=56.31 E-value=8.4 Score=31.94 Aligned_cols=52 Identities=10% Similarity=-0.000 Sum_probs=40.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccC
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVN 56 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~ 56 (493)
++.+|++.+.++.+|-....-++..|... |++|.++......+.+.......
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~-G~eVi~lG~~~p~e~lv~aa~~~ 68 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDA-GFEVVYTGLRQTPEQVAMAAVQE 68 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHT-TCEEECCCSBCCHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHHHHHhc
Confidence 35899999999999999999999999999 99999987654433433443333
No 88
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=55.98 E-value=72 Score=27.63 Aligned_cols=107 Identities=7% Similarity=-0.016 Sum_probs=55.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCc--eEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcch
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNH--HATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASL 83 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh--~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (493)
+||+|+..++. .-+..+.++|.+. +| +|..+.+......+.. .... .++.+..++.... .+
T Consensus 2 ~rI~vl~SG~g---~~~~~~l~~l~~~-~~~~~i~~Vvs~~~~~~~~~-~A~~----~gIp~~~~~~~~~-------~~- 64 (216)
T 2ywr_A 2 LKIGVLVSGRG---SNLQAIIDAIESG-KVNASIELVISDNPKAYAIE-RCKK----HNVECKVIQRKEF-------PS- 64 (216)
T ss_dssp EEEEEEECSCC---HHHHHHHHHHHTT-SSCEEEEEEEESCTTCHHHH-HHHH----HTCCEEECCGGGS-------SS-
T ss_pred CEEEEEEeCCc---HHHHHHHHHHHhC-CCCCeEEEEEeCCCChHHHH-HHHH----cCCCEEEeCcccc-------cc-
Confidence 47888876654 3467777888887 77 7765554432222111 1111 1344443322111 01
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc-hhHHHHHHHcCCeEEEEecc
Q 011099 84 VTQIAVMMHESIPALRSTISAMKYRPTALIVDLFG-TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 84 ~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~-~~a~~~A~~lgIP~v~~~~~ 138 (493)
.....+.+.+.++++ ++|++|+-.+. .-...+-+.....++=++++
T Consensus 65 -------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 -------KKEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -------hhhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 011223456677777 99999976442 22333444555556666543
No 89
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=55.08 E-value=18 Score=31.91 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=32.4
Q ss_pred hHHHHHHHHhcCCCCcEEEECCcchh-------HHHHHHHcCCeEEEEe
Q 011099 95 IPALRSTISAMKYRPTALIVDLFGTE-------AMAVADEFEMLKYMFI 136 (493)
Q Consensus 95 ~~~l~~ll~~~~~~~DlVI~D~~~~~-------a~~~A~~lgIP~v~~~ 136 (493)
.+.+.++++++..+||++++|..... |..+.-.+|+|+|.+.
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 35566677777668999999976554 5568888999999975
No 90
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=54.12 E-value=61 Score=32.18 Aligned_cols=93 Identities=5% Similarity=-0.096 Sum_probs=54.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchHH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLVT 85 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (493)
.+|+++.-+ .| .+.+++.|.+. |-+|+.+++...............+ .+... ....+
T Consensus 349 Krv~i~g~~--~~---~~~la~~L~El-Gm~vv~~gt~~~~~~d~~~l~~~~~--~~~~i------------~~~~d--- 405 (492)
T 3u7q_A 349 KRVMLYIGG--LR---PRHVIGAYEDL-GMEVVGTGYEFAHNDDYDRTMKEMG--DSTLL------------YDDVT--- 405 (492)
T ss_dssp CEEEECBSS--SH---HHHTHHHHHTT-TCEEEEEEESSCCHHHHHHHHTTSC--TTCEE------------EESCB---
T ss_pred CEEEEECCC--ch---HHHHHHHHHHC-CCEEEEEeCCCCCHHHHHHHHHhCC--CCcEE------------EcCCC---
Confidence 577776544 23 46677888888 9999987766322211111111111 00000 00011
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEE
Q 011099 86 QIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMF 135 (493)
Q Consensus 86 ~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~ 135 (493)
...+.+++++. +||++|.... ...+|+++|||++.+
T Consensus 406 ---------~~el~~~i~~~--~pDL~ig~~~---~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 406 ---------GYEFEEFVKRI--KPDLIGSGIK---EKFIFQKMGIPFREM 441 (492)
T ss_dssp ---------HHHHHHHHHHH--CCSEEEECHH---HHHHHHHTTCCEEES
T ss_pred ---------HHHHHHHHHhc--CCcEEEeCcc---hhHHHHHcCCCEEec
Confidence 22456777776 9999999753 467899999999864
No 91
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=54.02 E-value=62 Score=29.40 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=31.1
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhcCCceEEEEEcCCC
Q 011099 5 KPHVALLA--SPGMGHLIPVLELGKRLVIQNNHHATIFVVAND 45 (493)
Q Consensus 5 ~~~vl~~~--~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 45 (493)
+.++++++ -|+.|=-.-...||..|++. |.+|.++-....
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQT-NKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTT-TCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCCEEEEeccCC
Confidence 34454443 46779999999999999999 999999876643
No 92
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=53.17 E-value=22 Score=31.89 Aligned_cols=48 Identities=13% Similarity=-0.096 Sum_probs=40.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhh
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLS 52 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~ 52 (493)
.+.+|++.+.++..|-....-++..|..+ |++|.++......+.+...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~-G~~Vi~LG~~vp~e~l~~~ 169 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRAN-GYNVVDLGRDVPAEEVLAA 169 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHT-TCEEEEEEEECCSHHHHHH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHHH
Confidence 35789999999999999999999999999 9999999876544444333
No 93
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=52.28 E-value=1.2e+02 Score=26.50 Aligned_cols=109 Identities=8% Similarity=-0.049 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcch
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASL 83 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (493)
.++|+|+..++.. .+.++.++|.+.. +++|..+.+......+.. .... .++.+..++..... +
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~-~A~~----~gIp~~~~~~~~~~-------~- 85 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLE-RARR----AGVDALHMDPAAYP-------S- 85 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHH-HHHH----TTCEEEECCGGGSS-------S-
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHH-HHHH----cCCCEEEECccccc-------c-
Confidence 3699999776642 3667777887652 478766665532222211 1111 15665544321110 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCc-chhHHHHHHHcCCeEEEEecc
Q 011099 84 VTQIAVMMHESIPALRSTISAMKYRPTALIVDLF-GTEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 84 ~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~-~~~a~~~A~~lgIP~v~~~~~ 138 (493)
. ....+.+.+.++++ ++|+||+-.+ -.-...+-+.+...++=++++
T Consensus 86 r-------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 R-------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp H-------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred h-------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 11223456777777 9999997644 233334445555566666543
No 94
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=51.75 E-value=44 Score=33.13 Aligned_cols=93 Identities=11% Similarity=-0.079 Sum_probs=53.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchHH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLVT 85 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (493)
.+|+++.-+ .+. +.+++.|.+. |-+|+.+.+............... . .....-...+
T Consensus 333 Krv~i~~~~--~~~---~~l~~~L~El-Gmevv~~gt~~~~~~d~~~~~~~l-----------~---~~~~i~~d~d--- 389 (483)
T 3pdi_A 333 KRVLLYTGG--VKS---WSVVSALQDL-GMKVVATGTKKSTEEDKARIRELM-----------G---DDVKMLDEGN--- 389 (483)
T ss_dssp CEEEEECSS--SCH---HHHHHHHHHH-TCEEEEECBSSSCHHHHHHHHHHS-----------C---SSCCBCCSCS---
T ss_pred CEEEEECCC--chH---HHHHHHHHHC-CCEEEEEecCCCCHHHHHHHHHhc-----------C---CCCEEEeCCC---
Confidence 578887655 343 4566677788 999998766532221111111100 0 0000001111
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEE
Q 011099 86 QIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMF 135 (493)
Q Consensus 86 ~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~ 135 (493)
...+.+++++. +||++|.... ...+|+++|||++.+
T Consensus 390 ---------~~el~~~i~~~--~pDL~ig~~~---~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ---------ARVLLKTVDEY--QADILIAGGR---NMYTALKGRVPFLDI 425 (483)
T ss_dssp ---------HHHHHHHHHHT--TCSEEECCGG---GHHHHHHTTCCBCCC
T ss_pred ---------HHHHHHHHHhc--CCCEEEECCc---hhHHHHHcCCCEEEe
Confidence 22456677776 9999998654 557899999998764
No 95
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=50.24 E-value=1.7e+02 Score=27.56 Aligned_cols=38 Identities=13% Similarity=-0.093 Sum_probs=28.9
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|.+.+++|+++..+ .-...++++++++ |++|..+....
T Consensus 7 m~~~~~~ili~g~g-----~~~~~~~~a~~~~-G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSG-----ELGKEVAIECQRL-GVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCS-----HHHHHHHHHHHTT-TCEEEEEESST
T ss_pred CCCCCCEEEEECCC-----HHHHHHHHHHHHc-CCEEEEEECCC
Confidence 55566899998543 2357789999999 99998887654
No 96
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=49.36 E-value=19 Score=31.19 Aligned_cols=40 Identities=15% Similarity=-0.074 Sum_probs=36.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAND 45 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 45 (493)
+.+|++.+.++..|-....-++..|..+ |++|.++.....
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~-G~~v~~LG~~vp 127 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESG-GFTVYNLGVDIE 127 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHT-TCEEEECCSSBC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHC-CCEEEECCCCCC
Confidence 4689999999999999999999999999 999999886543
No 97
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=49.18 E-value=13 Score=32.16 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-cCCceEEEEEcCCC
Q 011099 3 IRKPHVALLASPGMGHLIPVLELGKRLVI-QNNHHATIFVVAND 45 (493)
Q Consensus 3 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~~ 45 (493)
.+++||++...|+.+=+. ...|.+.|++ + |++|.++.++.-
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~-g~~V~vv~T~~A 58 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIP-GLEVAVVTTERA 58 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC----CEEEEEEECTGG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhccc-CCEEEEEECHhH
Confidence 345789999888887554 5899999999 9 999999998864
No 98
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=48.98 E-value=23 Score=31.01 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=31.8
Q ss_pred hHHHHHHHHhcCCCCcEEEECCcchh-------HHHHHHHcCCeEEEEe
Q 011099 95 IPALRSTISAMKYRPTALIVDLFGTE-------AMAVADEFEMLKYMFI 136 (493)
Q Consensus 95 ~~~l~~ll~~~~~~~DlVI~D~~~~~-------a~~~A~~lgIP~v~~~ 136 (493)
.+.+.++++++...||+|++|..... |..+...+++|+|.+.
T Consensus 90 ~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 90 GPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred hHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 34566667777668999999976655 4557788899999975
No 99
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=48.50 E-value=38 Score=31.36 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=36.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhh
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQL 51 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~ 51 (493)
-+++...|+.|--.-.+.+|...+.+ |..|.+++.+.....+..
T Consensus 70 l~li~G~pG~GKTtl~l~ia~~~a~~-g~~vl~~slE~s~~~l~~ 113 (315)
T 3bh0_A 70 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKKENIK 113 (315)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTT-TCEEEEEESSSCHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEECCCCHHHHHH
Confidence 46788889999999999999999988 899999998865544333
No 100
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=47.97 E-value=15 Score=34.29 Aligned_cols=35 Identities=9% Similarity=0.088 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
++|+|+|+..|. ......++|.++ ||+|..+.+..
T Consensus 6 ~~mrivf~Gt~~-----fa~~~L~~L~~~-~~~v~~Vvt~p 40 (318)
T 3q0i_A 6 QSLRIVFAGTPD-----FAARHLAALLSS-EHEIIAVYTQP 40 (318)
T ss_dssp -CCEEEEECCSH-----HHHHHHHHHHTS-SSEEEEEECCC
T ss_pred cCCEEEEEecCH-----HHHHHHHHHHHC-CCcEEEEEcCC
Confidence 479999998763 334556788888 89998776643
No 101
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=47.32 E-value=1.5e+02 Score=29.52 Aligned_cols=95 Identities=18% Similarity=0.121 Sum_probs=52.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhh---hhccCCCCCCCeEEEEcCCCCCCCCCCCCcc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQL---SKLVNSPDYDILDIVLLPCIDISGIVCTDAS 82 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~---~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (493)
.+|+++. +-.-.+.|++.|.+. |.+|+.+..........+ ..+...+.+.+.... .+.+
T Consensus 365 KrvaI~g-----d~~~~~~la~fL~el-Gm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~------------~~~D 426 (523)
T 3u7q_B 365 KRFALWG-----DPDFVMGLVKFLLEL-GCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVY------------IGKD 426 (523)
T ss_dssp CEEEEEC-----SHHHHHHHHHHHHHT-TCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEE------------ESCC
T ss_pred CEEEEEC-----CchHHHHHHHHHHHc-CCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEE------------ECCC
Confidence 5677763 334457788888888 999888876543222111 111111100000100 0011
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHc-------CCeEEEE
Q 011099 83 LVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEF-------EMLKYMF 135 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~l-------gIP~v~~ 135 (493)
...+.+++++. +||+||..... ..+|+++ |||++.+
T Consensus 427 ------------~~~l~~~i~~~--~pDLlig~s~~---k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 427 ------------LWHLRSLVFTD--KPDFMIGNSYG---KFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp ------------HHHHHHHHHHT--CCSEEEECTTH---HHHHHHHHHHCGGGCCCEEEC
T ss_pred ------------HHHHHHHHHhc--CCCEEEECccH---HHHHHHhhcccccCCCceEEe
Confidence 12455667666 99999998753 3355555 9998874
No 102
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=47.27 E-value=19 Score=30.30 Aligned_cols=42 Identities=7% Similarity=0.013 Sum_probs=34.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchh
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSE 49 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v 49 (493)
+||++...|+.|=+. ...+.+.|+++ |++|.++.++.-...+
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~-g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSK-FDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTT-CSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHC-CCEEEEEECcCHHHHh
Confidence 578888888877665 88999999999 9999999988644443
No 103
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=46.52 E-value=1.4e+02 Score=25.66 Aligned_cols=108 Identities=9% Similarity=-0.029 Sum_probs=57.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLV 84 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (493)
+||+++..+..+ .+.+|.+++.+.. +|+|..+.+.......... ... .++.+..++..... +-
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~-A~~----~gIp~~~~~~~~~~-------~r- 64 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLER-ARQ----AGIATHTLIASAFD-------SR- 64 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHH-HHH----TTCEEEECCGGGCS-------SH-
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHH-HHH----cCCcEEEeCccccc-------ch-
Confidence 468887766554 4667777777653 5888776665433322111 111 14555544321110 10
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc-hhHHHHHHHcCCeEEEEecc
Q 011099 85 TQIAVMMHESIPALRSTISAMKYRPTALIVDLFG-TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 85 ~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~-~~a~~~A~~lgIP~v~~~~~ 138 (493)
....+.+.+.++++ ++|+||+-.+. .-...+-+.....++=++++
T Consensus 65 -------~~~~~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 -------EAYDRELIHEIDMY--APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -------HHHHHHHHHHHGGG--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------hhccHHHHHHHHhc--CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 11223556777777 99999976543 22334445555566666543
No 104
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=46.51 E-value=14 Score=32.75 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=30.1
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEc
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVV 42 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 42 (493)
|...+|+|.|+..|..|- .||+.|+++ ||+|+.+..
