Your job contains 1 sequence.
>011100
MDEQILLDRNFPLFAKPKSKTRSKPEPQPEPEPESKNAKTTQLEKFTNPDPNSTTTDSTV
TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH
RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH
VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL
LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME
DMGIRSAIIFVSTCRSCHLLSLLLEELDQEAVALHSFKSQSQRLSALHRFKSGQATILLA
TDVASRGLDIPTVDLVLNYDIPRYPRDYVHRVGRTARAGRGGLAVSFVTQNDVDLIHEIE
AVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGFEEKAKERKKQKLKMLAEKGS
LKKRSEKRKKSGE
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011100
(493 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032910 - symbol:RH36 "RNA helicase 36" specie... 1522 3.8e-156 1
UNIPROTKB|F1S7D9 - symbol:DDX49 "Uncharacterized protein"... 932 1.3e-93 1
UNIPROTKB|Q9Y6V7 - symbol:DDX49 "Probable ATP-dependent R... 929 2.7e-93 1
UNIPROTKB|E2RBM7 - symbol:DDX49 "Uncharacterized protein"... 924 9.0e-93 1
RGD|1311124 - symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box po... 919 3.0e-92 1
WB|WBGene00019219 - symbol:H20J04.4 species:6239 "Caenorh... 917 5.0e-92 1
MGI|MGI:2136689 - symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) bo... 913 1.3e-91 1
ZFIN|ZDB-GENE-031030-3 - symbol:ddx49 "DEAD (Asp-Glu-Ala-... 907 5.7e-91 1
UNIPROTKB|F1NYX0 - symbol:DDX49 "Uncharacterized protein"... 894 1.4e-89 1
UNIPROTKB|F1NA53 - symbol:DDX49 "Uncharacterized protein"... 891 2.8e-89 1
DICTYBASE|DDB_G0270396 - symbol:ddx49 "DEAD/DEAH box heli... 883 2.0e-88 1
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 869 6.0e-87 1
UNIPROTKB|Q29S22 - symbol:DDX47 "Probable ATP-dependent R... 853 3.0e-85 1
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 851 4.9e-85 1
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 851 4.9e-85 1
UNIPROTKB|E2RN03 - symbol:DDX47 "Uncharacterized protein"... 843 3.4e-84 1
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 840 7.2e-84 1
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 832 5.0e-83 1
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 815 3.2e-81 1
ZFIN|ZDB-GENE-050522-359 - symbol:zgc:112350 "zgc:112350"... 812 6.6e-81 1
DICTYBASE|DDB_G0280147 - symbol:ddx47 "DEAD/DEAH box heli... 806 2.9e-80 1
POMBASE|SPBC543.06c - symbol:dbp8 "ATP-dependent RNA heli... 805 3.7e-80 1
POMBASE|SPAC823.08c - symbol:SPAC823.08c "ATP-dependent R... 790 1.4e-78 1
TAIR|locus:2173517 - symbol:AT5G60990 species:3702 "Arabi... 790 1.4e-78 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 773 9.0e-77 1
UNIPROTKB|I3L976 - symbol:DDX47 "Uncharacterized protein"... 755 7.3e-75 1
SGD|S000001212 - symbol:DBP8 "ATPase, putative RNA helica... 751 1.9e-74 1
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ... 739 3.6e-73 1
UNIPROTKB|F1N0P2 - symbol:DDX49 "Uncharacterized protein"... 382 2.9e-72 2
CGD|CAL0004058 - symbol:DBP8 species:5476 "Candida albica... 729 4.1e-72 1
SGD|S000001107 - symbol:RRP3 "Protein involved in rRNA pr... 728 5.3e-72 1
FB|FBgn0010220 - symbol:Dbp45A "DEAD box protein 45A" spe... 707 8.9e-70 1
ASPGD|ASPL0000072637 - symbol:AN4903 species:162425 "Emer... 671 5.8e-66 1
GENEDB_PFALCIPARUM|PFB0860c - symbol:PFB0860c "RNA helica... 607 3.5e-59 1
UNIPROTKB|O96264 - symbol:PFB0860c "DEAD/DEAH box helicas... 607 3.5e-59 1
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas... 569 3.7e-55 1
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli... 562 2.1e-54 1
TAIR|locus:2130918 - symbol:AT4G16630 species:3702 "Arabi... 561 2.6e-54 1
TIGR_CMR|CPS_1125 - symbol:CPS_1125 "ATP-dependent RNA he... 560 3.4e-54 1
DICTYBASE|DDB_G0281711 - symbol:ddx27 "DEAD/DEAH box heli... 557 7.0e-54 1
TIGR_CMR|CPS_2658 - symbol:CPS_2658 "ATP-dependent RNA he... 556 8.9e-54 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 555 1.1e-53 1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 548 6.3e-53 1
UNIPROTKB|Q9KS53 - symbol:VC1407 "ATP-dependent RNA helic... 541 3.5e-52 1
TIGR_CMR|VC_1407 - symbol:VC_1407 "ATP-dependent RNA heli... 541 3.5e-52 1
CGD|CAL0003050 - symbol:HAS1 species:5476 "Candida albica... 540 4.4e-52 1
UNIPROTKB|Q5AK59 - symbol:HAS1 "ATP-dependent RNA helicas... 540 4.4e-52 1
WB|WBGene00022148 - symbol:Y71G12B.8 species:6239 "Caenor... 540 4.4e-52 1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he... 539 5.6e-52 1
CGD|CAL0000864 - symbol:DRS1 species:5476 "Candida albica... 512 6.1e-52 2
UNIPROTKB|Q5ACK7 - symbol:DRS1 "ATP-dependent RNA helicas... 512 6.1e-52 2
GENEDB_PFALCIPARUM|PFF1500c - symbol:PFF1500c "DEAD/DEAH ... 536 1.2e-51 1
UNIPROTKB|C6KTE4 - symbol:PFF1500c "DEAD/DEAH box ATP-dep... 536 1.2e-51 1
UNIPROTKB|A4QYM6 - symbol:DRS1 "ATP-dependent RNA helicas... 537 1.7e-51 1
UNIPROTKB|Q8EE19 - symbol:SO_2571 "ATP-dependent RNA heli... 533 2.4e-51 1
TIGR_CMR|SO_2571 - symbol:SO_2571 "ATP-dependent RNA heli... 533 2.4e-51 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 532 3.1e-51 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 532 3.1e-51 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 532 3.1e-51 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 532 3.1e-51 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 532 3.1e-51 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 532 3.1e-51 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 530 5.1e-51 1
UNIPROTKB|Q8ECL2 - symbol:SO_3125 "ATP-dependent RNA heli... 529 6.5e-51 1
TIGR_CMR|SO_3125 - symbol:SO_3125 "ATP-dependent RNA heli... 529 6.5e-51 1
POMBASE|SPAC1F7.02c - symbol:has1 "ATP-dependent RNA heli... 528 8.3e-51 1
SGD|S000003931 - symbol:DRS1 "Nucleolar DEAD-box protein ... 528 8.9e-51 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 526 1.3e-50 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 526 1.3e-50 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 506 1.4e-50 2
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli... 524 2.2e-50 1
UNIPROTKB|Q9KMW4 - symbol:VC_A0204 "ATP-dependent RNA hel... 521 4.6e-50 1
TIGR_CMR|VC_A0204 - symbol:VC_A0204 "ATP-dependent RNA he... 521 4.6e-50 1
UNIPROTKB|Q9KLE2 - symbol:VC_A0804 "ATP-dependent RNA hel... 520 5.8e-50 1
UNIPROTKB|Q9KLH6 - symbol:VC_A0768 "ATP-dependent RNA hel... 520 5.8e-50 1
TIGR_CMR|VC_A0768 - symbol:VC_A0768 "ATP-dependent RNA he... 520 5.8e-50 1
TIGR_CMR|VC_A0804 - symbol:VC_A0804 "ATP-dependent RNA he... 520 5.8e-50 1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 519 7.4e-50 1
TIGR_CMR|DET_0183 - symbol:DET_0183 "ATP-dependent RNA he... 518 9.5e-50 1
TAIR|locus:2152099 - symbol:AT5G65900 species:3702 "Arabi... 517 1.2e-49 1
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN... 515 2.0e-49 1
TIGR_CMR|CPS_3401 - symbol:CPS_3401 "ATP-dependent RNA he... 514 2.5e-49 1
UNIPROTKB|Q4K8U0 - symbol:deaD "Cold-shock DEAD box prote... 512 4.1e-49 1
MGI|MGI:1914192 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) bo... 510 6.7e-49 1
SGD|S000004903 - symbol:HAS1 "ATP-dependent RNA helicase"... 510 6.7e-49 1
UNIPROTKB|Q48PB7 - symbol:PSPPH_0449 "ATP-dependent RNA h... 507 1.4e-48 1
POMBASE|SPAC30D11.03 - symbol:ddx27 "ATP-dependent RNA he... 491 1.4e-48 2
DICTYBASE|DDB_G0282741 - symbol:ddx18 "DEAD/DEAH box heli... 506 1.8e-48 1
FB|FBgn0025140 - symbol:pit "pitchoune" species:7227 "Dro... 506 1.8e-48 1
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ... 506 1.8e-48 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 506 1.8e-48 1
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 506 1.8e-48 1
UNIPROTKB|P0A9P6 - symbol:deaD "DeaD, DEAD-box RNA helica... 505 2.3e-48 1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas... 505 2.3e-48 1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he... 505 2.3e-48 1
TAIR|locus:2086909 - symbol:AT3G18600 species:3702 "Arabi... 505 2.3e-48 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 504 2.9e-48 1
UNIPROTKB|Q0C4B9 - symbol:HNE_0695 "Putative ATP-dependen... 504 2.9e-48 1
UNIPROTKB|F1MSX0 - symbol:F1MSX0 "Uncharacterized protein... 502 4.7e-48 1
UNIPROTKB|F1N533 - symbol:DDX18 "Uncharacterized protein"... 502 4.7e-48 1
WARNING: Descriptions of 803 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
Identities = 296/443 (66%), Positives = 350/443 (79%)
Query: 18 KSKTRSKXXXXXXXXXXSKNAKTTQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKE 77
KS+ K + T Q EKFTNP+P+S TT +T F GLGLAEWAV+TCKE
Sbjct: 17 KSRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSAT-NFEGLGLAEWAVETCKE 75
Query: 78 LGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPT 137
LGMR+PTPVQTHC+PKIL G+DVLGLAQTGSGKTAAFALPILHRLAEDPYGV ALV+TPT
Sbjct: 76 LGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPT 135
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA+QLAEQFKALGS L+LRC V+VGGMD+LTQ SL++RPH+VI TPGRIKVLLE +P
Sbjct: 136 RELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNP 195
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELS 257
D+PPVFSRTKFLVLDEADRVLDVGF++ELR +FQCLPK+RQTLLFSATMTS+LQ LLE S
Sbjct: 196 DVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHS 255
Query: 258 ANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSC 317
+NKAYFYEAYEG KTV+TL QQ+IF K+ K++YL+H+LS+MED GIRSA+IFVSTCR+C
Sbjct: 256 SNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTC 315
Query: 318 HXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVL 377
+ E +A+HS SQS RLSAL +FKSG+ ILLATDVASRGLDIPTVDLV+
Sbjct: 316 QRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVI 375
Query: 378 NYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEV 437
NYDIPR PRDY S +T+ DV LIH+IE VGK++E + K
Sbjct: 376 NYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITD 435
Query: 438 LSDITRVYKARRVATMKLMDDGF 460
++T+V KA+RVA MK++D+GF
Sbjct: 436 SLEVTKVSKAKRVAMMKMLDNGF 458
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 190/398 (47%), Positives = 257/398 (64%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
FA LGL+ W V+ C++LG+++PTPVQ CIP ILEG+D LG A+TGSGKTAAF LPIL +
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ ++VGGMD++ QA L +PHV
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNRQ 238
VIATPGR+ L + +FLV+DEADR+L+ G F +L + +P RQ
Sbjct: 124 VIATPGRLADHLRSSNTFS--IKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQ 181
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSAT+T L+ L L+ N+ +F+EA +TVE L Q+Y+ +P+ VKD YL+H++
Sbjct: 182 TLLFSATLTDTLRELQSLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQN 241
Query: 299 MEDMGIR-SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+D S IIF +TC++C + VALHS Q +R +AL +FKS I
Sbjct: 242 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 301
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVASRGLDIPTV +V+N++ P P+ Y + VTQ D+ L+H
Sbjct: 302 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVH 361
Query: 418 EIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
IE + K+LEEF +E EVL +T+V RR +KL
Sbjct: 362 AIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKL 399
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 190/398 (47%), Positives = 256/398 (64%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
FA LGL+ W V+ C++LG+++PTPVQ CIP ILEG+D LG A+TGSGKTAAF LPIL +
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ ++VGGMD++ QA L +PHV
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNRQ 238
VIATPGR+ L + +FLV+DEADR+L+ G F +L + +P RQ
Sbjct: 124 VIATPGRLADHLRSSNTFS--IKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQ 181
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSAT+T L+ L L+ N+ +F+EA TVE L Q+Y+ +P+ VKD YL+H++ +
Sbjct: 182 TLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQR 241
Query: 299 MEDMGIR-SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+D S IIF +TC++C VALHS Q +R +AL +FKS I
Sbjct: 242 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRI 301
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVASRGLDIPTV +V+N++ P P+ Y + VTQ D+ L+H
Sbjct: 302 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVH 361
Query: 418 EIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
IE + K+LEEF +E EVL +T+V RR +KL
Sbjct: 362 AIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKL 399
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 189/398 (47%), Positives = 256/398 (64%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
FA LGL+ W V+ C++LG+++PTPVQ CIP ILEG+D LG A+TGSGKTAAF LPIL +
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ ++VGGMD++ QA L +PHV
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNRQ 238
VIATPGR+ L + +FLV+DEADR+L+ G F +L + +P RQ
Sbjct: 124 VIATPGRLADHLRSSNTFS--IKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPTRRQ 181
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSAT+T L+ L L+ N+ +F+EA +TVE L Q+Y+ +P+ VKD YL+H++
Sbjct: 182 TLLFSATLTDTLKELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQN 241
Query: 299 MEDMGIR-SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+D S IIF +TC++C + VALHS Q +R +AL +FKS I
Sbjct: 242 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 301
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVASRGLDIPTV +V+N++ P P+ Y + VTQ D+ L+H
Sbjct: 302 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVH 361
Query: 418 EIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
IE + KQLEE +E +VL +T+V RR +KL
Sbjct: 362 AIEEQIKKQLEELSVEEAKVLQILTQVNVVRRECEIKL 399
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 189/398 (47%), Positives = 256/398 (64%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
FA L L+ W V+ C++LG+++PTPVQ CIP ILEG+D LG A+TGSGKTAAF LPIL +
Sbjct: 4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ ++VGGMD++TQA L +PHV
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRKPHV 123
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNRQ 238
VIATPGR+ L + +FLVLDEADR+L+ G F +L + +P RQ
Sbjct: 124 VIATPGRLADHLRSSNTFN--MKKIRFLVLDEADRLLEQGCTDFTADLETILSAVPARRQ 181
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSAT+T L+ L L+ N+ +F+EA +TVE L Q+Y+ +P+ VKD YL+H++
Sbjct: 182 TLLFSATLTDTLKELQGLATNQPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQT 241
Query: 299 MED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+D + S IIF +TC++C + VALHS Q +R +AL RFKS I
Sbjct: 242 FQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKSSTYRI 301
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVASRGLDIPTV +V+N++ P P+ Y + VTQ D+ L+H
Sbjct: 302 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLH 361
Query: 418 EIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
IE + +QL E +E +VL +T+V RR +KL
Sbjct: 362 AIEEEIKQQLAELAVEEAQVLQILTQVNVVRRECEIKL 399
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 183/418 (43%), Positives = 266/418 (63%)
Query: 49 PDPNSTTTDSTVT--FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQT 106
P P + D+ T F+ LG+ W Q + + ++ TPVQ CIPKILEG D+LG A+T
Sbjct: 76 PKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCART 135
Query: 107 GSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGM 166
G+GKT AFA+PIL +L+ DPYG+ AL++TPTRELA+Q+AEQF ALG + L+C V+VGG
Sbjct: 136 GTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGR 195
Query: 167 DLLTQAKSLMNRPHVVIATPGRIKVLLEEDPD-IPPVFSRTKFLVLDEADRVLDVGFEEE 225
L+ QA+ L RPHVV+ATPGR+ L+E DPD I VF + +F VLDEADR+L+ + ++
Sbjct: 196 SLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQ 255
Query: 226 LRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYE--AYEGFKTVETLKQQYIFI 283
L+ +F+ + + RQTLL SAT+T+++ L +S K YF+E + TV+ L+Q+Y+
Sbjct: 256 LKPIFESISEKRQTLLLSATITNNINMLHRVSTRKPYFFEDKGKDDESTVDRLEQKYVVC 315
Query: 284 PKNVKDVYLMHVLSKMEDMGIRSAI-IFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQ 342
P VKD YL++V+ + +S++ IF TCR C +LHS Q Q
Sbjct: 316 PVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQ 375
Query: 343 RLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXX 402
RL+AL F+S +++ TDVASRGLDIP VDLV+N+++P+ P+ Y
Sbjct: 376 RLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFG 435
Query: 403 XXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGF 460
SFVTQ DV+L+ +E V+GK+L+E + + V +T+V A++ A +KL + F
Sbjct: 436 SALSFVTQYDVELLQAVEQVIGKKLDELKVSPKHVTKYVTQVLVAKKEAELKLENQKF 493
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 187/398 (46%), Positives = 256/398 (64%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
FA +GL+ W V+ C++LG+++PTPVQ CIP ILEG+D LG A+TGSGKTAAF LPIL +
Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ ++VGGMD++ QA L +PHV
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNRQ 238
VIATPGR+ L + +FLV+DEADR+L+ G F +L + +P RQ
Sbjct: 124 VIATPGRLADHLRSSNTFN--MKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQ 181
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSAT+T L+ L L+ N+ +F+EA +TVE L Q+Y+ +P+ VKD YL+H++
Sbjct: 182 TLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQT 241
Query: 299 MED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+D + S IIF +TC++C + VALHS Q +R +AL +FKS I
Sbjct: 242 FQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 301
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVASRGLDIPTV +V+N++ P P+ Y + VTQ D+ L+H
Sbjct: 302 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLH 361
Query: 418 EIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
IE + +QL E +E EVL +T+V RR +KL
Sbjct: 362 AIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKL 399
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 185/404 (45%), Positives = 257/404 (63%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL+EW +Q CK++G+ RPT VQ CIP IL+G+D +G A+TGSGKTAAF LP+L
Sbjct: 3 TFESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQ 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
+L+EDPYGV LV+TPTRELAYQ+AEQF+ LG L L+ ++VGGMD++TQ L +PH
Sbjct: 63 KLSEDPYGVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNR 237
VV+ATPGR+ + I +R +FL++DEADR+L+ G F ++L V+ +P R
Sbjct: 123 VVVATPGRLADHIRSSDTIN--LNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVPAKR 180
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
QTLLFSAT+T LQ L ++ N+ +F+E +TVE L Q++I P+ VKD YL+H++
Sbjct: 181 QTLLFSATLTDTLQQLQSIAMNRPFFWEHKSDVQTVEELDQRFILTPEKVKDAYLVHLIQ 240
Query: 298 KMEDMGIR-SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+D S IIF +TC+SC + ++LHS Q QR + L +FKS
Sbjct: 241 TFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKSNVFK 300
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
IL+ATDVA+RGLDIPTV +V+N++ P P+ Y + VTQ D+ LI
Sbjct: 301 ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLI 360
Query: 417 HEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGF 460
+ IE +L+EF +E+EVL +T+V RR +KL F
Sbjct: 361 NAIEEQNQTKLKEFPIEEKEVLKILTQVNVTRRQCEIKLESTDF 404
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 186/398 (46%), Positives = 250/398 (62%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGLA W V+ +++G+ RPTPVQ CIP IL+G+D LG A+TGSGKTAAF LP+L
Sbjct: 7 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQV 66
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ VVVGG+D++ QA L +PHV
Sbjct: 67 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHV 126
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNRQ 238
VIATPGR+ L + KFLVLDEADR+L+ G F +L V+ + +P RQ
Sbjct: 127 VIATPGRLADHLRSSNTFS--LKKLKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQ 184
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSAT+T L L L+ N+ +F+EA +TV+ L Q+Y+ +P+ VKD YL+H++
Sbjct: 185 TLLFSATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEAVKDAYLVHLIQT 244
Query: 299 MEDMGIR-SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+D S IIF TC+ C +VALHS Q QR +AL +FKS I
Sbjct: 245 FQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKI 304
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVA+RGLDIPTV +V+N++ P P+ Y + VTQ D+ L+H
Sbjct: 305 LIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQYDIHLVH 364
Query: 418 EIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
IE + +L+EF +E+ VL +T V RR ++L
Sbjct: 365 AIEEEIKLKLQEFSVEEKLVLDILTHVNVTRRECEIEL 402
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 185/392 (47%), Positives = 247/392 (63%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGLA W V+ +++G+ RPTPVQ CIP IL+G+D LG A+TGSGKTAAF LP+L
Sbjct: 4 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQV 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ VVVGG+D++ QA L +PHV
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHV 123
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG---FEEELRVVFQCLPKNRQ 238
VIATPGR+ L + KFLVLDEADR+L+ G F +L V+ + +P RQ
Sbjct: 124 VIATPGRLADHLRSSNTFS--LKKLKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQ 181
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSAT+T L L L+ N+ +F+EA +TV+ L Q+Y+ +P+ VKD YL+H++
Sbjct: 182 TLLFSATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEAVKDAYLVHLIQT 241
Query: 299 MEDMGIR-SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+D S IIF TC+ C +VALHS Q QR +AL +FKS I
Sbjct: 242 FQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKI 301
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVA+RGLDIPTV +V+N++ P P+ Y + VTQ D+ L+H
Sbjct: 302 LIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQYDIHLVH 361
Query: 418 EIEAVVGKQLEEFECKEQEVLSDITRVYKARR 449
IE + +L+EF +E+ VL +T V RR
Sbjct: 362 AIEEEIKLKLQEFSVEEKLVLDILTHVNVTRR 393
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 181/400 (45%), Positives = 255/400 (63%)
Query: 58 STVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP 117
S TF LGL W V CK+LG + P+ +Q + IP+IL+G+D++ A+TGSGKTA+FA+P
Sbjct: 2 SDKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIP 61
Query: 118 ILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMN 177
IL++L+EDPYGV A+++TPTRELA Q+ EQF A+G+ +++ C VV+GG+D +TQA L
Sbjct: 62 ILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDK 121
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP--K 235
RPH+++ATPGR+ L I F KFLVLDEADR+L FE E+ + + LP +
Sbjct: 122 RPHIIVATPGRLASHLNNGLKIALKFC--KFLVLDEADRLLGEDFELEIASILEHLPPPE 179
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHV 295
RQTLLFSATMT +L L ++ NK + +E + TV+TLKQ+YI++P KD YL+++
Sbjct: 180 KRQTLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYI 239
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
L K E SAI+FV+ C + D +V+LHSF Q RL+AL FKSG+
Sbjct: 240 LKKHEGS---SAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKV 296
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
+L+ATDVASRGLDIP V +V+NY + +DY SF+T +DV L
Sbjct: 297 KVLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSL 356
Query: 416 IHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
I IE ++ KQLE ++ + EV + AR++ + L
Sbjct: 357 IKGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHL 396
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 180/401 (44%), Positives = 255/401 (63%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+ +T+ LGL E Q C EL + P+ +Q IP L+GKDV+GLA+TGSGKT AFAL
Sbjct: 58 EQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFAL 117
Query: 117 PILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
PILH L E+P ALV+TPTRELA+Q+ EQF+ALGSG+ ++C VVVGGMD++ Q L
Sbjct: 118 PILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLA 177
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
+PH++IATPGR+ LE K+LV+DEADR+L++ FE EL + + LP+
Sbjct: 178 KKPHIIIATPGRLVDHLENMKGFN--LKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 235
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
R+T LFSATMT ++ L S E ++TVE L+Q Y+FIP KDVYL+H+L
Sbjct: 236 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHIL 295
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+++ S +IF STC + A+ LH SQ++RL+AL++FK+ +
Sbjct: 296 NELAG---NSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRS 352
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
IL++TDVASRGLDIP VD+V+N+DIP + +DY + V+Q D++L
Sbjct: 353 ILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELY 412
Query: 417 HEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMD 457
IE ++GKQL ++C+E EV++ RV +A+R A ++L D
Sbjct: 413 QRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKD 453
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 177/417 (42%), Positives = 259/417 (62%)
Query: 43 LEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLG 102
LE P + + T TF LG+ + + C +LG +PT +Q IP L+G+D++G
Sbjct: 10 LESMEAPQ-TAVEVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIG 68
Query: 103 LAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVV 162
LA+TGSGKT AFALPIL+ L E P + ALV+TPTRELA+Q++EQF+ALGS + ++C V+
Sbjct: 69 LAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVI 128
Query: 163 VGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGF 222
VGG+D ++Q+ +L +PH+VIATPGR+ LE K+LV+DEADR+L++ F
Sbjct: 129 VGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFN--LRALKYLVMDEADRILNMDF 186
Query: 223 EEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIF 282
E E+ + + +P++R+T LFSATMT +Q L + ++TVE L+Q Y+F
Sbjct: 187 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLF 246
Query: 283 IPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQ 342
IP KD YL+++L+++ S +IF STC + A+ LH SQS+
Sbjct: 247 IPSKFKDTYLVYILNELAG---NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSK 303
Query: 343 RLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXX 402
RL +L++FK+ +ILLATDVASRGLDIP VD+V+N+DIP + +DY
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 403 XXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDG 459
+FVTQ DV+L IE ++GK+L F ++ EV+ RV +A+R A M+L + G
Sbjct: 364 KAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHG 420
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 174/403 (43%), Positives = 256/403 (63%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+ T TF LG+ + + C +LG +PT +Q IP L+G+D++GLA+TGSGKT AFAL
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 117 PILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
PIL+ L E P + ALV+TPTRELA+Q++EQF+ALGS + ++C V+VGG+D ++Q+ +L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 140
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
+PH+VIATPGR+ LE K+LV+DEADR+L++ FE E+ + + +P++
Sbjct: 141 KKPHIVIATPGRLIDHLENTKGFN--LRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
R+T LFSATMT +Q L + ++TVE L+Q Y+FIP KD YL+++L
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYIL 258
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+++ S +IF STC + A+ LH SQS+RL +L++FK+ +
Sbjct: 259 NELAG---NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARS 315
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
ILLATDVASRGLDIP VD+V+N+DIP + +DY +FVTQ DV+L
Sbjct: 316 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELF 375
Query: 417 HEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDG 459
IE ++GK+L F +++EV+ RV +A+R A M+L + G
Sbjct: 376 QRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHG 418
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 174/403 (43%), Positives = 256/403 (63%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+ T TF LG+ + + C +LG +PT +Q IP L+G+D++GLA+TGSGKT AFAL
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 117 PILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
PIL+ L E P + ALV+TPTRELA+Q++EQF+ALGS + ++C V+VGG+D ++Q+ +L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 140
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
+PH+VIATPGR+ LE K+LV+DEADR+L++ FE E+ + + +P++
Sbjct: 141 KKPHIVIATPGRLIDHLENTKGFN--LRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
R+T LFSATMT +Q L + ++TVE L+Q Y+FIP KD YL+++L
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYIL 258
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+++ S +IF STC + A+ LH SQS+RL +L++FK+ +
Sbjct: 259 NELAG---NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARS 315
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
ILLATDVASRGLDIP VD+V+N+DIP + +DY +FVTQ DV+L
Sbjct: 316 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELF 375
Query: 417 HEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDG 459
IE ++GK+L F +++EV+ RV +A+R A M+L + G
Sbjct: 376 QRIEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMELREHG 418
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 175/411 (42%), Positives = 257/411 (62%)
Query: 49 PDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGS 108
P P + + T TF LG+ + + C +LG +PT +Q IP L+G+D++GLA+TGS
Sbjct: 40 PQP-AVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGS 98
Query: 109 GKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 168
GKT AFALPIL+ L E P + ALV+TPTRELA+Q++EQF+ALGS + ++ V+VGG+D
Sbjct: 99 GKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 158
Query: 169 LTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRV 228
++Q+ +L +PH+VIATPGR+ LE K+LV+DEADR+L++ FE E+
Sbjct: 159 MSQSLALAKKPHIVIATPGRLIDHLENTKGFN--LRALKYLVMDEADRILNMDFETEVDK 216
Query: 229 VFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVK 288
+ + +P++R+T LFSATMT +Q L + ++TVE L+Q Y+FIP K
Sbjct: 217 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFK 276
Query: 289 DVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALH 348
D YL+++L+++ S +IF STC + A+ LH SQS+RL +L+
Sbjct: 277 DTYLVYILNELAG---NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 333
Query: 349 RFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFV 408
+FK+ +ILLATDVASRGLDIP VD+V+N+DIP + +DY +FV
Sbjct: 334 KFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFV 393
Query: 409 TQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDG 459
TQ DV+L IE ++GK+L F ++ EV+ RV +A+R A M+L + G
Sbjct: 394 TQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHG 444
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 173/403 (42%), Positives = 254/403 (63%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+ T TF LG+ + + C +LG +PT +Q IP L+G+D++GLA+TGSGKT AFAL
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 117 PILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
PIL+ L E P + ALV+TPTRELA+Q++EQF+ALGS + ++ V+VGG+D ++Q+ +L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 140
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
+PH++IATPGR+ LE K+LV+DEADR+L++ FE E+ + + +P++
Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFN--LRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
R+T LFSATMT +Q L + ++TVE L+Q YIFIP KD YL+++L
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYIL 258
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+++ S +IF STC + A+ LH SQS+RL +L++FK+ +
Sbjct: 259 NELAG---NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARS 315
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
ILLATDVASRGLDIP VD+V+N+DIP + +DY +FVTQ DV+L
Sbjct: 316 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELF 375
Query: 417 HEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDG 459
IE ++GK+L F ++ EV+ RV +A+R A M+L + G
Sbjct: 376 QRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHG 418
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 171/399 (42%), Positives = 251/399 (62%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F LG+ + + C +LG + PT +Q IP L+G+D++GLA+TGSGKT AFALPIL
Sbjct: 26 SFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPILQ 85
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
L + P + ALV+TPTRELA+Q++EQF+ALGS + + V+VGG+D ++Q+ +L +PH
Sbjct: 86 ALLDAPQRLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKPH 145
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
++IATPGR+ LE KFLV+DEADR+L++ FE E+ + + +P++R+T
Sbjct: 146 IIIATPGRLVDHLENTKGFN--LRALKFLVMDEADRILNMDFETEVDKILKVIPRDRKTF 203
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATMT +Q L + ++TVE L+Q YIFIP KD YL+++L+++
Sbjct: 204 LFSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDSYLVYILNELA 263
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLA 360
S +IF STC + A+ LH SQ++RL +L++FK+ +ILLA
Sbjct: 264 G---NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLA 320
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIE 420
TDVASRGLDIP VD+V+N+DIP + +DY +FVTQ DV+L IE
Sbjct: 321 TDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIE 380
Query: 421 AVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDG 459
++GK+L F +E+EV+ RV +A+R A M+L + G
Sbjct: 381 HLIGKKLPAFPMQEEEVMMLTERVAEAQRFARMELREQG 419
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 170/400 (42%), Positives = 244/400 (61%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+FA LG+++ C+ LG +P+ +Q +P L+GKDV+GLA+TGSGKT AFA+P+L
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
L + P LV+TPTRELA+Q+ +QF+ALGSG+ L V+VGG+D+ QA +L RPH
Sbjct: 105 SLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPH 164
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ATPGR+ LE KFL++DEADR+L++ FE EL + + +P+ R+T
Sbjct: 165 IIVATPGRLVDHLENTKGFN--LKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTY 222
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATMT + L S +KTV+ LKQ YIF+P K+ YL+++L+ E
Sbjct: 223 LFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLN--E 280
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLA 360
G SAI+F +TC + +AV LH SQ +RL +L++FKS IL+
Sbjct: 281 HAG-NSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVC 339
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIE 420
TDVA+RGLDIP VD+V+NYD+P +DY + VTQ DV+ +IE
Sbjct: 340 TDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIE 399
Query: 421 AVVGKQLEEFECKEQEVLSDITRVYKARRVAT--MKLMDD 458
A +GK+L+E++C E EV+ + R +A A MK MD+
Sbjct: 400 ANLGKKLDEYKCVENEVMVLVERTQEATENARIEMKEMDE 439