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHHT-TCEEEECSS
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHHC-CCEEEEecC
Confidence 666789999999998884 689999999 999998655
No 105
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=46.49 E-value=22 Score=31.50 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=31.3
Q ss_pred HHHHHHHHhcCCCCcEEEECCcchh-------HHHHHHHcCCeEEEEe
Q 011099 96 PALRSTISAMKYRPTALIVDLFGTE-------AMAVADEFEMLKYMFI 136 (493)
Q Consensus 96 ~~l~~ll~~~~~~~DlVI~D~~~~~-------a~~~A~~lgIP~v~~~ 136 (493)
+.+.++++++..+||++++|..... |..+.-.+++|+|.+.
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 4556667777668999999965544 5568888999999975
No 106
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=46.01 E-value=22 Score=30.89 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=34.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCch
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSS 48 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 48 (493)
++||++...++.+-+. ...|.+.|+++ | +|.++.++.-..+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~A~~f 59 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKSSLHF 59 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTGGGGT
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcchHHHh
Confidence 4789999999988776 89999999999 9 9999998864333
No 107
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=44.57 E-value=1.6e+02 Score=29.41 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=54.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhh---hccCCCCCCCeEEEEcCCCCCCCCCCCCcc
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLS---KLVNSPDYDILDIVLLPCIDISGIVCTDAS 82 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~---~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (493)
.+|+++. +-.-.+.|++.|.+. |-+|+.+..........+. .+...+.+.+.... .+.
T Consensus 361 krv~i~g-----d~~~~~~la~~L~El-Gm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~------------~~~- 421 (519)
T 1qgu_B 361 KKFGLYG-----DPDFVMGLTRFLLEL-GCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVF------------INC- 421 (519)
T ss_dssp CEEEEES-----CHHHHHHHHHHHHHT-TCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEE------------ESC-
T ss_pred CEEEEEC-----CchHHHHHHHHHHHC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEE------------ECC-
Confidence 5677773 344567888888888 9999877766443221111 11111100011110 001
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHc-------CCeEEEE
Q 011099 83 LVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEF-------EMLKYMF 135 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~l-------gIP~v~~ 135 (493)
-...+.+++++. +||++|.+.. +..+|+++ |||++.+
T Consensus 422 -----------d~~~l~~~i~~~--~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 422 -----------DLWHFRSLMFTR--QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp -----------CHHHHHHHHHHH--CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred -----------CHHHHHHHHhhc--CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 112456666666 8999999874 46678888 9999764
No 108
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=44.47 E-value=1.6e+02 Score=25.95 Aligned_cols=37 Identities=0% Similarity=-0.030 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccCHH-HHHHHHHHHHhcCCceEEEEEcC
Q 011099 6 PHVALLASPGMGHLI-PVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~-P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
|||+++..-+.-++. .+...++.+..- |.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p-~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAP-GTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCT-TEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 678887777766664 455677777766 7888877754
No 109
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=44.44 E-value=23 Score=30.79 Aligned_cols=51 Identities=10% Similarity=-0.134 Sum_probs=41.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVN 56 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~ 56 (493)
+.+|++.+.++..|-....-++..|..+ |++|..+...-..+.+.....+.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~-G~~Vi~LG~~vp~e~iv~~~~~~ 142 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGAN-GFQIVDLGVDVLNENVVEEAAKH 142 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHT-SCEEEECCSSCCHHHHHHHHHHT
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHC-CCeEEEcCCCCCHHHHHHHHHHc
Confidence 5799999999999999999999999999 99999998765444444443333
No 110
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=44.26 E-value=18 Score=29.16 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
+.||+++.. |++- ..+++.|.++ ||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHT-TCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHC-CCCEEEEECC
Confidence 357888854 4333 7889999999 9999999864
No 111
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=44.00 E-value=93 Score=26.94 Aligned_cols=102 Identities=12% Similarity=0.115 Sum_probs=66.0
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++.+.++..+..++.+.+.. .-+|+.+.+..+.+-+-+ |++
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 114 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFM--------------------------RKLGKAFVSHYSGRMINI-----------HPS- 114 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCC--------------------------SCCCHHHHHHTTTSEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEccch--------------------------hhCCHHHHhhccCCeEEe-----------Ccc-
Confidence 467888888888888887543 457787777665433333 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|...+..|+.+|....++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 115 -LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~-Q~--~v~I~------~~dt~~~L~~rl~~~ 176 (215)
T 3tqr_A 115 -LLPKYTGLNTHERALAAGETEHGVSVHYVTEDLDAGPLIC-QA--RLSIT------PQDTPETLKTRVHAL 176 (215)
T ss_dssp -STTTTCSSCHHHHHHHTTCSEEEEEEEECC-CTTCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cCCCCCChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEE-EE--EEecC------CCCCHHHHHHHHHHH
Confidence 455567999999999999998887654 24444444332 22 22222 344778888777654
No 112
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=43.65 E-value=22 Score=29.38 Aligned_cols=43 Identities=21% Similarity=0.150 Sum_probs=32.9
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAND 45 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 45 (493)
|+++++-|++ ..+..--++|.+-||..-++. |++|+++.+..-
T Consensus 2 m~~~kl~II~-~sG~~dka~~a~ilA~~AaA~-G~eV~iFfTf~G 44 (160)
T 3pnx_A 2 MENKKMNLLL-FSGDYDKALASLIIANAAREM-EIEVTIFCAFWG 44 (160)
T ss_dssp CTTCEEEEEE-CCCCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG
T ss_pred CCCCcEEEEE-ecCCHHHHHHHHHHHHHHHHc-CCCEEEEEeehh
Confidence 5655444444 446667789999999999999 999999988753
No 113
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=43.64 E-value=76 Score=27.36 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=65.8
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++.+.++..+..++.+.+.. .-+|+.|.+..+.+-+-+ |++
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 117 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYM--------------------------RLLSGRFIAPYEGRILNI-----------HPS- 117 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCC--------------------------SCCCHHHHGGGTTCEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEeccc--------------------------cCcCHHHHhhccCCeEEE-----------CCc-
Confidence 467788888888888887543 457787777665433333 666
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|+..+..|+.+|....++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 118 -LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~-Q~--~v~I~------~~dt~~~L~~r~~~~ 179 (209)
T 4ds3_A 118 -LLPLFPGLHTHQRALDAGMKLAGCTVHLVTEGMDEGPILA-QA--AVPVL------DGDTAETLAARVLKA 179 (209)
T ss_dssp -CTTSSCSSCHHHHHHHTTCSEEEEEEEECCC--CCCCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cccCCCChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCeEE-EE--EEecC------CCCCHHHHHHHHHHH
Confidence 556677999999999999998877654 23344443332 21 22222 345778888777544
No 114
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=43.13 E-value=83 Score=28.68 Aligned_cols=103 Identities=13% Similarity=0.026 Sum_probs=67.2
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++++.++..+..++...+.. .-+|+.|.+..+.+-+-+ |++
T Consensus 155 ~~~~~~l~~~~~Dlivlagym--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 196 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYM--------------------------QILSDDLSAFLSGRCINI-----------HHS- 196 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCC--------------------------SCCCHHHHHHHTTSEEEE-----------ESS-
T ss_pred HHHHHHHHHhCCCEEEhhhhh--------------------------hhcCHHHHhhccCCeEEE-----------Ccc-
Confidence 467888888888888877543 457888887776543434 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccch--hcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHh
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLYA--EQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIV 439 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~~--DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl 439 (493)
+.=...|++.+..|+.+|+...++=.+. +..+-+.-+. +. -+.+. ..-|.++|.+.+.++-
T Consensus 197 -lLP~~rG~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~-Q~--~v~i~------~~dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 197 -FLPGFKGAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIA-QD--VEHVS------HRDSAEDLVRKGRDIE 259 (287)
T ss_dssp -CTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSSSCCCEEE-EE--EEECC------TTCCHHHHHHHHHHHH
T ss_pred -cccCCCCchHHHHHHHcCCCeEEEEEEEECCCCcCCCEEE-EE--EEecC------CCCCHHHHHHHHHHHH
Confidence 5555679999999999999998887642 3333333331 21 22222 3457788887776553
No 115
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=42.78 E-value=18 Score=29.63 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=28.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAND 45 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 45 (493)
.+++++.-+ .| +.|++++++.|.++ |.+|+++ ....
T Consensus 24 ~~~llIaGG-~G-ItPl~sm~~~l~~~-~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAY-TG-IVEVYPIAKAWQEI-GNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEET-TH-HHHHHHHHHHHHHH-TCEEEEE-EECB
T ss_pred CeEEEEEcc-Cc-HHHHHHHHHHHHhc-CCcEEEE-EeCC
Confidence 567777744 34 99999999999999 8999999 6543
No 116
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=42.66 E-value=1.2e+02 Score=28.66 Aligned_cols=33 Identities=15% Similarity=0.012 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
.++|+++..+.. .+.+++++++. |++|.++..+
T Consensus 7 ~~~ilI~g~g~~-----~~~~~~a~~~~-G~~~v~v~~~ 39 (403)
T 4dim_A 7 NKRLLILGAGRG-----QLGLYKAAKEL-GIHTIAGTMP 39 (403)
T ss_dssp CCEEEEECCCGG-----GHHHHHHHHHH-TCEEEEEECS
T ss_pred CCEEEEECCcHh-----HHHHHHHHHHC-CCEEEEEcCC
Confidence 468888876653 36689999999 9999999754
No 117
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=42.43 E-value=1e+02 Score=26.73 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=66.3
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++.+.++..+..++.+.+.. .-+|+.|.+..+.+-+-+ |++
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~--------------------------~IL~~~~l~~~~~~~iNi-----------HpS- 113 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFM--------------------------SILPEKFVTDWHHKIINI-----------HPS- 113 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCC--------------------------SCCCHHHHHHTTTSEEEE-----------ESS-
T ss_pred HHHHHHHHHhCCCEEEEeCCc--------------------------eEeCHHHHhhccCCeEEE-----------Ccc-
Confidence 567778888888888877543 457787777665433333 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|+..+..|+.+|+...++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 114 -LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~-Q~--~v~I~------~~dt~~~L~~rl~~~ 175 (215)
T 3kcq_A 114 -LLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIM-QA--AVPVL------REDTAESLASRILAA 175 (215)
T ss_dssp -CTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cccCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEE-EE--EeecC------CCCCHHHHHHHHHHH
Confidence 555567999999999999998887754 23344444332 22 22322 345778888777554
No 118
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=42.30 E-value=1.3e+02 Score=25.87 Aligned_cols=102 Identities=12% Similarity=0.068 Sum_probs=67.5
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++.+.++..+..++.+.+.. .-+|+.+.+..+.+.+-+ |++
T Consensus 72 ~~~~~~l~~~~~Dliv~a~y~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 113 (212)
T 3av3_A 72 SEILRELKGRQIDWIALAGYM--------------------------RLIGPTLLSAYEGKIVNI-----------HPS- 113 (212)
T ss_dssp HHHHHHHHHTTCCEEEESSCC--------------------------SCCCHHHHHHTTTCEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEchhh--------------------------hhCCHHHHhhhcCCEEEE-----------ecC-
Confidence 367788888888888877543 457888877666543434 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|+..+..|+.+|....++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 114 -LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~-Q~--~v~I~------~~dt~~~L~~r~~~~ 175 (212)
T 3av3_A 114 -LLPAFPGKDAIGQAYRAGVSETGVTVHYVDEGMDTGPVIA-QR--VVPIV------PGEPIEALEERIHQV 175 (212)
T ss_dssp -CTTSSCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cCCCCCCcCHHHHHHHcCCCeEEEEEEEECCCCCCCCEEE-EE--EEecC------CCCCHHHHHHHHHHH
Confidence 555667999999999999998887754 24444444432 22 22222 345788888877654
No 119
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=42.16 E-value=1e+02 Score=26.65 Aligned_cols=102 Identities=12% Similarity=0.115 Sum_probs=66.9
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++++.++..+..+|.+.+.. .-+|+.+.+..+.+.+-+ |++
T Consensus 71 ~~~~~~l~~~~~Dliv~agy~--------------------------~Il~~~~l~~~~~~~iNi-----------HpS- 112 (211)
T 3p9x_A 71 IEVVQQLKEKQIDFVVLAGYM--------------------------RLVGPTLLGAYEGRIVNI-----------HPS- 112 (211)
T ss_dssp HHHHHHHHHTTCCEEEESSCC--------------------------SCCCHHHHHHHTTSEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEeCch--------------------------hhcCHHHHhhccCCeEEE-----------CCc-
Confidence 467888888888888887543 557888877776543334 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|+..+..|+.+|....++=+. .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 113 -LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~-Q~--~v~I~------~~dt~~~L~~rl~~~ 174 (211)
T 3p9x_A 113 -LLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIA-QE--AVSIE------EEDTLETLTTKIQAV 174 (211)
T ss_dssp -CTTSSCSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cCCCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEE-EE--EEecC------CCCCHHHHHHHHHHH
Confidence 555566999999999999998887653 34444444432 22 22222 344778887777554
No 120
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=41.34 E-value=1.5e+02 Score=25.41 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=64.3
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++.+.++..+..++.+.+.. .-+|+.+.+..+.+.+-+ |++
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 110 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFM--------------------------RILSGPFVQKWNGKMLNI-----------HPS- 110 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCC--------------------------SCCCHHHHHHTTTSEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEcchh--------------------------hhCCHHHHhhhcCCEEEE-----------ccC-
Confidence 467788888888888888543 457777776665433333 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=-..|+..+..|+.+|....++=+. .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 111 -LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~-Q~--~v~I~------~~dt~~~L~~rl~~~ 172 (209)
T 1meo_A 111 -LLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIIL-QE--AVPVK------RGDTVATLSERVKLA 172 (209)
T ss_dssp -STTSSCSSCHHHHHHHHTCSEEEEEEEECCC---CCCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cCcCCCCccHHHHHHHcCCCcEEEEEEEECCCCcCCCEEE-EE--EEecC------CCCCHHHHHHHHHHH
Confidence 555567999999999999998877653 24444444332 21 22222 334777787776554
No 121
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=40.88 E-value=1.8e+02 Score=25.32 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=66.9
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++++.++..+..+|.+.+.. .-+|+.|.+..+.+.+-+ |++
T Consensus 91 ~~~~~~l~~~~~Dliv~agy~--------------------------~IL~~~~l~~~~~~~iNi-----------HpS- 132 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGYM--------------------------RLVRGPMLTAFPNRILNI-----------HPS- 132 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSCC--------------------------SCCCHHHHHHSTTCEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEcChh--------------------------HhCCHHHHhhccCCEEEE-----------ccC-
Confidence 467788888888888887543 457788877665433333 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|+..+..|+.+|....++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 133 -LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~-Q~--~v~I~------~~dt~~~L~~rl~~~ 194 (229)
T 3auf_A 133 -LLPAFPGLEAQRQALEHGVKVAGCTVHFVTAGVDEGPIIL-QA--AVPVL------EGDTVEDLRRRILAE 194 (229)
T ss_dssp -CTTSSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cCcCCCCcCHHHHHHHcCCCeEEEEEEEECCCCcCCCEEE-EE--EEecC------CCCCHHHHHHHHHHH
Confidence 445567999999999999998887753 34445554442 22 22322 345778888777554
No 122
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=40.69 E-value=1.8e+02 Score=25.13 Aligned_cols=103 Identities=11% Similarity=0.091 Sum_probs=67.8
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCC
Q 011099 288 TMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPS 367 (493)
Q Consensus 288 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~ 367 (493)
-.++.+.++..+..++.+.+.. .-+|+.|.+..+.+-+-+ |++
T Consensus 78 d~~~~~~l~~~~~Dlivlagy~--------------------------~iL~~~~l~~~~~~~iNi-----------HpS 120 (215)
T 3da8_A 78 DVAITAATAAHEPDLVVSAGFM--------------------------RILGPQFLSRFYGRTLNT-----------HPA 120 (215)
T ss_dssp HHHHHHHHHTTCCSEEEEEECC--------------------------SCCCHHHHHHHTTTEEEE-----------ESS
T ss_pred hHHHHHHHHhhCCCEEEEcCch--------------------------hhCCHHHHhhccCCeEEe-----------Ccc
Confidence 3467888999999988888543 457888877766543333 555
Q ss_pred cccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 368 VGGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 368 ~~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=..-|+..+..|+.+|....++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 121 --LLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~-Q~--~v~I~------~~dt~~~L~~rl~~~ 182 (215)
T 3da8_A 121 --LLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILA-QQ--PVPVL------DGDDEETLHERIKVT 182 (215)
T ss_dssp --CTTSSCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred --cccCCCCchHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEE-EE--EeecC------CCCCHHHHHHHHHHH
Confidence 455567999999999999998887754 23444444332 21 22222 345778888777654
No 123
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=39.90 E-value=1.4e+02 Score=24.95 Aligned_cols=43 Identities=14% Similarity=0.022 Sum_probs=28.4
Q ss_pred ccCCCh-hhhcCCCCcccccccCCchHHHH---HHHhCCceeecccc
Q 011099 354 PMWAPQ-PEILAHPSVGGFLTHCGWNSTME---SIVNGVPMIVWPLY 396 (493)
Q Consensus 354 ~~~~pq-~~lL~~~~~~~~i~HgG~gs~~e---al~~GvP~l~~P~~ 396 (493)
.+..+. ..++..-+.+.++--||.||..| ++.+++|++.+|.+
T Consensus 94 ~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 94 TGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred cCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344443 22333334446777899998655 57799999999983
No 124
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=39.63 E-value=1.4e+02 Score=25.94 Aligned_cols=36 Identities=11% Similarity=0.003 Sum_probs=30.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 8 VALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 8 vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
++++..++.|=-.-++.++..+..+ |..|.++.+..
T Consensus 15 ~litG~mGsGKTT~ll~~~~r~~~~-g~kVli~~~~~ 50 (223)
T 2b8t_A 15 EFITGPMFAGKTAELIRRLHRLEYA-DVKYLVFKPKI 50 (223)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred EEEECCCCCcHHHHHHHHHHHHHhc-CCEEEEEEecc
Confidence 3444555899999999999999999 99999998775
No 125
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=39.55 E-value=1.5e+02 Score=27.23 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=20.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCC--ceEEEEEc
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNN--HHATIFVV 42 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~G--h~Vt~~~~ 42 (493)
+.|+|+++ |+.|.+ -..|++.|.++ | ++|+.+..
T Consensus 23 ~~~~vlVt--GatG~i--G~~l~~~L~~~-g~~~~v~~~~~ 58 (346)
T 4egb_A 23 NAMNILVT--GGAGFI--GSNFVHYMLQS-YETYKIINFDA 58 (346)
T ss_dssp -CEEEEEE--TTTSHH--HHHHHHHHHHH-CTTEEEEEEEC
T ss_pred CCCeEEEE--CCccHH--HHHHHHHHHhh-CCCcEEEEEec
Confidence 34566655 444543 35788999999 8 55555443
No 126
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=39.07 E-value=1.3e+02 Score=27.58 Aligned_cols=105 Identities=12% Similarity=0.084 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCC
Q 011099 286 KQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAH 365 (493)
Q Consensus 286 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~ 365 (493)
+.-.++++.++..+..++...+.. .-+|+.|.+..+.+-+-+ |
T Consensus 168 ~~~~~~~~~l~~~~~DliVlagym--------------------------~IL~~~~l~~~~~~~INi-----------H 210 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLARYM--------------------------QILPPQLCREYAHQVINI-----------H 210 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCC--------------------------SCCCTTHHHHTTTCEEEE-----------E
T ss_pred HHHHHHHHHHHHhCCCEEEHhHhh--------------------------hhcCHHHHhhhhCCeEEe-----------C
Confidence 334568888888888888877543 456777777666543333 5
Q ss_pred CCcccccccCCchHHHHHHHhCCceeecccch--hcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 366 PSVGGFLTHCGWNSTMESIVNGVPMIVWPLYA--EQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 366 ~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~--DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
++ +.=...|++.+..|+.+|+...++=+.. +..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 211 pS--lLP~frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~-Q~--~v~I~------~~dt~~~L~~r~~~~ 274 (302)
T 3o1l_A 211 HS--FLPSFVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIE-QD--VVRVS------HRDSIENMVRFGRDV 274 (302)
T ss_dssp SS--CTTSSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred cc--cccCCCCccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEE-EE--EEecC------CCCCHHHHHHHHHHH
Confidence 55 5555679999999999999998887542 3333333331 21 22322 345788888877655
No 127
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=38.53 E-value=1.6e+02 Score=25.24 Aligned_cols=108 Identities=9% Similarity=0.048 Sum_probs=55.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCch-hhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSS-EQLSKLVNSPDYDILDIVLLPCIDISGIVCTDAS 82 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~-v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (493)
+++|+++..++-+. +.+|.+++.+.. .++|..+.+...... .+.+ .. .++.+..++..... +
T Consensus 7 ~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A--~~----~gIp~~~~~~~~~~-------~ 70 (209)
T 4ds3_A 7 RNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKA--EA----AGIATQVFKRKDFA-------S 70 (209)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHH--HH----TTCCEEECCGGGSS-------S
T ss_pred CccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHH--HH----cCCCEEEeCccccC-------C
Confidence 56888887766443 556666776541 378887776432111 1111 11 14454444321110 1
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc-hhHHHHHHHcCCeEEEEecc
Q 011099 83 LVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFG-TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~-~~a~~~A~~lgIP~v~~~~~ 138 (493)
. ....+.+.+.++++ ++|++|+-.+. .-...+-+...-.++=++++
T Consensus 71 -r-------~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 -K-------EAHEDAILAALDVL--KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -H-------HHHHHHHHHHHHHH--CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -H-------HHHHHHHHHHHHhc--CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 11224567778887 99999966443 22333444455555655543
No 128
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=38.35 E-value=2.1e+02 Score=25.21 Aligned_cols=41 Identities=7% Similarity=-0.099 Sum_probs=25.5
Q ss_pred CCCCCCEEEEEcCCCccCHH--HHHHHHHHHHhcCCceEEEEEc
Q 011099 1 MEIRKPHVALLASPGMGHLI--PVLELGKRLVIQNNHHATIFVV 42 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~--P~l~LA~~L~~r~Gh~Vt~~~~ 42 (493)
|+++..+|.++.......+. -.-.+-+++.++ |+++.++..
T Consensus 1 ~s~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~-g~~~~~~~~ 43 (291)
T 3l49_A 1 MSLEGKTIGITAIGTDHDWDLKAYQAQIAEIERL-GGTAIALDA 43 (291)
T ss_dssp -CCTTCEEEEEESCCSSHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCCCcEEEEEeCCCCChHHHHHHHHHHHHHHHc-CCEEEEEcC
Confidence 77777888877654333232 234566667777 888887653
No 129
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=38.01 E-value=1.5e+02 Score=25.48 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=66.1
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++.+.++..+..++.+.+.. .-+|+.+.+..+.+.+-+ |++
T Consensus 69 ~~~~~~l~~~~~Dliv~agy~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 110 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGFM--------------------------RILSPAFVSHYAGRLLNI-----------HPS- 110 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSCC--------------------------SCCCHHHHHHTTTSEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEeChh--------------------------hhCCHHHHhhccCCEEEE-----------ccC-
Confidence 467788888888888877543 457787777665433434 555
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|+..+..|+.+|....++=++ .+..+-+.-+. +.- +.+. ..-|.++|.+.+.++
T Consensus 111 -lLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~-Q~~--v~I~------~~dt~~~L~~rl~~~ 172 (212)
T 1jkx_A 111 -LLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVIL-QAK--VPVF------AGDSEDDITARVQTQ 172 (212)
T ss_dssp -CTTSCCSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEE-EEE--EECC------TTCCHHHHHHHHHHH
T ss_pred -cccCCCCccHHHHHHHcCCCceEEEEEEEcccccCCCEEE-EEE--EEcC------CCCCHHHHHHHHHHH
Confidence 445567999999999999998887754 24444444432 222 2222 345778887776554
No 130
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=37.84 E-value=1.9e+02 Score=24.74 Aligned_cols=108 Identities=7% Similarity=-0.029 Sum_probs=55.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLV 84 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (493)
++|+++..++.+ .+.++.++|.+.. +|+|..+.+......+... ... .++.+..++.... .+.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~-A~~----~gIp~~~~~~~~~-------~~~- 67 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIER-AAR----ENVPAFVFSPKDY-------PSK- 67 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHH-HHH----TTCCEEECCGGGS-------SSH-
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHH-HHH----cCCCEEEeCcccc-------cch-
Confidence 467777766543 3666777887652 4888777665322222211 111 1444443332111 010
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc-hhHHHHHHHcCCeEEEEecc
Q 011099 85 TQIAVMMHESIPALRSTISAMKYRPTALIVDLFG-TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 85 ~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~-~~a~~~A~~lgIP~v~~~~~ 138 (493)
....+.+.+.++++ +||++|+-.+. .-...+-+.....++=++++
T Consensus 68 -------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 -------AAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -------hhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 11223456677777 99999966432 22334445555566666544
No 131
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=37.73 E-value=29 Score=31.54 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
|||+++ |+.|-+ --.|++.|.++ ||+|+.++-.
T Consensus 1 MkILVT--GatGfI--G~~L~~~L~~~-G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFI--GTALTQLLNAR-GHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEE--CCCCHH--HHHHHHHHHHC-CCEEEEEECC
Confidence 677665 455544 35688999999 9999998754
No 132
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=37.54 E-value=2.4e+02 Score=26.51 Aligned_cols=41 Identities=10% Similarity=0.010 Sum_probs=34.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCch
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSS 48 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 48 (493)
-++++..++.|=-.=++.++..++.. |..|.|+.++.....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~-gg~VlyId~E~s~~~ 103 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKM-GGVAAFIDAEHALDP 103 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCCH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc-CCeEEEEecccccch
Confidence 35677778889999999999999998 899999998875444
No 133
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=37.39 E-value=90 Score=28.45 Aligned_cols=103 Identities=13% Similarity=0.052 Sum_probs=66.4
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++++.++..+..+|...+.. .-+|+.|.+..+.+-+-+ |++
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 197 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYM--------------------------QILSDEMSARLAGRCINI-----------HHS- 197 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCC--------------------------SCCCHHHHHHTTTSEEEE-----------EEE-
T ss_pred HHHHHHHHhcCCCEEEhhhhh--------------------------hhCCHHHHhhhcCCeEEe-----------Ccc-
Confidence 467888888888888877543 457888877766543333 444
Q ss_pred ccccccCCchHHHHHHHhCCceeecccch--hcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHh
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLYA--EQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIV 439 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~~--DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl 439 (493)
+.=...|++.+..|+.+|+...++=++. +..+-+.-+. +. -+.+. ..-|.++|.+.+.++-
T Consensus 198 -lLP~~rG~~p~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~-Q~--~v~i~------~~dt~~~L~~r~~~~e 260 (288)
T 3obi_A 198 -FLPGFKGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIID-QD--VERIS------HRDTPADLVRKGRDIE 260 (288)
T ss_dssp -CSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEE-EE--EEECC------TTCCHHHHHHHHHHHH
T ss_pred -cccCCCCchHHHHHHHcCCCEEEEEEEEECCCCcCCCeEE-EE--EEecC------CCCCHHHHHHHHHHHH
Confidence 4444679999999999999988877542 3333333331 21 22322 3457888887776553
No 134
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=37.00 E-value=1.5e+02 Score=25.60 Aligned_cols=103 Identities=9% Similarity=0.044 Sum_probs=54.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCC-CchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVAND-TSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDAS 82 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~-~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (493)
++||+++..++-+. +.+|.+++.+.. +++|..+.+... ....+.+ .. .++.+..++.... .
T Consensus 8 ~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A--~~----~gIp~~~~~~~~~--------~ 70 (215)
T 3kcq_A 8 ELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIA--QS----YGIPTFVVKRKPL--------D 70 (215)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHH--HH----TTCCEEECCBTTB--------C
T ss_pred CCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHH--HH----cCCCEEEeCcccC--------C
Confidence 56888887765433 555666665541 378887776432 2111111 11 1444444432111 0
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc-hhHHHHHHHcCCeEEEEecc
Q 011099 83 LVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFG-TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~-~~a~~~A~~lgIP~v~~~~~ 138 (493)
.+.+.+.++++ ++|+||.-.+. .-...+-+.....++=++++
T Consensus 71 ------------~~~~~~~L~~~--~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 71 ------------IEHISTVLREH--DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ------------HHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------------hHHHHHHHHHh--CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 14667777877 99999966443 22334445555556666543
No 135
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=36.93 E-value=31 Score=27.81 Aligned_cols=33 Identities=6% Similarity=0.108 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
.++|+++..+..| ..+++.|.++ |++|+++...
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~-g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSS-GHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhC-CCeEEEEECC
Confidence 4889998655444 5688999999 9999998764
No 136
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=36.57 E-value=33 Score=28.97 Aligned_cols=44 Identities=7% Similarity=0.053 Sum_probs=34.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhh
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLS 52 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~ 52 (493)
||++...|+.|=+ =...+.+.|+++ |++|.++.++.-...+...