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 169/404 (41%), Positives = 249/404 (61%)
Query: 54 TTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAA 113
TT + +F LG+ E + C +LG ++PT +Q IP L+G+DV+GLA+TGSGKT A
Sbjct: 73 TTGEIHTSFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGA 132
Query: 114 FALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
FA+P+L L + LV+TPTRELA+Q+AEQF ALGS + ++ V+VGG+D+++QA
Sbjct: 133 FAVPVLQSLLACAQRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQAL 192
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L +PHVVIATPGR+ +E K+LV+DEADR+L++ FE E+ + + +
Sbjct: 193 VLAKKPHVVIATPGRLIDHMENTKGFN--LRALKYLVMDEADRILNMDFESEVDKILKVI 250
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
P++R+T LFSATMT +Q L + + TV+ L+Q YIFIP KD YL+
Sbjct: 251 PRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCYLV 310
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
+L+++ S ++F TC + A+ LH SQ++RL AL++FKS
Sbjct: 311 SILNELAG---NSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSK 367
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
++LLATDVASRGLDIP VD V+N+DIP + +DY +FVTQ DV
Sbjct: 368 SRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDV 427
Query: 414 DLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMD 457
+L IEA++GK+L F +E+EV+ + RV +A+R A +++ +
Sbjct: 428 ELFQRIEALIGKKLPAFPTQEEEVMMLVERVSEAQRFARIEMKE 471
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 170/450 (37%), Positives = 256/450 (56%)
Query: 16 KPKSKTRSKXXXXXXXXXXSKNAKTTQLEKFTNPDPNSTTTDS-----TVTFAGLGLAEW 70
K + K K K + ++E+F N + + VTF LG+
Sbjct: 70 KKEIKKEIKNEELDEDSLLEKEEEEKEIEEFINNTNQKKSEEEEKKYENVTFESLGVHPQ 129
Query: 71 AVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVL 130
+ C +LG +P +Q IP L+G+D++GLAQTGSGKTAAF +P+L +L E P G+
Sbjct: 130 IIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQGLF 189
Query: 131 ALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIK 190
L + PTRELAYQ+A+QF A+GS + ++ V+VGG+D ++Q+ +L +PHVV+ +PGR+
Sbjct: 190 CLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVVGSPGRVL 249
Query: 191 VLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDL 250
LE K+ ++DEADR+ FEEE+ + + +PK R T LFSATMTS +
Sbjct: 250 HHLEHTKGFN--LRSIKYFIMDEADRLFSADFEEEVNNILKVIPKERNTYLFSATMTSKV 307
Query: 251 QTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIF 310
L S + ++TV+TL QQY+F+P KD YL ++L+++ IIF
Sbjct: 308 AKLQRASLVNPVKVQVASKYQTVDTLLQQYLFVPFKYKDCYLAYILNELAG---NLTIIF 364
Query: 311 VSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDI 370
STC S A+ ++ Q +RL++L++FK G +IL+ATDVA+RGLDI
Sbjct: 365 TSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILVATDVAARGLDI 424
Query: 371 PTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEF 430
P+VDLV+NYD+P ++Y + VTQ DV++ IE V+ K+L+ F
Sbjct: 425 PSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVTQYDVEMYQRIEFVLKKKLDSF 484
Query: 431 ECKEQEVLSDITRVYKARRVATMKLMDDGF 460
C+E+ VL + RV +A R+AT +L D +
Sbjct: 485 PCQEETVLIFLERVQEAHRIATNELKDKNY 514
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 176/409 (43%), Positives = 256/409 (62%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F+ LG++ W + T K L + PT +Q I +ILEG++ +G A+TGSGKTAAFALPI+
Sbjct: 8 SFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIE 67
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
+ ++DP G+ AL++TPTRELA Q+ EQF ALG+ L+L+ ++VGGMD++ Q+ L RPH
Sbjct: 68 KWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPH 127
Query: 181 VVIATPGRIKVLLEEDPDIPPV-FSRTKFLVLDEADRVLDVGFEEELRVVFQCLP--KNR 237
VV+ATPGR+ L+ + + R KFLV+DEADR+L F ++L F LP ++R
Sbjct: 128 VVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDR 187
Query: 238 QTLLFSATMTSDLQTLL--ELSANKA--YFYEAY-EGFKTVETLKQQYIFIPKNVKDVYL 292
QTLLF+AT+T ++ L NK + YE + TL+Q YIF+ V++ YL
Sbjct: 188 QTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYIFVSSQVREAYL 247
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+H+L+ E+ +SAIIFV+ R+ + LHS Q +R+++L RF++
Sbjct: 248 VHLLTIPENAK-KSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRA 306
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
A IL+ATDVASRGLDIP+V LV+N+D+PR P DY S VT+ D
Sbjct: 307 EAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERD 366
Query: 413 VDLIHEIEAVVGKQLEEFE-CKEQEVLSDITRVYKARRVATMKLMDDGF 460
VDL+H IE VG +L E+E E ++L I V A+R A+++++D GF
Sbjct: 367 VDLVHAIEDRVGTKLSEYEHVSENKMLEYIKEVTDAKRQASLEMIDRGF 415
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 170/440 (38%), Positives = 255/440 (57%)
Query: 18 KSKTRSKXXXXXXXXXXSKNAKTTQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKE 77
K T K + N+ + + + N D S ++ TF LG+ + + C++
Sbjct: 6 KKLTEDKKNSSLNKKIETSNSSSEKSSENNNGD--SQNNEAPKTFKELGVIDELCEACEK 63
Query: 78 LGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPT 137
LG + PTP+Q IP +L +DV+GLAQTGSGKTAAFALP++ L +P A+V+ PT
Sbjct: 64 LGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPT 123
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELAYQ++EQF+A+G + +R V+VGGMD++TQA +L +PHV++ TPGR+ LE
Sbjct: 124 RELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTK 183
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELS 257
K+L++DEADR+LD+ F + + + +P R+TLLFSATMTS ++ L S
Sbjct: 184 GFS--LKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRAS 241
Query: 258 ANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSC 317
++ F TV+TL Q+Y+F P KD YL+++++++ S IIF T
Sbjct: 242 LHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAG---NSIIIFARTVNDT 298
Query: 318 HXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVL 377
A+ LH SQS RL AL++FKSG + L+ATDVA+RGLDIP VD+V+
Sbjct: 299 QRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVI 358
Query: 378 NYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEV 437
NYDIP + Y + VTQ D++ IEA +GK+++E+E ++ V
Sbjct: 359 NYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQEYEIDKEGV 418
Query: 438 LSDITRVYKARRVATMKLMD 457
RV +A+R A +++ +
Sbjct: 419 FLLSERVGEAQREAIIQMKE 438
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 171/411 (41%), Positives = 246/411 (59%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TFA LG+ E V+ C+ LG + P+ +Q +P LEGKDV+GLAQTGSGKT AFA+PIL
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 121 RLAEDPY------------GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 168
L E Y A V++PTRELA Q+AEQF+ALG+ + LRC V+VGG+D
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 169 LTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRV 228
+ Q +L RPHV++ATPGR+ + + K+LVLDEADR+L+ FE+ L
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFS--LKSLKYLVLDEADRLLNEDFEKSLNQ 187
Query: 229 VFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVK 288
+ + +P R+T LFSATMT ++ L EA + TV+TLKQQY F+ K
Sbjct: 188 ILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYK 247
Query: 289 DVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALH 348
D YL+++LS+M + +++IF TC A+ + +QS+RL AL+
Sbjct: 248 DCYLVYILSEMPES---TSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALN 304
Query: 349 RFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFV 408
+FK+G+ IL+ TDVASRGLDIP+VD+V+NYDIP +DY S V
Sbjct: 305 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 364
Query: 409 TQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDG 459
Q +++ +IE ++GK+L E+ +E EVLS + RV +A++++ M + + G
Sbjct: 365 NQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESG 415
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 167/400 (41%), Positives = 243/400 (60%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F LG+ + + C+ +G + PTP+Q+ IP LEG+DV+GLA+TGSGKTAAFALP+L
Sbjct: 47 SFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQ 106
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
L E P + LV+ PTRELAYQ+++ F+ LGS + +RC V+VGGMD++ Q+ +L +PH
Sbjct: 107 ALMEAPQTLFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPH 166
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ATPGR+ LE K+L +DEADR+LD+ F E L + + LP+ R T
Sbjct: 167 IIVATPGRLLDHLENTKGFS--LRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHTY 224
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM++ +++L S + ++TV TL+ YI IP K++YL+++L+ E
Sbjct: 225 LFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKNLYLVYLLN--E 282
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLA 360
G +SAIIF +T A+ LH SQS RL AL +F+S IL+A
Sbjct: 283 FAG-QSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSRDILVA 341
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIE 420
TDVA+RGLDIP+VD+V N+D+P + Y SFVTQ DV++ IE
Sbjct: 342 TDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYDVEVWLRIE 401
Query: 421 AVVGKQLEEFECKEQEVLSDITRVYKARRVAT--MKLMDD 458
+ K+L E++ ++ EV+ RV +A R AT MK D+
Sbjct: 402 HALSKKLPEYQVEKDEVMVMSERVAEASRQATIEMKSFDE 441
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 151/332 (45%), Positives = 220/332 (66%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+ T TF LG+ + + C +LG +PT +Q IP L+G+D++GLA+TGSGKT AFAL
Sbjct: 20 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 79
Query: 117 PILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
PIL+ L E P + ALV+TPTRELA+Q++EQF+ALGS + ++C V+VGG+D ++Q+ +L
Sbjct: 80 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 139
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
+PH+VIATPGR+ LE K+LV+DEADR+L++ FE E+ + + +P++
Sbjct: 140 KKPHIVIATPGRLIDHLENTKGFN--LRALKYLVMDEADRILNMDFETEVDKILKVIPRD 197
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
R+T LFSATMT +Q L + ++TVE L+Q Y+FIP KD YL+++L
Sbjct: 198 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYIL 257
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+++ S +IF STC + A+ LH SQS+RL +L++FK+ +
Sbjct: 258 NELAG---NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARS 314
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
ILLATDVASRGLDIP VD+V+N+DIP + +DY
Sbjct: 315 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDY 346
>SGD|S000001212 [details] [associations]
symbol:DBP8 "ATPase, putative RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001212 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:U00027 GO:GO:0030686
GO:GO:0004004 GO:GO:0000447 GO:GO:0000472 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
OrthoDB:EOG4PP1RW PIR:S48908 RefSeq:NP_012039.1
ProteinModelPortal:P38719 SMR:P38719 DIP:DIP-5628N IntAct:P38719
MINT:MINT-485349 STRING:P38719 PaxDb:P38719 PeptideAtlas:P38719
EnsemblFungi:YHR169W GeneID:856574 KEGG:sce:YHR169W CYGD:YHR169w
GeneTree:ENSGT00700000105515 OMA:FRNLCAI NextBio:982426
Genevestigator:P38719 GermOnline:YHR169W GO:GO:0000480
Uniprot:P38719
Length = 431
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 167/410 (40%), Positives = 242/410 (59%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL++W ++ + + + +PT +Q CIPKILEG+D +G A+TGSGKT AFA P+L +
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
+EDP G+ +V+TPTRELA Q+AEQF ALGS +++R V+VGG ++ QA L +PH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 182 VIATPGRIKV-LLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN--RQ 238
+IATPGR+ ++ D R K+LVLDEAD +L F + L LP RQ
Sbjct: 124 IIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKRQ 183
Query: 239 TLLFSATMTSDLQTLLELSANK------AYFYEAYEGFKTVETLKQQYIFIPKNVKDVYL 292
TLLF+AT+T +++L K AY E+ + TLK +YI +P++VK+ YL
Sbjct: 184 TLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEHVKEAYL 243
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+L+ E+ ++AIIFV+ + + +LHS Q +R ++LHRF++
Sbjct: 244 YQLLT-CEEYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSLHRFRA 302
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
A IL+ATDVASRGLDIPTV+LV+NYDIP P + SFVTQ D
Sbjct: 303 NAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFVTQRD 362
Query: 413 VDLIHEIEAVVGKQLEEF-ECKEQEVLSD-ITRVYKARRVATMKLMDDGF 460
V I IE + K++ E + + V+ +T+V KA+R + M + + F
Sbjct: 363 VSRIQAIEDRINKKMTETNKVHDTAVIRKALTKVTKAKRESLMAMQKENF 412
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 170/419 (40%), Positives = 241/419 (57%)
Query: 35 SKNAKTTQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKI 94
S ++ TT T DP++ T F L L +++ + + +PTP+Q+ IP
Sbjct: 101 SSSSSTTS-SSITTIDPDAELKFKT--FKELNLVPDLLESIESMKFTKPTPIQSEAIPHA 157
Query: 95 LEGKDVLGLAQTGSGKTAAFALPILHRL--AEDPYGVLALVITPTRELAYQLAEQFKALG 152
LEGKD++GLAQTGSGKTAAFA+PIL L A+ PY ALV+ PTREL +Q+ + F ALG
Sbjct: 158 LEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPY--FALVLAPTRELTFQIKDTFDALG 215
Query: 153 SGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLD 212
S + LR +VGGMD++ QA+ LM +PHV++ATPGRI LE K+LV+D
Sbjct: 216 SSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFS--LKNLKYLVMD 273
Query: 213 EADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKT 272
EADR+LD+ F L + + +P R T LFSATMT+ ++ L S + ++T
Sbjct: 274 EADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 333
Query: 273 VETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAV 332
+ L Q + + K+ L+H+L+ E MG +S I+F T AV
Sbjct: 334 ADNLVQSMMLVNDGYKNTILIHLLN--EFMG-KSIIVFTRTVAHAQRTALLARILGFNAV 390
Query: 333 ALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXX 392
LH SQSQRL +L++FKS QA IL+ATDVA+RGLDIP+VD+V+NYDIP + Y
Sbjct: 391 PLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRV 450
Query: 393 XXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVA 451
S +TQ D+++ IE+V+GK+L + + +EVL D V+ + A
Sbjct: 451 GRTARAGRSGKSISLITQYDLEMYLRIESVLGKKLPKEDKPPKEVL-DALHVHVDKATA 508
>UNIPROTKB|F1N0P2 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:DAAA02019036 IPI:IPI00709252
UniGene:Bt.61505 Ensembl:ENSBTAT00000056136 OMA:PLEPKEY
Uniprot:F1N0P2
Length = 392
Score = 382 (139.5 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 81/201 (40%), Positives = 117/201 (58%)
Query: 256 LSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR-SAIIFVSTC 314
L+ N+ +F+EA +TVE L Q+Y+ +P+ VKD YL+H++ +D S IIF +TC
Sbjct: 108 LATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTC 167
Query: 315 RSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVD 374
++C + VALHS Q +R +AL +FKS IL+ATDVASRGLDIPTV
Sbjct: 168 KTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQ 227
Query: 375 LVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKE 434
+V+N++ P P+ Y + VTQ D+ L+H IE + K+LEEF +E
Sbjct: 228 VVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFPVEE 287
Query: 435 QEVLSDITRVYKARRVATMKL 455
+VL +T+V RR +KL
Sbjct: 288 AQVLQILTQVNVVRRECEIKL 308
Score = 367 (134.2 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 66/105 (62%), Positives = 86/105 (81%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
FA LGL+ W V+ C+++G+++PTPVQ CIP ILEG+D LG A+TGSGKTAAF LPIL +
Sbjct: 4 FAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGM 166
L+EDPYG+ LV+TPTRELAYQ+AEQF+ LG L L+ ++VGG+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGL 108
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 163/412 (39%), Positives = 243/412 (58%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F LG+A+W ++ + + PT +Q+ CIP IL+G D +G A+TGSGKT AFA P+L
Sbjct: 1 MSFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPML 60
Query: 120 HRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRP 179
+ +EDP+G+ L++TPTRELA Q+AEQF ALG+ ++++ VVVGG D + Q +L +P
Sbjct: 61 TQWSEDPFGIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKP 120
Query: 180 HVVIATPGRIKV-LLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN-- 236
H VIATPGR+ +L + R K+LVLDEADR+L F +L+ F LP +
Sbjct: 121 HFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVLPTSDK 180
Query: 237 RQTLLFSATMTSDLQTLLEL--SANK--AYFYEAYEGFKTV--ETLKQQYIFIPKNVKDV 290
RQTLLF+AT+T ++ L E + K + +E K TL+ Y+F+P VK+
Sbjct: 181 RQTLLFTATITDAVRALKEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPSYVKEA 240
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
YL +L +E +A+IFV+ + D +LHS QS+R ++LHRF
Sbjct: 241 YLNSILH-LEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNSLHRF 299
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
K+G A IL+ATDVASRGLDIPTV+LV+N+DIP P D+ S + +
Sbjct: 300 KAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDAVSIIGE 359
Query: 411 NDVDLIHEIEAVVGKQLEEFE-CKEQEVLSD-ITRVYKARRVATMKLMDDGF 460
D+D I IE + K++E E + V+ + ++ A+R + M++ + F
Sbjct: 360 KDIDRIQSIEERINKKMELLEDVNDDNVIKESLSATSVAKRESLMEMDKENF 411
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 170/422 (40%), Positives = 247/422 (58%)
Query: 35 SKNAKTTQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKI 94
SK+ +TQ E TN D +S +F+ L L +Q CK L +PTP+Q+ IP
Sbjct: 63 SKSTVSTQNEN-TNED------ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPA 115
Query: 95 LEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSG 154
LEG D++GLAQTGSGKTAAFA+PIL+RL D A ++ PTRELA Q+ E F +LGS
Sbjct: 116 LEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSL 175
Query: 155 LHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEA 214
+ +R +VGGM+++ QA+ LM +PH++IATPGR+ LE + KFLV+DEA
Sbjct: 176 MGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFS--LRKLKFLVMDEA 233
Query: 215 DRVLDVGFEEELRVVFQCLP-KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV 273
DR+LD+ F L + + +P + R T LFSATMTS + L S ++TV
Sbjct: 234 DRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTV 293
Query: 274 ETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVA 333
+TL Q + +P +K+ YL+++L+ E +G ++ IIF T + + A A
Sbjct: 294 DTLVQTLMVVPGGLKNTYLIYLLN--EFIG-KTMIIFTRTKANAERLSGLCNLLEFSATA 350
Query: 334 LHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXX 393
LH +Q+QR+ +L FK+G+ +IL+ATDVA+RGLDIP+VD+V+NYDIP + Y
Sbjct: 351 LHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVG 410
Query: 394 XXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATM 453
S V+Q D++LI IE V+GK+L + + +L+ V KA M
Sbjct: 411 RTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVM 470
Query: 454 KL 455
++
Sbjct: 471 EM 472
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 159/402 (39%), Positives = 232/402 (57%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL W V+ +LG++ TP+Q CIP IL G+D +G A+TGSGKT AFALPIL R
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
L+E+P ALV+TPT ELAYQ++EQF G + +R VV GG D + +++ LM RPH+
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 241
V+A PGR+ L F K+LV+DEADR+L+ F+E L ++ +CLPK RQ L
Sbjct: 129 VVAMPGRLADHLTGCDTFS--FDNLKYLVVDEADRMLNGDFDESLSIIERCLPKTRQNLF 186
Query: 242 FSATMTSDL-QTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM- 299
FSATM + ++ + A+ + + TVETL Q+Y+ +D+ L+ L K
Sbjct: 187 FSATMKDFIKESSIFPIASDCFEWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYR 246
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
E+ + +IF +T + C + + V LH F Q +R++AL RFKS Q L+
Sbjct: 247 EENENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLI 306
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXS-FVTQNDVDLIHE 418
ATDVA+RGLDIP+V+LV+N+ +PR P++Y S F D++L+
Sbjct: 307 ATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAA 366
Query: 419 IEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGF 460
IE + +L E ++ V +V RR + M+L ++ F
Sbjct: 367 IEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDF 408
>ASPGD|ASPL0000072637 [details] [associations]
symbol:AN4903 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BN001303 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000084 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 RefSeq:XP_662507.1 ProteinModelPortal:Q5B3H7
EnsemblFungi:CADANIAT00005498 GeneID:2872706 KEGG:ani:AN4903.2
HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW Uniprot:Q5B3H7
Length = 525
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 150/383 (39%), Positives = 222/383 (57%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F L +A W V + + +R+PT +Q CIP+IL+G+D +G ++TGSGKT AF++PIL
Sbjct: 96 SFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQ 155
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
+ AEDP+G+ A+++TPTRELA Q+ EQ KA+ + ++ ++ GG D+ +QA L RPH
Sbjct: 156 KWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQAIELAGRPH 215
Query: 181 VVIATPGRIKVLLEED-PDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL-----P 234
VV+ATPGR+ + D R + +VLDEADR+L G L V CL P
Sbjct: 216 VVVATPGRLADHINTSGTDTVAGLKRVRMVVLDEADRLLSPGPGSMLPDVETCLSFLPGP 275
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKA----YFYE-AYEGFKTVE-TLKQQYIFIPKNVK 288
RQTLLF+AT+T +++ L + + E + E TV TL+ Y+ +P +
Sbjct: 276 SQRQTLLFTATLTPEVRALKSMPQTPGKPPIFVTEISTEAKDTVPPTLRTTYVQVPLTHR 335
Query: 289 DVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALH 348
+ +L HVL E +SAI+F +T +S +LHS QS+R S L
Sbjct: 336 EAFL-HVLLSTESNITKSAIVFTNTTKSADLLERLLRSLGHRVTSLHSLLPQSERNSNLA 394
Query: 349 RFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFV 408
RF++ A +L+ATDVASRGLDIP+V LV+N+++PR P DY + V
Sbjct: 395 RFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHRVGRTARAGRTGEAVTLV 454
Query: 409 TQNDVDLIHEIEAVVGKQLEEFE 431
Q DV L+ IE +G+++ E+E
Sbjct: 455 GQRDVQLVLAIEERIGRKMVEYE 477
>GENEDB_PFALCIPARUM|PFB0860c [details] [associations]
symbol:PFB0860c "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AE001362
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802 HSSP:P10081
KO:K14777 PIR:C71604 RefSeq:XP_001349688.1
ProteinModelPortal:O96264 EnsemblProtists:PFB0860c:mRNA
GeneID:812770 KEGG:pfa:PFB0860c EuPathDB:PlasmoDB:PF3D7_0218400
OMA:KHRAKRV ProtClustDB:CLSZ2432676 Uniprot:O96264
Length = 562
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 138/408 (33%), Positives = 221/408 (54%)
Query: 52 NSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKT 111
N VTF L + E +++ KELG ++PT +Q +P KD++GL++TGSGKT
Sbjct: 148 NEEREKQNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKT 207
Query: 112 AAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQ 171
A F +PIL L + ALVI+PTREL Q+++ F+ALG L + + GG+D++TQ
Sbjct: 208 ACFIIPILQDLKVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQ 267
Query: 172 AKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQ 231
+ +L +P+V+++TPGRI L K+LV DEAD++L FE + +
Sbjct: 268 SLNLAKKPNVIVSTPGRILDHLNNTKGFN--LKNLKYLVFDEADKLLSQDFESSINKLLL 325
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP NR T LFSATMT ++ L + E + TV TL + YIF+P K Y
Sbjct: 326 ILPPNRITFLFSATMTKNVAKLKKACLKNPVKVEVSNKYSTVSTLIETYIFLPLKYKYTY 385
Query: 292 LMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L + + R+ IIF +TC + +++ LH +Q+QRLS+L+ FK
Sbjct: 386 LSSLCFHYQT---RNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNSFK 442
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
+ IL++T V +RGLD+ + +V+N+DI ++Y +FVTQ
Sbjct: 443 VNKYNILISTQVGARGLDLQDIKIVINFDICSC-KEYIHRVGRTARAGRSGKSITFVTQY 501
Query: 412 DVDLIHEIEAVVGKQLEEF-ECKEQEVLSDITRVYKARRVATMKLMDD 458
DV+ IE + K++++F + E +VL + +A R++ +++ ++
Sbjct: 502 DVENFLAIEKQLNKKIDKFTDLDENDVLLYHEQTIEALRLSEIEMKEN 549
>UNIPROTKB|O96264 [details] [associations]
symbol:PFB0860c "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 HSSP:P10081 KO:K14777 PIR:C71604
RefSeq:XP_001349688.1 ProteinModelPortal:O96264
EnsemblProtists:PFB0860c:mRNA GeneID:812770 KEGG:pfa:PFB0860c
EuPathDB:PlasmoDB:PF3D7_0218400 OMA:KHRAKRV ProtClustDB:CLSZ2432676
Uniprot:O96264
Length = 562
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 138/408 (33%), Positives = 221/408 (54%)
Query: 52 NSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKT 111
N VTF L + E +++ KELG ++PT +Q +P KD++GL++TGSGKT
Sbjct: 148 NEEREKQNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKT 207
Query: 112 AAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQ 171
A F +PIL L + ALVI+PTREL Q+++ F+ALG L + + GG+D++TQ
Sbjct: 208 ACFIIPILQDLKVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQ 267
Query: 172 AKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQ 231
+ +L +P+V+++TPGRI L K+LV DEAD++L FE + +
Sbjct: 268 SLNLAKKPNVIVSTPGRILDHLNNTKGFN--LKNLKYLVFDEADKLLSQDFESSINKLLL 325
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP NR T LFSATMT ++ L + E + TV TL + YIF+P K Y
Sbjct: 326 ILPPNRITFLFSATMTKNVAKLKKACLKNPVKVEVSNKYSTVSTLIETYIFLPLKYKYTY 385
Query: 292 LMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L + + R+ IIF +TC + +++ LH +Q+QRLS+L+ FK
Sbjct: 386 LSSLCFHYQT---RNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNSFK 442
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
+ IL++T V +RGLD+ + +V+N+DI ++Y +FVTQ
Sbjct: 443 VNKYNILISTQVGARGLDLQDIKIVINFDICSC-KEYIHRVGRTARAGRSGKSITFVTQY 501
Query: 412 DVDLIHEIEAVVGKQLEEF-ECKEQEVLSDITRVYKARRVATMKLMDD 458
DV+ IE + K++++F + E +VL + +A R++ +++ ++
Sbjct: 502 DVENFLAIEKQLNKKIDKFTDLDENDVLLYHEQTIEALRLSEIEMKEN 549
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 132/371 (35%), Positives = 200/371 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL + + + G PTP+Q IP +++G+D++GLAQTG+GKT AFA PIL R
Sbjct: 9 FQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDR 68
Query: 122 LAED----PY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
L+ + P G LV+ PTRELA Q+A F G+GL+LR +V GG + Q + L
Sbjct: 69 LSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLE 128
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
H+++ATPGR+ L+E+ + + L+LDEAD++LD+GF LR + + +P
Sbjct: 129 RGAHILVATPGRLIDLMEQRA---VSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSK 185
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
RQTL FSATM +++L T ++Q+ F+ + K L +
Sbjct: 186 RQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLL---I 242
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
K+ D +RSAI+F T D ++VA+H KSQSQR AL FK+G+
Sbjct: 243 EKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVP 302
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
IL+ATD+A+RG+ + + V+NYD+P P + SF ++++ +
Sbjct: 303 ILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTL 362
Query: 417 HEIEAVVGKQL 427
IE + G +L
Sbjct: 363 RAIEKLTGLKL 373
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 131/376 (34%), Positives = 200/376 (53%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F+ LGL+ + E G P+P+Q IP +L GKDV+ AQTG+GKTA F LP+L
Sbjct: 1 MSFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 120 HRLAEDPYG----VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
LA+ ALV+TPTRELA Q+ E + G L LR VV GG+ + Q L
Sbjct: 61 ELLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKL 120
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
+ V++ATPGR+ L++++ F++ + LVLDEADR+LD+GF +++ + LP
Sbjct: 121 RHGVDVLVATPGRLLDLVQQNA---VKFNQLEILVLDEADRMLDMGFIRDIKKILALLPA 177
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHV 295
RQ L+FSAT + +++ L + N T+KQ + K K L+ +
Sbjct: 178 KRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSALLIQL 237
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
+ K E+ + ++F T + + A A+H KSQ R AL FKSG+
Sbjct: 238 I-KQENW--QQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEV 294
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
+L+ATD+A+RGLDI + V+N+D+P P DY S V+ ++ L
Sbjct: 295 RVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKL 354
Query: 416 IHEIEAVVGKQLEEFE 431
+ +IE ++ + LE E
Sbjct: 355 LKDIERLINRVLERQE 370
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 141/398 (35%), Positives = 204/398 (51%)
Query: 49 PDPNSTTTDSTV----TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLA 104
P P +T D TF L L+ ++ C+ LG ++PTP+Q CIP L G+D+ A
Sbjct: 152 PKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASA 211
Query: 105 QTGSGKTAAFALPILHRLAEDPYGVLA---LVITPTRELAYQLAEQFKALGSGLHLRCEV 161
TGSGKTAAFALP L RL P V A L++TPTRELA Q+ + L ++C +
Sbjct: 212 ITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGL 271
Query: 162 VVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVG 221
+VGG+ + Q L + P +V+ATPGR+ L + L+LDEADR+L G
Sbjct: 272 IVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVD--LDDLAVLILDEADRLLQTG 329
Query: 222 FEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYI 281
F E+ + + PK RQT+LFSATMT +++ L++LS NK A + L ++ +
Sbjct: 330 FATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVV 389
Query: 282 FIPKNVKDVYLMHVLSKMEDMGIRS-AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQ 340
I + ++ VL + +S IIF T ++ H +A LH +Q
Sbjct: 390 RI-RRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQ 448
Query: 341 SQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXX 400
+QRL +L F+ + L+ATDVA+RGLDI V V+NY PR Y
Sbjct: 449 AQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGR 508
Query: 401 XXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVL 438
+FVT +D L+ I VG +L+ EQ ++
Sbjct: 509 EGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIV 546
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 128/379 (33%), Positives = 197/379 (51%)
Query: 56 TDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFA 115
+D+ F LGL+E ++ ++ G P+P+Q IP ++ G+DV+ AQTG+GKTA F
Sbjct: 2 SDTPTKFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFT 61
Query: 116 LPILHRLAEDP------YGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 169
LP+L RL+ V AL++TPTRELA Q++E + G L+L VV GG+ +
Sbjct: 62 LPLLQRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKIN 121
Query: 170 TQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVV 229
Q L V++ATPGR+ L + FS+ + +LDEADR+LD+GF +++ +
Sbjct: 122 PQIARLRQGVDVLVATPGRLLDLYNQRA---VKFSQLEVFILDEADRMLDMGFIRDIKKL 178
Query: 230 FQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKD 289
LPK+RQ LLFSAT + +++ L + N T E + Q + K K
Sbjct: 179 MTALPKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKRKP 238
Query: 290 VYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHR 349
L H++ ++ + ++F T + A A+H KSQ R AL
Sbjct: 239 AVLTHLI---KENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAA 295
Query: 350 FKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVT 409
FK G IL+ATD+A+RG+DI + V+N+D+P P DY S V
Sbjct: 296 FKDGSVKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSLVC 355
Query: 410 QNDVDLIHEIEAVVGKQLE 428
+++DL+ IE V+ + +E
Sbjct: 356 ADELDLLWGIEHVIQQHIE 374
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 138/391 (35%), Positives = 206/391 (52%)
Query: 37 NAKTTQLEKF--TNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKI 94
N +TT K +N + TF L L+ ++ ++LG +PTP+Q IP
Sbjct: 165 NKQTTDKIKVLQSNRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLA 224
Query: 95 LEGKDVLGLAQTGSGKTAAFALPILHRLA--EDPY-GVLALVITPTRELAYQLAEQFKAL 151
L GKD+L A TGSGKTAAF LP+L RL + Y + L++ PTRELA Q + L
Sbjct: 225 LNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENL 284
Query: 152 GSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVL 211
++ ++VGG+ Q L P VVIATPGR+ L I + L+L
Sbjct: 285 AQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIG--LDDLEILIL 342
Query: 212 DEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK 271
DEADR+LD+GF++E+ + + P NRQT+LFSAT+ +++TL +LS + + +
Sbjct: 343 DEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQ 402
Query: 272 TVETLKQQYIFI-PKNVKD--VYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXD 328
TL+Q+++ I P+++ D L+ + +++ + G IIF + + H D
Sbjct: 403 VTSTLEQEFVKIKPQHLSDRPAILLSLCTRVFNQG--GTIIFCRSKKEVHRLRIIFGLSD 460
Query: 329 QEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+A LH SQ QR +L +F+ GQ LLA+DVASRGLDI V V+NY++P +Y
Sbjct: 461 LKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANY 520
Query: 389 XXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
SF+T ND L+ +I
Sbjct: 521 IHRVGRTARAGMDGKSCSFITDNDRKLLKDI 551
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 127/369 (34%), Positives = 197/369 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F L E + G ++PTP+Q CIP ++ G D+LG+AQTG+GKTAAF+LPI+++
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 122 LAEDPYGVLA-----LVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
+ + A L++TPTRELA Q+ + GL L+ +VV GG+ Q S+
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
+++ATPGR+ L+E DI F + VLDEAD +LD+GF ++++ + LPK+
Sbjct: 124 LGLDILVATPGRLLDLIETG-DIN--FKALEVFVLDEADTMLDMGFFKDVQSIISKLPKS 180
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
RQTLLFSATM ++++ L E + T++ + Q + K+ K L ++L
Sbjct: 181 RQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNIL 240
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+K + +IF T A +LHS K+Q+ R AL FK
Sbjct: 241 TKAD---YEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLR 297
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
+L+ATDVA+RG+D+ + LV+NY++P PR+Y SF +ND+ +
Sbjct: 298 VLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQL 357
Query: 417 HEIEAVVGK 425
IE +G+
Sbjct: 358 TNIENSIGQ 366
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 128/372 (34%), Positives = 197/372 (52%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ ++ + +G TP+Q IP L+ KDV+G AQTG+GKTAAF +PI+
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V ALV+ PTRELA Q++E+ +G+ +R + GG D+ Q ++L PH
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
V++ TPGRI ++ +VLDEAD +L++GF E++ + +P RQTL
Sbjct: 123 VIVGTPGRI---IDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E N+ + TV ++Q Y+ + + K +L+++
Sbjct: 180 LFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKK----FDILTRLL 235
Query: 301 DMGIRS-AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H SQ++RLS L +FK G IL+
Sbjct: 236 DIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y +FVT ++ +H I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHI 355
Query: 420 EAVVGKQLEEFE 431
E +++E +
Sbjct: 356 ERTTKRKMERMK 367
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 131/374 (35%), Positives = 195/374 (52%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F LGL+ ++ E G R PTP+Q IP +LEG+D++ AQTG+GKTA F LP+L
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 120 -HRLAEDPYG-----VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
H + P+ V AL++TPTRELA Q+ E + L++R VV GG+ + Q
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L V++ATPGR+ + LE + + + LVLDEADR+LD+GF ++R V L
Sbjct: 121 KLRGGVDVLVATPGRL-LDLEHQNAVK--LDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
P RQ LLFSAT + D++ L E + E + + Q F+ K K L
Sbjct: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
H++ K + ++F T + + A+H KSQ R AL FKSG
Sbjct: 238 HMIGKGN---WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
+L+ATD+A+RGLDI + V+NY++P P DY S V ++
Sbjct: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354
Query: 414 DLIHEIEAVVGKQL 427
L+ +IE ++ K++
Sbjct: 355 KLLRDIEKLLKKEI 368
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 137/400 (34%), Positives = 214/400 (53%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F+ LGL++ VQT +LG ++PT +QT IP IL+G+D++ AQTG+GKTA+F LPIL
Sbjct: 1 MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
Query: 120 HRLAEDPYG----VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+L + V AL++ PTRELA Q+AE+ + G L+ V GG+D Q + L
Sbjct: 61 EKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
++ V++ATPGR+ L + F + +VLDEADR+LD+GF E + + CLP
Sbjct: 121 IDGVDVLVATPGRLMDLYGQRA---VYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHV 295
Q LLFSAT++ ++ L + + + + + Q I + K+ K L H+
Sbjct: 178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHL 237
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
+++ + A+IF+ T A A HS +SQ+ R L FKSG+
Sbjct: 238 INEQQ---WDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRD-YXXXXXXXXXXXXXXXXXSFVTQNDVD 414
L+AT VA+RG+DI + V+NYD+P +P D Y SFV++++
Sbjct: 295 KYLVATGVAARGIDIDQLSRVVNYDLP-FPADEYVHRIGRTGRAEAVGEAISFVSKDNFK 353
Query: 415 LIHEIEAVVGKQLEE-----FECKEQEVLSDITRVYKARR 449
+ IE+ +G +E FE K+ +S + V K +R
Sbjct: 354 NLCMIESRLGHLIERRVVEGFEPKKPVPISILNYVPKHKR 393
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 137/400 (34%), Positives = 214/400 (53%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F+ LGL++ VQT +LG ++PT +QT IP IL+G+D++ AQTG+GKTA+F LPIL
Sbjct: 1 MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
Query: 120 HRLAEDPYG----VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+L + V AL++ PTRELA Q+AE+ + G L+ V GG+D Q + L
Sbjct: 61 EKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
++ V++ATPGR+ L + F + +VLDEADR+LD+GF E + + CLP
Sbjct: 121 IDGVDVLVATPGRLMDLYGQRA---VYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHV 295
Q LLFSAT++ ++ L + + + + + Q I + K+ K L H+
Sbjct: 178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHL 237
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
+++ + A+IF+ T A A HS +SQ+ R L FKSG+
Sbjct: 238 INEQQ---WDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRD-YXXXXXXXXXXXXXXXXXSFVTQNDVD 414
L+AT VA+RG+DI + V+NYD+P +P D Y SFV++++
Sbjct: 295 KYLVATGVAARGIDIDQLSRVVNYDLP-FPADEYVHRIGRTGRAEAVGEAISFVSKDNFK 353
Query: 415 LIHEIEAVVGKQLEE-----FECKEQEVLSDITRVYKARR 449
+ IE+ +G +E FE K+ +S + V K +R
Sbjct: 354 NLCMIESRLGHLIERRVVEGFEPKKPVPISILNYVPKHKR 393
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 151/458 (32%), Positives = 229/458 (50%)
Query: 17 PKSKTRSKXXXXXXXXXXSKNAKTTQLEK--FTNPDP-NSTTTDST--VTFAGLGLAEWA 71
P+SK++SK AK QL K +N P N DS+ V F +E
Sbjct: 64 PESKSQSKKEKQKA----KDEAKLEQLTKPQVSNEVPDNDNDDDSSEDVLFENADFSEPT 119
Query: 72 VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP---ILHRLAEDPY- 127
++ KE+G + T VQ IP +L G+DVLG A+TGSGKT AF +P +L+ L P
Sbjct: 120 MKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRN 179
Query: 128 GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPG 187
G ++ITPTRELA Q+ + L C +V+GG D +A L ++++ATPG
Sbjct: 180 GTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLAKGVNLLVATPG 239
Query: 188 RIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP-KNRQTLLFSATM 246
R LL+ + VFS K LV+DEADR+L++GFE+E++ + + LP +NRQ++LFSAT
Sbjct: 240 R---LLDHLKNTQFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSATQ 296
Query: 247 TSDLQTLLELSANKAYFYEAYEGFKTVET---LKQQYIFIPKNVKDVYLMHVLSKMEDMG 303
T+ ++ L +S Y K V T L+Q Y+ + + + L L +
Sbjct: 297 TTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNVKKK 356
Query: 304 IRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDV 363
I I+F+S+C S D + LH + Q +R + F + + IL+ TDV
Sbjct: 357 I---IVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDV 413
Query: 364 ASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXX-SFVTQNDVDLIHEIEAV 422
A+RGLDIP VD ++ +D P PRDY F+T +++ + ++A
Sbjct: 414 AARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLRYLKAA 473
Query: 423 VGKQLEEFEC---KEQEVLSDITRVYKARRVATMKLMD 457
L E+E K + S +T++ K + D
Sbjct: 474 K-VPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKD 510
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 151/458 (32%), Positives = 229/458 (50%)
Query: 17 PKSKTRSKXXXXXXXXXXSKNAKTTQLEK--FTNPDP-NSTTTDST--VTFAGLGLAEWA 71
P+SK++SK AK QL K +N P N DS+ V F +E
Sbjct: 64 PESKSQSKKEKQKA----KDEAKLEQLTKPQVSNEVPDNDNDDDSSEDVLFENADFSEPT 119
Query: 72 VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP---ILHRLAEDPY- 127
++ KE+G + T VQ IP +L G+DVLG A+TGSGKT AF +P +L+ L P
Sbjct: 120 MKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRN 179
Query: 128 GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPG 187
G ++ITPTRELA Q+ + L C +V+GG D +A L ++++ATPG
Sbjct: 180 GTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLAKGVNLLVATPG 239
Query: 188 RIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP-KNRQTLLFSATM 246
R LL+ + VFS K LV+DEADR+L++GFE+E++ + + LP +NRQ++LFSAT
Sbjct: 240 R---LLDHLKNTQFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSATQ 296
Query: 247 TSDLQTLLELSANKAYFYEAYEGFKTVET---LKQQYIFIPKNVKDVYLMHVLSKMEDMG 303
T+ ++ L +S Y K V T L+Q Y+ + + + L L +
Sbjct: 297 TTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNVKKK 356
Query: 304 IRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDV 363
I I+F+S+C S D + LH + Q +R + F + + IL+ TDV
Sbjct: 357 I---IVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDV 413
Query: 364 ASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXX-SFVTQNDVDLIHEIEAV 422
A+RGLDIP VD ++ +D P PRDY F+T +++ + ++A
Sbjct: 414 AARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLRYLKAA 473
Query: 423 VGKQLEEFEC---KEQEVLSDITRVYKARRVATMKLMD 457
L E+E K + S +T++ K + D
Sbjct: 474 K-VPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKD 510
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 137/418 (32%), Positives = 209/418 (50%)
Query: 36 KNAKTTQLEKFTNP--DPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPK 93
K+ K+ + E F + D S T V+F + L+ ++ C G PTP+Q CIP
Sbjct: 122 KSKKSQENEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPV 181
Query: 94 ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLA---LVITPTRELAYQLAEQFKA 150
L GKD+ A TG+GKTAAF LPIL R+ P G LV+ PTRELA Q+ + F+
Sbjct: 182 ALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRK 241
Query: 151 LGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLV 210
L + + L + GG+DL Q +L + P VV+ATPGR+ L P S + LV
Sbjct: 242 LSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFN--LSNIEVLV 299
Query: 211 LDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGF 270
LDEADR+L+ F +++ + + +NRQTLLFSATMT ++ L +S K E
Sbjct: 300 LDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINENT 359
Query: 271 KTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQE 330
T L+Q++I I + V + + + I+FV T + C +
Sbjct: 360 DTALKLRQEFIRIRAGRETDREAMVAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLGIK 419
Query: 331 AVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXX 390
+ S +Q QR+ +L +FK + +L++TD+ASRGLDI V V+N ++P+ + Y
Sbjct: 420 VGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIH 479
Query: 391 XXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKAR 448
S V +++ L+ EI V + K++ V ++ Y+ R
Sbjct: 480 RVGRTARAGKAGRSISLVGEDERKLLKEI---VNSNADR-TLKQRLVAPEVVEAYRRR 533
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 136/392 (34%), Positives = 201/392 (51%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
+TFA L LA ++ G PTPVQ +P+ LE D+L AQTG+GKTAAF LP L
Sbjct: 1 MTFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPAL 60
Query: 120 HRLAEDPYGV----LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
RL+ P G LV+TPTRELA Q+ + + G+ + +R ++GGM Q + L
Sbjct: 61 QRLSSPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLL 120
Query: 176 MNRPHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 234
++ATPGR+ LL+ D+ SR + LVLDEADR+LD+GF +++ + P
Sbjct: 121 SAPVDFIVATPGRLVDLLDRRSLDL----SRLELLVLDEADRMLDMGFSDDVDRIAAASP 176
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNV--KDVYL 292
RQTLLF+ATM S + L + + G KT +Q + + ++ K+ L
Sbjct: 177 ATRQTLLFTATMDSAMARLAGRLLREPERIDI-AGTKTTHEHIEQRLHVADDLHHKNRLL 235
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
H+++ D +R AIIF +T R A ALH Q+ R + K
Sbjct: 236 RHLIT---DESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQ 292
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G+ +L+ATDVA+RGLD+ + V+N+D+P++ DY SF + N+
Sbjct: 293 GRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNE 352
Query: 413 VDLIHEIEAVVGKQLEEFECKEQEVLSDITRV 444
V+ + IE +G+ L E E + RV
Sbjct: 353 VNYLARIERYIGQTLPEHHIPGLEPSRPLRRV 384
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 512 (185.3 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 125/337 (37%), Positives = 187/337 (55%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S+ + +F L L+ ++ EL +PTP+Q+ IP L GKD++ AQTGSGKT
Sbjct: 123 SSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTG 182
Query: 113 AFALPILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLT 170
A+ +PI+ RL P +++TPTRELA Q+ E K L ++ L + VGG++L
Sbjct: 183 AYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQ 242
Query: 171 QAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVF 230
Q + L RP +VIATPGR+ + P + LV+DEADR+L+ GF++EL +
Sbjct: 243 QEEQLKTRPDIVIATPGRLIDHIRNSPSFS--VQDIQVLVIDEADRMLEEGFQDELTEIL 300
Query: 231 QCLPKN-RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKN--V 287
+PK+ RQTLLFSATM + +Q L++LS K L QQ++ I K +
Sbjct: 301 SLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQL 360
Query: 288 KDVYLMHVLSKMEDMGIRS-AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSA 346
K L +L G+ S ++FV+ + H + LH +Q QRL
Sbjct: 361 KPALLYQLLK-----GVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQN 415
Query: 347 LHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPR 383
+ FKS + +L+ TD+A+RGLDIP ++LV+NYD+P+
Sbjct: 416 VKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPK 452
Score = 44 (20.5 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 424 GKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
GK++ + K EV D R YK + MK+
Sbjct: 574 GKKVNSKKRKANEVRKDEGRSYKKTKTDRMKI 605
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 512 (185.3 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 125/337 (37%), Positives = 187/337 (55%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S+ + +F L L+ ++ EL +PTP+Q+ IP L GKD++ AQTGSGKT
Sbjct: 123 SSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTG 182
Query: 113 AFALPILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLT 170
A+ +PI+ RL P +++TPTRELA Q+ E K L ++ L + VGG++L
Sbjct: 183 AYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQ 242
Query: 171 QAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVF 230
Q + L RP +VIATPGR+ + P + LV+DEADR+L+ GF++EL +
Sbjct: 243 QEEQLKTRPDIVIATPGRLIDHIRNSPSFS--VQDIQVLVIDEADRMLEEGFQDELTEIL 300
Query: 231 QCLPKN-RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKN--V 287
+PK+ RQTLLFSATM + +Q L++LS K L QQ++ I K +
Sbjct: 301 SLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQL 360
Query: 288 KDVYLMHVLSKMEDMGIRS-AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSA 346
K L +L G+ S ++FV+ + H + LH +Q QRL
Sbjct: 361 KPALLYQLLK-----GVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQN 415
Query: 347 LHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPR 383
+ FKS + +L+ TD+A+RGLDIP ++LV+NYD+P+
Sbjct: 416 VKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPK 452
Score = 44 (20.5 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 424 GKQLEEFECKEQEVLSDITRVYKARRVATMKL 455
GK++ + K EV D R YK + MK+
Sbjct: 574 GKKVNSKKRKANEVRKDEGRSYKKTKTDRMKI 605
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 128/362 (35%), Positives = 197/362 (54%)
Query: 36 KNAKT-TQLEKFTNPDPNSTTTD----STVTFAGLGLAEWAVQTCKELGMRRPTPVQTHC 90
KN KT T K N D N+ + S + F L + + + KEL T +Q C
Sbjct: 119 KNDKTYTDEIKSNNSDHNNNNSKEHFYSELKFEELNICDALKKGLKELNFVTLTEIQAKC 178
Query: 91 IPKILEGKDVLGLAQTGSGKTAAFALP---ILHRLAEDPY-GVLALVITPTRELAYQLAE 146
IP L GKD+LG A+TGSGKT AF +P IL+ + P G L+I+PTREL Q+ +
Sbjct: 179 IPHFLSGKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQ 238
Query: 147 QFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT 206
K L + +++GGM + K ++ +++IATPGR+ ++ + ++
Sbjct: 239 VCKDLCKYIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEF--IYKNL 296
Query: 207 KFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEA 266
L++DEADR+L +GFEEE+ ++ + LPK RQT LFSAT T+ +++L+ LS K F E
Sbjct: 297 ICLIIDEADRLLQIGFEEEINLIIKRLPKKRQTALFSATQTTKVESLIRLSLQKPIFIEV 356
Query: 267 YEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXX 326
TVE L+Q Y + ++ + + L L K +M + ++F + C S
Sbjct: 357 TTKIATVERLQQGYALVDEDKRFLLLFTFLKK--NMS-KKIMVFFNNCMSVQFYNDLLNY 413
Query: 327 XDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPR 386
D +H K Q++RL + H F + + ILL T+VA+RGLDIP V+ ++ YD P +
Sbjct: 414 IDIPTYCIHGKKKQNKRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQYDPPDDSK 473
Query: 387 DY 388
+Y
Sbjct: 474 EY 475
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 128/362 (35%), Positives = 197/362 (54%)
Query: 36 KNAKT-TQLEKFTNPDPNSTTTD----STVTFAGLGLAEWAVQTCKELGMRRPTPVQTHC 90
KN KT T K N D N+ + S + F L + + + KEL T +Q C
Sbjct: 119 KNDKTYTDEIKSNNSDHNNNNSKEHFYSELKFEELNICDALKKGLKELNFVTLTEIQAKC 178
Query: 91 IPKILEGKDVLGLAQTGSGKTAAFALP---ILHRLAEDPY-GVLALVITPTRELAYQLAE 146
IP L GKD+LG A+TGSGKT AF +P IL+ + P G L+I+PTREL Q+ +
Sbjct: 179 IPHFLSGKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQ 238
Query: 147 QFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT 206
K L + +++GGM + K ++ +++IATPGR+ ++ + ++
Sbjct: 239 VCKDLCKYIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEF--IYKNL 296
Query: 207 KFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEA 266
L++DEADR+L +GFEEE+ ++ + LPK RQT LFSAT T+ +++L+ LS K F E
Sbjct: 297 ICLIIDEADRLLQIGFEEEINLIIKRLPKKRQTALFSATQTTKVESLIRLSLQKPIFIEV 356
Query: 267 YEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXX 326
TVE L+Q Y + ++ + + L L K +M + ++F + C S
Sbjct: 357 TTKIATVERLQQGYALVDEDKRFLLLFTFLKK--NMS-KKIMVFFNNCMSVQFYNDLLNY 413
Query: 327 XDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPR 386
D +H K Q++RL + H F + + ILL T+VA+RGLDIP V+ ++ YD P +
Sbjct: 414 IDIPTYCIHGKKKQNKRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQYDPPDDSK 473
Query: 387 DY 388
+Y
Sbjct: 474 EY 475
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 537 (194.1 bits), Expect = 1.7e-51, P = 1.7e-51
Identities = 127/343 (37%), Positives = 182/343 (53%)
Query: 44 EKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGL 103
E F +P S T +F + L+ ++ +G +PTP+Q+ IP L GKDV+G
Sbjct: 239 EFFAADEPKSDTNKGNASFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGG 298
Query: 104 AQTGSGKTAAFALPILHRLAEDPYGV---LALVITPTRELAYQLAEQFKALGSGLHLRCE 160
A TGSGKTAAF +PIL RL P V +++ PTRELA Q L S ++
Sbjct: 299 AVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILAPTRELAIQCHAVATKLASHTDIKFC 358
Query: 161 VVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDV 220
+ VGG+ L Q L RP V+IATPGR + + LVLDEADR+L+
Sbjct: 359 LAVGGLSLKVQESELRLRPDVIIATPGRFIDHMRNSASF--AVDTVEILVLDEADRMLED 416
Query: 221 GFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQY 280
GF +EL + LPK+RQT+LFSATMTS + L+ + NK KTV TL Q++
Sbjct: 417 GFADELNEILTTLPKSRQTMLFSATMTSSVDNLIRVGLNKPVRLMVDSQKKTVVTLTQEF 476
Query: 281 IFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQ 340
+ + ++ + +++ +++ IIF + H LH SQ
Sbjct: 477 VRLRPGREEKRMGYLVYLCKNLYTERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQ 536
Query: 341 SQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPR 383
QR+ ++ F+ G+ + LLATD+ASRGLDI VD V+NY+ P+
Sbjct: 537 IQRIQSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQ 579
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 139/395 (35%), Positives = 203/395 (51%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F+ LGL V+ ELG + PTP+QT IP IL GK+VL AQTG+GKTA+F LP+LHR
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 122 LAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMN 177
A+ P V ++++TPTRELA Q+ + L L + GG+D Q K L+
Sbjct: 63 FADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
+++ATPGR LL+ F LVLDEADR+LD+GF E++ + + LP+ R
Sbjct: 123 GVDLLVATPGR---LLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQR 179
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
Q LLFSAT++ ++ L + + A E + Q + K+ K L H++
Sbjct: 180 QNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHLI- 238
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ A+IF+ T A A HS +SQ+ R L FK+G+
Sbjct: 239 --KENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPF 296
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+AT V SRG+DI ++ V+NYD+P DY SFV+++D +
Sbjct: 297 LVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLC 356
Query: 418 EIEAVVG-----KQLEEFECKEQEVLSDITRVYKA 447
IE +G K +E FE K+ +S + V K+
Sbjct: 357 AIERRLGHIIERKNIEGFEPKKAVPISILDFVPKS 391
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 139/395 (35%), Positives = 203/395 (51%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F+ LGL V+ ELG + PTP+QT IP IL GK+VL AQTG+GKTA+F LP+LHR
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 122 LAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMN 177
A+ P V ++++TPTRELA Q+ + L L + GG+D Q K L+
Sbjct: 63 FADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
+++ATPGR LL+ F LVLDEADR+LD+GF E++ + + LP+ R
Sbjct: 123 GVDLLVATPGR---LLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQR 179
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
Q LLFSAT++ ++ L + + A E + Q + K+ K L H++
Sbjct: 180 QNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHLI- 238
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ A+IF+ T A A HS +SQ+ R L FK+G+
Sbjct: 239 --KENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPF 296
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+AT V SRG+DI ++ V+NYD+P DY SFV+++D +
Sbjct: 297 LVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLC 356
Query: 418 EIEAVVG-----KQLEEFECKEQEVLSDITRVYKA 447
IE +G K +E FE K+ +S + V K+
Sbjct: 357 AIERRLGHIIERKNIEGFEPKKAVPISILDFVPKS 391
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/396 (31%), Positives = 202/396 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ +Q+ + +G TP+Q IP L+GKD++G AQTG+GKTAAF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V +VI PTRELA Q+ E+ +G +R + GG D+ Q ++L PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ TPGRI L+ + +VLDEAD +L++GF E++ + +P+ QTL
Sbjct: 123 IIVGTPGRI---LDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E + + T+ ++Q Y+ + + K VL+++
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKK----FDVLTRLL 235
Query: 301 DM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H +Q++R+S L +FK G +L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y FVT + + I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355
Query: 420 EAVVGKQLEEFECKE-QEVLSDITRVYKARRVATMK 454
E ++++ + E L R+ + +T++
Sbjct: 356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIE 391
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/396 (31%), Positives = 202/396 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ +Q+ + +G TP+Q IP L+GKD++G AQTG+GKTAAF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V +VI PTRELA Q+ E+ +G +R + GG D+ Q ++L PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ TPGRI L+ + +VLDEAD +L++GF E++ + +P+ QTL
Sbjct: 123 IIVGTPGRI---LDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E + + T+ ++Q Y+ + + K VL+++
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKK----FDVLTRLL 235
Query: 301 DM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H +Q++R+S L +FK G +L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y FVT + + I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355
Query: 420 EAVVGKQLEEFECKE-QEVLSDITRVYKARRVATMK 454
E ++++ + E L R+ + +T++
Sbjct: 356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIE 391
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/396 (31%), Positives = 202/396 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ +Q+ + +G TP+Q IP L+GKD++G AQTG+GKTAAF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V +VI PTRELA Q+ E+ +G +R + GG D+ Q ++L PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ TPGRI L+ + +VLDEAD +L++GF E++ + +P+ QTL
Sbjct: 123 IIVGTPGRI---LDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E + + T+ ++Q Y+ + + K VL+++
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKK----FDVLTRLL 235
Query: 301 DM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H +Q++R+S L +FK G +L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y FVT + + I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355
Query: 420 EAVVGKQLEEFECKE-QEVLSDITRVYKARRVATMK 454
E ++++ + E L R+ + +T++
Sbjct: 356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIE 391
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/396 (31%), Positives = 202/396 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ +Q+ + +G TP+Q IP L+GKD++G AQTG+GKTAAF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V +VI PTRELA Q+ E+ +G +R + GG D+ Q ++L PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ TPGRI L+ + +VLDEAD +L++GF E++ + +P+ QTL
Sbjct: 123 IIVGTPGRI---LDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E + + T+ ++Q Y+ + + K VL+++
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKK----FDVLTRLL 235
Query: 301 DM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H +Q++R+S L +FK G +L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y FVT + + I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355
Query: 420 EAVVGKQLEEFECKE-QEVLSDITRVYKARRVATMK 454
E ++++ + E L R+ + +T++
Sbjct: 356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIE 391
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/396 (31%), Positives = 202/396 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ +Q+ + +G TP+Q IP L+GKD++G AQTG+GKTAAF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V +VI PTRELA Q+ E+ +G +R + GG D+ Q ++L PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ TPGRI L+ + +VLDEAD +L++GF E++ + +P+ QTL
Sbjct: 123 IIVGTPGRI---LDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E + + T+ ++Q Y+ + + K VL+++
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKK----FDVLTRLL 235
Query: 301 DM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H +Q++R+S L +FK G +L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y FVT + + I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355
Query: 420 EAVVGKQLEEFECKE-QEVLSDITRVYKARRVATMK 454
E ++++ + E L R+ + +T++
Sbjct: 356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIE 391
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/396 (31%), Positives = 202/396 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ +Q+ + +G TP+Q IP L+GKD++G AQTG+GKTAAF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V +VI PTRELA Q+ E+ +G +R + GG D+ Q ++L PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ TPGRI L+ + +VLDEAD +L++GF E++ + +P+ QTL
Sbjct: 123 IIVGTPGRI---LDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E + + T+ ++Q Y+ + + K VL+++
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKK----FDVLTRLL 235
Query: 301 DM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H +Q++R+S L +FK G +L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y FVT + + I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355
Query: 420 EAVVGKQLEEFECKE-QEVLSDITRVYKARRVATMK 454
E ++++ + E L R+ + +T++
Sbjct: 356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIE 391
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 122/372 (32%), Positives = 193/372 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL++ +Q+ + +G TP+Q IP L+GKD++G AQTG+GKTAAF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
++ V +VI PTRELA Q+ E+ +G +R + GG D+ Q ++L PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+++ TPGRI L+ + +VLDEAD +L++GF E++ + +P+ QTL
Sbjct: 123 IIVGTPGRI---LDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSATM ++ + E + + T+ ++Q Y+ + + K VL+++
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKK----FDVLTRLL 235
Query: 301 DM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
D+ AI+F T R A +H +Q++R+S L +FK G +L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDI V V N+DIP+ P Y FVT + + I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355
Query: 420 EAVVGKQLEEFE 431
E ++++ +
Sbjct: 356 ERTTKRKMDRMD 367
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/341 (37%), Positives = 190/341 (55%)
Query: 56 TDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFA 115
+ S +FA LG+ ELG PTPVQ IP +L G+DVL A TGSGKTAAFA
Sbjct: 5 SSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFA 64
Query: 116 LPILHRLAE-----DPYGVL-ALVITPTRELAYQLAEQFKALGSGLHLRCEVVV--GGMD 167
LP+L RL+E GV+ LV+ PTRELA Q+A+ F + S + + ++V GG+
Sbjct: 65 LPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVS 124
Query: 168 LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR 227
+ Q +SL V++ATPGR+ LL + ++ VLDEADR+L +GF EEL
Sbjct: 125 VNLQMQSLRAGADVLVATPGRLLDLLASNA---LKLTQVSAFVLDEADRMLSLGFTEELE 181
Query: 228 VVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNV 287
V LP+ +QTLLFSAT +++ L ++ Y + T++Q+ I + +
Sbjct: 182 QVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQS--EQESTIEQRVITVNREQ 239
Query: 288 KDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSAL 347
K L H++ + + A+IFVS +C+ A H K+Q R L
Sbjct: 240 KTALLAHLIKQHQ---WSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVL 296
Query: 348 HRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
FK+G+ ++L+ATD+A+RG+DI + +V+N+D+PR P DY
Sbjct: 297 DGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADY 337
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/341 (37%), Positives = 190/341 (55%)
Query: 56 TDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFA 115
+ S +FA LG+ ELG PTPVQ IP +L G+DVL A TGSGKTAAFA
Sbjct: 5 SSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFA 64
Query: 116 LPILHRLAE-----DPYGVL-ALVITPTRELAYQLAEQFKALGSGLHLRCEVVV--GGMD 167
LP+L RL+E GV+ LV+ PTRELA Q+A+ F + S + + ++V GG+
Sbjct: 65 LPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVS 124
Query: 168 LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR 227
+ Q +SL V++ATPGR+ LL + ++ VLDEADR+L +GF EEL
Sbjct: 125 VNLQMQSLRAGADVLVATPGRLLDLLASNA---LKLTQVSAFVLDEADRMLSLGFTEELE 181
Query: 228 VVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNV 287
V LP+ +QTLLFSAT +++ L ++ Y + T++Q+ I + +
Sbjct: 182 QVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQS--EQESTIEQRVITVNREQ 239
Query: 288 KDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSAL 347
K L H++ + + A+IFVS +C+ A H K+Q R L
Sbjct: 240 KTALLAHLIKQHQ---WSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVL 296
Query: 348 HRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
FK+G+ ++L+ATD+A+RG+DI + +V+N+D+PR P DY
Sbjct: 297 DGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADY 337
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 127/345 (36%), Positives = 192/345 (55%)
Query: 52 NSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKT 111
N+++T F+ L L+E + KE+G T +Q IP +L G+DVLG A+TGSGKT
Sbjct: 81 NASSTSDIEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKT 140
Query: 112 AAFALP---ILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 167
AF +P +L+ L P G ++I+PTRELA Q+ K L H +V+GG +
Sbjct: 141 LAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGAN 200
Query: 168 LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR 227
+A L+ ++++ATPGR+ L+ VF + LV+DEADR+L++GFE+E+R
Sbjct: 201 RRAEADKLVKGVNLLVATPGRLLDHLQNTKGF--VFRNLRSLVIDEADRILEIGFEDEMR 258
Query: 228 VVFQCLP-KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFI 283
+ + LP +NRQTLLFSAT T+ ++ L +S Y + K TVE L+Q Y+ +
Sbjct: 259 QIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVV 318
Query: 284 PKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQR 343
+ + + L L + + I+F+S+C S D + LH + Q +R
Sbjct: 319 DSDKRFLLLFSFLKRNLK---KKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRR 375
Query: 344 LSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ F + + ILL T+VA+RGLDIP VD ++ YD P PRDY
Sbjct: 376 TNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDY 420
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 528 (190.9 bits), Expect = 8.9e-51, P = 8.9e-51
Identities = 129/374 (34%), Positives = 204/374 (54%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F L L+ ++ LG +P+P+Q+ IP L GKD++ A TGSGKTAAF +PI+ R
Sbjct: 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292
Query: 122 LAEDPYGVLA---LVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSLMN 177
L P + + +V+ PTRELA Q+A+ K + + + + VGG++L Q + L +
Sbjct: 293 LLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKS 352
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
RP +VIATPGR + V S + LV+DEADR+L+ GF++EL + LP NR
Sbjct: 353 RPDIVIATPGRFIDHIRNSASFN-VDS-VEILVMDEADRMLEEGFQDELNEIMGLLPSNR 410
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPK--NVKDVYLMHV 295
Q LLFSATM S +++L+ LS K K L Q+++ I K ++K L ++
Sbjct: 411 QNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALLFNL 470
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
+ K++ G + ++FV+ + H LH +Q QRL ++++FK+ +
Sbjct: 471 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEV 530
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
+L+ TD+ASRGLDIP +++V+NYD+P+ Y +FV ++ D
Sbjct: 531 PVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESSQDR 590
Query: 416 IHEIEAVVGKQLEE 429
+ A + K +EE
Sbjct: 591 -SIVRAAI-KSVEE 602
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 132/399 (33%), Positives = 209/399 (52%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL ++ +LG PTP+Q IP ILEG +++G A TG+GKTAA+ LP+L R
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
+ + L++TPTRELA Q+A++ LG L +R V GG + Q + L V
Sbjct: 64 IQRGKKAQV-LIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 241
++ TPGRI + P + K ++LDEAD +LD+GF +++ + L +QTLL
Sbjct: 123 IVGTPGRILDHIGRKT-FPA--AEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLL 179
Query: 242 FSATMTSDLQTLLE--LSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
FSAT+ + ++T+++ L K E KTV ++Q Y +P+ K L+ +L+
Sbjct: 180 FSATLPAPIKTIIKKFLGGYKTVKLVGRE--KTVPAIRQVYYELPETEKIEGLVSILNS- 236
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
++ I+ AI+F T + A LH SQ +R + FK+G+ +L+
Sbjct: 237 -ELPIQ-AIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLV 294
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDIP V V+N+DIP+ P Y + + + L+ I
Sbjct: 295 ATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAI 354
Query: 420 EAVVGKQLEEFECKEQEVLSDITRVYKAR-RVATMKLMD 457
E + K+L+ +E+L + + +AR + K++D
Sbjct: 355 EEAINKRLK------REILPEPVDLEEARFKKIAKKILD 387
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 132/399 (33%), Positives = 209/399 (52%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL ++ +LG PTP+Q IP ILEG +++G A TG+GKTAA+ LP+L R
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHV 181
+ + L++TPTRELA Q+A++ LG L +R V GG + Q + L V
Sbjct: 64 IQRGKKAQV-LIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 241
++ TPGRI + P + K ++LDEAD +LD+GF +++ + L +QTLL
Sbjct: 123 IVGTPGRILDHIGRKT-FPA--AEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLL 179
Query: 242 FSATMTSDLQTLLE--LSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
FSAT+ + ++T+++ L K E KTV ++Q Y +P+ K L+ +L+
Sbjct: 180 FSATLPAPIKTIIKKFLGGYKTVKLVGRE--KTVPAIRQVYYELPETEKIEGLVSILNS- 236
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
++ I+ AI+F T + A LH SQ +R + FK+G+ +L+
Sbjct: 237 -ELPIQ-AIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLV 294
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLDIP V V+N+DIP+ P Y + + + L+ I
Sbjct: 295 ATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAI 354
Query: 420 EAVVGKQLEEFECKEQEVLSDITRVYKAR-RVATMKLMD 457
E + K+L+ +E+L + + +AR + K++D
Sbjct: 355 EEAINKRLK------REILPEPVDLEEARFKKIAKKILD 387
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 506 (183.2 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 118/338 (34%), Positives = 190/338 (56%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
+FA L + E ++ +E+G + T +Q I +LEG+D+L A+TGSGKT AF +P+
Sbjct: 170 SFASLSNLVNENTLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPV 229
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ + + + G L+++PTRELA Q K L + H+ +++GG + + +
Sbjct: 230 IELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEVQ 288
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L+N ++V+ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + L