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQH-FDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGGGGGTSCGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchhHHHHHHHH
Confidence 5888888887666 678999999999 9999999988654444333
No 137
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=36.40 E-value=26 Score=32.41 Aligned_cols=136 Identities=10% Similarity=-0.040 Sum_probs=73.9
Q ss_pred CCeEEEEEcCCC---CCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhh
Q 011099 269 HESVIYVSFGSG---GTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIR 345 (493)
Q Consensus 269 ~~~~v~vs~GS~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~ 345 (493)
+++.|.+..||. -..+.+.+.++++.|.+.+.++++..+.+.. ..+-+.+.+.
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e------------------------~~~~~~i~~~ 232 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHE------------------------EERAKRLAEG 232 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHH------------------------HHHHHHHHTT
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHH------------------------HHHHHHHHhh
Confidence 345777777775 2366778888888887667776654332110 1111111111
Q ss_pred hCCCceeeccCC---ChhhhcCCCCcccccccCCchHHHHHHHhCCceeec--ccchhcchhhHhhhhheeee-EEee-c
Q 011099 346 TRDVGLVVPMWA---PQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVW--PLYAEQKMNATMLTEELRVA-IRSK-E 418 (493)
Q Consensus 346 ~~~~~~~~~~~~---pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~--P~~~DQ~~na~~v~e~~Gvg-~~~~-~ 418 (493)
. +++.+.+-. .-..++.+++ ++|+.-. |.++=|.+.|+|+|++ |-... .++ -+|-. ..+. .
T Consensus 233 ~--~~~~l~g~~sl~el~ali~~a~--l~I~~DS-G~~HlAaa~g~P~v~lfg~t~p~--~~~-----P~~~~~~~~~~~ 300 (326)
T 2gt1_A 233 F--AYVEVLPKMSLEGVARVLAGAK--FVVSVDT-GLSHLTAALDRPNITVYGPTDPG--LIG-----GYGKNQMVCRAP 300 (326)
T ss_dssp C--TTEEECCCCCHHHHHHHHHTCS--EEEEESS-HHHHHHHHTTCCEEEEESSSCHH--HHC-----CCSSSEEEEECG
T ss_pred C--CcccccCCCCHHHHHHHHHhCC--EEEecCC-cHHHHHHHcCCCEEEEECCCChh--hcC-----CCCCCceEecCC
Confidence 1 122222222 2366888999 9998832 3444466799999998 32111 111 11100 1110 0
Q ss_pred cCCCCCccchHHHHHHHHHHhcc
Q 011099 419 VPSEKSVVERGEIEMMVRRIVAE 441 (493)
Q Consensus 419 ~~~~~~~~~~~~l~~ai~~vl~~ 441 (493)
..- -..++.+++.++++++|.+
T Consensus 301 ~~c-m~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 301 GNE-LSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp GGC-GGGCCHHHHHHHHHHTTTT
T ss_pred ccc-ccCCCHHHHHHHHHHHHHH
Confidence 000 1468999999999999965
No 138
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=35.81 E-value=28 Score=34.12 Aligned_cols=44 Identities=16% Similarity=0.238 Sum_probs=35.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-cCCceEEEEEcCCCCchhhh
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVI-QNNHHATIFVVANDTSSEQL 51 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~~~~~v~~ 51 (493)
-+++...|+.|=-.-.+.+|...+. . |..|.+++.+.....+..
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~-g~~vl~~slE~~~~~l~~ 246 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKE-GVGVGIYSLEMPAAQLTL 246 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTT-CCCEEEEESSSCHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhC-CCeEEEEECCCCHHHHHH
Confidence 4678888999999999999999875 6 789999999865544333
No 139
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=35.30 E-value=91 Score=28.39 Aligned_cols=103 Identities=12% Similarity=0.036 Sum_probs=66.1
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++++.++..+..++...+.. .-+|+.|.+..+.+-+-+ |++
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 197 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYM--------------------------QVLSPELCRRLDGWAINI-----------HHS- 197 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCC--------------------------SCCCHHHHHHTTTSEEEE-----------EEC-
T ss_pred HHHHHHHHhcCCCEEEecccc--------------------------cccCHHHHhhhcCCeEEe-----------ccc-
Confidence 467788888888888877543 457888877776543333 444
Q ss_pred ccccccCCchHHHHHHHhCCceeecccch--hcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHh
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLYA--EQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIV 439 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~~--DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl 439 (493)
+.=...|++.+..|+.+|+...++=++. +..+-+.-+. +. -+.+. ..-|.++|.+.+.++-
T Consensus 198 -lLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~-Q~--~~~i~------~~dt~~~L~~r~~~~e 260 (286)
T 3n0v_A 198 -LLPGFKGAKPYHQAYNKGVKMVGATAHYINNDLDEGPIIA-QG--VEVVD------HSHYPEDLIAKGRDIE 260 (286)
T ss_dssp -SSTTCCCSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEE-EE--EEECC------TTCCHHHHHHHHHHHH
T ss_pred -cccCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCceeE-EE--EEEcC------CCCCHHHHHHHHHHHH
Confidence 4445679999999999999998887642 3333333331 21 22222 3457788887776553
No 140
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=35.29 E-value=1.7e+02 Score=25.15 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=64.5
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++.+.++..+..++.+.+.. .-+|+.+.+..+.+.+-+ |++
T Consensus 70 ~~~~~~l~~~~~Dliv~a~y~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 111 (216)
T 2ywr_A 70 ERMALELKKKGVELVVLAGFM--------------------------RILSHNFLKYFPNKVINI-----------HPS- 111 (216)
T ss_dssp HHHHHHHHHTTCCEEEESSCC--------------------------SCCCHHHHTTSTTCEEEE-----------ESS-
T ss_pred HHHHHHHHhcCCCEEEEeCch--------------------------hhCCHHHHhhccCCeEEE-----------cCC-
Confidence 457788888888888877543 456777766555433333 455
Q ss_pred ccccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=..-|+..+..|+.+|....++=++ .+..+.+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 112 -LLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~-q~--~~~i~------~~dt~~~L~~rl~~~ 173 (216)
T 2ywr_A 112 -LIPAFQGLHAQKQAVEFGVKFSGCTVHIVDESVDAGPVIV-QA--VVPVL------PEDDENTLADRILKW 173 (216)
T ss_dssp -CTTTTCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cCcCCCCccHHHHHHHcCCCeEEEEEEEEcccCCCCCEEE-EE--EEEcC------CCCCHHHHHHHHHHH
Confidence 444557999999999999998877653 24444444442 22 22222 344777787766544
No 141
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=35.06 E-value=81 Score=28.81 Aligned_cols=102 Identities=13% Similarity=0.080 Sum_probs=65.9
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCc
Q 011099 289 MELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSV 368 (493)
Q Consensus 289 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~ 368 (493)
.++++.++..+..++...+.. .-+|+.|.+..+.+-+-+ |++
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~--------------------------~il~~~~l~~~~~~~iNi-----------HpS- 202 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYM--------------------------QVLSPEASARLANRAINI-----------HHS- 202 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCC--------------------------SCCCHHHHHHTTTSEEEE-----------EEE-
T ss_pred HHHHHHHHHhCCCEEEecCch--------------------------hhCCHHHHhhhcCCeEEe-----------CCC-
Confidence 467788888888888777543 457888877766543333 444
Q ss_pred ccccccCCchHHHHHHHhCCceeecccch--hcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 369 GGFLTHCGWNSTMESIVNGVPMIVWPLYA--EQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 369 ~~~i~HgG~gs~~eal~~GvP~l~~P~~~--DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=...|++.+..|+.+|+...++=++. +..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 203 -lLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~-Q~--~v~i~------~~dt~~~L~~r~~~~ 264 (292)
T 3lou_A 203 -FLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIE-QV--VERVD------HSYRPEQLLAVGRDV 264 (292)
T ss_dssp -CSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred -cCcCCCCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEE-EE--EEEcC------CCCCHHHHHHHHHHH
Confidence 4445679999999999999998887642 3333333331 21 22322 345778888877655
No 142
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=34.87 E-value=36 Score=31.57 Aligned_cols=34 Identities=9% Similarity=0.134 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
++|||+|+..|.. .....++|.+. ||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~-~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSS-GHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHT-TCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHC-CCcEEEEEeC
Confidence 4699999987643 24555777788 8999866654
No 143
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.84 E-value=26 Score=24.68 Aligned_cols=49 Identities=20% Similarity=0.241 Sum_probs=31.8
Q ss_pred hCCceeecccchhcchhhHhh--hhheeeeEEeeccCCCCCccchHHHHHHHHHHhc
Q 011099 386 NGVPMIVWPLYAEQKMNATML--TEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVA 440 (493)
Q Consensus 386 ~GvP~l~~P~~~DQ~~na~~v--~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~ 440 (493)
.|+|++++--.+.|.+.-..- ++.-|+...+- ..-++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvl------kstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL------KSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE------ECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhh------ccCCHHHHHHHHHHHHH
Confidence 588888887766665433221 12336665553 44588999999999885
No 144
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=34.61 E-value=25 Score=33.36 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=29.4
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
|...+|+|.|+-.|..| ..+|..|++. ||+|++....
T Consensus 25 m~~~~mkI~VIGaG~mG-----~alA~~La~~-G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWG-----TALALVLARK-GQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECCSHHH-----HHHHHHHHTT-TCCEEEECSC
T ss_pred ccccCCeEEEECccHHH-----HHHHHHHHHC-CCeEEEEeCC
Confidence 45556899999988776 4689999999 9999998764
No 145
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=34.60 E-value=1.7e+02 Score=28.50 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEE
Q 011099 97 ALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMF 135 (493)
Q Consensus 97 ~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~ 135 (493)
.+.+++++. +||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~--~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNE--GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHS--CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc--CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 356777776 9999998874 467899999999875
No 146
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=34.27 E-value=2e+02 Score=24.63 Aligned_cols=127 Identities=9% Similarity=0.013 Sum_probs=66.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHH-HHhcCCceEEEEEcCCCCchhhhhhccCCC------CCCCeEEEEcCCCCCCCCCC
Q 011099 6 PHVALLASPGMGHLIPVLELGKR-LVIQNNHHATIFVVANDTSSEQLSKLVNSP------DYDILDIVLLPCIDISGIVC 78 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~-L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~------~~~~i~~~~l~~~~~~~~~~ 78 (493)
--+++...|+.|=-.-.+.+|.. +.+. |..|.+++.+...+.+......... ....+.+.+........ .
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~-~~~v~~~s~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~ 107 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEY-GEPGVFVTLEERARDLRREMASFGWDFEKYEKEGKIAIVDGVSSVVGL--P 107 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHH-CCCEEEEESSSCHHHHHHHHHTTTCCHHHHHHTTSEEEEC-----------
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhc-CCCceeecccCCHHHHHHHHHHcCCChHHHHhcCcchhhhhHHHHhhc--c
Confidence 34678888999999999998765 4566 7889999988765554433222110 00123322211100000 0
Q ss_pred CCcchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchh----------------HHHHHHHcCCeEEEEec
Q 011099 79 TDASLVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTE----------------AMAVADEFEMLKYMFIA 137 (493)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~----------------a~~~A~~lgIP~v~~~~ 137 (493)
...................+...++.. ++++||.|..... -..+|+++|+|.+.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vviD~~~~l~~~~~~~~~~~~~~~~L~~~a~~~~i~vi~~~q 180 (251)
T 2zts_A 108 SEEKFVLEDRFNVDNFLRYIYRVVKAI--NAKRLVIDSIPSIALRLEEERKIREVLLKLNTILLEMGVTTILTTE 180 (251)
T ss_dssp ----------CCHHHHHHHHHHHHHHT--TCSEEEEECHHHHHHHSSSGGGHHHHHHHHHHHHHHHCCEEEEEEC
T ss_pred cchhccccccccHHHHHHHHHHHHHhc--CCcEEEEEcHHHHhhhccChHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 000000000000111223445555555 8999999975432 12478899999888764
No 147
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=34.02 E-value=1e+02 Score=28.62 Aligned_cols=82 Identities=10% Similarity=0.085 Sum_probs=0.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEc--------CCCCchhhhhhccCCCCCCCeEEEEcCCCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVV--------ANDTSSEQLSKLVNSPDYDILDIVLLPCID 72 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~--------~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~ 72 (493)
|.+ |||+|+ |--+-...+.++|.+. ||+|..+.+ ........+. ++.+.......
T Consensus 20 ~~~--mrIvf~-----G~~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~~~~~v~~~A~~~---------gIpv~~~~~~~ 82 (329)
T 2bw0_A 20 FQS--MKIAVI-----GQSLFGQEVYCHLRKE-GHEVVGVFTVPDKDGKADPLGLEAEKD---------GVPVFKYSRWR 82 (329)
T ss_dssp -CC--CEEEEE-----CCHHHHHHHHHHHHHT-TCEEEEEEECCCCSSCCCHHHHHHHHH---------TCCEEECSCCE
T ss_pred CCC--CEEEEE-----cCcHHHHHHHHHHHHC-CCeEEEEEeCCCcCCCCCHHHHHHHHc---------CCCEEecCccc
Q ss_pred CCCCCCCCcchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc
Q 011099 73 ISGIVCTDASLVTQIAVMMHESIPALRSTISAMKYRPTALIVDLFG 118 (493)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~ 118 (493)
.... ..+.+.+.++++ ++|++|+-.+.
T Consensus 83 ~~~~-----------------~~~~~~~~l~~~--~~Dliv~a~y~ 109 (329)
T 2bw0_A 83 AKGQ-----------------ALPDVVAKYQAL--GAELNVLPFCS 109 (329)
T ss_dssp ETTE-----------------ECHHHHHHHHTT--CCSEEEESSCS
T ss_pred cccc-----------------ccHHHHHHHHhc--CCCEEEEeehh
No 148
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=33.68 E-value=37 Score=26.37 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
.|+|+++-. |.+ -..+++.|.++ ||+|+++...
T Consensus 4 ~m~i~IiG~---G~i--G~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRV--GYTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHH--HHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHhC-CCeEEEEECC
Confidence 578988854 544 34688999999 9999998754
No 149
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=33.50 E-value=32 Score=31.99 Aligned_cols=34 Identities=9% Similarity=0.175 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+|||+|+..|..+ ....++|.+. ||+|..+.+..
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~-~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDS-SHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHS-SSEEEEEECCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHC-CCeEEEEEeCC
Confidence 4789999888655 3456788888 89998777643
No 150
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=33.03 E-value=57 Score=34.25 Aligned_cols=115 Identities=8% Similarity=0.036 Sum_probs=71.2
Q ss_pred eeccCCChhhhcCCCCcccccccCCchHHHHHHHhCCceeecccchhcchhhHhhhhheeeeEEeeccC---CCCCccch
Q 011099 352 VVPMWAPQPEILAHPSVGGFLTHCGWNSTMESIVNGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVP---SEKSVVER 428 (493)
Q Consensus 352 ~~~~~~pq~~lL~~~~~~~~i~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~---~~~~~~~~ 428 (493)
-+..+.+-.++|..++ +.||=-- ..+.|.+..++|+|......|++..- ..|. ..+ +. .+.-.-|.