Sbjct: 289 KLLNGINIVVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLL 346
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
P RQT+LFSAT T ++ L +S K Y + K TV+ L+Q Y+ P + +
Sbjct: 347 PARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFL 406
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C S D +A+H + Q++R + +F
Sbjct: 407 LLFTFLKKNRK---KKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQF 463
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 464 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 501
Score = 37 (18.1 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 36 KNAKTTQLEKFTNPDPNSTTTDS-TVTFAG 64
K K ++ T PDP T+ T AG
Sbjct: 111 KKKKKRKIGNDTEPDPKKAKTEEGTEARAG 140
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 126/371 (33%), Positives = 195/371 (52%)
Query: 72 VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVL- 130
++ + G ++ TP+Q IP I G+DVL AQTG+GKTAAFALPIL ++ E+P L
Sbjct: 13 LRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQKMVENPSETLK 72
Query: 131 ----ALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATP 186
L++TPTRELA Q+AE +A L+ + GG+ + TQA+ L +++ATP
Sbjct: 73 SNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVATP 132
Query: 187 GRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATM 246
GR LLE S FLVLDEADR+LD+GF +++ + Q + K RQ LLFSAT
Sbjct: 133 GR---LLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQNLLFSATF 189
Query: 247 TSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRS 306
+S ++ L K A + T +T+ Q + + K L ++ K +
Sbjct: 190 SSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELIGKKN---WQQ 246
Query: 307 AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASR 366
++F +T + + +H K+Q R AL F SG+ +L+AT+VA+R
Sbjct: 247 VLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAAR 306
Query: 367 GLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQ 426
GLDIP+++ V+N+D+P DY SFV++ + + +IE ++G++
Sbjct: 307 GLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQK 366
Query: 427 LEEFECKEQEV 437
+ EV
Sbjct: 367 IRRITVPGYEV 377
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 120/331 (36%), Positives = 187/331 (56%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL+ ++ +E G P+P+Q IP +L GKDV+ AQTG+GKTA F LPIL
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 122 LAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMN 177
LA+ P V AL++TPTRELA Q+ + G L L+ VV GG+ + Q + +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
+++ATPGR+ L ++ F + + LVLDEADR+LD+GF ++ + + LP+ R
Sbjct: 123 GADILVATPGRLMDLYNQNA---VKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKR 179
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
Q LLFSAT +++++ L + N T T+ +Q I+ P +VK M ++
Sbjct: 180 QNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTV-EQCIY-PADVKKKPDM-LVK 236
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+++ + ++F+ T + A A+H KSQ R AL FK+G+ I
Sbjct: 237 LVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRI 296
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
L+ATD+A+RG+DIP + V+N+++P+ DY
Sbjct: 297 LVATDIAARGIDIPQLPQVVNFELPKIAEDY 327
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 120/331 (36%), Positives = 187/331 (56%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL+ ++ +E G P+P+Q IP +L GKDV+ AQTG+GKTA F LPIL
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 122 LAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMN 177
LA+ P V AL++TPTRELA Q+ + G L L+ VV GG+ + Q + +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
+++ATPGR+ L ++ F + + LVLDEADR+LD+GF ++ + + LP+ R
Sbjct: 123 GADILVATPGRLMDLYNQNA---VKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKR 179
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
Q LLFSAT +++++ L + N T T+ +Q I+ P +VK M ++
Sbjct: 180 QNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTV-EQCIY-PADVKKKPDM-LVK 236
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+++ + ++F+ T + A A+H KSQ R AL FK+G+ I
Sbjct: 237 LVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRI 296
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
L+ATD+A+RG+DIP + V+N+++P+ DY
Sbjct: 297 LVATDIAARGIDIPQLPQVVNFELPKIAEDY 327
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 128/391 (32%), Positives = 202/391 (51%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D+ + F+ L L + E+G PTP+Q IP +LEG+D LG AQTG+GKTAAF+L
Sbjct: 23 DTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSL 82
Query: 117 PILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSL 175
P+L++L Y A+V+ PTRELA Q+A + K LG + L+ + GG +L Q ++L
Sbjct: 83 PLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRAL 142
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
+ H+V+ TPGR+K L+ D +LDEAD +L +GF +++ + + P+
Sbjct: 143 KSGAHIVVGTPGRVKDLITRDR---LHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPE 199
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHV 295
+ Q +LFSATM ++ ++E + +TV ++QQY ++ K V+ M
Sbjct: 200 SAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQY-WVVKGVEKDEAMAR 258
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
L + E+ ++I+FV T + +A ALH QS R + K G
Sbjct: 259 LLETEETD--ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVI 316
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
IL+ATDV +RGLD+P + V NYDIP Y V N + +
Sbjct: 317 DILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRM 376
Query: 416 IHEIEAVVGKQLEEFECKEQEVLSDITRVYK 446
+ IE V +EE + ++ +++ +R+ K
Sbjct: 377 LRTIERVTRSSMEEIQLPHRDKVAE-SRLTK 406
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 129/382 (33%), Positives = 197/382 (51%)
Query: 56 TDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFA 115
++ ++TF+ LGL + T ELG+ PTP+Q IP +L+GKDVL AQTG+GKTAAF
Sbjct: 2 SELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFG 61
Query: 116 LPILHRLAEDPYG-------VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 168
LP++ R E P+ + ALV+ PTRELA Q+ + +A G L+ V GG +
Sbjct: 62 LPLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSM 121
Query: 169 LTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVF-SRTKFLVLDEADRVLDVGFEEELR 227
Q L ++IATPGR LL+ + +F + + LVLDEADR+LD+GF +L+
Sbjct: 122 KVQLNHLRGGVDILIATPGR---LLDH-AHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQ 177
Query: 228 VVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNV 287
V + L RQTL FSAT S ++ + + T ET++Q + K
Sbjct: 178 RVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR 237
Query: 288 KDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSAL 347
K L +++ + ++F T + +AV+++ KSQ R AL
Sbjct: 238 KRELLSYLIGSKN---WQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKAL 294
Query: 348 HRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSF 407
FK+G+ L+ATDVA+RGLDI ++ V+NYD+P DY S
Sbjct: 295 DDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSL 354
Query: 408 VTQNDVDLIHEIEAVVGKQLEE 429
++ ++ + IE ++ +L +
Sbjct: 355 LSHDEQPQLEAIERLLNTRLPQ 376
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 129/382 (33%), Positives = 197/382 (51%)
Query: 56 TDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFA 115
++ ++TF+ LGL + T ELG+ PTP+Q IP +L+GKDVL AQTG+GKTAAF
Sbjct: 2 SELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFG 61
Query: 116 LPILHRLAEDPYG-------VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 168
LP++ R E P+ + ALV+ PTRELA Q+ + +A G L+ V GG +
Sbjct: 62 LPLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSM 121
Query: 169 LTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVF-SRTKFLVLDEADRVLDVGFEEELR 227
Q L ++IATPGR LL+ + +F + + LVLDEADR+LD+GF +L+
Sbjct: 122 KVQLNHLRGGVDILIATPGR---LLDH-AHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQ 177
Query: 228 VVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNV 287
V + L RQTL FSAT S ++ + + T ET++Q + K
Sbjct: 178 RVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR 237
Query: 288 KDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSAL 347
K L +++ + ++F T + +AV+++ KSQ R AL
Sbjct: 238 KRELLSYLIGSKN---WQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKAL 294
Query: 348 HRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSF 407
FK+G+ L+ATDVA+RGLDI ++ V+NYD+P DY S
Sbjct: 295 DDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSL 354
Query: 408 VTQNDVDLIHEIEAVVGKQLEE 429
++ ++ + IE ++ +L +
Sbjct: 355 LSHDEQPQLEAIERLLNTRLPQ 376
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 128/391 (32%), Positives = 202/391 (51%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D+ + F+ L L + E+G PTP+Q IP +LEG+D LG AQTG+GKTAAF+L
Sbjct: 23 DTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSL 82
Query: 117 PILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSL 175
P+L++L Y A+V+ PTRELA Q+A + K LG + L+ + GG +L Q ++L
Sbjct: 83 PLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRAL 142
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
+ H+V+ TPGR+K L+ D +LDEAD +L +GF +++ + + P+
Sbjct: 143 KSGAHIVVGTPGRVKDLITRDR---LHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPE 199
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHV 295
+ Q +LFSATM ++ ++E + +TV ++QQY ++ K V+ M
Sbjct: 200 SAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQY-WVVKGVEKDEAMAR 258
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
L + E+ ++I+FV T + +A ALH QS R + K G
Sbjct: 259 LLETEETD--ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVI 316
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
IL+ATDV +RGLD+P + V NYDIP Y V N + +
Sbjct: 317 DILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRM 376
Query: 416 IHEIEAVVGKQLEEFECKEQEVLSDITRVYK 446
+ IE V +EE + ++ +++ +R+ K
Sbjct: 377 LRTIERVTRSSMEEIQLPHRDKVAE-SRLTK 406
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 132/351 (37%), Positives = 182/351 (51%)
Query: 79 GMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG-VLALVITPT 137
G PTP+Q IP ++ G+DV+GLAQTG+GKTAAFALPILHRL + G V ALVI PT
Sbjct: 20 GYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHRLQQGERGRVRALVIAPT 79
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA Q+ + F LG LR V GG+ + Q + L VV+A PGR LL+
Sbjct: 80 RELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAEVVVACPGR---LLDHIA 136
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELS 257
SR + LVLDEAD++ D+GF ++R V + LP RQTLLFSATM D++TL +
Sbjct: 137 QGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFSATMPIDIRTLAQDI 196
Query: 258 ANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSC 317
+ V Y + +++K L+ +L + S +IF T
Sbjct: 197 LVDPVTVQVGTVAPAVTVAHALYP-VEQHLKTPLLLELLRHTDT---ESVLIFTRTKHRA 252
Query: 318 HXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVL 377
A +L SQ++R +AL F+ G IL+ATD+A+RG+D+ V V+
Sbjct: 253 KRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAARGIDVSQVSHVI 312
Query: 378 NYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLE 428
NYDIP Y + VT +D ++ IE +G +E
Sbjct: 313 NYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERSLGAPIE 363
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 124/373 (33%), Positives = 195/373 (52%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F A + + G + PTP+Q IP ILEG DV+GLAQTG+GKTAA+ALP++
Sbjct: 1 MSFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVI 60
Query: 120 HRLAEDPYG-VLALVITPTRELAYQLAEQFKALGSGLHLR-CEVVVGGMDLLTQAKSLMN 177
++ P G V LV+ PTRELA Q+AE F++LG +R C + GG+++ Q + L +
Sbjct: 61 QKMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIY-GGVNMDQQIRRLRS 119
Query: 178 RPHVVIATPGRI-KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
VV+A PGR+ + DI V + L++DEADR+ D+GF+ +++ + +CL +
Sbjct: 120 GVDVVVACPGRLLDHIWRGTIDICGV----ETLIIDEADRMFDMGFQPDIQSILKCLVQP 175
Query: 237 RQTLLFSATMTSDLQTL-LELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHV 295
QTLLFSATM +++ L LE N + ++ + + K L+ +
Sbjct: 176 HQTLLFSATMPPEVRKLTLETQTNPVTIQIGTQA--PASSVSHSVYPVKNHQKTPLLIEI 233
Query: 296 LSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQA 355
L E +S +IF T +L SQ++R + + F+ G
Sbjct: 234 LKTTET---KSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNF 290
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
IL+ATD+A+RGLDI + V+NYD+P P DY S VT D D+
Sbjct: 291 KILVATDIAARGLDIDHISHVINYDMPDTPEDYTHRIGRTGRFDRTGQALSLVTGRDGDM 350
Query: 416 IHEIEAVVGKQLE 428
+ +I+ ++ ++
Sbjct: 351 VRDIQKLINSPIQ 363
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 139/438 (31%), Positives = 217/438 (49%)
Query: 8 DRNFPLFAKPKSKTRSKXXXXXXXXXXSKNAKTTQLEKFTNPDPNSTTTDSTVTFAGLGL 67
D + A+ + + K S+ + E+ + S T+ T F L L
Sbjct: 104 DEEDEVIAEEEEPKKKKKKQRKDTEAKSEEEEVEDKEEEKKLEETSIMTNKT--FESLSL 161
Query: 68 AEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP---ILHRLAE 124
++ ++ KE+G R T +Q IP ++ G+DVLG A+TGSGKT AF +P +L+R+
Sbjct: 162 SDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKF 221
Query: 125 DPY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVI 183
P G LVI PTRELA Q K L V+GG T+A+ L ++++
Sbjct: 222 TPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLV 281
Query: 184 ATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 243
ATPGR+ LE +F KFLV+DEADR+L+ FEE+L+ + LPK RQT LFS
Sbjct: 282 ATPGRLLDHLENTNGF--IFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFS 339
Query: 244 ATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLSKMED 301
AT ++ ++ L +S + + EG K V E L+Q Y +P ++ ++L+ L + +
Sbjct: 340 ATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQ- 398
Query: 302 MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLAT 361
G + ++F STC+S + + + Q++R +F + ILL T
Sbjct: 399 -GKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCT 457
Query: 362 DVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFV-TQNDVDLIHEIE 420
+VA+RGLD P VD ++ YD P P DY V T ++ I ++
Sbjct: 458 NVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQYLK 517
Query: 421 AVVGKQLEEFECKEQEVL 438
A +EE E +E+++L
Sbjct: 518 AAK-IPVEEHEFEEKKLL 534
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 118/374 (31%), Positives = 190/374 (50%)
Query: 59 TVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
T+TF L+ + K +G TP+Q IP L KDV+G AQTG+GKTAAF +P+
Sbjct: 2 TITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPL 61
Query: 119 LHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNR 178
+ ++ + + A+VI PTRELA Q++E+ +G R + GG D+ Q ++L
Sbjct: 62 VEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKN 121
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
PH+++ TPGR LL+ +VLDEAD +L++GF E++ + +P Q
Sbjct: 122 PHIIVGTPGR---LLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQ 178
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSATM + ++ + E + TV ++Q Y+ + + K L++
Sbjct: 179 TLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKK----FDTLTR 234
Query: 299 MEDM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ D+ AI+F T R A +H +Q++R+ AL +FK G +
Sbjct: 235 LLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEV 294
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVA+RGLDI V V N+D+P+ P Y +F+T + D++
Sbjct: 295 LVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLR 354
Query: 418 EIEAVVGKQLEEFE 431
IE ++++ +
Sbjct: 355 AIEQTTKRKMDRMK 368
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 136/397 (34%), Positives = 196/397 (49%)
Query: 54 TTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAA 113
TT + TF LGL + EL +PTP+Q IP + G+D++ A TGSGKTA
Sbjct: 2 TTVTTPATFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTAT 61
Query: 114 FALPILHRLAED-PYG--------VLALVITPTRELAYQLAEQFKALGSGLHLRCEV--- 161
FALP+L +L ED G V LV+ PTRELA Q+A+ K+ +H E+
Sbjct: 62 FALPMLQKLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYA--VHFNGEIKTL 119
Query: 162 -VVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDV 220
V GG+ + Q +L +++ATPGR+ L+ + I + K LVLDEADR+L +
Sbjct: 120 AVFGGVSVNIQMLALRGGVDILVATPGRLLDLISSNA-IK--LDKVKTLVLDEADRMLSL 176
Query: 221 GFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQY 280
GF EEL + PK +QTLLFSAT + TL + N + TL Q+
Sbjct: 177 GFTEELTALLALTPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSA--DASTLVQRV 234
Query: 281 IFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQ 340
+ K K L H++ + + R A+IFV+ C A H K Q
Sbjct: 235 FTVNKGEKTAVLAHLIQQEQ---WRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQ 291
Query: 341 SQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXX 400
S+R L FK+G +L+ATD+A+RGLDI + +V+N+++PR P DY
Sbjct: 292 SERSRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGE 351
Query: 401 XXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEV 437
S + D H +V+ K+ +F K ++V
Sbjct: 352 VGLAISLIDHEDY---HHF-SVIEKK-NKFRLKREQV 383
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 127/386 (32%), Positives = 198/386 (51%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
FA L L V G P+ +Q IP IL G D++G AQTG+GKTAAFALPILHR
Sbjct: 8 FAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHR 67
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSLMNRPH 180
+ AL++ PTRELA Q+A F+ + + V GG + Q K++ N
Sbjct: 68 IDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQ 127
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ATPGR+ L D V + LVLDEAD +L +GF ++L V+F+ +P+ RQT+
Sbjct: 128 IVVATPGRLCDHLRRDEK---VLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTV 184
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
LFSAT+ ++ + E + +TV ++Q ++ + + K ++ +L ++E
Sbjct: 185 LFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLL-EVE 243
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLA 360
D + I+FV T ++ +A AL+ +Q+QR + K G+ I++A
Sbjct: 244 DFD--ALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVA 301
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIE 420
TDVA+RGLD+P + V N D+P P Y VT + ++ IE
Sbjct: 302 TDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIE 361
Query: 421 AVVGKQLEEFECKEQEVLSDITRVYK 446
V G+++ E + + + D R+ K
Sbjct: 362 RVTGQKVAEVRLPDAQAVLD-ARIKK 386
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 118/338 (34%), Positives = 191/338 (56%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
+FA L + E ++ +E+G +R T +Q I +LEG+D+L A+TGSGKT AF +P+
Sbjct: 168 SFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPV 227
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ + + + G L+++PTRELA Q K L + H+ +++GG + + +
Sbjct: 228 IELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEVQ 286
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L+N ++++ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + L
Sbjct: 287 KLLNGINIIVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLL 344
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
P RQT+LFSAT T ++ L +S K Y + K TV+ L+Q Y+ P + +
Sbjct: 345 PARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFL 404
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C S D +A+H + Q++R + +F
Sbjct: 405 LLFTFLKKNRK---KKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQF 461
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 462 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 499
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 132/402 (32%), Positives = 205/402 (50%)
Query: 45 KFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLA 104
K N P T F L L++ ++ +++G T VQ IP +L G+DVLG A
Sbjct: 27 KQNNAAPEGEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAA 86
Query: 105 QTGSGKTAAFALP---ILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCE 160
+TGSGKT AF +P +LH L P G +VITPTRELA Q+ + L
Sbjct: 87 KTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFG 146
Query: 161 VVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDV 220
+V+GG + +A+ LM +++IATPGR+ L+ VF K L++DEADR+L++
Sbjct: 147 IVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGF--VFKNLKALIIDEADRILEI 204
Query: 221 GFEEELRVVFQCLP-KNRQTLLFSATMTSDLQTLLELSANKA-YFYEAYEGF--KTVETL 276
GFE+E+R + + LP ++RQ++LFSAT T+ ++ L +S F T + L
Sbjct: 205 GFEDEMRQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGL 264
Query: 277 KQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHS 336
+Q Y+ + + + L L + + I I+F+S+C S D + LH
Sbjct: 265 EQGYVVCDSDKRFLLLFSFLKRNQKKKI---IVFLSSCNSVKYYAELLNYIDLPVLELHG 321
Query: 337 FKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXX 396
+ Q +R + F + + IL+ TDVA+RGLDIP VD ++ +D P PRDY
Sbjct: 322 KQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTA 381
Query: 397 XXXXXXXXX-SFVTQNDVDLIHEIEAVVGKQLEEFECKEQEV 437
F+T N++ + ++A L E+E E ++
Sbjct: 382 RGTKGKGKSLMFLTPNELGFLRYLKASK-VPLNEYEFPENKI 422
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 129/382 (33%), Positives = 197/382 (51%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++FA LGL+E V+ + G +PTPVQ IP +L+G+D++ AQTG+GKT FALPIL
Sbjct: 1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Query: 120 HRLAED----------PYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 169
RL + P LV+TPTRELA Q+ E FK L + GG+ +
Sbjct: 61 ERLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMN 120
Query: 170 TQAKSLMNRPHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRV 228
Q +++ V++A PGR+ L + D+ S + LVLDEADR+LD+GF +++
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDL----SHVEILVLDEADRMLDMGFVHDVKK 176
Query: 229 VFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVK 288
V LP RQ LLFSAT ++D+ +L + E TVE ++Q+ + N K
Sbjct: 177 VLARLPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHK 236
Query: 289 DVYLMHVLSKMEDMGI-RSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSAL 347
L H+++ +G ++F T + AVA+H KSQ+ R AL
Sbjct: 237 RSLLAHLIT----VGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKAL 292
Query: 348 HRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSF 407
FK+G I++ATD+A+RGLDI + V+N+++P DY S
Sbjct: 293 ADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISL 352
Query: 408 VTQNDVDLIHEIEAVVGKQLEE 429
V ++ L+ IE + +++ +
Sbjct: 353 VAPDEEKLLKSIERMTKQKIAD 374
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 491 (177.9 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 122/335 (36%), Positives = 177/335 (52%)
Query: 54 TTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAA 113
TTT S+ F + L+ ++ LG PT +Q IP L GKD++G A TGSGKTAA
Sbjct: 255 TTTHSS--FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAA 312
Query: 114 FALPILHRLAEDPYGV---LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLT 170
F +PIL RL P V L++ PTRELA Q + S + + +GG+ L
Sbjct: 313 FIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKL 372
Query: 171 QAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVF 230
Q + L RP +VIATPGR + + +V+DEADR+L+ GF +EL +
Sbjct: 373 QEQELRKRPDIVIATPGRFIDHMRNSQGF--TVENIEIMVMDEADRMLEDGFADELNEII 430
Query: 231 QCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFI-PKN--V 287
Q PK+RQT+LFSATMT + L+ LS N+ T + L Q+++ + P+ +
Sbjct: 431 QACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELL 490
Query: 288 KDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSAL 347
+ L+++ ++ R IIF + H A +H SQ QR+ AL
Sbjct: 491 RPAMLIYLCKELFH---RRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRAL 547
Query: 348 HRFKSGQATILLATDVASRGLDIPTVDLVLNYDIP 382
F+ G+ LLATDVASRG+DI +++V+NY+ P
Sbjct: 548 EDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAP 582
Score = 41 (19.5 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 416 IHEIEAVVGKQLEEFECKEQEV 437
I E+E VV K L+E E +E+E+
Sbjct: 647 IEELEPVVQKVLDE-EKQEREL 667
Score = 39 (18.8 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 424 GKQLEEFECKEQEVLSD 440
GK++EE E Q+VL +
Sbjct: 644 GKEIEELEPVVQKVLDE 660
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 115/338 (34%), Positives = 190/338 (56%)
Query: 59 TVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
++ F+ L + E ++ +E+G ++ TP+Q I +LEGKD+LG A+TGSGKT AF +P
Sbjct: 118 SIEFSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPA 177
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ L + + G ++I+PTRELA Q+ + L H + +V+GG + +
Sbjct: 178 IEVLVKSNFKPRNGTGVIIISPTRELALQIYGVARELMK-YHTQTHGIVIGGASKKPEEE 236
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L ++++ATPGR+ L+ + K L++DEADR+L+VGFEEE+ + + +
Sbjct: 237 RLEKGVNLLVATPGRLLDHLQNTKGF--ITKNLKCLIIDEADRILEVGFEEEMHQIIKKV 294
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEG---FKTVETLKQQYIFIPKNVKDV 290
PK RQT+LFSAT T + + ++S N + Y + TVE L+Q Y+ P + +
Sbjct: 295 PKTRQTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERRFL 354
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K ++ + I+F+S+C + D + LH + Q +R + + F
Sbjct: 355 LLYTFLKK--NLS-KKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNTFYEF 411
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + IL+ TDVA+RGLDIP+VD ++ YD P P++Y
Sbjct: 412 VNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEY 449
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 116/337 (34%), Positives = 191/337 (56%)
Query: 61 TFAGL--GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP- 117
+FA L ++E ++ KE+G T +Q+ + +L+G+D++G AQTGSGKT AF +P
Sbjct: 186 SFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPA 245
Query: 118 --ILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 174
++++L P G ++I+PTREL+ Q K L + H +V+GG + +++
Sbjct: 246 VELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEK 305
Query: 175 LMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 234
L ++++ATPGR+ L+ PD ++ + L++DE DR+L++GFEEEL+ + LP
Sbjct: 306 LGKGINILVATPGRLLDHLQNSPDF--LYKNLQCLIIDEVDRILEIGFEEELKQIINLLP 363
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAY---EGFKTVETLKQQYIFIPKNVKDVY 291
K RQT+LFSAT T+ ++ L +L+ Y + TV+ L+Q YI P + +
Sbjct: 364 KRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLV 423
Query: 292 LMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L L K + ++F S+C S D ++H + Q++R + +F
Sbjct: 424 LFTFLKKNRK---KKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFC 480
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ ++ ILL TDVA+RGLDIP VD ++ YD P PR+Y
Sbjct: 481 NAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREY 517
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 128/381 (33%), Positives = 194/381 (50%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++FA LGL+E V + G +PTPVQ IP +L+G+D++ AQTG+GKT FALPIL
Sbjct: 1 MSFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Query: 120 HRLAED----------PYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 169
RL + P LV+TPTRELA Q+ + FK L + GG+ +
Sbjct: 61 ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN 120
Query: 170 TQAKSLMNRPHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRV 228
Q +++ V++A PGR+ L + D+ S + LVLDEADR+LD+GF +++
Sbjct: 121 PQVQAMARGVDVLVACPGRLLDLAGQGSVDL----SHVEILVLDEADRMLDMGFVHDVKK 176
Query: 229 VFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVK 288
V LP RQ LLFSAT + D+ L + E TVE ++Q+ +P + K
Sbjct: 177 VLARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHK 236
Query: 289 DVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALH 348
L H+++ ++F T + AVA+H KSQ+ R AL
Sbjct: 237 RALLAHLITAG---AWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALA 293
Query: 349 RFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFV 408
FK+G+ IL+ATD+A+RGLDI + V+N+++P DY S V
Sbjct: 294 DFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLV 353
Query: 409 TQNDVDLIHEIEAVVGKQLEE 429
++ L+ IE + +++ +
Sbjct: 354 APDEEKLLKSIERMTKQKIAD 374
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 118/338 (34%), Positives = 190/338 (56%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
+FA L + E ++ +E+G + T +Q I +LEG+D+L A+TGSGKT AF +P+
Sbjct: 182 SFASLSNLVNENTLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPV 241
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ + + + G L+++PTRELA Q K L + H+ +++GG + + +
Sbjct: 242 IELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEVQ 300
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L+N ++V+ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + L
Sbjct: 301 KLLNGINIVVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLL 358
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
P RQT+LFSAT T ++ L +S K Y + K TV+ L+Q Y+ P + +
Sbjct: 359 PARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFL 418
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C S D +A+H + Q++R + +F
Sbjct: 419 LLFTFLKKNRK---KKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQF 475
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 476 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 513
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 122/338 (36%), Positives = 192/338 (56%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP- 117
+FA L ++E ++ KE+G T +Q I +LEG+DVL A+TGSGKT AF +P
Sbjct: 160 SFASLSEVVSENTLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPS 219
Query: 118 --ILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
++++L P G +V++PTRELA Q K L + H+ +++GG + +A+
Sbjct: 220 IELIYKLKFMPRNGTGVIVLSPTRELAMQTYGVLKELMTH-HVHTYGLIMGGSNRSAEAQ 278
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L N ++++ATPGR+ L+ P +F + L++DEADR+L+VGFEEEL+ + + L
Sbjct: 279 KLANGVNILVATPGRLLDHLQNTPGF--MFKNLQCLIIDEADRILEVGFEEELKQIIKLL 336
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
PK RQ++LFSAT T ++ L +S K Y + K TVE L+Q Y+ P + +
Sbjct: 337 PKKRQSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFL 396
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C S D +A+H + Q++R + +F
Sbjct: 397 LLFTFLKKNRK---KKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQF 453
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ +D P P++Y
Sbjct: 454 CNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEY 491
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 133/382 (34%), Positives = 189/382 (49%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TFA LGL ++ +LG +P+P+Q CIP +L G+DVLG+AQTGSGKTAAF+LP+L
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVV---GGMDLLTQAKSLMN 177
L + LV+ PTRELA Q+AE H+R VV GG Q ++L
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSK--HMRGVNVVALYGGQRYDVQLRALRQ 124
Query: 178 RPHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
P +V+ TPGR+ L+ D+ S+ LVLDEAD +L +GF E++ + +P+
Sbjct: 125 GPQIVVGTPGRLLDHLKRGTLDL----SKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
QT LFSATM ++ + + T + Q Y + K+ L+ L
Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+ ED +AIIFV T + + AL+ +Q+ R L R K G+
Sbjct: 241 -EAEDFD--AAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLD 297
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
IL+ATDVA+RGLD+ + LV+NYDIP Y FV + L+
Sbjct: 298 ILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLL 357
Query: 417 HEIEAVVGKQLEEFECKEQEVL 438
IE + + E E E+L
Sbjct: 358 RNIERTMKLTIPEVELPNAELL 379
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 127/379 (33%), Positives = 201/379 (53%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F LGL+ ++ +E G PTPVQ IP IL+ +DV+ AQTG+GKTA F LP+L
Sbjct: 10 MSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69
Query: 120 HRL--AEDPYG------VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQ 171
RL + P + AL++TPTRELA Q+ E +A G L L+ VV GG+ + Q
Sbjct: 70 QRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129
Query: 172 AKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQ 231
L +++ATPGR+ L+ + SR +F VLDEADR+LD+GF ++R + +
Sbjct: 130 INHLRRGVDILVATPGRLLDLVNQGV---LNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP++RQ LLFSAT + +++ L + + E + + ++ P V
Sbjct: 187 LLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVAR--RNTAAARITHVVHP--VDRQR 242
Query: 292 LMHVLSKM-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
+LS M R ++F T + + A+H KSQ+ R+ AL +F
Sbjct: 243 KRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQF 302
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
K G+ +L+ATDVA+RGLDI + V+N+++P +DY S V+
Sbjct: 303 KQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSG 362
Query: 411 NDVDLIHEIEAVVGKQLEE 429
++V L+ +IE ++ ++ +
Sbjct: 363 DEVRLLRDIEKLLQSKMPQ 381
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 127/379 (33%), Positives = 201/379 (53%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F LGL+ ++ +E G PTPVQ IP IL+ +DV+ AQTG+GKTA F LP+L
Sbjct: 10 MSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69
Query: 120 HRL--AEDPYG------VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQ 171
RL + P + AL++TPTRELA Q+ E +A G L L+ VV GG+ + Q
Sbjct: 70 QRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129
Query: 172 AKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQ 231
L +++ATPGR+ L+ + SR +F VLDEADR+LD+GF ++R + +
Sbjct: 130 INHLRRGVDILVATPGRLLDLVNQGV---LNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP++RQ LLFSAT + +++ L + + E + + ++ P V
Sbjct: 187 LLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVAR--RNTAAARITHVVHP--VDRQR 242
Query: 292 LMHVLSKM-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
+LS M R ++F T + + A+H KSQ+ R+ AL +F
Sbjct: 243 KRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQF 302
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
K G+ +L+ATDVA+RGLDI + V+N+++P +DY S V+
Sbjct: 303 KQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSG 362
Query: 411 NDVDLIHEIEAVVGKQLEE 429
++V L+ +IE ++ ++ +
Sbjct: 363 DEVRLLRDIEKLLQSKMPQ 381
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 122/337 (36%), Positives = 182/337 (54%)
Query: 58 STVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP 117
+ VTF L L+E KE+G + T +Q I +LEGKDVLG A+TGSGKT AF +P
Sbjct: 87 TNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIP 146
Query: 118 ILHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
+ L ++ + G +VI PTRELA Q + L +V+GG + ++A+
Sbjct: 147 AVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQ 206
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
+ + ++VIATPGR+ L+ ++ K LV+DEADR+L+ FEE++ + + L
Sbjct: 207 RIASGSNLVIATPGRLLDHLQNTKAF--IYKHLKCLVIDEADRILEENFEEDMNKILKIL 264
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVY 291
PK RQT LFSAT TS ++ L +S + +G + V E L+Q Y +P + +
Sbjct: 265 PKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLIL 324
Query: 292 LMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L+ L K + I ++F STC+S D + +H Q++R F
Sbjct: 325 LISFLKKNLNKKI---MVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFM 381
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ ILL TDVA+RGLDIP+VD ++ YD P P +Y
Sbjct: 382 KAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEY 418
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 122/335 (36%), Positives = 184/335 (54%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL+E +Q KE+G T +Q IP +L G+DVLG A+TGSGKT AF +P +
Sbjct: 130 FTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 189
Query: 122 LAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMN 177
L+ + G +V++PTRELA Q+ + L + +V+GG + +A+ L
Sbjct: 190 LSALRFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYGIVIGGANRRAEAEKLTK 249
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP-KN 236
+++IATPGR+ L+ P VF K LV+DEADR+L+VGFE+E+R + + LP ++
Sbjct: 250 GVNLLIATPGRLLDHLQNTPGF--VFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNED 307
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDVYLM 293
RQT+LFSAT T+ ++ L +S Y + K TVE L+Q Y+ + + + L
Sbjct: 308 RQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLF 367
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
L + I I+F S+C D + LH + Q +R + F +
Sbjct: 368 SFLKRNLKKKI---IVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNA 424
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ +L+ TDVA+RGLDIP VD ++ +D P RDY
Sbjct: 425 KQGVLICTDVAARGLDIPAVDWIIQFDPPDDTRDY 459
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 128/373 (34%), Positives = 185/373 (49%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TFA GLAE ++ E G PTP+Q IP IL G DV G+AQTG+GKTAAF LP++
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
Query: 121 RLAEDPYGVL---ALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMN 177
RL+ L++ PTRELA Q+AE F+ G L L +++GG+ Q L
Sbjct: 65 RLSTGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQR 124
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
V+IATPGR L+++ + + L++DEADR+LD+GF ++ + LP NR
Sbjct: 125 GVDVLIATPGR---LMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANR 181
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
QTLLFSAT +D+Q L + E +T ET+ Q + +P N +
Sbjct: 182 QTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRR 241
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+E +++ I+F + +A +H QS R L RF+ G+ +
Sbjct: 242 VIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKL 301
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+A+DVA+RGLDIP V V N+ P DY + VT D
Sbjct: 302 LVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDKSWG 361
Query: 418 EIEAVVGKQLEEF 430
+ ++ K + EF
Sbjct: 362 FVVKMIKKDVPEF 374
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 117/328 (35%), Positives = 184/328 (56%)
Query: 69 EWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY- 127
E ++ KE+G T +Q I +LEG+D+L A+TGSGKT AF +P + + + +
Sbjct: 192 ENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFM 251
Query: 128 ---GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAKSLMNRPHVVI 183
G L+++PTRELA Q K L + H+ +++GG + +A+ L N ++V+
Sbjct: 252 PRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEAQKLANGINIVV 310
Query: 184 ATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 243
ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + LP RQT+LFS
Sbjct: 311 ATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFS 368
Query: 244 ATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDVYLMHVLSKME 300
AT T ++ L +S K Y + K TV+ L+Q Y+ P + + L L K
Sbjct: 369 ATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNR 428
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLA 360
+ ++F S+C+S D +A+H + Q++R + +F + + ILL
Sbjct: 429 K---KKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSGILLC 485
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDY 388
TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 486 TDVAARGLDIPEVDWIVQYDPPDDPKEY 513
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 117/328 (35%), Positives = 184/328 (56%)
Query: 69 EWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY- 127
E ++ KE+G T +Q I +LEG+D+L A+TGSGKT AF +P + + + +
Sbjct: 188 ENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFM 247
Query: 128 ---GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAKSLMNRPHVVI 183
G L+++PTRELA Q K L + H+ +++GG + +A+ L N ++V+
Sbjct: 248 PRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEAQKLANGINIVV 306
Query: 184 ATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 243
ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + LP RQT+LFS
Sbjct: 307 ATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFS 364
Query: 244 ATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDVYLMHVLSKME 300
AT T ++ L +S K Y + K TV+ L+Q Y+ P + + L L K
Sbjct: 365 ATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNR 424
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLA 360
+ ++F S+C+S D +A+H + Q++R + +F + + ILL
Sbjct: 425 K---KKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSGILLC 481
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDY 388
TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 482 TDVAARGLDIPEVDWIVQYDPPDDPKEY 509
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 120/338 (35%), Positives = 189/338 (55%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
+FA L + E ++ KE+G T +Q I +LEG+D+L A+TGSGKT AF +P
Sbjct: 179 SFASLTDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPA 238
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ + + + G L+++PTRELA Q K L + H+ +++GG + +A+
Sbjct: 239 VELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEAQ 297
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L N ++V+ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + L
Sbjct: 298 KLANGINIVVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLL 355
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
P RQT+LFSAT T ++ L +S K Y + K TV+ L+Q Y+ P + +
Sbjct: 356 PTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFL 415
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C+S D +A+H + Q++R + +F
Sbjct: 416 LLFTFLKKNRK---KKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQF 472
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 473 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 510
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 120/338 (35%), Positives = 189/338 (55%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
+FA L + E ++ KE+G T +Q I +LEG+D+L A+TGSGKT AF +P
Sbjct: 204 SFASLTDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPA 263
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ + + + G L+++PTRELA Q K L + H+ +++GG + +A+
Sbjct: 264 VELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEAQ 322
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L N ++V+ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + L
Sbjct: 323 KLANGINIVVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLL 380
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
P RQT+LFSAT T ++ L +S K Y + K TV+ L+Q Y+ P + +
Sbjct: 381 PTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFL 440
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C+S D +A+H + Q++R + +F
Sbjct: 441 LLFTFLKKNRK---KKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQF 497
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 498 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 535
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 120/338 (35%), Positives = 189/338 (55%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
+FA L + E ++ KE+G T +Q I +LEG+D+L A+TGSGKT AF +P
Sbjct: 175 SFASLTDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPA 234
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ + + + G L+++PTRELA Q K L + H+ +++GG + +A+
Sbjct: 235 VELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEAQ 293
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L N ++V+ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + L
Sbjct: 294 KLANGINIVVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLL 351
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
P RQT+LFSAT T ++ L +S K Y + K TV+ L+Q Y+ P + +
Sbjct: 352 PTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFL 411
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C+S D +A+H + Q++R + +F
Sbjct: 412 LLFTFLKKNRK---KKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQF 468
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 469 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 506
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 478 (173.3 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 130/371 (35%), Positives = 189/371 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP-IL 119
TF + + + + E G+++P+P+Q +P IL G+D++G+A TGSGKT F LP +L
Sbjct: 223 TFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPMVL 282
Query: 120 HRLAED---PY----GVLALVITPTRELA---YQLAEQF-KALG-SGLH--LRCEVVVGG 165
L E+ P G L++ P+RELA Y L F AL +G H LR + +GG
Sbjct: 283 FALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIGG 342
Query: 166 MDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE 225
+DL Q H++IATPGR+ LL + I F K+L LDEADR++D+GFE++
Sbjct: 343 IDLREQEHIFKKGVHMIIATPGRLLDLLNKKK-IN--FKLCKYLGLDEADRLIDLGFEDD 399
Query: 226 LRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLK--QQYIFI 283
+R V RQTLLFSATM +Q SA E G L Q+ F+
Sbjct: 400 IRSVLDNFTNQRQTLLFSATMPKKIQEFAR-SA-LVLPVEVNVGRAGAANLNVTQEVEFV 457
Query: 284 PKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQR 343
K VYL+ L K +IF + EAV++H KSQ +R
Sbjct: 458 KPEAKIVYLLECLQKTPP----PVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDER 513
Query: 344 LSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXX 403
SA+ F+ G+ +L+ATDVAS+GLD P + V+N+D+PR +Y
Sbjct: 514 ESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGV 573
Query: 404 XXSFVTQNDVD 414
+F+ +N+ +
Sbjct: 574 ATTFINKNNTE 584
Score = 41 (19.5 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 4 QILLDRNFPLFAKPKSKTR 22
Q LLD+ F + K ++KT+
Sbjct: 97 QSLLDQKFEMIKKQENKTQ 115
Score = 38 (18.4 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 37 NAKTTQLEKFTNPDPNSTTTDSTVT 61
NA T TN +TTT +T T
Sbjct: 54 NATATNTN-ITNTTTTTTTTTTTTT 77
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 119/338 (35%), Positives = 188/338 (55%)
Query: 61 TFAGLG--LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
+FA L + E ++ KE+G T +Q I +LEG+D+L A+TGSGKT AF +P
Sbjct: 177 SFASLSSLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPA 236
Query: 119 LHRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAK 173
+ + + + G L+++PTRELA Q K L H+ +++GG + +A+
Sbjct: 237 VELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMM-YHVHTYGLIMGGSNRSAEAQ 295
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L N ++++ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + L
Sbjct: 296 KLGNGINIIVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLL 353
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDV 290
P RQT+LFSAT T ++ L +S K Y + K TV+ L+Q Y+ P + +
Sbjct: 354 PTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFL 413
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + ++F S+C+S D +A+H + Q++R + +F
Sbjct: 414 LLFTFLKKNRK---KKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQF 470
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ + ILL TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 471 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 508
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 121/379 (31%), Positives = 197/379 (51%)
Query: 57 DSTV-TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFA 115
D TV +F + L ++ G RP+ +Q I +++G DV+ AQ+G+GKTA F+
Sbjct: 19 DETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFS 78
Query: 116 LPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+ +L ++ + AL++ PTRELA Q+ + A+G +++ C +GG + K+L
Sbjct: 79 ISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKAL 138
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRT---KFLVLDEADRVLDVGFEEELRVVFQC 232
+ P VV+ TPGR+ +++ F +T K VLDEAD +L GF E++ +FQ
Sbjct: 139 QDGPQVVVGTPGRVHDMIQRR------FLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQL 192
Query: 233 LPKNRQTLLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP++ Q +L SATM D L+ + + + T+E +KQ YI + K + +
Sbjct: 193 LPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDEL-TLEGIKQFYIAVEK---EEW 248
Query: 292 LMHVLSKM-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
+ LS + E + I A+IF +T R D A+H Q+QR + F
Sbjct: 249 KLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEF 308
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
+SG + +L+ATD+ +RG+D+ V LV+NYD+P +Y +FVT
Sbjct: 309 RSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTA 368
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+DV ++ EIE Q+EE
Sbjct: 369 DDVRMMREIEQFYSTQIEE 387
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 121/381 (31%), Positives = 191/381 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF LGL+E ++ ELG +PTP+Q+ I ++ GKD+LG AQTG+GKT AFALP+L+
Sbjct: 7 TFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLN 66
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGL-HLRCEVVVGGMDLLTQAKSLMNRP 179
++ + LV+ PTRELA Q+AE F + + + + GG + Q +L P
Sbjct: 67 KVTSQTTPQI-LVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGP 125
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
V++ TPGR+ + + LVLDEAD +L +GF +++ + + P RQ
Sbjct: 126 QVIVGTPGRVMDHMRRGT---LKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQL 182
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
LFSATM ++ + A TV++++Q+++ + ++ K L+ VL
Sbjct: 183 ALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLEVE 242
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
GI IIFV T SC + LH +Q R A+ + K+G+ IL+
Sbjct: 243 NTEGI---IIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILI 299
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLD+ + V+NYDIP Y FVT ++ ++ I
Sbjct: 300 ATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI 359
Query: 420 EAVVGKQLEEFECKEQEVLSD 440
E ++ + E +++
Sbjct: 360 ERATNSRISPMKVPSPETVAE 380
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 112/374 (29%), Positives = 191/374 (51%)
Query: 59 TVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
T+TF L+ ++ +G TP+Q IP L KDV+G AQTG+GKTAAF +P+
Sbjct: 2 TITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPL 61
Query: 119 LHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNR 178
+ ++ + + A+VI PTRELA Q++E+ +G + + GG D+ Q ++L
Sbjct: 62 VEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKN 121
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
P++++ TPGR LL+ + +V+DEAD +L++GF +++ + +P Q
Sbjct: 122 PNIIVGTPGR---LLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQ 178
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
TLLFSATM + ++ + E + + TV ++Q Y+ + + K L++
Sbjct: 179 TLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKK----FDTLTR 234
Query: 299 MEDM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ D+ AI+F T R A +H +Q++R+ AL +FK G +
Sbjct: 235 LLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEV 294
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVA+RGLDI V V N+D+P+ P Y +F+T + ++
Sbjct: 295 LVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLR 354
Query: 418 EIEAVVGKQLEEFE 431
IE ++++ +
Sbjct: 355 AIEQTTKRKMDRMK 368
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 117/338 (34%), Positives = 193/338 (57%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+S + AGL ++E ++ ++G T +Q I +LEG+D+L A+TGSGKT AF +
Sbjct: 164 NSFTSLAGL-VSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLI 222
Query: 117 P---ILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQ 171
P ++++L P G ++++PTRELA Q K L + H+ +++GG + +
Sbjct: 223 PAVELIYKLKFMPRNGTGVIILSPTRELAMQTYGVLKELMNH-HVHTYGLIMGGSNRSAE 281
Query: 172 AKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQ 231
A+ L N ++++ATPGR+ ++ P ++ + LV+DEADR+L+VGFEEE++ + +
Sbjct: 282 AQKLGNGINIIVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILEVGFEEEMKQIIK 339
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVK 288
LPK RQT+LFSAT T ++ L ++S K Y + K TV+ L+Q Y+ P +
Sbjct: 340 LLPKRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKR 399
Query: 289 DVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALH 348
+ L L K + ++F S+C S D +A+H + Q++R +
Sbjct: 400 FLLLFTFLKKNRK---KKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFF 456
Query: 349 RFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPR 386
+F + ++ ILL TDVA+RGLDIP VD ++ YD P P+
Sbjct: 457 QFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPK 494
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 125/362 (34%), Positives = 192/362 (53%)
Query: 72 VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H-----RLAED 125
++ +LG PTP+Q P L+G+D++G+A+TGSGKT A+ LP L H RL +D
Sbjct: 177 LEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQD 236
Query: 126 PYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIAT 185
G + L++ PTRELA Q+ E+ + G +R + GG Q + L +VIAT
Sbjct: 237 D-GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295
Query: 186 PGRIKVLLE-EDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSA 244
PGR+ +LE + ++ R +LVLDEADR+LD+GFE ++R + + +RQTLL+SA
Sbjct: 296 PGRLIDMLECQHTNL----KRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSA 351
Query: 245 TMTSDLQTLLELSANKAYFYEAYEG---FKTVETLKQQYIFIPKNVKDVYLMHVLSKMED 301
T +++TL Y +A G K +++ Q +P K L+ +L ++ D
Sbjct: 352 TWPREVETLARQFLRDPY--KAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMD 409
Query: 302 MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLAT 361
G + +IFV T R C A+A+H K+QS+R L FKSG++ I+ AT
Sbjct: 410 -GSK-ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTAT 467
Query: 362 DVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEA 421
DVA+RGLD+ + V+NYD P DY +F T ++ E+
Sbjct: 468 DVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVK 527
Query: 422 VV 423
++
Sbjct: 528 IL 529
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 129/390 (33%), Positives = 203/390 (52%)
Query: 18 KSKTRSKXXXXXXXXXXSKNAKTTQLEKFTNPDPNS---------TTTDSTVTFAGL-GL 67
K+KT +K +K + +EK N + S T +FA L L
Sbjct: 127 KAKTENKGKSEEESAETTKETENN-VEKPDNDEDESEVPSLPLGLTGAFEDTSFASLCNL 185
Query: 68 A-EWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDP 126
E ++ KE+G T +Q I +LEG+D+L A+TGSGKT AF +P + + +
Sbjct: 186 VNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR 245
Query: 127 Y----GVLALVITPTRELAYQLAEQFKALGSGLHLRCE-VVVGGMDLLTQAKSLMNRPHV 181
+ G L+++PTRELA Q K L + H+ +++GG + +A+ L N ++
Sbjct: 246 FMPRNGTGVLILSPTRELAMQTFGVLKELMTH-HVHTYGLIMGGSNRSAEAQKLGNGINI 304
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 241
++ATPGR+ ++ P ++ + LV+DEADR+LDVGFEEEL+ + + LP RQT+L
Sbjct: 305 IVATPGRLLDHMQNTPGF--MYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTML 362
Query: 242 FSATMTSDLQTLLELSANKAYFYEAYEGFK---TVETLKQQYIFIPKNVKDVYLMHVLSK 298
FSAT T ++ L +S K Y + K TV+ L+Q Y+ P + + L L K
Sbjct: 363 FSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKK 422
Query: 299 MEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
+ ++F S+C S D +A+H + Q++R + +F + + L
Sbjct: 423 NRK---KKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTL 479
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
L TDVA+RGLDIP VD ++ YD P P++Y
Sbjct: 480 LCTDVAARGLDIPEVDWIVQYDPPDDPKEY 509
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 498 (180.4 bits), Expect = 3.1e-47, P = 3.1e-47
Identities = 129/388 (33%), Positives = 191/388 (49%)
Query: 35 SKNAKTTQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKI 94
SK + E F +++ D ++F + L+ ++ LG ++PTP+Q CIP
Sbjct: 158 SKKGGQKEAESFFE---DASEYDDNLSFQDMNLSRPLLKAITALGFKQPTPIQKACIPVG 214
Query: 95 LEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGV---LALVITPTRELAYQLAEQFKAL 151
L GKD+ A TG+GKTAAF LP+L RL P LV+ PTREL Q+ K L
Sbjct: 215 LLGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQL 274
Query: 152 GSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVL 211
+ + VGG+D+ TQ +L + P ++IATPGR+ L P S + L+L
Sbjct: 275 AQFSSVTTCLAVGGLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFH--LSSVEVLIL 332
Query: 212 DEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK 271
DEADR+LD FEE+++ + + ++RQT+LFSATMT +++ L +S
Sbjct: 333 DEADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMTEEVKDLASVSLKNPTRIFVNSNTD 392
Query: 272 TVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEA 331
L+Q++I I N + V + + ++F T + H
Sbjct: 393 VAPFLRQEFIRIRPNREGDREAIVSALLTRTFPDHVMLFTQTKKQAHRMHILLGLMGLRV 452
Query: 332 VALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXX 391
LH SQ+QRL AL RFK Q IL+ATDVA+RGLDI V V+N+ +P + Y
Sbjct: 453 GELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHR 512
Query: 392 XXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
S V + + ++ EI
Sbjct: 513 VGRTARAGRAGRSVSLVGEEERKMLKEI 540
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 120/389 (30%), Positives = 198/389 (50%)
Query: 43 LEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLG 102
LE+ + S + T +F + L ++ G RP+ +Q I I++G DV+
Sbjct: 8 LEEIPDSQIESNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIA 67
Query: 103 LAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVV 162
AQ+G+GKTA F++ L +L + AL++ PTRELA Q+ + A+G ++++C
Sbjct: 68 QAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHAC 127
Query: 163 VGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGF 222
+GG + +L P +V+ TPGRI +++ + + K +LDEAD +L GF
Sbjct: 128 IGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRR--VLKT-DQMKMFILDEADEMLSRGF 184
Query: 223 EEELRVVFQCLPKNRQTLLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYI 281
E++ +FQ LP++ Q +L SATM D L+ + + + T+E +KQ YI
Sbjct: 185 TEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQEL-TLEGIKQFYI 243
Query: 282 FIPKNVKDVYLMHVLSKM-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQ 340
+ K + + + LS + E + I A+IF +T R D A+H Q
Sbjct: 244 AVEK---EEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQ 300
Query: 341 SQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXX 400
+QR + F+SG + +L+ATD+ +RG+D+ V LV+NYD+P +Y
Sbjct: 301 AQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGR 360
Query: 401 XXXXXSFVTQNDVDLIHEIEAVVGKQLEE 429
+FVT +DV ++ EIE Q+EE
Sbjct: 361 KGVAINFVTADDVRMMREIEQFYSTQIEE 389
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 497 (180.0 bits), Expect = 4.1e-47, P = 4.1e-47
Identities = 124/366 (33%), Positives = 184/366 (50%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D +++F + L+ ++ +G ++PTP+Q CIP L GKD+ A TG+GKTAAFAL
Sbjct: 181 DKSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 240
Query: 117 PILHRLAEDPYGVLA---LVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
P+L RL P LV+ PTREL Q+ K L + + VGG+D+ +Q
Sbjct: 241 PVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEA 300
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
+L P ++IATPGR+ L P S + L+LDEADR+LD FEE+++ + +
Sbjct: 301 ALRAAPDILIATPGRLIDHLHNCPSFH--LSSIEVLILDEADRMLDEYFEEQMKEIIRMC 358
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
+RQT+LFSATMT +++ L +S L+Q++I I N +
Sbjct: 359 SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREA 418
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
V + + ++F T + H + LH SQ+QRL AL RFK
Sbjct: 419 IVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDE 478
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
Q IL+ATDVA+RGLDI V V+N+ +P + Y S V + +
Sbjct: 479 QIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEER 538
Query: 414 DLIHEI 419
++ EI
Sbjct: 539 KMLKEI 544
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 133/391 (34%), Positives = 202/391 (51%)
Query: 61 TFAGLGLAEWA---VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP 117
TFA + L E ++ CK + +PTPVQ H IP +LEG+D++ AQTGSGKTAAF P
Sbjct: 160 TFAEIDLGEALNLNIRRCKYV---KPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFP 216
Query: 118 ILHRLAED-----PYGV-----LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 167
I+ + +D P G LA++++PTRELA Q+ ++ K ++ V GG
Sbjct: 217 IISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTP 276
Query: 168 LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR 227
+ Q + L +++ATPGR+ LLE +FL LDEADR+LD+GFE ++R
Sbjct: 277 INQQLRELERGVDILVATPGRLNDLLER---ARVSMQMIRFLALDEADRMLDMGFEPQIR 333
Query: 228 VVFQCL---PKN-RQTLLFSATMTSDLQTLL-ELSANKAYFYEAYEGFKTVETLKQQYIF 282
+ + + P+ RQTLLFSAT ++Q L + AN + G T + + Q+ F
Sbjct: 334 KIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSST-DLIVQRVEF 392
Query: 283 IPKNVKDVYLMHVLSKMEDMGIRS----AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFK 338
+ + K +LM +L + GI+ ++FV T R A ++H +
Sbjct: 393 VLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDR 452
Query: 339 SQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXX 398
+Q +R AL FKSG+ IL+ATDVA+RGLDIP V V+N+D+P DY
Sbjct: 453 TQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRA 512
Query: 399 XXXXXXXSFVTQNDVDLIHEIEAVVGKQLEE 429
+F + L + ++ + +E
Sbjct: 513 GKSGLATAFFNDGNTSLARPLAELMQEANQE 543
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 496 (179.7 bits), Expect = 5.7e-47, P = 5.7e-47
Identities = 123/366 (33%), Positives = 184/366 (50%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D ++F + L+ ++ +G ++PTP+Q CIP L GKD+ A TG+GKTAAFAL
Sbjct: 184 DENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 243
Query: 117 PILHRLAEDPYG---VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
P+L RL P LV+ PTREL Q+ K L ++ + VGG+D+ +Q
Sbjct: 244 PVLERLIYKPRQSPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEA 303
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
+L P ++IATPGR+ L P S + L+LDEADR+LD FEE+++ + +
Sbjct: 304 ALRAAPDILIATPGRLIDHLHNCPSFH--LSSIEVLILDEADRMLDEYFEEQMKEIIRMC 361
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
+RQT+LFSATMT +++ L +S L+Q+++ I N +
Sbjct: 362 SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREA 421
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
V + + ++F T + H + LH SQ+QRL AL RFK
Sbjct: 422 IVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE 481
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
Q IL+ATDVA+RGLDI V V+N+ +P + Y S V + +
Sbjct: 482 QIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEER 541
Query: 414 DLIHEI 419
++ EI
Sbjct: 542 KMLKEI 547
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 496 (179.7 bits), Expect = 7.0e-47, P = 7.0e-47
Identities = 123/366 (33%), Positives = 184/366 (50%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D ++F + L+ ++ +G ++PTP+Q CIP L GKD+ A TG+GKTAAFAL
Sbjct: 205 DENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 264
Query: 117 PILHRLAEDPYG---VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
P+L RL P LV+ PTREL Q+ K L ++ + VGG+D+ +Q
Sbjct: 265 PVLERLIYKPRQSPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEA 324
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
+L P ++IATPGR+ L P S + L+LDEADR+LD FEE+++ + +
Sbjct: 325 ALRAAPDILIATPGRLIDHLHNCPSFH--LSSIEVLILDEADRMLDEYFEEQMKEIIRMC 382
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
+RQT+LFSATMT +++ L +S L+Q+++ I N +
Sbjct: 383 SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREA 442
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
V + + ++F T + H + LH SQ+QRL AL RFK
Sbjct: 443 IVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE 502
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
Q IL+ATDVA+RGLDI V V+N+ +P + Y S V + +
Sbjct: 503 QIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEER 562
Query: 414 DLIHEI 419
++ EI
Sbjct: 563 KMLKEI 568
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 494 (179.0 bits), Expect = 9.4e-47, P = 9.4e-47
Identities = 124/366 (33%), Positives = 183/366 (50%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D ++F + L+ ++ +G ++PTP+Q CIP L GKD+ A TG+GKTAAFAL
Sbjct: 184 DENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 243
Query: 117 PILHRLAEDPYGV---LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
P+L RL P LV+ PTREL Q+ K L + + VGG+D+ +Q
Sbjct: 244 PVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEA 303
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
+L P ++IATPGR+ L P S + L+LDEADR+LD FEE+++ + +
Sbjct: 304 ALRAAPDILIATPGRLIDHLHNCPSFH--LSSIEVLILDEADRMLDEYFEEQMKEIIRMC 361
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
+RQT+LFSATMT +++ L +S L+Q++I I N +
Sbjct: 362 SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREA 421
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
V + + ++F T + H + LH SQ+QRL AL RFK
Sbjct: 422 IVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE 481
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
Q IL+ATDVA+RGLDI V V+N+ +P + Y S V + +
Sbjct: 482 QIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEER 541
Query: 414 DLIHEI 419
++ EI
Sbjct: 542 KMLKEI 547
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 495 (179.3 bits), Expect = 9.7e-47, P = 9.7e-47
Identities = 123/366 (33%), Positives = 185/366 (50%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D ++F + L+ ++ +G ++PTP+Q CIP L GKD+ A TG+GKTAAFAL
Sbjct: 215 DENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 274
Query: 117 PILHRLAEDPYGV---LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
P+L RL P LV+ PTREL Q+ + L ++ + VGG+D+ +Q
Sbjct: 275 PVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEA 334
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
+L P ++IATPGR+ L P S + L+LDEADR+LD FEE+++ + +
Sbjct: 335 ALRAAPDILIATPGRLIDHLHNCPSFH--LSSIEVLILDEADRMLDEYFEEQMKEIIRMC 392
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
+RQT+LFSATMT +++ L +S L+Q++I I N +
Sbjct: 393 SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREA 452
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
V + + ++F T + H + LH SQ+QRL AL RFK
Sbjct: 453 IVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE 512
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
Q IL+ATDVA+RGLDI V V+N+ +P + Y S V +++
Sbjct: 513 QIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDER 572
Query: 414 DLIHEI 419
++ EI
Sbjct: 573 KMLKEI 578
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 123/355 (34%), Positives = 188/355 (52%)
Query: 72 VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP-ILHRLAED---PY 127
+ T KE G+ +PTP+Q +P IL G+D++G+A TGSGKT F LP I+ L E+ P
Sbjct: 158 LDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPI 217
Query: 128 ----GVLALVITPTRELA---YQLAEQFKA--LGSGLH-LRCEVVVGGMDLLTQAKSLMN 177
G + L++ P+RELA Y++ EQF A + +G LR + +GG+D+ +Q + +
Sbjct: 218 AAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKR 277
Query: 178 RPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
H+V+ATPGR+K +L + ++L LDEADR++D+GFE+++R VF R
Sbjct: 278 GVHIVVATPGRLKDMLAKKK---MSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQR 334
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVL 296
QTLLFSATM + +Q + K G ++ + Q+ ++ + K VYL+ L
Sbjct: 335 QTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVI-QEVEYVKQEAKIVYLLECL 393
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
K +IF EAVA+H K Q R A+ FK+G+
Sbjct: 394 QKTSP----PVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKD 449
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
+L+ATDVAS+GLD P + V+NYD+P +Y +F+ +N
Sbjct: 450 VLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKN 504
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 127/371 (34%), Positives = 194/371 (52%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL+ + E G ++ T VQ IP L GKD++ AQTG+GKTAAFALP+L +
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQ 62
Query: 122 LAEDPYG---VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNR 178
LA P + ALV+TPTRELA Q+ + L L+ V GG ++ Q K +
Sbjct: 63 LAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 122
Query: 179 PHVVIATPGRI-KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
+++ATPGR+ ++ + + D+ V + LV+DEADR+LD+GF ++ V + +
Sbjct: 123 VDILVATPGRLFDIIGQFNLDLSSVTT----LVIDEADRMLDLGFVRDIEKVKRLIAPVH 178
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
QT+LFSAT + ++ L N+ + E T T++Q + K K L ++
Sbjct: 179 QTMLFSATYSDAVKQLSHKMLNQPQWVNVAEN-TTASTVEQLVYRVDKRRKAELLSELVG 237
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ-EAVALHSFKSQSQRLSALHRFKSGQAT 356
+ R ++F ST + C D A H K+Q R L FK+G+
Sbjct: 238 RNN---WRQVLVFAST-KECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLR 293
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
+L+ATDVA+RGLDI + LV+N ++P DY SFV+ D +++
Sbjct: 294 VLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEML 353
Query: 417 HEIEAVVGKQL 427
EIEA++G++L
Sbjct: 354 AEIEALIGEKL 364
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 127/371 (34%), Positives = 194/371 (52%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LGL+ + E G ++ T VQ IP L GKD++ AQTG+GKTAAFALP+L +