T Consensus 602 ~~~~~~di~~ll~~aD--~lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~--y~d-~~~~~pg~~~~~~ 670 (729)
T 3l7i_A 602 DVSNYNDVSELFLISD--CLITDYS-SVMFDYGILKRPQFFFAYDIDKYDKG-----LRGF--YMN-YMEDLPGPIYTEP 670 (729)
T ss_dssp ECTTCSCHHHHHHTCS--EEEESSC-THHHHHGGGCCCEEEECTTTTTTTSS-----CCSB--SSC-TTSSSSSCEESSH
T ss_pred eCCCCcCHHHHHHHhC--EEEeech-HHHHhHHhhCCCEEEecCCHHHHhhc-----cCCc--ccC-hhHhCCCCeECCH
Confidence 3445667788999999 9999754 78899999999999987766654331 1121 111 10 00123467
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 011099 429 GEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECE 480 (493)
Q Consensus 429 ~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 480 (493)
++|.++|.....+. ..++++.+++.+..-.. .+|.++++.++.+++...
T Consensus 671 ~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 671 YGLAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 89999998776532 23777777777765442 345555455555554443
No 151
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=33.02 E-value=1.6e+02 Score=25.43 Aligned_cols=106 Identities=12% Similarity=0.031 Sum_probs=52.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-cCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcch
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVI-QNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASL 83 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (493)
++||+++..++-+.+..+ .+++.+ . +++|..+.+.......+.+ .. .++.+...+.... .+-
T Consensus 12 ~~ri~vl~SG~gsnl~al---l~~~~~~~-~~eI~~Vis~~~a~~~~~A--~~----~gIp~~~~~~~~~-------~~r 74 (215)
T 3da8_A 12 PARLVVLASGTGSLLRSL---LDAAVGDY-PARVVAVGVDRECRAAEIA--AE----ASVPVFTVRLADH-------PSR 74 (215)
T ss_dssp SEEEEEEESSCCHHHHHH---HHHSSTTC-SEEEEEEEESSCCHHHHHH--HH----TTCCEEECCGGGS-------SSH
T ss_pred CcEEEEEEeCChHHHHHH---HHHHhccC-CCeEEEEEeCCchHHHHHH--HH----cCCCEEEeCcccc-------cch
Confidence 578999987775544444 444432 3 5788877766543221121 11 1344443321110 010
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCc-chhHHHHHHHcCCeEEEEec
Q 011099 84 VTQIAVMMHESIPALRSTISAMKYRPTALIVDLF-GTEAMAVADEFEMLKYMFIA 137 (493)
Q Consensus 84 ~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~-~~~a~~~A~~lgIP~v~~~~ 137 (493)
....+.+.+.++++ ++|++|.-.+ -.-...+-+.....++=+++
T Consensus 75 --------~~~d~~~~~~l~~~--~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 75 --------DAWDVAITAATAAH--EPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp --------HHHHHHHHHHHHTT--CCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred --------hhhhHHHHHHHHhh--CCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 11234566777777 9999996433 22223333444444555553
No 152
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=32.92 E-value=59 Score=25.64 Aligned_cols=29 Identities=7% Similarity=0.098 Sum_probs=24.5
Q ss_pred CccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 15 GMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 15 ~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+.......+.+|....+. ||+|+++-..+
T Consensus 28 ~~~~~~~al~lA~~A~a~-g~eV~vFf~~d 56 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASM-EYETSVFFMIX 56 (134)
T ss_dssp GTHHHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHHHC-CCCEEEEEEeC
Confidence 456778889999999999 99999988775
No 153
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=32.50 E-value=55 Score=28.73 Aligned_cols=39 Identities=26% Similarity=0.287 Sum_probs=35.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+++|++..-|+.|--.-++.+|..|+++ |++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 5789999999999999999999999999 99998887765
No 154
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=32.18 E-value=59 Score=27.55 Aligned_cols=42 Identities=14% Similarity=0.111 Sum_probs=33.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchh
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSE 49 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v 49 (493)
+||++...|+.|-+ =...+.+.|+++ |++|.++.++.-...+
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A~~~i 43 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEEL-DFSVDLVISRNAKVVL 43 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHT-TCEEEEEECHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEChhHHHHh
Confidence 37999888988855 579999999999 9999999988643333
No 155
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=31.66 E-value=2.4e+02 Score=24.06 Aligned_cols=108 Identities=12% Similarity=-0.018 Sum_probs=54.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQN-NHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLV 84 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (493)
++|+++..+.-+.+.. |.+++++.. +|+|..+.+......... .... .++.+..++.... .+.
T Consensus 1 ~riaVl~SG~Gs~L~a---Li~~~~~~~~~~~I~~Vvs~~~~~~~~~-~A~~----~gIp~~~~~~~~~-------~~r- 64 (209)
T 1meo_A 1 ARVAVLISGTGSNLQA---LIDSTREPNSSAQIDIVISNKAAVAGLD-KAER----AGIPTRVINHKLY-------KNR- 64 (209)
T ss_dssp CEEEEEESSSCTTHHH---HHHHHHSTTCSCEEEEEEESSTTCHHHH-HHHH----TTCCEEECCGGGS-------SSH-
T ss_pred CeEEEEEECCchHHHH---HHHHHhcCCCCcEEEEEEeCCCChHHHH-HHHH----cCCCEEEECcccc-------Cch-
Confidence 4688888776655544 445555432 689887776543332211 1111 1444443332111 010
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcc-hhHHHHHHHcCCeEEEEecc
Q 011099 85 TQIAVMMHESIPALRSTISAMKYRPTALIVDLFG-TEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 85 ~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~-~~a~~~A~~lgIP~v~~~~~ 138 (493)
....+.+.+.++++ ++|+||+-.+. .-...+-+.....++-++++
T Consensus 65 -------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 65 -------VEFDSAIDLVLEEF--SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp -------HHHHHHHHHHHHHT--TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------hhhhHHHHHHHHhc--CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 11123456777777 99999965432 22333445555566666543
No 156
>2llh_A Nucleophosmin; nucleolar, chaperone, oncoprotein, DNA binding protein; NMR {Homo sapiens} PDB: 2vxd_A
Probab=37.73 E-value=10 Score=26.44 Aligned_cols=41 Identities=27% Similarity=0.387 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhcchhhhhhh
Q 011099 450 RVEELKHSAQKALINGGSSYNSLSKIAHECENSLQFTQEKA 490 (493)
Q Consensus 450 ~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (493)
..+.+++.+++++..||+--..-.+|++.+++.-+++.|++
T Consensus 23 svedIKaKmqasieKg~slPKvE~KF~NyvKn~F~mtdqe~ 63 (74)
T 2llh_A 23 SVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEA 63 (74)
Confidence 36677788888888888776666689999999888887776
No 157
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.30 E-value=46 Score=32.76 Aligned_cols=86 Identities=21% Similarity=0.206 Sum_probs=52.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcchHH
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASLVT 85 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (493)
.+|+++. +-.-.+.|++.|.+. |.+|+.+.+...... +...+ .... .. .+.
T Consensus 314 krv~i~~-----~~~~~~~l~~~L~el-Gm~vv~~~~~~~~~~-----~~~~~--------------~~~v-~~-~D~-- 364 (458)
T 3pdi_B 314 ARTAIAA-----DPDLLLGFDALLRSM-GAHTVAAVVPARAAA-----LVDSP--------------LPSV-RV-GDL-- 364 (458)
T ss_dssp CEEEEEC-----CHHHHHHHHHHHHTT-TCEEEEEEESSCCSC-----CTTTT--------------SSCE-EE-SHH--
T ss_pred CEEEEEC-----CcHHHHHHHHHHHHC-CCEEEEEEECCCChh-----hhhCc--------------cCcE-Ee-CCH--
Confidence 5677753 234456788888888 899888877642111 00000 0000 00 011
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchhHHHHHHHcCCeEEEE
Q 011099 86 QIAVMMHESIPALRSTISAMKYRPTALIVDLFGTEAMAVADEFEMLKYMF 135 (493)
Q Consensus 86 ~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~ 135 (493)
..+++++++. +||++|.... ...+|+++|||++.+
T Consensus 365 ----------~~le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 365 ----------EDLEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp ----------HHHHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred ----------HHHHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 1356777777 9999999875 567899999998874
No 158
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=31.13 E-value=63 Score=27.61 Aligned_cols=40 Identities=10% Similarity=0.004 Sum_probs=32.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDT 46 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~ 46 (493)
|||++-..|+.|-+. ...|.+.|+++.|++|.++.++.-.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~ 40 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAK 40 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHH
Confidence 578888888877766 8999999987636999999988543
No 159
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=31.04 E-value=49 Score=30.74 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=0.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCc
Q 011099 2 EIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDA 81 (493)
Q Consensus 2 ~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 81 (493)
+++.|||+|+..|..+- ...++|.+. ||+|..+.+......-....+...|....-.-..+|.......
T Consensus 1 ~~~mmrIvf~Gtp~fa~-----~~L~~L~~~-~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~----- 69 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFSV-----PVLRRLIED-GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRI----- 69 (317)
T ss_dssp CCTTSEEEEECCSTTHH-----HHHHHHHHT-TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCT-----
T ss_pred CCCceEEEEEeCCHHHH-----HHHHHHHHC-CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccC-----
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCc-chhHHHHHHHcCCeEEEEecc
Q 011099 82 SLVTQIAVMMHESIPALRSTISAMKYRPTALIVDLF-GTEAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~-~~~a~~~A~~lgIP~v~~~~~ 138 (493)
..+...+.++++ ++|++|+-.+ ..-...+-+.....++-++++
T Consensus 70 ------------~~~~~~~~l~~~--~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpS 113 (317)
T 3rfo_A 70 ------------REKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHAS 113 (317)
T ss_dssp ------------TSHHHHHHHHHH--CCSEEEESSCCSCCCHHHHHSSTTCEEEEESS
T ss_pred ------------CCHHHHHHHHhc--CCCEEEEcCchhhCCHHHHhhCcCCEEEECCc
No 160
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=30.26 E-value=41 Score=28.12 Aligned_cols=42 Identities=7% Similarity=-0.043 Sum_probs=29.7
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|.+++..|+++...++=.+- ++.-.+.|++. |++|+++++..
T Consensus 4 m~~t~~~v~il~~~gFe~~E-~~~p~~~l~~a-g~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDEE-YFESKKIFESA-GYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHHH-HHHHHHHHHHT-TCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHHH-HHHHHHHHHHC-CCEEEEEECCC
Confidence 77776666666655544433 56677888999 99999999764
No 161
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=30.26 E-value=2.3e+02 Score=26.65 Aligned_cols=41 Identities=5% Similarity=0.003 Sum_probs=35.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCch
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSS 48 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 48 (493)
-++++..|+.|--.-.+.++..++.+ |..|.|++.+...+.
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~-g~~vlyi~~E~s~~~ 116 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKA-GGTCAFIDAEHALDP 116 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCCH
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHC-CCeEEEEECCCChhH
Confidence 46777888999999999999999999 899999999875544
No 162
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=30.01 E-value=26 Score=34.98 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|+|||++-.+..| +.+|+.|.+. |++||++...+
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~-~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTK-KYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTT-TCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhC-CCcEEEECCCC
Confidence 6899999866544 6789999988 99999998765
No 163
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=29.97 E-value=1.4e+02 Score=25.72 Aligned_cols=109 Identities=11% Similarity=0.010 Sum_probs=56.7
Q ss_pred EEEEcCCCccCHHH----HHHHHHHHHhcCCceEEEEEcCCCCchhhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCcch
Q 011099 8 VALLASPGMGHLIP----VLELGKRLVIQNNHHATIFVVANDTSSEQLSKLVNSPDYDILDIVLLPCIDISGIVCTDASL 83 (493)
Q Consensus 8 vl~~~~p~~GHv~P----~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (493)
|+++.=--.|.++| ++.-|+.|++..|-+|+.++-....+.+.+..... .. +.+ ..+....... ...
T Consensus 6 ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~-Ga-d~v--~~v~~~~~~~-----~~~ 76 (217)
T 3ih5_A 6 LFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPY-GV-DKL--HVFDAEGLYP-----YTS 76 (217)
T ss_dssp EEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGG-TC-SEE--EEEECGGGSS-----CCH
T ss_pred EEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhc-CC-CEE--EEecCccccc-----CCH
Confidence 66665444465544 57778888752266666655433222222322221 10 111 1222111111 111
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEECCcchh---HHHHHHHcCCeEEEE
Q 011099 84 VTQIAVMMHESIPALRSTISAMKYRPTALIVDLFGTE---AMAVADEFEMLKYMF 135 (493)
Q Consensus 84 ~~~~~~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~---a~~~A~~lgIP~v~~ 135 (493)
......+.+++++. +||+|++-..... +..+|.+||+|.+.-
T Consensus 77 --------~~~a~~l~~~i~~~--~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 77 --------LPHTSILVNLFKEE--QPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp --------HHHHHHHHHHHHHH--CCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred --------HHHHHHHHHHHHhc--CCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 12334556667766 8999997764443 456999999997764
No 164
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=29.96 E-value=1.2e+02 Score=20.95 Aligned_cols=53 Identities=6% Similarity=0.124 Sum_probs=31.7
Q ss_pred CccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHh-hcCCChH-HHHHHHHHH
Q 011099 424 SVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKAL-INGGSSY-NSLSKIAHE 478 (493)
Q Consensus 424 ~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~-~~~g~~~-~~~~~~~~~ 478 (493)
...|.++|.++|+++|.+.+.+++. .+++++.+++.. .-+=+.. ..|+..|+.
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT--~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~ 64 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVT--MKQICKKVYENYPTYDLTERKDFIKTTVKE 64 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCC--HHHHHHHHHHHCSSSCCSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHh--HHHHHHHHHHHccCCCChHHHHHHHHHHHH
Confidence 4568899999999999875433332 355666666654 3333322 244444444
No 165
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=29.74 E-value=51 Score=30.62 Aligned_cols=35 Identities=9% Similarity=-0.042 Sum_probs=29.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
..+||.|+-.+..| +-.+|+.|.++ ||+|+..=..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~-G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEA-GFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHT-TCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhC-CCEEEEEcCC
Confidence 45789999999888 44699999999 9999987554
No 166
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.57 E-value=34 Score=32.54 Aligned_cols=29 Identities=24% Similarity=0.267 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEE
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIF 40 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~ 40 (493)
|||+|+-.+-.| +.+|..|+++ ||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhC-CCCEEEE
Confidence 789999877444 8899999999 9999997
No 167
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=29.48 E-value=1.9e+02 Score=30.69 Aligned_cols=44 Identities=7% Similarity=0.181 Sum_probs=33.8
Q ss_pred CccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCC
Q 011099 424 SVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGS 467 (493)
Q Consensus 424 ~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~ 467 (493)
..++++.|.+++.+++....+..+++..+....+.++.+.+.|.
T Consensus 770 ~gld~~~Iv~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 770 NDMDRYALQAAALKLIDADKYADKIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp TTCSHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCcCHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 55788999999999987555666777777777777777777665
No 168
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.47 E-value=1.1e+02 Score=24.06 Aligned_cols=49 Identities=12% Similarity=-0.008 Sum_probs=32.2
Q ss_pred hCCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhccc
Q 011099 386 NGVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAEK 442 (493)
Q Consensus 386 ~GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 442 (493)
..+|+|++--..|.. ..... -..|+--.+. ..++.++|..+|+.++...
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~-~~~g~~~~l~------kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQA-IQDGAYDFIA------KPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHH-HHTTCCEEEE------SSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHH-HhcCCCeEEe------CCCCHHHHHHHHHHHHHHH
Confidence 478888875444433 33333 3567655654 5578999999999998643
No 169
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=29.27 E-value=34 Score=30.03 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=29.9
Q ss_pred HHHHHHHHhc-CCCCcEEEECCcchhHHHHHHHcCCeEEEEec
Q 011099 96 PALRSTISAM-KYRPTALIVDLFGTEAMAVADEFEMLKYMFIA 137 (493)
Q Consensus 96 ~~l~~ll~~~-~~~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~ 137 (493)
+.+.+.++++ ..++|+||.|.. +..+|+++|+|.+.+.+
T Consensus 141 ee~~~~i~~l~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 3455555555 459999999874 57899999999999874
No 170
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=28.35 E-value=41 Score=30.96 Aligned_cols=33 Identities=12% Similarity=0.238 Sum_probs=27.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|+|+++-.|+.|- .+|..|++. ||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHT-SCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHC-CCeEEEEEcCc
Confidence 4699999888884 568899999 99999998764
No 171
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=28.19 E-value=69 Score=31.35 Aligned_cols=44 Identities=16% Similarity=0.287 Sum_probs=35.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHh-cCCceEEEEEcCCCCchhh
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVI-QNNHHATIFVVANDTSSEQ 50 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~~~~~v~ 50 (493)
--+++...|+.|=-.-++.++..+.. . |..|.|++.+.....+.
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~-g~~Vl~~s~E~s~~~l~ 248 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKT-NENVAIFSLEMSAQQLV 248 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHS-SCCEEEEESSSCHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhC-CCcEEEEECCCCHHHHH
Confidence 35788888999999999999999875 6 88999999886544433
No 172
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=27.60 E-value=46 Score=31.69 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=28.5
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEc
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVV 42 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 42 (493)
|.+.+.+|+++-.+-. -+.+|..|+++ |++|+++-.
T Consensus 1 M~~~~~~V~IVGaG~a-----Gl~~A~~L~~~-G~~v~v~E~ 36 (397)
T 2vou_A 1 MSPTTDRIAVVGGSIS-----GLTAALMLRDA-GVDVDVYER 36 (397)
T ss_dssp -CCCCSEEEEECCSHH-----HHHHHHHHHHT-TCEEEEECS
T ss_pred CCCCCCcEEEECCCHH-----HHHHHHHHHhC-CCCEEEEec
Confidence 7767789999986633 48889999999 999999853
No 173
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=27.31 E-value=1e+02 Score=23.05 Aligned_cols=49 Identities=8% Similarity=0.211 Sum_probs=28.7
Q ss_pred cchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhcCCCh---HHHHHHHHHHHHh
Q 011099 426 VERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALINGGSS---YNSLSKIAHECEN 481 (493)
Q Consensus 426 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~---~~~~~~~~~~~~~ 481 (493)
++++++.+...++- . .+.+++-|.+++.+. ..|+.. ...+.+|.+.++.
T Consensus 3 ~~~eq~~k~~~el~---~---v~~n~~lL~EML~~~-~p~~~~~~~~el~~eL~~~c~~ 54 (103)
T 1wrd_A 3 LGSEQIGKLRSELE---M---VSGNVRVMSEMLTEL-VPTQAEPADLELLQELNRTCRA 54 (103)
T ss_dssp SSSTTHHHHHHHHH---H---HHHHHHHHHHHHHHS-CTTTCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH---H---HHHHHHHHHHHHHhc-CCCCCCcccHHHHHHHHHHHHH
Confidence 46677776665553 3 788888888887774 233221 1244455555554
No 174
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=27.08 E-value=1.3e+02 Score=22.54 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=28.7
Q ss_pred EEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 011099 272 VIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPP 309 (493)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 309 (493)
-|||-|.| +++.+.++..-++..|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777776 78999999999999999998888544
No 175
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=27.04 E-value=53 Score=27.99 Aligned_cols=40 Identities=0% Similarity=-0.099 Sum_probs=33.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDT 46 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~ 46 (493)
++||++...|+.|=+. ...|.+.|+++ |++|.++.++.-.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~-g~~V~vv~T~~A~ 47 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSF-FKEIRVVMTKTAE 47 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTT-SSEEEEEECHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEEchhHH
Confidence 4689888888877775 78999999999 9999999987543
No 176
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=26.96 E-value=2.7e+02 Score=22.99 Aligned_cols=147 Identities=12% Similarity=0.106 Sum_probs=75.1
Q ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCC
Q 011099 270 ESVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDV 349 (493)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 349 (493)
+|.|-|-+||.+ +.+..++....|+.++.++-..+-.. ...|+.+.+-.
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------------------------HR~p~~l~~~~--- 59 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------------------------HRTPDYMFEYA--- 59 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------------------------TTSHHHHHHHH---
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------------------------cCCHHHHHHHH---
Confidence 345666677743 45667788899999998864444211 33455432211
Q ss_pred ceeeccCCChhhhcCCCCcccccccCCch----HHHHHHHhCCceeecccchh-cchhhHhhh-hh--eeeeEEeeccCC
Q 011099 350 GLVVPMWAPQPEILAHPSVGGFLTHCGWN----STMESIVNGVPMIVWPLYAE-QKMNATMLT-EE--LRVAIRSKEVPS 421 (493)
Q Consensus 350 ~~~~~~~~pq~~lL~~~~~~~~i~HgG~g----s~~eal~~GvP~l~~P~~~D-Q~~na~~v~-e~--~Gvg~~~~~~~~ 421 (493)
.+.+ -...+ +||.=.|.- ++..++ .-+|.|.+|.... -......+. -+ .|+.+..-.+++
T Consensus 60 --------~~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~ 127 (170)
T 1xmp_A 60 --------ETAR-ERGLK--VIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGK 127 (170)
T ss_dssp --------HHTT-TTTCC--EEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSH
T ss_pred --------HHHH-hCCCc--EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCC
Confidence 1000 00122 555544433 333333 3689999998542 111111110 13 455432210210
Q ss_pred CCCccchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhc
Q 011099 422 EKSVVERGEIEMMVRRIVAEKQGHAIRNRVEELKHSAQKALIN 464 (493)
Q Consensus 422 ~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~ 464 (493)
.+..++.-++..|. -+.|+. ++++.+.+++..++.+.+
T Consensus 128 -a~~~nAallAaqIl-a~~d~~---l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 128 -AGSTNAGLLAAQIL-GSFHDD---IHDALELRREAIEKDVRE 165 (170)
T ss_dssp -HHHHHHHHHHHHHH-HTTCHH---HHHHHHHHHHHHHHHHHC
T ss_pred -cchHHHHHHHHHHH-ccCCHH---HHHHHHHHHHHHHHHHHh
Confidence 13456666666664 335555 888888888887665444
No 177
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=26.81 E-value=94 Score=27.88 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=30.6
Q ss_pred HHHHHHHHhcCCCCcEEEECCcch------hHHHHHHHcCCeEEEEecc
Q 011099 96 PALRSTISAMKYRPTALIVDLFGT------EAMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 96 ~~l~~ll~~~~~~~DlVI~D~~~~------~a~~~A~~lgIP~v~~~~~ 138 (493)
..+.+++++. +||+|++-.... .+..+|++||+|.+...+.
T Consensus 102 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3456667766 899999775443 4778999999999987643
No 178
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=26.35 E-value=3.4e+02 Score=23.97 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCCcEEEECCcchh----HHHHHHHcCCeEEEEe
Q 011099 97 ALRSTISAMKYRPTALIVDLFGTE----AMAVADEFEMLKYMFI 136 (493)
Q Consensus 97 ~l~~ll~~~~~~~DlVI~D~~~~~----a~~~A~~lgIP~v~~~ 136 (493)
.+..++.. ++|.||....... ....+...|||+|.+.
T Consensus 53 ~i~~l~~~---~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 53 VLEQAIAK---NPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHHH---CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHh---CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 34445544 8999997654332 3445677899998874
No 179
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=26.31 E-value=40 Score=26.51 Aligned_cols=32 Identities=9% Similarity=0.027 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
+||+++..+ . --..+++.|.++ ||+|+++...
T Consensus 7 ~~v~I~G~G---~--iG~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSE---A--AGVGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCS---H--HHHHHHHHHHHT-TCCEEEEESC
T ss_pred CEEEEECCC---H--HHHHHHHHHHHC-CCeEEEEECC
Confidence 578888653 3 246799999999 9999998754
No 180
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=25.94 E-value=41 Score=31.09 Aligned_cols=40 Identities=10% Similarity=0.194 Sum_probs=30.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhhh
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQLS 52 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~~ 52 (493)
|+|+++-.|+.| ..+|..|++. ||+|+++..... +.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~-g~~V~~~~r~~~-~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKT-GHCVSVVSRSDY-ETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHT-TCEEEEECSTTH-HHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhC-CCeEEEEeCChH-HHHHhC
Confidence 579999888777 4578899999 999999987652 344444
No 181
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=25.76 E-value=39 Score=26.70 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+.||+++.++..| ..+|+.|.++ ||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHC-CCCEEEEECCH
Confidence 4689998876544 5789999999 99999998763
No 182
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=25.68 E-value=56 Score=30.10 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+|+|+++..+ -...++++++++ ||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~-G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDE-GFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHT-TCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhC-CCEEEEEECCC
Confidence 4789998865 567899999999 99999887663
No 183
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=25.59 E-value=65 Score=28.78 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=24.6
Q ss_pred CCCCcEEE-ECCc-chhHHHHHHHcCCeEEEEecch
Q 011099 106 KYRPTALI-VDLF-GTEAMAVADEFEMLKYMFIASN 139 (493)
Q Consensus 106 ~~~~DlVI-~D~~-~~~a~~~A~~lgIP~v~~~~~~ 139 (493)
...||+|| .|+. ..-|+.=|.++|||+|.+.-+.
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 45899987 5653 3346667899999999986554
No 184
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=25.42 E-value=65 Score=25.63 Aligned_cols=35 Identities=9% Similarity=0.102 Sum_probs=28.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
.+++++.-+ .=+.|++++++.|.++ |.+|+++ ...
T Consensus 19 ~~~llIaGG--~GiaPl~sm~~~l~~~-~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAY--TGIVEVYPIAKAWQEI-GNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEET--THHHHHHHHHHHHHHT-TCEEEEE-EEE
T ss_pred CeEEEEECc--CcHHHHHHHHHHHHhc-CCcEEEE-EeC
Confidence 567777755 3599999999999999 8999998 554
No 185
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=25.40 E-value=34 Score=30.95 Aligned_cols=50 Identities=10% Similarity=0.047 Sum_probs=35.5
Q ss_pred cccccCCchHHHHHHHh------CCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcc
Q 011099 370 GFLTHCGWNSTMESIVN------GVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAE 441 (493)
Q Consensus 370 ~~i~HgG~gs~~eal~~------GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 441 (493)
++|.=||=||+.++... ++|++++|.. .+|.- ..+.++++.++++.++++
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lgfl----------~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLGFY----------ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCCSS----------CCBCGGGHHHHHHHHHTT
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCCcC----------CcCCHHHHHHHHHHHHcC
Confidence 99999999999999875 8898888751 11211 123456677777777765
No 186
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=25.23 E-value=80 Score=25.24 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=29.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 8 VALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 8 vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
++++..+..-.+++.+.+|...++. |++|+++.+..
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~-g~eV~iF~t~~ 46 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAAS-GYEVNLFFTFW 46 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHc-CCcEEEEEehH
Confidence 3444455678889999999999999 99999999875
No 187
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=25.12 E-value=41 Score=31.69 Aligned_cols=38 Identities=13% Similarity=0.214 Sum_probs=29.5
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|.++..+|+++-.+..| +.+|..|+++ |++|+++-...
T Consensus 1 Mm~~~~dVvIIGgGi~G-----l~~A~~La~~-G~~V~lle~~~ 38 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVG-----VTIAHELAKR-GEEVTVIEKRF 38 (382)
T ss_dssp -CCSBCSEEEECCSHHH-----HHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCcCCEEEECCCHHH-----HHHHHHHHHC-CCeEEEEeCCC
Confidence 55556789999877555 8899999999 99999986553
No 188
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=24.91 E-value=55 Score=30.30 Aligned_cols=23 Identities=4% Similarity=-0.077 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhcCCceEEEEEcCC
Q 011099 21 PVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 21 P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
--.+||+++.++ |++||+++.+.
T Consensus 67 mG~aiAe~~~~~-Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAA-GYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHT-TCEEEEEEETT
T ss_pred HHHHHHHHHHHC-CCEEEEEecCC
Confidence 456899999999 99999999864
No 189
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=24.90 E-value=39 Score=30.95 Aligned_cols=34 Identities=12% Similarity=0.079 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 4 RKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 4 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
++++|.|+-.+..| ..+|+.|++. ||+|+++...
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRA-GLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHC-CCeEEEEECC
Confidence 35889999877666 4689999999 9999988543
No 190
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=24.42 E-value=3.9e+02 Score=24.81 Aligned_cols=63 Identities=16% Similarity=0.153 Sum_probs=39.7
Q ss_pred cCCChhhhcCCCCcccccccCCc----hHHHHHHHhCCceee-cccch--hcchhhHhhhhheeeeEEee
Q 011099 355 MWAPQPEILAHPSVGGFLTHCGW----NSTMESIVNGVPMIV-WPLYA--EQKMNATMLTEELRVAIRSK 417 (493)
Q Consensus 355 ~~~pq~~lL~~~~~~~~i~HgG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~~v~e~~Gvg~~~~ 417 (493)
-|-...++|..+++.+++--.-. --+.+||.+|++++| -|+.. ++-.-...++++.|+-+.+.
T Consensus 76 ~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~ 145 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSIL 145 (361)
T ss_dssp EESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred ccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 35577889988766677643332 246789999999999 78753 23222222345667665543
No 191
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=24.37 E-value=4.2e+02 Score=24.68 Aligned_cols=42 Identities=7% Similarity=0.047 Sum_probs=35.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCch
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSS 48 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 48 (493)
.-++++..|+.|=-.-.+.++..++.+ |..|.|++.+...+.