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQ 62
Query: 122 LAEDPYG---VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNR 178
LA P + ALV+TPTRELA Q+ + L L+ V GG ++ Q K +
Sbjct: 63 LAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 122
Query: 179 PHVVIATPGRI-KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
+++ATPGR+ ++ + + D+ V + LV+DEADR+LD+GF ++ V + +
Sbjct: 123 VDILVATPGRLFDIIGQFNLDLSSVTT----LVIDEADRMLDLGFVRDIEKVKRLIAPVH 178
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
QT+LFSAT + ++ L N+ + E T T++Q + K K L ++
Sbjct: 179 QTMLFSATYSDAVKQLSHKMLNQPQWVNVAEN-TTASTVEQLVYRVDKRRKAELLSELVG 237
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ-EAVALHSFKSQSQRLSALHRFKSGQAT 356
+ R ++F ST + C D A H K+Q R L FK+G+
Sbjct: 238 RNN---WRQVLVFAST-KECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLR 293
Query: 357 ILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI 416
+L+ATDVA+RGLDI + LV+N ++P DY SFV+ D +++
Sbjct: 294 VLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEML 353
Query: 417 HEIEAVVGKQL 427
EIEA++G++L
Sbjct: 354 AEIEALIGEKL 364
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 343 (125.8 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 93/306 (30%), Positives = 154/306 (50%)
Query: 131 ALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD-LLTQAKSLMNRPHVVIATPGRI 189
ALV++PTREL+ Q+ + + + ++ GG + Q L H++IATPGR+
Sbjct: 318 ALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRL 377
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQC--LP--KNRQTLLFSAT 245
++++ I ++LVLDEADR+LD+GFE ++R + +C +P + R T +FSAT
Sbjct: 378 IDVMDQGL-IG--MEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSAT 434
Query: 246 MTSDLQTLLE--LSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMG 303
++Q L + L N + G T E + Q+ +++ ++ K YLM +L D
Sbjct: 435 FPKEIQLLAQDFLKENYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLMDLLDATGDSS 493
Query: 304 IRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDV 363
+ ++FV T R + E V +H Q +R L F++G A IL+AT V
Sbjct: 494 L--TLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAV 551
Query: 364 ASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVV 423
A+RGLDIP V V+NYD+P +Y SF + ++ E+ ++
Sbjct: 552 AARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLI 611
Query: 424 GKQLEE 429
+ +E
Sbjct: 612 VEANQE 617
Score = 175 (66.7 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 43/122 (35%), Positives = 66/122 (54%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F+ L L EW + K G RPTPVQ + IP + G+D++ AQTGSGKTAAF +P+++
Sbjct: 233 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 292
Query: 122 LAED-PYGV---------------LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGG 165
+ +D P V ALV++PTREL+ Q+ + + + ++ GG
Sbjct: 293 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 352
Query: 166 MD 167
+
Sbjct: 353 RE 354
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 489 (177.2 bits), Expect = 3.2e-46, P = 3.2e-46
Identities = 129/389 (33%), Positives = 191/389 (49%)
Query: 35 SKNAKTTQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKI 94
SK + E F +++ D ++F + L+ ++ LG ++PTP+Q CIP
Sbjct: 158 SKKGGQKEAESFFE---DASEYDDNLSFQDMNLSRPLLKAITALGFKQPTPIQKACIPVG 214
Query: 95 LEGKDVLGLAQTGS-GKTAAFALPILHRLAEDPYGV---LALVITPTRELAYQLAEQFKA 150
L GKD+ A TG+ GKTAAF LP+L RL P LV+ PTREL Q+ K
Sbjct: 215 LLGKDICACAATGTVGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQ 274
Query: 151 LGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLV 210
L + + VGG+D+ TQ +L + P ++IATPGR+ L P S + L+
Sbjct: 275 LAQFSSVTTCLAVGGLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFH--LSSVEVLI 332
Query: 211 LDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGF 270
LDEADR+LD FEE+++ + + ++RQT+LFSATMT +++ L +S
Sbjct: 333 LDEADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMTEEVKDLASVSLKNPTRIFVNSNT 392
Query: 271 KTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQE 330
L+Q++I I N + V + + ++F T + H
Sbjct: 393 DVAPFLRQEFIRIRPNREGDREAIVSALLTRTFPDHVMLFTQTKKQAHRMHILLGLMGLR 452
Query: 331 AVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXX 390
LH SQ+QRL AL RFK Q IL+ATDVA+RGLDI V V+N+ +P + Y
Sbjct: 453 VGELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVH 512
Query: 391 XXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
S V + + ++ EI
Sbjct: 513 RVGRTARAGRAGRSVSLVGEEERKMLKEI 541
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 121/371 (32%), Positives = 189/371 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+FA L L + + +G TP+Q +P IL+G+DV+G +TGSGKTAAF L +L
Sbjct: 5 SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSLMNRP 179
L + V ALV+ PTRELA Q+A + LG +H ++ + GGM + Q SL +
Sbjct: 65 NLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGA 124
Query: 180 HVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ TPGRI L +D D+ S LVLDEADR+L++GF+E L + P RQ
Sbjct: 125 HILVGTPGRILDHLSKDRIDL----SELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQ 180
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNV-KDVYLMHVLS 297
TLLFSAT + ++ + + A + E +++Q + + + +D L +L
Sbjct: 181 TLLFSATYPASIEQIAQSVTRNALMIKV-EATHDTSSIRQYFYKVEGSAARDEALETLLL 239
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ S+++F +T R + LH Q +R AL +F + +I
Sbjct: 240 HHQPT---SSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISI 296
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ATDVA+RGLD+ +D V NYD+ R P + SF + N+ +
Sbjct: 297 LVATDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVA 356
Query: 418 EIEAVVGKQLE 428
+I+ + +E
Sbjct: 357 QIDEYMDIAIE 367
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 494 (179.0 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 117/367 (31%), Positives = 186/367 (50%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAED 125
GL + T K+L +P P+QT +P I+ G+D +G+A+TGSGKT F LP+L + +
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594
Query: 126 PY-----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
P G + LV+ PTREL Q+ + L +RC V GG + Q L
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654
Query: 181 VVIATPGR-IKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
+V+ TPGR I +L I + R FLV+DEADR+ D+GFE ++ + Q + RQT
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNL-RRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQT 713
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
+LFSAT ++TL NK E G ++V + + Q P++ + + L+ +L
Sbjct: 714 VLFSATFPRQVETLARKVLNKPV--EIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLG 771
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ + G ++FV + C ++LH K Q+ R S + FK+ +
Sbjct: 772 EWSEKG--KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNL 829
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ ++LV+N+D P + DY +F++++D
Sbjct: 830 LIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAP 889
Query: 414 DLIHEIE 420
DL+ +E
Sbjct: 890 DLVKALE 896
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 372 (136.0 bits), Expect = 5.6e-46, Sum P(2) = 5.6e-46
Identities = 94/294 (31%), Positives = 155/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 310 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 369
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 370 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 426
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ ++ K +L+ +L+ E
Sbjct: 427 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATESGKDS 486
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 487 LTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 546
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 547 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 600
Score = 142 (55.0 bits), Expect = 5.6e-46, Sum P(2) = 5.6e-46
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 244 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPG 290
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 129/389 (33%), Positives = 204/389 (52%)
Query: 61 TFAGLGLAEWA---VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP 117
TFA + L + ++ CK + RPTPVQ H IP +L +D++ AQTGSGKTAAF P
Sbjct: 152 TFADIDLGDALNLNIRRCKYV---RPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFP 208
Query: 118 ILHRLAED-----PYGV-----LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 167
I+ + +D P G A++++PTRELA Q+ ++ K ++ V GG
Sbjct: 209 IISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTP 268
Query: 168 LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR 227
+ Q + L +++ATPGR+ LLE +FL LDEADR+LD+GFE ++R
Sbjct: 269 IHQQLRELERGCDILVATPGRLNDLLER---ARVSMQMIRFLALDEADRMLDMGFEPQIR 325
Query: 228 VVFQCL---PKN-RQTLLFSATMTSDLQTLL-ELSANKAYFYEAYEGFKTVETLKQQYIF 282
+ + + P+ RQT+LFSAT S +Q L + +N + G T + + Q+ F
Sbjct: 326 KIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSST-DLITQRVEF 384
Query: 283 IPKNVKDVYLMHVL-SKMEDMGIRS-AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQ 340
+ ++ K +LM +L ++ E +S ++FV T R + A ++H ++Q
Sbjct: 385 VQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQ 444
Query: 341 SQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXX 400
+R AL FK+G+ IL+ATDVA+RGLDIP V V+N+D+P DY
Sbjct: 445 QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 504
Query: 401 XXXXXSFVTQNDVDLIHEIEAVVGKQLEE 429
+F +N+ L + ++ + +E
Sbjct: 505 SGIATAFFNENNAQLARSLAELMQEANQE 533
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 486 (176.1 bits), Expect = 8.2e-46, P = 8.2e-46
Identities = 121/366 (33%), Positives = 183/366 (50%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
D +TF + L+ ++ +G ++PTP+Q C+P L GKD+ A TG+GKTAAF L
Sbjct: 198 DENLTFHDMNLSRPLLKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFML 257
Query: 117 PILHRLAEDPYGVLA---LVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
P+L RL P LV+ PTREL Q+ + L + + VGG+DL +Q
Sbjct: 258 PVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKSQEA 317
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
+L P V+IATPGR+ L P S+ + L+LDEADR+LD FEE+++ + +
Sbjct: 318 ALRAGPDVLIATPGRLIDHLHNTPSFE--LSQIEILILDEADRMLDEYFEEQMKEIIRMC 375
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
RQT+LFSATM+ +++ L +S + L+Q+++ I N +
Sbjct: 376 AYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREA 435
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
V + + ++F T + H + LH SQ+QRL +L RFK
Sbjct: 436 IVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDE 495
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
Q IL+ATDVA+RGLDI V V+N+ +P + Y S V + +
Sbjct: 496 QIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETER 555
Query: 414 DLIHEI 419
++ EI
Sbjct: 556 KMLKEI 561
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 128/392 (32%), Positives = 202/392 (51%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-------HRLA----E 124
K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++ RL E
Sbjct: 197 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 125 DPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVVGGMDLLTQAKSLMNR 178
PYG L+I P+RELA Q + E + L S LRC + +GGM + Q +++ +
Sbjct: 257 GPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHG 313
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ATPGR+ LL++ + ++L LDEADR++D+GFE ++R +F RQ
Sbjct: 314 VHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
TLLFSATM +Q + + K G +++ + Q+ ++ + K VYL+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEYVKEEAKMVYLLECLQ 429
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
K +IF EAVA+H K Q +R A+ F+ G+ +
Sbjct: 430 KTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDV 485
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN-DVDLI 416
L+ATDVAS+GLD P + V+NYD+P +Y +F+ + D ++
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 545
Query: 417 HEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+++A++ KQ L+ C ++ +L DI
Sbjct: 546 MDLKALLLEAKQKVPPVLQVLHCGDESML-DI 576
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 128/392 (32%), Positives = 202/392 (51%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-------HRLA----E 124
K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++ RL E
Sbjct: 224 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 283
Query: 125 DPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVVGGMDLLTQAKSLMNR 178
PYG L+I P+RELA Q + E + L S LRC + +GGM + Q +++ +
Sbjct: 284 GPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHG 340
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ATPGR+ LL++ + ++L LDEADR++D+GFE ++R +F RQ
Sbjct: 341 VHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 397
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
TLLFSATM +Q + + K G +++ + Q+ ++ + K VYL+ L
Sbjct: 398 TLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEYVKEEAKMVYLLECLQ 456
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
K +IF EAVA+H K Q +R A+ F+ G+ +
Sbjct: 457 KTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDV 512
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN-DVDLI 416
L+ATDVAS+GLD P + V+NYD+P +Y +F+ + D ++
Sbjct: 513 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 572
Query: 417 HEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+++A++ KQ L+ C ++ +L DI
Sbjct: 573 MDLKALLLEAKQKVPPVLQVLHCGDESML-DI 603
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 128/392 (32%), Positives = 202/392 (51%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-------HRLA----E 124
K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++ RL E
Sbjct: 215 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 274
Query: 125 DPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVVGGMDLLTQAKSLMNR 178
PYG L+I P+RELA Q + E + L S LRC + +GGM + Q +++ +
Sbjct: 275 GPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHG 331
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ATPGR+ LL++ + ++L LDEADR++D+GFE ++R +F RQ
Sbjct: 332 VHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 388
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
TLLFSATM +Q + + K G +++ + Q+ ++ + K VYL+ L
Sbjct: 389 TLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEYVKEEAKMVYLLECLQ 447
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
K +IF EAVA+H K Q +R A+ F+ G+ +
Sbjct: 448 KTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDV 503
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN-DVDLI 416
L+ATDVAS+GLD P + V+NYD+P +Y +F+ + D ++
Sbjct: 504 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 563
Query: 417 HEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+++A++ KQ L+ C ++ +L DI
Sbjct: 564 MDLKALLLEAKQKVPPVLQVLHCGDESML-DI 594
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 128/392 (32%), Positives = 202/392 (51%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-------HRLA----E 124
K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++ RL E
Sbjct: 197 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 125 DPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVVGGMDLLTQAKSLMNR 178
PYG L+I P+RELA Q + E + L S LRC + +GGM + Q +++ +
Sbjct: 257 GPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHG 313
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ATPGR+ LL++ + ++L LDEADR++D+GFE ++R +F RQ
Sbjct: 314 VHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
TLLFSATM +Q + + K G +++ + Q+ ++ + K VYL+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEYVKEEAKMVYLLECLQ 429
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
K +IF EAVA+H K Q +R A+ F+ G+ +
Sbjct: 430 KTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDV 485
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN-DVDLI 416
L+ATDVAS+GLD P + V+NYD+P +Y +F+ + D ++
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 545
Query: 417 HEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+++A++ KQ L+ C ++ +L DI
Sbjct: 546 MDLKALLLEAKQKVPPVLQVLHCGDESML-DI 576
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 124/377 (32%), Positives = 188/377 (49%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F+ L L V T ELG ++PTP+Q IP IL +DV+ AQTG+GKTAAFALPIL
Sbjct: 1 MSFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPIL 60
Query: 120 HRLAEDPYG------VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
L D + ALV+ PTRELA Q+ + F G +R + GG+ + Q +
Sbjct: 61 QLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQ-Q 119
Query: 174 SLMNRP-HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQC 232
++ N V+IATPGR LL+ ++ LV DEADR+LD+GF +E++ V +
Sbjct: 120 AVFNAGIDVLIATPGR---LLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQ 176
Query: 233 LPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYL 292
+P RQTLLFSAT+ + + + E + T ++Q+ I + K ++
Sbjct: 177 VPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEFV 236
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
H++ + +IF T + + H SQ R L FK
Sbjct: 237 SHLV---RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQ 293
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G +L+ATDVA+RGLDI + V+N+++P DY + +Q D
Sbjct: 294 GLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQED 353
Query: 413 VDLIHEIEAVVGKQLEE 429
L+ E+E ++ K+L +
Sbjct: 354 ALLLEEVETLLDKRLPQ 370
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 124/377 (32%), Positives = 188/377 (49%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F+ L L V T ELG ++PTP+Q IP IL +DV+ AQTG+GKTAAFALPIL
Sbjct: 1 MSFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPIL 60
Query: 120 HRLAEDPYG------VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
L D + ALV+ PTRELA Q+ + F G +R + GG+ + Q +
Sbjct: 61 QLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQ-Q 119
Query: 174 SLMNRP-HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQC 232
++ N V+IATPGR LL+ ++ LV DEADR+LD+GF +E++ V +
Sbjct: 120 AVFNAGIDVLIATPGR---LLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQ 176
Query: 233 LPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYL 292
+P RQTLLFSAT+ + + + E + T ++Q+ I + K ++
Sbjct: 177 VPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEFV 236
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
H++ + +IF T + + H SQ R L FK
Sbjct: 237 SHLV---RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQ 293
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G +L+ATDVA+RGLDI + V+N+++P DY + +Q D
Sbjct: 294 GLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQED 353
Query: 413 VDLIHEIEAVVGKQLEE 429
L+ E+E ++ K+L +
Sbjct: 354 ALLLEEVETLLDKRLPQ 370
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 485 (175.8 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 119/338 (35%), Positives = 173/338 (51%)
Query: 50 DPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSG 109
D ++ T + +F L+ ++ + PTP+Q IP L GKD++G A TGSG
Sbjct: 288 DEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSG 347
Query: 110 KTAAFALPILHRLAEDPYGV---LALVITPTRELAYQLAEQFKALGSGLHLR-CEVVVGG 165
KTAAF +PIL RL P V ++ PTRELA Q L + + C++V GG
Sbjct: 348 KTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLV-GG 406
Query: 166 MDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE 225
L Q L RP V+IATPGR + + LVLDEADR+L+ GF +E
Sbjct: 407 FSLREQENVLKKRPDVIIATPGRFIDHMRNSASF--TVDTLEILVLDEADRMLEDGFADE 464
Query: 226 LRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPK 285
L + +PK+RQT+LFSATMT + L+ + N+ T TL Q+++ +
Sbjct: 465 LNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVTLVQEFVRLRP 524
Query: 286 NVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLS 345
+D L ++L +++ I+F + H +A LH SQ QR+
Sbjct: 525 GREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIK 584
Query: 346 ALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPR 383
++ F+ G LLATD+ASRGLDI V+ V+NY+ P+
Sbjct: 585 SVESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQ 622
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 486 (176.1 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 125/390 (32%), Positives = 202/390 (51%)
Query: 9 RNFPLFAKPKSKTRSKXXXXXXXXXXSKN--AKTTQLEKFTNPDPNSTTTDSTVTFAGLG 66
+NF + K +KT++K ++ + ++K + ++ V F+
Sbjct: 18 KNFEKWKKKYAKTKTKVKRSQKSKVKKRDWEVERENIKKLVDKYSEINPKEA-VKFSDFP 76
Query: 67 LAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDP 126
L++ ++ E R+PT +Q I L+G+DVLG A+TGSGKT AF +P+L L +
Sbjct: 77 LSKKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECLYREQ 136
Query: 127 Y----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVV 182
+ G+ AL+I+PTRELAYQ E + +G +V+GG DL +++ + +R +++
Sbjct: 137 WTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDLKDESEKI-HRTNII 195
Query: 183 IATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLF 242
I TPGR+ ++E S LVLDEADR+LD+GF + L + + LPK+RQTLLF
Sbjct: 196 ICTPGRLLQHMDETATFHA--SDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLF 253
Query: 243 SATMTSDLQTLLELSANKAYFYEAYEG--FKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
SAT T ++ L LS + +E F T TL+Q Y+ + K V +++ S +
Sbjct: 254 SATQTRSVKDLARLSLKDPEYVWVHEQAKFSTPATLEQNYVVCELHQK-VNMLY--SFLR 310
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRFKSGQATIL 358
+ I+F + C+ +ALH + Q +R+ + F + +L
Sbjct: 311 SHLQKKIIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMKRVEVYNDFVRKTSAVL 370
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
ATD+A+RGLD P V+ VL +D P Y
Sbjct: 371 FATDIAARGLDFPAVNWVLQFDCPEDANTY 400
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 126/389 (32%), Positives = 200/389 (51%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-------HRLA----E 124
K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++ RL E
Sbjct: 197 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 125 DPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVVGGMDLLTQAKSLMNR 178
PYG L+I P+RELA Q + E + L S LRC + +GGM + Q +++ +
Sbjct: 257 GPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHG 313
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ATPGR+ LL++ + ++L LDEADR++D+GFE ++R +F RQ
Sbjct: 314 VHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
TLLFSATM +Q + + K G +++ + Q+ ++ + K VYL+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEYVKEEAKMVYLLECLQ 429
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
K +IF EAVA+H K Q +R A+ F+ G+ +
Sbjct: 430 KTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDV 485
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN-DVDLI 416
L+ATDVAS+GLD P + V+NYD+P +Y +F+ + D ++
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 545
Query: 417 HEIEAVV--GKQ-----LEEFECKEQEVL 438
+++A++ KQ L+ C ++ +L
Sbjct: 546 MDLKALLLEAKQKVPPVLQVLHCGDESML 574
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 130/407 (31%), Positives = 208/407 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL- 119
+F + L ++ K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++
Sbjct: 182 SFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
Query: 120 ------HRLA----EDPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVV 163
RL E PYG L+I P+RELA Q + E + L S LRC + +
Sbjct: 242 FCLEQEKRLPFSKREGPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCI 298
Query: 164 GGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFE 223
GGM + Q +++ + H+++ATPGR+ LL++ + ++L LDEADR++D+GFE
Sbjct: 299 GGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFE 355
Query: 224 EELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIF 282
++R +F RQTLLFSATM +Q + + K G +++ + Q+ +
Sbjct: 356 GDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEY 414
Query: 283 IPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQ 342
+ + K VYL+ L K +IF EAVA+H K Q +
Sbjct: 415 VKEEAKMVYLLECLQKTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 470
Query: 343 RLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXX 402
R A+ F+ G+ +L+ATDVAS+GLD P + V+NYD+P +Y
Sbjct: 471 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTG 530
Query: 403 XXXSFVTQN-DVDLIHEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+F+ + D ++ +++A++ KQ L+ C ++ +L DI
Sbjct: 531 IATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESML-DI 576
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 114/371 (30%), Positives = 188/371 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
+L SATM SD+ L K + + T+E ++Q YI + + + + + L +
Sbjct: 210 VLLSATMPSDV-----LEVTKKFMRDPIRIXLTLEGIRQFYINVER---EEWKLDTLCDL 261
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D A+H Q +R + F+SG + +L
Sbjct: 262 YETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 321
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D + +
Sbjct: 322 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 381
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 382 IETFYNTSIEE 392
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 128/392 (32%), Positives = 202/392 (51%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-------HRLA----E 124
K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++ RL E
Sbjct: 197 KKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 125 DPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVVGGMDLLTQAKSLMNR 178
PYG L+I P+RELA Q + E + L S LRC + +GGM + Q +++ +
Sbjct: 257 GPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHG 313
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ATPGR+ LL++ + ++L LDEADR++D+GFE ++R +F RQ
Sbjct: 314 VHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
TLLFSATM +Q + + K G +++ + Q+ ++ + K VYL+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEYVKEEAKMVYLLECLQ 429
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
K +IF EAVA+H K Q +R A+ F+ G+ +
Sbjct: 430 KTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDV 485
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN-DVDLI 416
L+ATDVAS+GLD P + V+NYD+P +Y +F+ + D ++
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 545
Query: 417 HEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+++A++ KQ L+ C ++ +L DI
Sbjct: 546 MDLKALLLEAKQKVPPVLQVLHCGDESML-DI 576
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 390 (142.3 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 95/304 (31%), Positives = 159/304 (52%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F GL++ + K G R+PTP+Q IP IL+ +D++G+A+TGSGKTAAF LP++
Sbjct: 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197
Query: 121 RLAEDP--YGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNR 178
+L G A++++P+RELA Q FK G LR ++ GG L Q +M
Sbjct: 198 KLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTN 257
Query: 179 PHVVIATPGR-IKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
P V+IATPGR + + +E + D+ V +++V DEADR+ ++GF+E+L + LP R
Sbjct: 258 PDVIIATPGRFLHLKVEMNLDLKSV----EYVVFDEADRLFEMGFQEQLNELLASLPTTR 313
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
QTLLFSAT+ + L ++ K E L+ ++ ++ L+++L
Sbjct: 314 QTLLFSATLPNSLVDFVKAGLVNPVLVRLDAETKVSENLEMLFLSSKNADREANLLYILQ 373
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQS---QRLSALHRFKSGQ 354
++ + + ++ S + + +FK + Q++ A + S +
Sbjct: 374 EIIKIPLATSEQLQKLQNSNNEADSDSDDENDRQKKRRNFKKEKFRKQKMPAANELPSEK 433
Query: 355 ATIL 358
ATIL
Sbjct: 434 ATIL 437
Score = 125 (49.1 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 340 QSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXX 399
Q R L+ F++G +IL+ TDVA+RG+DIP + V+NY +P + +
Sbjct: 468 QHARKRQLYNFRAGLTSILVVTDVAARGVDIPMLANVINYTLPGSSKIFVHRVGRTARAG 527
Query: 400 XXXXXXSFVTQNDVDLIHEIEAVVGKQL 427
S V +N++ + ++E +GK++
Sbjct: 528 NKGWAYSIVAENELPYLLDLELFLGKKI 555
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 128/392 (32%), Positives = 204/392 (52%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-------HRLA----E 124
K+ G+++PTP+Q IP IL G+D++G+A TGSGKT F LP++ RL E
Sbjct: 193 KKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 252
Query: 125 DPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVVGGMDLLTQAKSLMNR 178
PYG L+I P+RELA Q + E + L S LRC + +GGM + Q +++ +
Sbjct: 253 GPYG---LIICPSRELARQTHGIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKHG 309
Query: 179 PHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
H+++ATPGR+ LL++ + ++L LDEADR++D+GFE ++R +F RQ
Sbjct: 310 VHMMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 366
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLS 297
TLLFSATM +Q + + K G +++ + Q+ ++ + K VYL+ L
Sbjct: 367 TLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVV-QEVEYVKEEAKMVYLLECLQ 425
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
K +IF EAVA+H K Q +R A+ F+ G+ +
Sbjct: 426 KTPP----PVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDV 481
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN-DVDLI 416
L+ATDVAS+GLD P + V+NYD+P +Y +F+ + D ++
Sbjct: 482 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 541
Query: 417 HEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+++A++ KQ L+ C ++ +L DI
Sbjct: 542 MDLKALLLEAKQKVPPVLQVLHCGDETML-DI 572
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 123/380 (32%), Positives = 188/380 (49%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F+ L L ++ +E G PTP+Q IP LEG+DVLG+AQTG+GKTA+F LP++
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITL 63
Query: 122 LAEDPYGVL---ALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNR 178
LA +LV+ PTRELA Q+AE F L L +++GG+ Q +L++R
Sbjct: 64 LARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQ-DALIDR 122
Query: 179 P-HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
V+IATPGR LL+ + + + +V+DEADR+LD+GF ++ +F P R
Sbjct: 123 GVDVLIATPGR---LLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTR 179
Query: 238 QTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY------ 291
QTL FSATM +++ + + E ET++Q + + +D
Sbjct: 180 QTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRA 239
Query: 292 LMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
++ L E +AIIF + +A +H QSQR L F+
Sbjct: 240 VLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFR 299
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
G+ +L+A+DVA+RGLD+P+V V N+D+P +P DY +
Sbjct: 300 EGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPR 359
Query: 412 DVDLIHEIEAVVGKQLEEFE 431
D + IE ++ K + E
Sbjct: 360 DEKALDAIEKLIQKDIPRLE 379
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 123/355 (34%), Positives = 184/355 (51%)
Query: 76 KELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP-ILHRLAED---PY---- 127
K+ G+ PTP+Q +P +L G+D++G+A TGSGKT F LP I+ L E+ P
Sbjct: 113 KDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGE 172
Query: 128 GVLALVITPTRELA---YQLAEQFKA--LGSGL-HLRCEVVVGGMDLLTQAKSLMNRPHV 181
G +ALVI P+RELA Y + EQF A + G LR + +GG+D+ +Q + H+
Sbjct: 173 GPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHI 232
Query: 182 VIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 241
V+ATPGR+K +L + + L LDEADR++D+GFE+++R VF RQTLL
Sbjct: 233 VVATPGRLKDILAKKK---MSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLL 289
Query: 242 FSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPKNVKDVYLMHVLSKME 300
FSATM + +Q + K G ++ + Q+ ++ + K VYL+ L K
Sbjct: 290 FSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVI-QEVEYVKQEAKIVYLLECLQKTT 348
Query: 301 DMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLA 360
+IF EAVA+H K Q R A+ FK+G+ +L+A
Sbjct: 349 P----PVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVA 404
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
TDVAS+GLD P + V+NYD+P +Y +F+ +N ++
Sbjct: 405 TDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEI 459
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 363 (132.8 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 93/294 (31%), Positives = 155/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 267 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 326
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 327 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 383
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ ++ K +L+ +L+ +
Sbjct: 384 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSL- 442
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 443 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 501
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 502 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 555
Score = 142 (55.0 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 201 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPG 247
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 363 (132.8 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 93/294 (31%), Positives = 155/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 268 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 327
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 328 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ ++ K +L+ +L+ +
Sbjct: 385 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSL- 443
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 444 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 502
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556
Score = 142 (55.0 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 202 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPG 248
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 363 (132.8 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 93/294 (31%), Positives = 155/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 268 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 327
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 328 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ ++ K +L+ +L+ +