T Consensus 64 ~ii~I~G~pGsGKTtLal~la~~~~~~-g~~vlyid~E~s~~~ 105 (356)
T 1u94_A 64 RIVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALDP 105 (356)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCCH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCCccH
Confidence 346788888999999999999999999 999999999865443
No 192
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=24.26 E-value=2.1e+02 Score=24.83 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=28.8
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 7 HVALLAS-PGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 7 ~vl~~~~-p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
.|-+++. .+.|=-.-++..+..+..+ |.+|.++.+.-
T Consensus 29 ~I~vitG~M~sGKTT~Llr~~~r~~~~-g~kvli~kp~~ 66 (219)
T 3e2i_A 29 WIECITGSMFSGKSEELIRRLRRGIYA-KQKVVVFKPAI 66 (219)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHT-TCCEEEEEEC-
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHc-CCceEEEEecc
Confidence 3444444 4778888899999999999 99999888764
No 193
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=23.66 E-value=1.2e+02 Score=26.91 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCCcEEEECCcch------hHHHHHHHcCCeEEEEec
Q 011099 97 ALRSTISAMKYRPTALIVDLFGT------EAMAVADEFEMLKYMFIA 137 (493)
Q Consensus 97 ~l~~ll~~~~~~~DlVI~D~~~~------~a~~~A~~lgIP~v~~~~ 137 (493)
.+.+++++. +||+|++-.... .+..+|++||+|.+...+
T Consensus 104 ~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARAE--GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 445556554 799999765443 477899999999998754
No 194
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=23.64 E-value=2.8e+02 Score=25.39 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=0.0
Q ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCC
Q 011099 271 SVIYVSFGSGGTLSSKQTMELAWGLEQ-SKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDV 349 (493)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 349 (493)
.+.+|+.|.++. .++.++.. .+.+++.+. ..-++.........
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~-----------------------------d~~~~~~~~~~~~~ 50 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIA-----------------------------SRRLENAQKMAKEL 50 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEB-----------------------------CSSSHHHHHHHHHT
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEE-----------------------------eCCHHHHHHHHHHc
Q ss_pred ceeeccCCChhhhcCCCCcccccccCCchH----HHHHHHhCCceee---cccchhcchhhHhhhhheeeeEEeeccCCC
Q 011099 350 GLVVPMWAPQPEILAHPSVGGFLTHCGWNS----TMESIVNGVPMIV---WPLYAEQKMNATMLTEELRVAIRSKEVPSE 422 (493)
Q Consensus 350 ~~~~~~~~pq~~lL~~~~~~~~i~HgG~gs----~~eal~~GvP~l~---~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~ 422 (493)
++.. -+-...++|..+++.+++--.-... +.+|+.+|+++++ +-...++-.-...++++.|+-+.+.
T Consensus 51 ~~~~-~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~----- 124 (330)
T 3e9m_A 51 AIPV-AYGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA----- 124 (330)
T ss_dssp TCCC-CBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC-----
T ss_pred CCCc-eeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE-----
Q ss_pred CCccchHHHHHHHHHHhcccc
Q 011099 423 KSVVERGEIEMMVRRIVAEKQ 443 (493)
Q Consensus 423 ~~~~~~~~l~~ai~~vl~~~~ 443 (493)
-...-.-..+.+++++.+..
T Consensus 125 -~~~r~~p~~~~~k~~i~~g~ 144 (330)
T 3e9m_A 125 -QKSVFLPITQKVKATIQEGG 144 (330)
T ss_dssp -CSGGGCHHHHHHHHHHHTTT
T ss_pred -EhhhhCHHHHHHHHHHhCCC
No 195
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=23.52 E-value=2.7e+02 Score=25.52 Aligned_cols=101 Identities=17% Similarity=0.039 Sum_probs=63.1
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcc
Q 011099 290 ELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVG 369 (493)
Q Consensus 290 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~ 369 (493)
++.+.++..+..++.+.+.. .-+|+.+.+..+...+-+ |++
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~--------------------------~ilp~~il~~~~~g~iNi-----------HpS-- 112 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYG--------------------------LILPKAVLEMPRLGCINV-----------HGS-- 112 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCC--------------------------SCCCHHHHHSSTTCEEEE-----------ESS--
T ss_pred HHHHHHHhcCCCEEEEeecc--------------------------ccCCHHHHhhccCCEEEE-----------cCC--
Confidence 45667777888888888543 456777766544333333 555
Q ss_pred cccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 370 GFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 370 ~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=-.-|+..+..|+.+|....++=++ .+..+.+.-+. +.- +.+. ..-|.++|.+.+.++
T Consensus 113 LLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~-q~~--~~I~------~~dt~~~L~~rl~~~ 174 (314)
T 1fmt_A 113 LLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLY-KLS--CPIT------AEDTSGTLYDKLAEL 174 (314)
T ss_dssp STTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE-EEE--EECC------TTCCHHHHHHHHHHH
T ss_pred cCcCCCCcCHHHHHHHcCCCceEEEEEEEcccCcCCCEEE-EEE--EecC------CCCCHHHHHHHHHHH
Confidence 555567899999999999998887654 24444444432 222 2222 344777777766543
No 196
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=23.46 E-value=57 Score=28.38 Aligned_cols=38 Identities=13% Similarity=0.028 Sum_probs=33.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|+|+|..-|+.|=-.-...||..|+++ |++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 568887788889999999999999999 99999987654
No 197
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=23.40 E-value=44 Score=30.44 Aligned_cols=30 Identities=7% Similarity=-0.047 Sum_probs=24.9
Q ss_pred CCCCcccccccCCchHHHHHHHh----CCceeeccc
Q 011099 364 AHPSVGGFLTHCGWNSTMESIVN----GVPMIVWPL 395 (493)
Q Consensus 364 ~~~~~~~~i~HgG~gs~~eal~~----GvP~l~~P~ 395 (493)
..++ ++|.=||=||+.+++.. ++|.++++.
T Consensus 62 ~~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQAD--LAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3456 99999999999999854 789888873
No 198
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.18 E-value=69 Score=29.94 Aligned_cols=37 Identities=11% Similarity=0.265 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCCcEEEECCcchhH-HHHHHHcCCeEEEEe
Q 011099 97 ALRSTISAMKYRPTALIVDLFGTEA-MAVADEFEMLKYMFI 136 (493)
Q Consensus 97 ~l~~ll~~~~~~~DlVI~D~~~~~a-~~~A~~lgIP~v~~~ 136 (493)
.++.+++ + +||+||........ ..+.+.+|||++.+.
T Consensus 88 n~E~Ila-l--~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLIT-L--QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CHHHHHH-H--CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CHHHHhc-C--CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 3444444 4 89999976543222 235678899998874
No 199
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=23.00 E-value=1.2e+02 Score=26.94 Aligned_cols=39 Identities=8% Similarity=0.033 Sum_probs=28.9
Q ss_pred HHHHHHHhcCCCCcEEEECCcch------hHHHHHHHcCCeEEEEec
Q 011099 97 ALRSTISAMKYRPTALIVDLFGT------EAMAVADEFEMLKYMFIA 137 (493)
Q Consensus 97 ~l~~ll~~~~~~~DlVI~D~~~~------~a~~~A~~lgIP~v~~~~ 137 (493)
.+.+++++. +||+|++-.... -+..+|++||+|.+...+
T Consensus 107 ~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 107 VLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 455556654 799999765443 477899999999998754
No 200
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=22.95 E-value=1.4e+02 Score=23.10 Aligned_cols=27 Identities=11% Similarity=0.191 Sum_probs=22.1
Q ss_pred cCHHHHHHHHHHHHhcCCceE-EEEEcCC
Q 011099 17 GHLIPVLELGKRLVIQNNHHA-TIFVVAN 44 (493)
Q Consensus 17 GHv~P~l~LA~~L~~r~Gh~V-t~~~~~~ 44 (493)
-.....+.+|.++.+. ||+| +++-..+
T Consensus 15 ~~~~~al~~a~a~~~~-g~~v~~vff~~d 42 (130)
T 2hy5_A 15 QASDSAYQFAKAALEK-GHEIFRVFFYHD 42 (130)
T ss_dssp THHHHHHHHHHHHHHT-TCEEEEEEECGG
T ss_pred HHHHHHHHHHHHHHhc-CCeeCEEEEech
Confidence 3456789999999999 9999 8887664
No 201
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=22.84 E-value=2.3e+02 Score=23.50 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=35.0
Q ss_pred cchHHHHHHHHHHhcc--cchHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhcc
Q 011099 426 VERGEIEMMVRRIVAE--KQGHAIRNRVEELKHSAQKALINGGSSYNSLSKIAHECENSL 483 (493)
Q Consensus 426 ~~~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~ 483 (493)
+|+++ .+.++++... ++-.+.|+.....++.+++.+..+-.....|+++++++.+.+
T Consensus 68 LT~EQ-q~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr 126 (175)
T 3lay_A 68 LTTEQ-QATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLG 126 (175)
T ss_dssp CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 45543 3344445432 111235566666666677766667777788999998888766
No 202
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=22.77 E-value=81 Score=25.97 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=28.3
Q ss_pred CEEEEEcCCCcc-----CHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 6 PHVALLASPGMG-----HLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 6 ~~vl~~~~p~~G-----Hv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
.+|+++| ++| --+++-.|++.|.++ |.+|.|..++-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 3566665 343 356899999999999 99999999883
No 203
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=22.68 E-value=3e+02 Score=22.81 Aligned_cols=112 Identities=12% Similarity=0.078 Sum_probs=62.2
Q ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCC-chhHHhhhCCC
Q 011099 271 SVIYVSFGSGGTLSSKQTMELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYL-PEGFLIRTRDV 349 (493)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~~~~~~ 349 (493)
.+++.-.||.... ...++++.|.+.+..+-.++..... ..+ |+.+. ...+
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~------------------------~fi~~~~l~-~l~~- 57 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGR------------------------KFINGEILK-QFCD- 57 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGG------------------------GGSCHHHHH-HHCS-
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHH------------------------HHhhHHHHH-HhcC-
Confidence 3666566665442 2456677777778777666633211 222 22332 2222
Q ss_pred ceee---ccCCChhhhcCCCCcccccccCCchHHH-------------HHHHhCCceeecccch----hc---chhhHhh
Q 011099 350 GLVV---PMWAPQPEILAHPSVGGFLTHCGWNSTM-------------ESIVNGVPMIVWPLYA----EQ---KMNATML 406 (493)
Q Consensus 350 ~~~~---~~~~pq~~lL~~~~~~~~i~HgG~gs~~-------------eal~~GvP~l~~P~~~----DQ---~~na~~v 406 (493)
.+.. ..|+++.++-..++. .+|--|-+||+. -++..++|++++|-.. .. ..|-.++
T Consensus 58 ~v~~~~~~~~~~hi~l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L 136 (175)
T 3qjg_A 58 NYYDEFEDPFLNHVDIANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLL 136 (175)
T ss_dssp CEECTTTCTTCCHHHHHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHH
T ss_pred CEEecCCCCccccccccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHH
Confidence 2221 145667776555553 677777777654 3577899999999432 22 3455566
Q ss_pred hhheeee
Q 011099 407 TEELRVA 413 (493)
Q Consensus 407 ~e~~Gvg 413 (493)
+++|+=
T Consensus 137 -~~~G~~ 142 (175)
T 3qjg_A 137 -KDYGVS 142 (175)
T ss_dssp -HHTTCE
T ss_pred -HHCCCE
Confidence 466653
No 204
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=22.62 E-value=1.6e+02 Score=24.27 Aligned_cols=48 Identities=15% Similarity=0.058 Sum_probs=33.9
Q ss_pred HHHHHhhHHHHHHHHhcCCCCcEEEECCcchh---------------HHHHHHHcCCeEEEEecc
Q 011099 89 VMMHESIPALRSTISAMKYRPTALIVDLFGTE---------------AMAVADEFEMLKYMFIAS 138 (493)
Q Consensus 89 ~~~~~~~~~l~~ll~~~~~~~DlVI~D~~~~~---------------a~~~A~~lgIP~v~~~~~ 138 (493)
..+....+.+.+++++. +||.+.++..++. +..++...|+|+.-+.+.
T Consensus 46 ~RL~~I~~~l~~~i~~~--~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 46 ERVGRIHARVLEVLHRF--RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHHHHHHHH--CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHHHHHHHh--CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 34455667888999988 9999987754431 224678889998887544
No 205
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=22.43 E-value=83 Score=26.02 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=28.2
Q ss_pred CEEEEEcCCCcc-----CHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 6 PHVALLASPGMG-----HLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 6 ~~vl~~~~p~~G-----Hv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
.+|+++| ++| --+++-.|++.|.++ |.+|.|..++-
T Consensus 23 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITP--GYGLCAAKAQYPIADLVKMLSEQ-GKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEE--CHHHHHTTTHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 3566665 333 356899999999999 99999999883
No 206
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=22.17 E-value=72 Score=29.76 Aligned_cols=37 Identities=22% Similarity=0.187 Sum_probs=29.1
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
|.++..+|+++-.+..| +.+|..|+++ |++|+++-..
T Consensus 2 ~m~~~~dVvVIG~Gi~G-----ls~A~~La~~-G~~V~vle~~ 38 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIG-----LSSALILARK-GYSVHILARD 38 (363)
T ss_dssp CCCCSCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEESS
T ss_pred CCCCCCCEEEECCCHHH-----HHHHHHHHhC-CCEEEEEecc
Confidence 44456789999877544 7889999999 9999999644
No 207
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=22.06 E-value=1.3e+02 Score=27.18 Aligned_cols=38 Identities=18% Similarity=0.099 Sum_probs=24.3
Q ss_pred CCCEEEEE-cCCCccCHHHH--HHHHHHHHhcCCceEEEEEc
Q 011099 4 RKPHVALL-ASPGMGHLIPV--LELGKRLVIQNNHHATIFVV 42 (493)
Q Consensus 4 ~~~~vl~~-~~p~~GHv~P~--l~LA~~L~~r~Gh~Vt~~~~ 42 (493)
+.|+|+++ ..|-..-++-. -...+.|.+. ||+|+++--
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~-G~eV~v~DL 61 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQA-GHEVQVSDL 61 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT-TCEEEEEET
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHC-CCeEEEEEc
Confidence 46888555 45554444442 2466778889 999999753
No 208
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=22.03 E-value=67 Score=28.37 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=31.7
Q ss_pred CCCCCCEEEEEc--CCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 1 MEIRKPHVALLA--SPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 1 m~~~~~~vl~~~--~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
|..++++++.+. -|+.|--.-...||..|+++ |++|.++-...
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLARL-GKRVLLVDLDP 45 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 666677766664 45668889999999999999 99999987654
No 209
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=21.98 E-value=39 Score=31.17 Aligned_cols=31 Identities=13% Similarity=0.028 Sum_probs=24.1
Q ss_pred cCCCCcccccccCCchHHHHHHHh----CCceeeccc
Q 011099 363 LAHPSVGGFLTHCGWNSTMESIVN----GVPMIVWPL 395 (493)
Q Consensus 363 L~~~~~~~~i~HgG~gs~~eal~~----GvP~l~~P~ 395 (493)
...++ ++|.-||-||+.+++.. ++|+++++.