Sbjct: 385 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSL- 443
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 444 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 502
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556
Score = 142 (55.0 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 202 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPG 248
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 129/407 (31%), Positives = 207/407 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL- 119
+F + L ++ K+ G+ PTP+Q IP IL G+D++G+A TGSGKT F LP++
Sbjct: 181 SFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 240
Query: 120 ------HRLA----EDPYGVLALVITPTRELAYQ---LAEQFKAL---GSGLHLRCEVVV 163
RL E PYG L+I P+RELA Q + E + L S L C + +
Sbjct: 241 FCLEQEKRLPFSKREGPYG---LIICPSRELARQTHGILEYYCRLLQEDSSPLLHCALCI 297
Query: 164 GGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFE 223
GG+ L Q +++ + H+++ATPGR+ LL++ + ++L LDEADR++D+GFE
Sbjct: 298 GGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLDI---CRYLALDEADRMIDMGFE 354
Query: 224 EELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIF 282
++R +F RQTLLFSATM +Q + + K G +++ + Q+ +
Sbjct: 355 GDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI-QEVEY 413
Query: 283 IPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQ 342
+ + K VYL+ L K +IF EAVA+H K Q +
Sbjct: 414 VKEEAKMVYLLECLQKTPP----PVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 469
Query: 343 RLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXX 402
R A+ F+ G+ +L+ATDVAS+GLD P + V+NYD+P +Y
Sbjct: 470 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTG 529
Query: 403 XXXSFVTQN-DVDLIHEIEAVV--GKQ-----LEEFECKEQEVLSDI 441
+F+ + D ++ +++A++ KQ L+ C ++ +L DI
Sbjct: 530 IATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESML-DI 575
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 117/334 (35%), Positives = 183/334 (54%)
Query: 52 NSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKT 111
++ TT S++ F+ L L + V+ LG + TP+Q +P++L+GKDV+G A+TGSGKT
Sbjct: 2 STNTTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKT 61
Query: 112 AAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLT 170
AAF L +L++L + + ++VI PTRELA Q+A++ + L G+H ++ + GG
Sbjct: 62 AAFGLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGP 121
Query: 171 QAKSLMNRPHVVIATPGRIKVLLEEDPDIPPV-FSRTKFLVLDEADRVLDVGFEEELRVV 229
Q SL + HV++ TPGR LEE + LVLDEADR+L++GF+ L +
Sbjct: 122 QIGSLEHGAHVIVGTPGR----LEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNI 177
Query: 230 FQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKD 289
P +RQTLLFSAT ++++ E + + T+ Q++ + +
Sbjct: 178 VGRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASS-EDQSTISQKFFKVGNDDDR 236
Query: 290 VYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHR 349
+ + +L + + S IF +T + +ALH Q R L R
Sbjct: 237 LDALRLL--LLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLR 294
Query: 350 FKSGQATILLATDVASRGLDIPTVDLVLNYDIPR 383
F + A+IL+ATDVA+RGLDI ++DLV+NY I R
Sbjct: 295 FANKSASILVATDVAARGLDIDSLDLVINYHIAR 328
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 117/334 (35%), Positives = 183/334 (54%)
Query: 52 NSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKT 111
++ TT S++ F+ L L + V+ LG + TP+Q +P++L+GKDV+G A+TGSGKT
Sbjct: 2 STNTTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKT 61
Query: 112 AAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLT 170
AAF L +L++L + + ++VI PTRELA Q+A++ + L G+H ++ + GG
Sbjct: 62 AAFGLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGP 121
Query: 171 QAKSLMNRPHVVIATPGRIKVLLEEDPDIPPV-FSRTKFLVLDEADRVLDVGFEEELRVV 229
Q SL + HV++ TPGR LEE + LVLDEADR+L++GF+ L +
Sbjct: 122 QIGSLEHGAHVIVGTPGR----LEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNI 177
Query: 230 FQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKD 289
P +RQTLLFSAT ++++ E + + T+ Q++ + +
Sbjct: 178 VGRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASS-EDQSTISQKFFKVGNDDDR 236
Query: 290 VYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHR 349
+ + +L + + S IF +T + +ALH Q R L R
Sbjct: 237 LDALRLL--LLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLR 294
Query: 350 FKSGQATILLATDVASRGLDIPTVDLVLNYDIPR 383
F + A+IL+ATDVA+RGLDI ++DLV+NY I R
Sbjct: 295 FANKSASILVATDVAARGLDIDSLDLVINYHIAR 328
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 135/401 (33%), Positives = 203/401 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI--- 118
F+ L E ++ K +PTPVQ + IP + +G+D++ AQTGSGKT F P+
Sbjct: 156 FSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTE 215
Query: 119 LHRLAEDP--------YG----VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGM 166
L R P Y ALV+ PTRELA Q+ E+ + +R VV GG
Sbjct: 216 LFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGA 275
Query: 167 DLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEEL 226
+ Q + + +++ATPGR+ LLE + K+LVLDEADR+LD+GFE ++
Sbjct: 276 PIGNQMREVDRGCDLLVATPGRLNDLLERGK---VSLANIKYLVLDEADRMLDMGFEPQI 332
Query: 227 R-VVFQC-LP--KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIF 282
R +V +C +P +NRQTL+FSAT D+Q L + F T E + Q+ ++
Sbjct: 333 RHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILY 392
Query: 283 IPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQ 342
+ K L+ +LS E G+ +IFV T R + +A A+H ++Q++
Sbjct: 393 VDDMDKKSALLDLLSA-EHKGL--TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
Query: 343 RLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXX 402
R AL FK+ A IL+AT VA+RGLDIP V V+NYD+P DY
Sbjct: 450 RERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTG 509
Query: 403 XXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITR 443
SF N+ +++ + ++ + +E LSD++R
Sbjct: 510 VATSFFNSNNQNIVKGLMEILNEANQEVPT----FLSDLSR 546
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 120/377 (31%), Positives = 192/377 (50%)
Query: 57 DSTV-TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFA 115
D V +F + L E ++ G +P+ +Q I GKDV+ AQ+G+GKTA F+
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFS 84
Query: 116 LPILHRLA-EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 174
+ IL R+ EDP+ V ALV+ PTRELA Q+ + ALG L++ +GG + +
Sbjct: 85 VSILQRIDHEDPH-VQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
Query: 175 LMNRPHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L HVV+ TPGR+ ++ + D SR K VLDEAD +L GF++++ VF+ +
Sbjct: 144 LEAGIHVVVGTPGRVGDMINRNALDT----SRIKMFVLDEADEMLSRGFKDQIYEVFRSM 199
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLM 293
P++ Q +L SATM S++ + + T+E ++Q YI + K D +
Sbjct: 200 PQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQK---DEWKF 256
Query: 294 HVLSKMEDM-GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
L + ++ + A+IF +T R LH Q++R + + F+S
Sbjct: 257 DCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRS 316
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G + +L+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ND
Sbjct: 317 GSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND 376
Query: 413 VDLIHEIEAVVGKQLEE 429
+ EIE+ Q+EE
Sbjct: 377 ARQLKEIESYYTTQIEE 393
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 129/394 (32%), Positives = 194/394 (49%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
+TF+ L ++ E PT +Q IP IL DV+ AQTG+GKTAAFALPIL
Sbjct: 5 MTFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPIL 64
Query: 120 HRLAE-DPYG--VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
+L P + ALV+TPTRELA Q+ + F G + + GG+ Q L
Sbjct: 65 QQLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELK 124
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
++IATPGR+ LL + S + LV DEADR+LD+GF+EE+ + Q LPK
Sbjct: 125 VGVDILIATPGRLLDLLRTES---VSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKT 181
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
+QTLLFSAT D+ + + + E E K + ++Q + + K ++
Sbjct: 182 KQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLI 241
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ-EAVALHSFKSQSQRLSALHRFKSGQA 355
+ ++F T + C D +++A+H KSQ R ALH FK G+
Sbjct: 242 GSRN---WKQVLVFTRT-KQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKV 297
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
L+ATDVA+RG+DI + V+NY++P DY S V+ + L
Sbjct: 298 RALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWL 357
Query: 416 IHEIEAVVGKQLEEFECKEQEVLSDITRVYKARR 449
+ IE ++ QL + E+ D+T++ + +
Sbjct: 358 LTAIEELLDIQLLQQWLPGYEL--DLTKIANSNK 389
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 129/394 (32%), Positives = 194/394 (49%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
+TF+ L ++ E PT +Q IP IL DV+ AQTG+GKTAAFALPIL
Sbjct: 5 MTFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPIL 64
Query: 120 HRLAE-DPYG--VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM 176
+L P + ALV+TPTRELA Q+ + F G + + GG+ Q L
Sbjct: 65 QQLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELK 124
Query: 177 NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKN 236
++IATPGR+ LL + S + LV DEADR+LD+GF+EE+ + Q LPK
Sbjct: 125 VGVDILIATPGRLLDLLRTES---VSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKT 181
Query: 237 RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
+QTLLFSAT D+ + + + E E K + ++Q + + K ++
Sbjct: 182 KQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLI 241
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ-EAVALHSFKSQSQRLSALHRFKSGQA 355
+ ++F T + C D +++A+H KSQ R ALH FK G+
Sbjct: 242 GSRN---WKQVLVFTRT-KQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKV 297
Query: 356 TILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDL 415
L+ATDVA+RG+DI + V+NY++P DY S V+ + L
Sbjct: 298 RALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWL 357
Query: 416 IHEIEAVVGKQLEEFECKEQEVLSDITRVYKARR 449
+ IE ++ QL + E+ D+T++ + +
Sbjct: 358 LTAIEELLDIQLLQQWLPGYEL--DLTKIANSNK 389
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 115/379 (30%), Positives = 190/379 (50%)
Query: 54 TTTDSTV-TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
T D + TF + L ++ G RP+ +Q I IL +DVL AQ+G+GKTA
Sbjct: 12 TNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTA 71
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F++ +L ++ AL++ PTRELA Q+ + ALG +++ C +GG +
Sbjct: 72 TFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDM 131
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQC 232
+L HVV+ TPGR+ +++ +P + VLDEAD +L GF++++ +FQ
Sbjct: 132 AALQAGVHVVVGTPGRVHDMIQRRA-LPT--DAVQMFVLDEADEMLSRGFKDQIYDIFQL 188
Query: 233 LPKNRQTLLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP Q +L SATM D L+ + + + T+E +KQ Y+ + K + +
Sbjct: 189 LPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDEL-TLEGIKQFYVAVEK---EEW 244
Query: 292 LMHVLSKM-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
+ L + E + + A+IF +T R D ++H Q+QR + +H F
Sbjct: 245 KLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEF 304
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
++G + IL+ TD+ +RG+D+ V LV+NYD+P +Y +FVT
Sbjct: 305 RTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTN 364
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+DV ++ EIE +EE
Sbjct: 365 DDVRMMREIEQFYNTHIEE 383
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 112/339 (33%), Positives = 186/339 (54%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F +G ++ ++ K+ G PTP+Q+ P ++G+D++G+A+TGSGKT ++ LP +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 121 RLAEDPY-----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+ P G + LV+ PTRELA Q+ ++ GS ++ + GG+ Q + L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
+VIATPGR+ ++E + R +LVLDEADR+LD+GF+ ++R + +
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTN---LRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRP 276
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYE---G---FKTVETLKQQYIFIPKNVKD 289
+RQTL +SAT +++ L +K + Y Y+ G K ++Q I ++ K
Sbjct: 277 DRQTLYWSATWPKEVEQL-----SKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKY 331
Query: 290 VYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHR 349
L+ +L + D G R ++F+ T + C A+++H KSQ++R L
Sbjct: 332 NKLVKLLEDIMD-GSR-ILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSE 389
Query: 350 FKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
F+SG++ I+ ATDVA+RGLD+ V V+NYD P DY
Sbjct: 390 FRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDY 428
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 128/391 (32%), Positives = 199/391 (50%)
Query: 61 TFAGLGLAEWA---VQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP 117
TFA + L E +Q CK + +PTPVQ + IP + G+D++ AQTGSGKTAAF P
Sbjct: 147 TFAEIDLGEALNLNIQRCKYV---KPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFP 203
Query: 118 ILHRLAED-----PYGV-----LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 167
I+ + +D P GV LA++++PTRELA Q+ ++ + ++ V GG
Sbjct: 204 IISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTP 263
Query: 168 LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR 227
+ Q + L +++ATPGR+ LLE +FL LDEADR+LD+GFE ++R
Sbjct: 264 VNQQIRELERGVDILVATPGRLNDLLERGR---VSLQMVRFLALDEADRMLDMGFEPQIR 320
Query: 228 VVFQCL----PKNRQTLLFSATMTSDLQTLL-ELSANKAYFYEAYEGFKTVETLKQQYIF 282
+ Q + P RQT+LFSAT ++Q L + +N + G T + + Q+ F
Sbjct: 321 KIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSST-DLIVQRVEF 379
Query: 283 IPKNVKDVYLMHVLSKMEDMGIRS----AIIFVSTCRSCHXXXXXXXXXDQEAVALHSFK 338
+ + K +LM +L + G + ++FV T + A +H +
Sbjct: 380 VHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDR 439
Query: 339 SQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXX 398
SQ +R AL FK+G+ IL+ATDVA+RGLDIP V V+N+D+P DY
Sbjct: 440 SQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRA 499
Query: 399 XXXXXXXSFVTQNDVDLIHEIEAVVGKQLEE 429
+F N+ + + ++ + +E
Sbjct: 500 GNSGLATAFFNDNNTTMAKPLAELMQEANQE 530
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 359 (131.4 bits), Expect = 7.2e-45, Sum P(2) = 7.2e-45
Identities = 93/294 (31%), Positives = 154/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 245 ISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 304
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 305 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 361
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 362 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSL- 420
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 421 -TLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 479
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 480 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 533
Score = 142 (55.0 bits), Expect = 7.2e-45, Sum P(2) = 7.2e-45
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F+ + + E + + RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL
Sbjct: 157 SFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS 216
Query: 121 RLAEDPYG 128
++ D G
Sbjct: 217 QIYADGPG 224
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 359 (131.4 bits), Expect = 7.4e-45, Sum P(2) = 7.4e-45
Identities = 93/294 (31%), Positives = 154/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 246 ISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 305
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 306 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 362
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 363 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSL- 421
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 422 -TLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 480
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 481 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 534
Score = 142 (55.0 bits), Expect = 7.4e-45, Sum P(2) = 7.4e-45
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F+ + + E + + RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL
Sbjct: 159 SFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS 218
Query: 121 RLAEDPYG 128
++ D G
Sbjct: 219 QIYADGPG 226
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 360 (131.8 bits), Expect = 7.6e-45, Sum P(2) = 7.6e-45
Identities = 93/294 (31%), Positives = 154/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 268 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 327
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 328 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ ++ K +L+ +L+ +
Sbjct: 385 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSL- 443
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 444 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 502
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + + ++ ++
Sbjct: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNANITKDL 556
Score = 142 (55.0 bits), Expect = 7.6e-45, Sum P(2) = 7.6e-45
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 202 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPG 248
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 481 (174.4 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 126/388 (32%), Positives = 200/388 (51%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H---- 120
G++ + + K+ G +PTP+QT IP I+ G+D++G+A+TGSGKT AF LP+ H
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLPKNRQT 239
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P +RQT
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP-DRQT 556
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
++FSAT ++ L +K E G ++V ++QQ I I + K + L+ +L
Sbjct: 557 VMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG 614
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ G S IIFV ++LH Q R S ++ FK+G +
Sbjct: 615 HYQESG--SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 672
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 673 LVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAG 732
Query: 414 DLIHEIE---AVVGKQLEEF--ECKEQE 436
D+I +E V LE+ + K+Q+
Sbjct: 733 DIIKALELSGTAVPPDLEKLWSDFKDQQ 760
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 481 (174.4 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 126/388 (32%), Positives = 200/388 (51%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H---- 120
G++ + + K+ G +PTP+QT IP I+ G+D++G+A+TGSGKT AF LP+ H
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLPKNRQT 239
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P +RQT
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP-DRQT 556
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
++FSAT ++ L +K E G ++V ++QQ I I + K + L+ +L
Sbjct: 557 VMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG 614
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ G S IIFV ++LH Q R S ++ FK+G +
Sbjct: 615 HYQESG--SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 672
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 673 LVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAG 732
Query: 414 DLIHEIE---AVVGKQLEEF--ECKEQE 436
D+I +E V LE+ + K+Q+
Sbjct: 733 DIIKALELSGTAVPPDLEKLWSDFKDQQ 760
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 481 (174.4 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 126/388 (32%), Positives = 200/388 (51%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H---- 120
G++ + + K+ G +PTP+QT IP I+ G+D++G+A+TGSGKT AF LP+ H
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLPKNRQT 239
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P +RQT
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP-DRQT 556
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
++FSAT ++ L +K E G ++V ++QQ I I + K + L+ +L
Sbjct: 557 VMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG 614
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ G S IIFV ++LH Q R S ++ FK+G +
Sbjct: 615 HYQESG--SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 672
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 673 LVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAG 732
Query: 414 DLIHEIE---AVVGKQLEEF--ECKEQE 436
D+I +E V LE+ + K+Q+
Sbjct: 733 DIIKALELSGTAVPPDLEKLWSDFKDQQ 760
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 481 (174.4 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 126/388 (32%), Positives = 200/388 (51%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H---- 120
G++ + + K+ G +PTP+QT IP I+ G+D++G+A+TGSGKT AF LP+ H
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLPKNRQT 239
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P +RQT
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP-DRQT 556
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
++FSAT ++ L +K E G ++V ++QQ I I + K + L+ +L
Sbjct: 557 VMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG 614
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ G S IIFV ++LH Q R S ++ FK+G +
Sbjct: 615 HYQESG--SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 672
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 673 LVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAG 732
Query: 414 DLIHEIE---AVVGKQLEEF--ECKEQE 436
D+I +E V LE+ + K+Q+
Sbjct: 733 DIIKALELSGTAVPPDLEKLWSDFKDQQ 760
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 481 (174.4 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 126/388 (32%), Positives = 200/388 (51%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H---- 120
G++ + + K+ G +PTP+QT IP I+ G+D++G+A+TGSGKT AF LP+ H
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLPKNRQT 239
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P +RQT
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP-DRQT 556
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
++FSAT ++ L +K E G ++V ++QQ I I + K + L+ +L
Sbjct: 557 VMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG 614
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ G S IIFV ++LH Q R S ++ FK+G +
Sbjct: 615 HYQESG--SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 672
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 673 LVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAG 732
Query: 414 DLIHEIE---AVVGKQLEEF--ECKEQE 436
D+I +E V LE+ + K+Q+
Sbjct: 733 DIIKALELSGTAVPPDLEKLWSDFKDQQ 760
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 481 (174.4 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 126/388 (32%), Positives = 200/388 (51%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H---- 120
G++ + + K+ G +PTP+QT IP I+ G+D++G+A+TGSGKT AF LP+ H
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLPKNRQT 239
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P +RQT
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP-DRQT 556
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
++FSAT ++ L +K E G ++V ++QQ I I + K + L+ +L
Sbjct: 557 VMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG 614
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ G S IIFV ++LH Q R S ++ FK+G +
Sbjct: 615 HYQESG--SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 672
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 673 LVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAG 732
Query: 414 DLIHEIE---AVVGKQLEEF--ECKEQE 436
D+I +E V LE+ + K+Q+
Sbjct: 733 DIIKALELSGTAVPPDLEKLWSDFKDQQ 760
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 481 (174.4 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 126/388 (32%), Positives = 200/388 (51%)
Query: 66 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-H---- 120
G++ + + K+ G +PTP+QT IP I+ G+D++G+A+TGSGKT AF LP+ H
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLPKNRQT 239
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P +RQT
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP-DRQT 556
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLS 297
++FSAT ++ L +K E G ++V ++QQ I I + K + L+ +L
Sbjct: 557 VMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG 614
Query: 298 KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
++ G S IIFV ++LH Q R S ++ FK+G +
Sbjct: 615 HYQESG--SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 672
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV---- 413
L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 673 LVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAG 732
Query: 414 DLIHEIE---AVVGKQLEEF--ECKEQE 436
D+I +E V LE+ + K+Q+
Sbjct: 733 DIIKALELSGTAVPPDLEKLWSDFKDQQ 760
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 478 (173.3 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 113/369 (30%), Positives = 189/369 (51%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F +GL+ + + G + PTP+Q IP IL+GKDV+ +A+TGSGKTAAF +P+ +
Sbjct: 80 FQSMGLSYPVYKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLVPLFEK 139
Query: 122 LA--EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRP 179
L + G AL++TPTRELA Q + K LG LR +++GG + Q +L P
Sbjct: 140 LKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFAALHENP 199
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
++I TPGR+ +++E + +++V DEADR+ ++GF E+L+ + + LP RQT
Sbjct: 200 DIIIGTPGRLMHVIQE---MNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPDARQT 256
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
LLFSAT+ + + K E LK + + + K L+H+L +
Sbjct: 257 LLFSATLPKLIVEFARAGLTEPVLIRLDVDTKLSEQLKLSFFSLRLDDKPALLLHLLRNV 316
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
++FV+T + ++S Q+ R ++ RF + +LL
Sbjct: 317 VKPQ-EQTVVFVATKHHVEYLKELLSAEGVDCSCIYSALDQTARKISIGRFVHRKVMLLL 375
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
TDVA+RG+DIP +D V+NY+ P P+ + S V ++V ++++
Sbjct: 376 VTDVAARGIDIPLLDNVINYNFPCKPKLFLHRVGRVARAGRGGTAYSLVCPDEVPYLYDL 435
Query: 420 EAVVGKQLE 428
+G+ ++
Sbjct: 436 HLFLGRPMQ 444
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 121/376 (32%), Positives = 183/376 (48%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LG++E T +E G+ TP+Q IP IL GKD++G A+TG+GKT AF LPIL +
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKA-LGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
+ + V AL++ PTRELA Q+ + K L + + GG D+ Q + L H
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTH 126
Query: 181 VVIATPGRI-KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
+V+ATPGR+ + E D+ S +VLDEAD++L GF ++ + P ++QT
Sbjct: 127 IVVATPGRLLDHIRRETIDL----SNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQT 182
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
+LFSAT+ D++ L + ++ + TV+T++Q+ I K L V+ +
Sbjct: 183 MLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMDRD 242
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
+ A+IF T LH Q++R + F+ + L+
Sbjct: 243 QPF---LAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLI 299
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLD+ V V NYDIP Y +FV D + EI
Sbjct: 300 ATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEI 359
Query: 420 EAVVGKQLEEFECKEQ 435
E +G ++ E EQ
Sbjct: 360 EKTLGAPIQR-EIIEQ 374
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 121/376 (32%), Positives = 183/376 (48%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F LG++E T +E G+ TP+Q IP IL GKD++G A+TG+GKT AF LPIL +
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKA-LGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
+ + V AL++ PTRELA Q+ + K L + + GG D+ Q + L H
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTH 126
Query: 181 VVIATPGRI-KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
+V+ATPGR+ + E D+ S +VLDEAD++L GF ++ + P ++QT
Sbjct: 127 IVVATPGRLLDHIRRETIDL----SNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQT 182
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
+LFSAT+ D++ L + ++ + TV+T++Q+ I K L V+ +
Sbjct: 183 MLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMDRD 242
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
+ A+IF T LH Q++R + F+ + L+
Sbjct: 243 QPF---LAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLI 299
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
ATDVA+RGLD+ V V NYDIP Y +FV D + EI
Sbjct: 300 ATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEI 359
Query: 420 EAVVGKQLEEFECKEQ 435
E +G ++ E EQ
Sbjct: 360 EKTLGAPIQR-EIIEQ 374
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 359 (131.4 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 93/294 (31%), Positives = 154/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 266 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 325
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 326 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 382
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 383 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSL- 441
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 442 -ILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 500
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 501 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 554
Score = 141 (54.7 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 200 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPG 246
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 359 (131.4 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 93/294 (31%), Positives = 154/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 267 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 326
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 327 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 383
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 384 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSL- 442
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 443 -ILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 501
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 502 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 555
Score = 141 (54.7 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 201 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPG 247
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/372 (30%), Positives = 188/372 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
+L SATM SD L+ + + E T+E ++Q YI + + + + + L
Sbjct: 210 VLLSATMPSDVLEVTKKFMRDPIRILVKKEEL-TLEGIRQFYINVER---EEWKLDTLCD 265
Query: 299 M-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ E + I A+IF++T R D A+H Q +R + F+SG + +
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D +
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 418 EIEAVVGKQLEE 429
+IE +EE
Sbjct: 386 DIETFYNTSIEE 397
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/372 (30%), Positives = 188/372 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
+L SATM SD L+ + + E T+E ++Q YI + + + + + L
Sbjct: 210 VLLSATMPSDVLEVTKKFMRDPIRILVKKEEL-TLEGIRQFYINVER---EEWKLDTLCD 265
Query: 299 M-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ E + I A+IF++T R D A+H Q +R + F+SG + +
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D +
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 418 EIEAVVGKQLEE 429
+IE +EE
Sbjct: 386 DIETFYNTSIEE 397
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/372 (30%), Positives = 188/372 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
+L SATM SD L+ + + E T+E ++Q YI + + + + + L
Sbjct: 210 VLLSATMPSDVLEVTKKFMRDPIRILVKKEEL-TLEGIRQFYINVER---EEWKLDTLCD 265
Query: 299 M-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ E + I A+IF++T R D A+H Q +R + F+SG + +
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D +
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 418 EIEAVVGKQLEE 429
+IE +EE
Sbjct: 386 DIETFYNTSIEE 397
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/372 (30%), Positives = 188/372 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
+L SATM SD L+ + + E T+E ++Q YI + + + + + L
Sbjct: 210 VLLSATMPSDVLEVTKKFMRDPIRILVKKEEL-TLEGIRQFYINVER---EEWKLDTLCD 265
Query: 299 M-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ E + I A+IF++T R D A+H Q +R + F+SG + +
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D +
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 418 EIEAVVGKQLEE 429
+IE +EE
Sbjct: 386 DIETFYNTSIEE 397
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/372 (30%), Positives = 188/372 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
+L SATM SD L+ + + E T+E ++Q YI + + + + + L
Sbjct: 210 VLLSATMPSDVLEVTKKFMRDPIRILVKKEEL-TLEGIRQFYINVER---EEWKLDTLCD 265
Query: 299 M-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ E + I A+IF++T R D A+H Q +R + F+SG + +
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D +
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 418 EIEAVVGKQLEE 429
+IE +EE
Sbjct: 386 DIETFYNTSIEE 397
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/372 (30%), Positives = 188/372 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
+L SATM SD L+ + + E T+E ++Q YI + + + + + L
Sbjct: 210 VLLSATMPSDVLEVTKKFMRDPIRILVKKEEL-TLEGIRQFYINVER---EEWKLDTLCD 265
Query: 299 M-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ E + I A+IF++T R D A+H Q +R + F+SG + +
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D +
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 418 EIEAVVGKQLEE 429
+IE +EE
Sbjct: 386 DIETFYNTSIEE 397
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/372 (30%), Positives = 188/372 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F + L+E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL-MNRP 179
++ D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L M P
Sbjct: 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAP 152
Query: 180 HVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
H+++ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q
Sbjct: 153 HIIVGTPGRVFDMLNRRY-LSPKY--IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209