T Consensus 73 ~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34556 99999999999999865 889888874
No 210
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=21.91 E-value=1.2e+02 Score=24.51 Aligned_cols=39 Identities=10% Similarity=0.115 Sum_probs=28.6
Q ss_pred CCEEEE-EcCCCc-cCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 5 KPHVAL-LASPGM-GHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 5 ~~~vl~-~~~p~~-GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
.|++++ +..|-. -.+.-++-++..|.++ ||+|++++++.
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~-G~~v~VA~npA 46 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKK-GFRVTVTANPA 46 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhc-CCeeEEecCHH
Confidence 366544 445555 3444488999999999 99999999884
No 211
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=21.85 E-value=79 Score=29.31 Aligned_cols=30 Identities=3% Similarity=0.096 Sum_probs=21.1
Q ss_pred CCcEEEECCcchhHHHHHHHcCCeEEEEec
Q 011099 108 RPTALIVDLFGTEAMAVADEFEMLKYMFIA 137 (493)
Q Consensus 108 ~~DlVI~D~~~~~a~~~A~~lgIP~v~~~~ 137 (493)
+||+||..........--++.|||++.+..
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 999999875433333445678999998753
No 212
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=21.83 E-value=1.4e+02 Score=25.11 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCC--CcEEEECCcchhH------HHHHHHcCCeEEEEe
Q 011099 97 ALRSTISAMKYR--PTALIVDLFGTEA------MAVADEFEMLKYMFI 136 (493)
Q Consensus 97 ~l~~ll~~~~~~--~DlVI~D~~~~~a------~~~A~~lgIP~v~~~ 136 (493)
.+.++++++..+ +|+|++|-..++. ..+...+|+|+|.+.
T Consensus 51 ~i~~~~~~l~~~p~~~vvllDG~g~agfn~~di~~l~~~~~~P~I~V~ 98 (184)
T 2qh9_A 51 KLISMVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYRETKIPVVVVM 98 (184)
T ss_dssp HHHHHHTTCTTTTTEEEEEESSSEETTTEECCHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHhcCCCCCCcEEEECCEeeccCCEeCHHHHHHhhCCCEEEEE
Confidence 445556565334 5999999655542 248889999999875
No 213
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=21.38 E-value=80 Score=29.53 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=25.5
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
|..++++|+++ |+.|.+ -..|++.|.++ ||+|+.++-.
T Consensus 1 M~~~~~~ilVt--GatG~i--G~~l~~~L~~~-g~~V~~~~R~ 38 (352)
T 1xgk_A 1 MAQQKKTIAVV--GATGRQ--GASLIRVAAAV-GHHVRAQVHS 38 (352)
T ss_dssp --CCCCCEEEE--STTSHH--HHHHHHHHHHT-TCCEEEEESC
T ss_pred CCCCCCEEEEE--CCCCHH--HHHHHHHHHhC-CCEEEEEECC
Confidence 55545667665 445544 35688999999 9999998754
No 214
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=21.22 E-value=2.2e+02 Score=26.44 Aligned_cols=28 Identities=11% Similarity=0.030 Sum_probs=22.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011099 283 LSSKQTMELAWGLEQSKQRFIWVVRPPL 310 (493)
Q Consensus 283 ~~~~~~~~~~~al~~~~~~~i~~~~~~~ 310 (493)
.+.+....+.++++....+.||..+...
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY 89 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 3556688899999988889999886653
No 215
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.21 E-value=1e+02 Score=27.05 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=23.8
Q ss_pred HHHHHHhcCCCCcEEEECCcch--hHHHHHHHcCCeEEEEe
Q 011099 98 LRSTISAMKYRPTALIVDLFGT--EAMAVADEFEMLKYMFI 136 (493)
Q Consensus 98 l~~ll~~~~~~~DlVI~D~~~~--~a~~~A~~lgIP~v~~~ 136 (493)
++.++ .+ +||+||...... ....--++.|||++.+.
T Consensus 52 ~E~i~-~l--~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 52 AEGIL-AM--KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHH-TT--CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHH-cc--CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 34444 44 999999876542 23344567899998874
No 216
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=21.20 E-value=2e+02 Score=27.78 Aligned_cols=31 Identities=10% Similarity=0.054 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
+|+++. .|. -.+.+++++++. |++|.++...
T Consensus 8 kiLI~g---~g~--~a~~i~~aa~~~-G~~~v~v~~~ 38 (446)
T 3ouz_A 8 SILIAN---RGE--IALRALRTIKEM-GKKAICVYSE 38 (446)
T ss_dssp EEEECC---CHH--HHHHHHHHHHHT-TCEEEEEEEG
T ss_pred eEEEEC---CCH--HHHHHHHHHHHc-CCEEEEEEcC
Confidence 566643 232 567899999999 9999888654
No 217
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.10 E-value=40 Score=30.22 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=38.1
Q ss_pred CCCcccccccCCchHHHHHHHh---CCceeecccchhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHHhcc
Q 011099 365 HPSVGGFLTHCGWNSTMESIVN---GVPMIVWPLYAEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRIVAE 441 (493)
Q Consensus 365 ~~~~~~~i~HgG~gs~~eal~~---GvP~l~~P~~~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 441 (493)
.++ ++|+=||=||+.++... ++|.++++. + + .|.- ..+.++++.++++.++++
T Consensus 41 ~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~-G-------~----~Gfl----------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKA-G-------R----LGFL----------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCS--EEEEEECHHHHHHHHTTBCTTCEEEEEES-S-------S----CCSS----------CCBCGGGHHHHHHHHHTT
T ss_pred CCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEEC-C-------C----CCcc----------CcCCHHHHHHHHHHHHcC
Confidence 455 99999999999999887 788888863 1 1 1211 124567788888888765
Q ss_pred c
Q 011099 442 K 442 (493)
Q Consensus 442 ~ 442 (493)
+
T Consensus 97 ~ 97 (258)
T 1yt5_A 97 N 97 (258)
T ss_dssp C
T ss_pred C
Confidence 3
No 218
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=21.04 E-value=69 Score=29.28 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEE
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFV 41 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~ 41 (493)
+|.|+-.+..|. .+|+.|.+. ||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~-G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEA-GYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHT-TCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHC-CCeEEEEe
Confidence 599999988874 789999999 99999864
No 219
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=20.96 E-value=90 Score=28.39 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
+|+++ |+.|.+ -..|+++|.++ ||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~-g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKL-GHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHT-TCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHC-CCcEEEEECCC
Confidence 56555 455555 46788999999 99999887553
No 220
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=20.87 E-value=61 Score=29.57 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=27.5
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 1 MEIRKPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
|..+-++|.|+-.|..|+ .||..|+++ ||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~~-G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAAT-GHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHhC-CCeEEEEECC
Confidence 333335799998887775 588899999 9999987654
No 221
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=20.64 E-value=3.3e+02 Score=24.95 Aligned_cols=101 Identities=18% Similarity=0.019 Sum_probs=63.1
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcc
Q 011099 290 ELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVG 369 (493)
Q Consensus 290 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~ 369 (493)
++.+.++..+..++.+.+.. .-+|+.+.+..+...+-+ |++
T Consensus 71 ~~~~~l~~~~~Dliv~~~~~--------------------------~ilp~~il~~~~~g~iNi-----------HpS-- 111 (314)
T 3tqq_A 71 VEQEKLIAMNADVMVVVAYG--------------------------LILPKKALNAFRLGCVNV-----------HAS-- 111 (314)
T ss_dssp HHHHHHHTTCCSEEEEESCC--------------------------SCCCHHHHTSSTTCEEEE-----------ESS--
T ss_pred HHHHHHHhcCCCEEEEcCcc--------------------------cccCHHHHhhCcCCEEEe-----------cCc--
Confidence 56677888888888888543 456776665544322333 666
Q ss_pred cccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 370 GFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 370 ~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=-+-|+..+..|+.+|....++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 112 lLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~-q~--~~~I~------~~dt~~~L~~rl~~~ 173 (314)
T 3tqq_A 112 LLPRWRGAAPIQRAILAGDRETGISIMQMNEGLDTGDVLA-KS--ACVIS------SEDTAADLHDRLSLI 173 (314)
T ss_dssp CTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred cccCCCCccHHHHHHHcCCCeeEEEEEeeecCCCCCCEEE-EE--EEeeC------CCCCHHHHHHHHHHH
Confidence 556667999999999999998777653 24444444432 21 22222 334677777766543
No 222
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=20.63 E-value=1.2e+02 Score=25.11 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcC
Q 011099 6 PHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVA 43 (493)
Q Consensus 6 ~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 43 (493)
|+|+++ ++.|-+ -..|++.|.++ ||+|+.++-.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~-g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQA-GYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHC-CCeEEEEEeC
Confidence 566665 444533 46789999999 9999998754
No 223
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=20.58 E-value=68 Score=28.19 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=21.1
Q ss_pred ccCHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 16 MGHLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 16 ~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
.|. --.+||++|.++ |++|++++.+.
T Consensus 28 SG~--mG~aiA~~~~~~-Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSA-GYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHC-CCEEEEEeCCc
Confidence 553 356789999999 99999998764
No 224
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=20.50 E-value=4.3e+02 Score=24.26 Aligned_cols=101 Identities=16% Similarity=0.024 Sum_probs=62.6
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCCccccccccCCCCCcccccccccCCCchhHHhhhCCCceeeccCCChhhhcCCCCcc
Q 011099 290 ELAWGLEQSKQRFIWVVRPPLDHDVFDSYLTAGSGALNTAEGALDYHYLPEGFLIRTRDVGLVVPMWAPQPEILAHPSVG 369 (493)
Q Consensus 290 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~ 369 (493)
++.+.++..+..++.+.+.. .-+|+.+.+..+...+-+ |++
T Consensus 76 ~~~~~l~~~~~Dliv~~~y~--------------------------~ilp~~~l~~~~~g~iNi-----------HpS-- 116 (318)
T 3q0i_A 76 ESKQQLAALNADLMVVVAYG--------------------------LLLPKVVLDTPKLGCINV-----------HGS-- 116 (318)
T ss_dssp HHHHHHHTTCCSEEEESSCC--------------------------SCCCHHHHTSSTTCEEEE-----------ESS--
T ss_pred HHHHHHHhcCCCEEEEeCcc--------------------------ccCCHHHHhhCcCCEEEe-----------CCc--
Confidence 56677888888888877543 456776665544322333 666
Q ss_pred cccccCCchHHHHHHHhCCceeecccc--hhcchhhHhhhhheeeeEEeeccCCCCCccchHHHHHHHHHH
Q 011099 370 GFLTHCGWNSTMESIVNGVPMIVWPLY--AEQKMNATMLTEELRVAIRSKEVPSEKSVVERGEIEMMVRRI 438 (493)
Q Consensus 370 ~~i~HgG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~v~e~~Gvg~~~~~~~~~~~~~~~~~l~~ai~~v 438 (493)
+.=-+-|+..+..|+.+|....++=++ .+..+-+.-+. +. -+.+. ..-|.++|.+.+.++
T Consensus 117 lLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~-q~--~~~I~------~~dt~~~L~~rl~~~ 178 (318)
T 3q0i_A 117 ILPRWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLK-IA--TLPIE------ASDTSASMYDKLAEL 178 (318)
T ss_dssp STTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE-EE--EEECC------TTCCHHHHHHHHHHH
T ss_pred cCcCCCCcCHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEE-EE--EEeeC------CCCCHHHHHHHHHHH
Confidence 566677999999999999999877654 23444444332 21 22222 334677777766543
No 225
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=20.45 E-value=93 Score=26.24 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=28.1
Q ss_pred CEEEEEcCCCcc-----CHHHHHHHHHHHHhcCCceEEEEEcCC
Q 011099 6 PHVALLASPGMG-----HLIPVLELGKRLVIQNNHHATIFVVAN 44 (493)
Q Consensus 6 ~~vl~~~~p~~G-----Hv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 44 (493)
.+|+++| +|| --+++-.|++.|.++ |.+|.|..++-
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHc-CCeEEEEeccc
Confidence 3566665 333 356889999999999 99999999883
No 226
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=20.18 E-value=98 Score=31.38 Aligned_cols=46 Identities=15% Similarity=-0.023 Sum_probs=39.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhh
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQL 51 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~ 51 (493)
+.+|++.+.++..|-....-++..|..+ |++|..+......+.+..
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~-G~eVi~LG~~vP~e~iv~ 143 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCN-NYEIVDLGVMVPAEKILR 143 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTT-TCEEEECCSSBCHHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHH
Confidence 5789999999999999999999999999 999999887654444333
No 227
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=20.15 E-value=1.4e+02 Score=29.44 Aligned_cols=45 Identities=7% Similarity=0.003 Sum_probs=35.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEcCCCCchhhh
Q 011099 7 HVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVVANDTSSEQL 51 (493)
Q Consensus 7 ~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~v~~ 51 (493)
-+++...|+.|=-.-.+.+|..++.+.|..|.+++.+.....+..
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l~~ 288 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEETAE 288 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHHHH
Confidence 467778899999999999999987632789999999876544333
No 228
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=20.12 E-value=1.1e+02 Score=23.45 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=26.9
Q ss_pred CCCCCCEEEEEcCCCc-cCH-HHHHHHHHHHHhcCC--ceEEEEEcC
Q 011099 1 MEIRKPHVALLASPGM-GHL-IPVLELGKRLVIQNN--HHATIFVVA 43 (493)
Q Consensus 1 m~~~~~~vl~~~~p~~-GHv-~P~l~LA~~L~~r~G--h~Vt~~~~~ 43 (493)
|+.. ++++|+-+-.. -.. +-.+..|....++ | |+|+++.-.
T Consensus 4 ~~~~-~K~~ivi~s~d~~~~~~~al~~A~~a~~~-G~~~eV~i~~~G 48 (117)
T 2fb6_A 4 MSAN-DKLTILWTTDNKDTVFNMLAMYALNSKNR-GWWKHINIILWG 48 (117)
T ss_dssp SSTT-SEEEEEECCCCHHHHHHTHHHHHHHHHHH-TSCSEEEEEECS
T ss_pred cccC-CeEEEEEEcCChHHHHHHHHHHHHHHHHc-CCCCcEEEEEEC
Confidence 4444 66666654432 222 3367888888999 8 899998865
No 229
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=20.02 E-value=70 Score=29.80 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCceEEEEEc
Q 011099 5 KPHVALLASPGMGHLIPVLELGKRLVIQNNHHATIFVV 42 (493)
Q Consensus 5 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 42 (493)
+|+|+++-.|..| ..+|..|.+. ||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~-g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALK-GQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhC-CCEEEEEeC
Confidence 4899999877666 3478889999 999998854
Done!