Query: 240 LLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
+L SATM SD L+ + + E T+E ++Q YI + + + + + L
Sbjct: 210 VLLSATMPSDVLEVTKKFMRDPIRILVKKEEL-TLEGIRQFYINVER---EEWKLDTLCD 265
Query: 299 M-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATI 357
+ E + I A+IF++T R D A+H Q +R + F+SG + +
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 358 LLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIH 417
L+ TD+ +RG+D+ V LV+NYD+P +Y + VT+ D +
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 418 EIEAVVGKQLEE 429
+IE +EE
Sbjct: 386 DIETFYNTSIEE 397
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 118/380 (31%), Positives = 189/380 (49%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S + T F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA
Sbjct: 30 SNWNEITDNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 89
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
FA+ IL +L + ALV+ PTRELA Q+ + ALG + C +GG ++ +
Sbjct: 90 TFAISILQQLEIEQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEM 149
Query: 173 KSLM-NRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQ 231
+ L PH+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ
Sbjct: 150 QKLQAEAPHIVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQ 206
Query: 232 CLPKNRQTLLFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDV 290
L N Q +L SATM +D L+ + E T+E +KQ YI + + +
Sbjct: 207 KLSTNIQVVLLSATMPADVLEVTTKFMREPVRILVKKEEL-TLEGIKQFYINVER---EE 262
Query: 291 YLMHVLSKM-EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHR 349
+ + L + E + I A+IF++T R D ALH Q +R +
Sbjct: 263 WKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMRE 322
Query: 350 FKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVT 409
F+SG + +L+ TD+ +RG+D+ V LV+NYD+P +Y +FVT
Sbjct: 323 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVT 382
Query: 410 QNDVDLIHEIEAVVGKQLEE 429
+ D ++ +IE +EE
Sbjct: 383 EEDKRILRDIETFYNTTVEE 402
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 125/401 (31%), Positives = 202/401 (50%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
++F+ L L+ + +LG +PT +Q IP +L GKD++ AQTG+GKTA+F LP+L
Sbjct: 1 MSFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLL 60
Query: 120 HRLAED--PYG-------VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLT 170
+L G + AL++ PTRELA Q+ L + + GG+D
Sbjct: 61 EQLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQE 120
Query: 171 QAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVF 230
Q + L+ +++ATPGR LL+ F LVLDEADR+LD+GF +++ +
Sbjct: 121 QKQRLIWGVDILVATPGR---LLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKII 177
Query: 231 QCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDV 290
+ LP++RQ LLFSATM+ +++ L + + +K + ++Q + + K K
Sbjct: 178 ERLPEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKSA 237
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L H+++ + A+IF+ T A ++HS ++Q R L+ F
Sbjct: 238 LLSHIITTQN---WQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDF 294
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
KSG+ L+AT +A+RGLDI + V+NYD+P DY S V++
Sbjct: 295 KSGKIKFLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSK 354
Query: 411 NDVDLIHEIEAVVG-----KQLEEFECKEQEVLSDITRVYK 446
++ + IE+ +G K+ EEF K+ LS + V K
Sbjct: 355 DNFRELCAIESRLGHIIERKEFEEFPVKKTVPLSKLNYVTK 395
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 364 (133.2 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 100/317 (31%), Positives = 160/317 (50%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ ++ + H+R VV GG D+ Q + L H+++ATPGR+
Sbjct: 300 ISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 359
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I +LVLDEADR+LD+GFE ++R +V Q PK RQT++FSAT
Sbjct: 360 LDMMERGK-IG--LDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSAT 416
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L F T E + Q+ +++ +N K +L+ +L+ +
Sbjct: 417 FPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSL- 475
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG+ IL+AT VA+
Sbjct: 476 -TLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAA 534
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSF-------VTQNDVDLIHE 418
RGLDI V V+N+D+P +Y SF +T++ +D++ E
Sbjct: 535 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVE 594
Query: 419 IEAVVGKQLEEFECKEQ 435
+ V LE + Q
Sbjct: 595 AKQEVPSWLESLAYEHQ 611
Score = 135 (52.6 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I +D++ AQTGSGKTAAF LP+L ++ D G
Sbjct: 230 RPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPG 276
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 357 (130.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 93/294 (31%), Positives = 153/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D + Q + L H+++ATPGR+
Sbjct: 267 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRL 326
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 327 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 383
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 384 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSL- 442
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG+ IL+AT VA+
Sbjct: 443 -TLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAA 501
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 502 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDL 555
Score = 141 (54.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 201 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPG 247
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 479 (173.7 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 111/357 (31%), Positives = 184/357 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
T+A G+++ ++ + LG +PTP+Q IP I+ G+D++G+A+TGSGKT AF LP+
Sbjct: 511 TWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFR 570
Query: 121 RLAEDPY-----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+ + P G +A+++ PTREL Q+ + + L LR V GG + Q L
Sbjct: 571 HILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAEL 630
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLP 234
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R++ P
Sbjct: 631 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRP 690
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYL 292
+RQT++FSAT ++ L K E G ++V + ++Q + + + K L
Sbjct: 691 -DRQTVMFSATFPRQMEALARRILKKPI--EVIVGGRSVVCKEVEQHVVILNDDAKFFKL 747
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+ +L ++ G S I+FV + ++LH Q R S + FKS
Sbjct: 748 LELLGIYQEAG--SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKS 805
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVT 409
G+ +L+AT VA+RGLD+ + LV+NYD+P + DY +F+T
Sbjct: 806 GKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFIT 862
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 357 (130.7 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 91/263 (34%), Positives = 146/263 (55%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 269 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 328
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 329 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 385
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ ++ K +L+ +L+ +
Sbjct: 386 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSL- 444
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 445 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 503
Query: 366 RGLDIPTVDLVLNYDIPRYPRDY 388
RGLDI V V+N+D+P +Y
Sbjct: 504 RGLDISNVKHVINFDLPSDIEEY 526
Score = 141 (54.7 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 203 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPG 249
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 463 (168.0 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 121/338 (35%), Positives = 181/338 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-- 119
F+ L++ ++ +E R T +Q I L+GKDVLG A+TGSGKT AF +P+L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 120 -HRL---AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+RL + D GVL +I+PTRELAYQ E + +G +++GG DL +A+ +
Sbjct: 131 LYRLQWTSTDGLGVL--IISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
N ++++ TPGR+ L D I + + LVLDEADR+LD+GF + + + + LPK
Sbjct: 189 -NNINILVCTPGRL--LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPK 245
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK--TVETLKQQYIFIPKNVKDVYLM 293
RQTLLFSAT T ++ L LS + +E K T TL+Q YI K L
Sbjct: 246 KRQTLLFSATQTKSVKDLARLSLKNPEYIWVHEKAKYSTPATLEQNYIVCELQQKISVLY 305
Query: 294 HVL-SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRF 350
L S ++ + +I+F S+C+ +ALH + Q +R+ + F
Sbjct: 306 SFLRSHLK----KKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEF 361
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
++ +L ATD+A+RGLD P V+ VL +D P Y
Sbjct: 362 VRKRSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTY 399
Score = 37 (18.1 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 425 KQLEEFECKEQEVLSDITRVYKARRV 450
K L++ E + V +T+V +A++V
Sbjct: 650 KALQKKEPSKSSVKKKVTKVAEAKKV 675
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 472 (171.2 bits), Expect = 2.6e-44, P = 2.6e-44
Identities = 119/331 (35%), Positives = 177/331 (53%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF G + + K+ +PT +Q +P +L G+DV+G+A+TGSGKTAAF LP++
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 121 RLAEDPY-----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+ + P G + ++ PTRELA+Q+ + K LR V GGM Q K L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCLP 234
+V+ATPGR+ +L+ R +LVLDEADR+ D+GFE ++R +V Q P
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKA---LTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRP 405
Query: 235 KNRQTLLFSATMTSDLQTLL-ELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDV-YL 292
+RQTLLFSATM ++ L E+ ++ G E + Q IP + + + +L
Sbjct: 406 -DRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMAN-EDITQVVNVIPSDAEKLPWL 463
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+ L M D G ++F S + + ALH K Q+ R+ L +FKS
Sbjct: 464 LEKLPGMIDEG--DVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKS 521
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPR 383
G +L+ATDVA+RGLDI ++ V+NYDI +
Sbjct: 522 GVHHVLIATDVAARGLDIKSLKTVVNYDIAK 552
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 473 (171.6 bits), Expect = 3.0e-44, P = 3.0e-44
Identities = 122/373 (32%), Positives = 188/373 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F +GL+ + + G + PTP+Q IP IL G+DV+ +A+TGSGKTA F LP+ R
Sbjct: 38 FQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILRGRDVVAMARTGSGKTACFLLPMFER 97
Query: 122 L-AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
L A P G AL+++PTRELA Q + K LG L+ +V+GG + Q +L P
Sbjct: 98 LKAPSPSGARALILSPTRELALQTLKFTKELGKFTGLKTALVLGGDKMEDQFAALHENPD 157
Query: 181 VVIATPGR-IKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
++IATPGR + V +E + + V +++V DEADR+ ++GF E+L+ + LP + QT
Sbjct: 158 IIIATPGRLVHVAVEMNLKLQSV----EYVVFDEADRLFEMGFAEQLQEILARLPGSHQT 213
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLS-- 297
+LFSAT+ L + K E LK + + + K L+H+L
Sbjct: 214 VLFSATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRCV 273
Query: 298 -KMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKS--QSQRLSALHRFKSGQ 354
K +D ++FV+T H Q H + S Q+ R + +F G+
Sbjct: 274 VKPQDQ----TVVFVATKH--HTEYLKELLTSQGICCTHIYSSLDQTARKINIAKFAHGK 327
Query: 355 ATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVD 414
+LL TDVA+RGLDIP +D V+NY P + + S V +++
Sbjct: 328 CQVLLVTDVAARGLDIPMLDNVINYSFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDEMP 387
Query: 415 LIHEIEAVVGKQL 427
I ++ +G+ L
Sbjct: 388 YIFDLHLFLGRPL 400
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 355 (130.0 bits), Expect = 3.5e-44, Sum P(2) = 3.5e-44
Identities = 92/294 (31%), Positives = 154/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG ++ Q + L H+++ATPGR+
Sbjct: 268 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRL 327
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 328 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 385 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSL- 443
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 444 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 502
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556
Score = 141 (54.7 bits), Expect = 3.5e-44, Sum P(2) = 3.5e-44
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 202 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPG 248
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 355 (130.0 bits), Expect = 3.5e-44, Sum P(2) = 3.5e-44
Identities = 92/294 (31%), Positives = 154/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG ++ Q + L H+++ATPGR+
Sbjct: 268 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRL 327
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 328 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 385 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSL- 443
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 444 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 502
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556
Score = 141 (54.7 bits), Expect = 3.5e-44, Sum P(2) = 3.5e-44
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL ++ D G
Sbjct: 202 RPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPG 248
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 464 (168.4 bits), Expect = 4.1e-44, Sum P(2) = 4.1e-44
Identities = 122/372 (32%), Positives = 187/372 (50%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP-- 117
+TF GL ++ G PTP+Q P L+ +D++ +A+TGSGKT + +P
Sbjct: 435 ITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF 494
Query: 118 IL--HRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
IL H + G L++ PTRELA Q+ ++ G + C + GG Q K L
Sbjct: 495 ILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKEL 554
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
+V+ATPGR+ +LE I F + LVLDEADR+LD+GFE ++R + +P
Sbjct: 555 ERGADIVVATPGRLNDILEMKM-ID--FQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPP 611
Query: 236 NRQTLLFSATMTSDLQTLL-ELSANKAYFYEAYEGFKTVETLKQQYI-FIPKNVKDVYLM 293
RQTL+++AT +++ + +L N QY+ +P+ K+ L
Sbjct: 612 RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLE 671
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSC-HXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+L + ++ G + IIF ST R C H AV +H K+Q +R L++F+S
Sbjct: 672 QIL-RSQERGSK-VIIFCSTKRLCDHLARSVGRHFG--AVVIHGDKTQGERDWVLNQFRS 727
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G++ +L+ATDVA+RGLDI + +V+NYD P DY +F T+ D
Sbjct: 728 GKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQD 787
Query: 413 ----VDLIHEIE 420
DLI +E
Sbjct: 788 WKYAPDLIKVLE 799
Score = 39 (18.8 bits), Expect = 4.1e-44, Sum P(2) = 4.1e-44
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 41 TQLEKFTNPDPNSTTT 56
TQ E+ + P P+S TT
Sbjct: 47 TQYERPSAPPPHSATT 62
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 352 (129.0 bits), Expect = 4.6e-44, Sum P(2) = 4.6e-44
Identities = 92/295 (31%), Positives = 153/295 (51%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSLMNRPHVVIATPGR 188
++LV+ PTRELA Q+ E+ + L C VV GG D+ Q + L H+++ATPGR
Sbjct: 268 ISLVLAPTRELAVQIYEEARKFSYRSRVLPC-VVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 189 IKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQ---CLPKN-RQTLLFSA 244
+ ++E I F K+LVLDEADR+LD+GFE ++R + + PK R T++FSA
Sbjct: 327 LVDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSA 383
Query: 245 TMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGI 304
T ++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 384 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGTDSL 443
Query: 305 RSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVA 364
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA
Sbjct: 444 --TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVA 501
Query: 365 SRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
+RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 502 ARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKDL 556
Score = 143 (55.4 bits), Expect = 4.6e-44, Sum P(2) = 4.6e-44
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F+ + + E + + RPTPVQ H IP I E +D++ AQTGSGKTAAF LPIL
Sbjct: 181 SFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS 240
Query: 121 RLAEDPYG 128
++ D G
Sbjct: 241 QIYTDGPG 248
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 465 (168.7 bits), Expect = 4.8e-44, P = 4.8e-44
Identities = 128/388 (32%), Positives = 197/388 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
+F L E V+ + +PTPVQ + +P + G+D++ AQTGSGKT F P+L
Sbjct: 187 SFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS 246
Query: 121 RL-----AEDPY--GVLA--------LVITPTRELAYQLAEQFKALGSGLHLRCEVVVGG 165
A P G + LV+ PTREL Q+ E+ K +R VV GG
Sbjct: 247 ESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSYRSWVRACVVYGG 306
Query: 166 MDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE 225
D+ Q +++ +++ATPGR+K LL+ + ++LVLDEADR+LD+GFE +
Sbjct: 307 ADIGQQMRNMDRGCDLLVATPGRLKDLLDRGK---VSLANIRYLVLDEADRMLDMGFEPQ 363
Query: 226 LR-VVFQC-LP--KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYI 281
+R +V +C +P K+RQTL+FSAT D+Q L F T E + Q+ +
Sbjct: 364 IRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKIL 423
Query: 282 FIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQS 341
++ + K ++ +LS E+ G+ I+F T R A A+H +SQ
Sbjct: 424 YVEDDEKKSVILDLLSANEN-GL--TIVFTETKRMADNLADYLYDQGFPATAIHGDRSQY 480
Query: 342 QRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXX 401
+R AL FK+G A IL+AT VA+RGLDIP V V+NYD+P DY
Sbjct: 481 EREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNV 540
Query: 402 XXXXSFVTQNDVDLIHEIEAVVGKQLEE 429
+F +N+ +++ + ++ + +E
Sbjct: 541 GIATAFFNRNNKNVVKGLIELLSEANQE 568
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 118/362 (32%), Positives = 181/362 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP-IL 119
TF G ++ +Q K+ G +PTP+Q P L G+D++G+A TGSGKT ++ LP I+
Sbjct: 128 TFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIV 187
Query: 120 HRLAEDP--YG--VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
H A+ YG + LV+ PTRELA Q+ + G +R V GG Q + L
Sbjct: 188 HINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDL 247
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
+ IATPGR+ +LE R +LVLDEADR+LD+GFE ++R + +
Sbjct: 248 ARGVEICIATPGRLIDMLEAGKTN---LKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP 304
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYE-GFKTVETLKQQYIFIPK-NVKDVYLM 293
+RQTL++SAT ++Q L N T+ Q I + + +D +
Sbjct: 305 DRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVK 364
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSG 353
H+ S + + ++F ST R+C A+A+H K Q++R L F+ G
Sbjct: 365 HLESALNEKD-NKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKG 423
Query: 354 QATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDV 413
+ +I++ATDVA+RG+D+ + V+NYD+P DY SF T+ +
Sbjct: 424 KTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNS 483
Query: 414 DL 415
L
Sbjct: 484 KL 485
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 132/386 (34%), Positives = 191/386 (49%)
Query: 51 PNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGK 110
P + S TFA L + ++ ++G PT +Q IP ++ G DV+GLAQTG+GK
Sbjct: 4 PEYSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGK 63
Query: 111 TAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGL-HLRCEVVVGGMDLL 169
TAAFA+P+L ++ ALV+ PTRELA Q+AE F G+ L L + GG
Sbjct: 64 TAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYA 123
Query: 170 TQAKSLMNRPHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRV 228
Q L VV+ TPGR+ LE D+ SR FLVLDEAD +L +GF +++
Sbjct: 124 VQLAGLRRGAQVVVGTPGRMIDHLERATLDL----SRVDFLVLDEADEMLTMGFADDVER 179
Query: 229 VFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYE---GFKTV--ETLKQQYIFI 283
+ P+ +Q LFSATM ++ +LSA Y ++ +E KT E + Q YI +
Sbjct: 180 ILSETPEYKQVALFSATMPPAIR---KLSAK--YLHDPFEVTCKAKTAVAENISQSYIQV 234
Query: 284 PKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQR 343
+ + D L VL ++E + I+FV T ++ A A+ Q+QR
Sbjct: 235 ARKM-DA-LTRVL-EVEPF--EAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQR 289
Query: 344 LSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXX 403
+ + G IL+ATDVA+RGLD+ + VLNYDIP Y
Sbjct: 290 ERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGA 349
Query: 404 XXSFVTQNDVDLIHEIEAVVGKQLEE 429
FV+ ++ L+ IE + L E
Sbjct: 350 ALIFVSPRELHLLKAIEKATRQTLTE 375
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 372 (136.0 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 96/295 (32%), Positives = 149/295 (50%)
Query: 15 AKPKSKTRSKXXXXXXXXXXSKNAKTTQLEKFTN-P-DPNSTTTDSTVT--------FAG 64
AK +K ++ +K + EKF + P D N+ + T + F
Sbjct: 175 AKKSNKNKNADADNKKSKKSNKKEEIESSEKFESFPMDENNEQEEETTSKKKKKTGGFQS 234
Query: 65 LGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAE 124
+ L + ++ + G PTP+Q IP IL+G D++G+A+TGSGKT AF +P++ +L +
Sbjct: 235 MDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGD 294
Query: 125 DP--YGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVV 182
GV A++++PTRELA Q + K G LR ++VGG + Q L P ++
Sbjct: 295 HSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDII 354
Query: 183 IATPGRIKV-LLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 241
IATPGR+ LLE + S+ +++V DEADR+ ++GF E+L + L +NRQTLL
Sbjct: 355 IATPGRLMHHLLETGMSL----SKVQYIVFDEADRLFEMGFNEQLTEILSKLSENRQTLL 410
Query: 242 FSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
FSAT+ S L + N K E L + + K L+ +L
Sbjct: 411 FSATLPSLLVDFVRAGLNNPKLINLDTDTKISENLSLSFFTLRHEEKLGVLLFLL 465
Score = 132 (51.5 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 33/133 (24%), Positives = 62/133 (46%)
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
S IIFVST + +H + R L +F+S Q +++ TD+A+
Sbjct: 499 STIIFVSTKYHVEFIHILLERAGIASTYIHGYLDPVARKINLAKFRSHQVGVMVVTDLAA 558
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGK 425
RG+DIP +D V+N+D P + + S V+ ++V + ++ +G+
Sbjct: 559 RGIDIPLLDNVINFDFPPKEKIFIHRVGRVARAGRSGIAYSLVSPDEVPYMIDLHLYLGR 618
Query: 426 Q-LEEFECKEQEV 437
+ L +F+ + Q +
Sbjct: 619 KFLNKFQYEGQTI 631
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 356 (130.4 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 93/294 (31%), Positives = 152/294 (51%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 263 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 322
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 323 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 379
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ K +L+ +L +
Sbjct: 380 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSL- 438
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 439 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 497
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 498 RGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDL 551
Score = 138 (53.6 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGK-DVLGLAQTGSGKTAAFALPILH 120
F+ + + E + + RPTPVQ H IP I++GK D++ AQTGSGKTAAF LPIL
Sbjct: 177 FSDIDMGEIIMGNIELTRYTRPTPVQKHAIP-IIKGKRDLMACAQTGSGKTAAFLLPILS 235
Query: 121 RLAEDPYG 128
++ D G
Sbjct: 236 QIYTDGPG 243
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 356 (130.4 bits), Expect = 5.5e-44, Sum P(2) = 5.5e-44
Identities = 93/294 (31%), Positives = 152/294 (51%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 266 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 325
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 326 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 382
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ K +L+ +L +
Sbjct: 383 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSL- 441
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG++ IL+AT VA+
Sbjct: 442 -TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 500
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 501 RGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDL 554
Score = 138 (53.6 bits), Expect = 5.5e-44, Sum P(2) = 5.5e-44
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGK-DVLGLAQTGSGKTAAFALPILH 120
F+ + + E + + RPTPVQ H IP I++GK D++ AQTGSGKTAAF LPIL
Sbjct: 180 FSDIDMGEIIMGNIELTRYTRPTPVQKHAIP-IIKGKRDLMACAQTGSGKTAAFLLPILS 238
Query: 121 RLAEDPYG 128
++ D G
Sbjct: 239 QIYTDGPG 246
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 125/385 (32%), Positives = 200/385 (51%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP-I 118
V+ +G ++ +++ K + PTP+Q P L GKD++G A+TGSGKT AF LP
Sbjct: 113 VSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172
Query: 119 LHRLAED--PYG--VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 174
+H LA+ YG + LV+ PTRELA Q+ ++ + +R GG+ Q +
Sbjct: 173 VHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYA 232
Query: 175 LMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 234
L H++IA PGR+ LLE++ + + R +LVLDEAD++LD+GFE ++R + +
Sbjct: 233 LKQGVHILIACPGRLIDLLEQN--VTNLM-RVTYLVLDEADKMLDMGFELQIRKIVDQIR 289
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV---ETLKQQYIFIPKNVKDVY 291
+RQTL++SAT ++Q L + K + G T+ ++KQ+ + ++ K
Sbjct: 290 PDRQTLMWSATWPKEVQALAK-DLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGN 348
Query: 292 LMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L +L ++ R I+FV T ++ A+ +H K Q +R L+ FK
Sbjct: 349 LKSLLQRIFKDNDR-IIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFK 407
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
+G++ I++ATDVASRGLDI V V+N+D P DY +F+T +
Sbjct: 408 TGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTAD 467
Query: 412 D-------VDLIHEIEAVVGKQLEE 429
V ++ E E V QLE+
Sbjct: 468 KYRLAKDLVKILRESEQPVPPQLEK 492
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 115/370 (31%), Positives = 186/370 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L D ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 95 LEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 154
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L N Q +
Sbjct: 155 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVV 211
Query: 241 LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM- 299
L SATM D+ + + + + T+E +KQ YI + + + + + L +
Sbjct: 212 LLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVER---EEWKLDTLCDLY 268
Query: 300 EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILL 359
E + I A+IF++T R D ALH Q +R + F+SG + +L+
Sbjct: 269 ETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLI 328
Query: 360 ATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +I
Sbjct: 329 TTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI 388
Query: 420 EAVVGKQLEE 429
E +EE
Sbjct: 389 ETFYNTTVEE 398
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 125/385 (32%), Positives = 200/385 (51%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP-I 118
V+ +G ++ +++ K + PTP+Q P L GKD++G A+TGSGKT AF LP
Sbjct: 113 VSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172
Query: 119 LHRLAED--PYG--VLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 174
+H LA+ YG + LV+ PTRELA Q+ ++ + +R GG+ Q +
Sbjct: 173 VHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYA 232
Query: 175 LMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 234
L H++IA PGR+ LLE++ + + R +LVLDEAD++LD+GFE ++R + +
Sbjct: 233 LKQGVHILIACPGRLIDLLEQN--VTNLM-RVTYLVLDEADKMLDMGFELQIRKIVDQIR 289
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV---ETLKQQYIFIPKNVKDVY 291
+RQTL++SAT ++Q L + K + G T+ ++KQ+ + ++ K
Sbjct: 290 PDRQTLMWSATWPKEVQALAK-DLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGN 348
Query: 292 LMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L +L ++ R I+FV T ++ A+ +H K Q +R L+ FK
Sbjct: 349 LKSLLQRIFKDNDR-IIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFK 407
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
+G++ I++ATDVASRGLDI V V+N+D P DY +F+T +
Sbjct: 408 TGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTAD 467
Query: 412 D-------VDLIHEIEAVVGKQLEE 429
V ++ E E V QLE+
Sbjct: 468 KYRLAKDLVKILRESEQPVPPQLEK 492
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 119/338 (35%), Positives = 183/338 (54%)
Query: 61 TFAGL-GLAEW-AVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALP- 117
TFA L G ++ + LG T +Q I +LEGKDVL A+TGSGKT AF LP
Sbjct: 67 TFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPA 126
Query: 118 --ILHRLAEDPY-GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 174
+LH+L + G ++++PTREL+ Q L G +L +V+GG + +
Sbjct: 127 IELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDK 186
Query: 175 LMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 234
L +++ATPGR+ L+ + + K L++DEADR+LD+GFE E++ V + LP
Sbjct: 187 LAKGVSILVATPGRLLDHLQNTDNF--LVRNMKCLIIDEADRILDIGFEIEMQQVLRHLP 244
Query: 235 KNRQTLLFSATMTSDLQTLLELSAN----KAYFYEAYEGFKTVETLKQQYIFIPKNVKDV 290
K RQ++LFSAT + + L++L+ + + +E E TVE L+Q YI P + + +
Sbjct: 245 KQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEE-ATVEGLQQGYIVAPSDKRLL 303
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L L K + + ++F S+C S D +++H + Q +R + +F
Sbjct: 304 LLFTFLKKNKT---KKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQF 360
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+ ILL TDVA+RGLDIP VD ++ YD PR+Y
Sbjct: 361 CQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREY 398
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 472 (171.2 bits), Expect = 8.3e-44, P = 8.3e-44
Identities = 120/372 (32%), Positives = 191/372 (51%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL- 119
T+ G++ + K+ G +PTP+Q+ IP I+ G+D++G+A+TGSGKT AF LP+
Sbjct: 372 TWVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFR 431
Query: 120 H----RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
H R E+ G +A+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 432 HIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL 491
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLP 234
+++ TPGR+ +L + R ++VLDEADR+ D+GFE + +R+V P
Sbjct: 492 KRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP 551
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYL 292
+RQT++FSAT ++ L +K E G ++V ++Q I I + K + L
Sbjct: 552 -DRQTVMFSATFPRAMEALARRILSKPI--EVQVGGRSVVCSDVEQHVIVIEEENKFLKL 608
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+ +L ++ G S IIFV ++LH Q R S ++ FK+
Sbjct: 609 LELLGHYQEKG--SVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKN 666
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G +L+AT VA+RGLD+ + LV+NY P + DY +F+T++
Sbjct: 667 GTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQ 726
Query: 413 V----DLIHEIE 420
D+I +E
Sbjct: 727 ARYAGDIIKALE 738
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 472 (171.2 bits), Expect = 8.4e-44, P = 8.4e-44
Identities = 124/393 (31%), Positives = 198/393 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL- 119
T+ G++ + K+ +PTP+Q IP I+ G+D++G+A+TGSGKT AF LP+
Sbjct: 358 TWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFR 417
Query: 120 HRLAEDPYGV----LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
H L + P G LA+++TPTRELA Q+ ++ K L LR V GG + Q L
Sbjct: 418 HILDQRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAEL 477
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE-LRVVFQCLP 234
+++ TPGR+ +L + R ++V+DEADR+ D+GFE + +R+V P
Sbjct: 478 KRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVRP 537
Query: 235 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYL 292
+RQT++FSAT ++ L +K E G ++V ++Q I I + K + L
Sbjct: 538 -DRQTVMFSATFPRTMEALARRILSKPV--EVQVGGRSVVCSDVEQHVIVIEEEKKFLKL 594
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+ +L ++ G S IIFV ++LH Q R S ++ FK+
Sbjct: 595 LEILGHYQEKG--SVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKN 652
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G +L+AT VA+RGLD+ + LV+NY P + DY +F+T+
Sbjct: 653 GACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQ 712
Query: 413 V----DLIHEIE---AVVGKQLEEF--ECKEQE 436
D++ +E + V +LE+ KEQ+
Sbjct: 713 ARYSGDILKALELSGSSVPAELEQLWTNFKEQQ 745
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 468 (169.8 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 113/380 (29%), Positives = 194/380 (51%)
Query: 65 LGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAE 124
+GL + ++ G +PTP+Q IP I++GKDV+ +++TGSGKTAAF +P+L +L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 125 -DPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVI 183
D G+ AL+++PTRELA Q + K LG LRC +VGG + Q ++ P +++
Sbjct: 89 RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILL 148
Query: 184 ATPGRI-KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLF 242
ATPGR+ V++E D + S +++V DEADR+ ++GF+++L + +P++RQTLLF
Sbjct: 149 ATPGRLLHVIVEMDLRL----SYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 243 SATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDM 302
SAT+ L + K + L + + K L+H+ +M D
Sbjct: 205 SATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRM-DR 263
Query: 303 GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATD 362
+ ++F +T + + ++S + R + +F Q IL+ TD
Sbjct: 264 ENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTD 323
Query: 363 VASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAV 422
VA+RG+DIP +D V+N P + + S + +++ + ++
Sbjct: 324 VAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMF 383
Query: 423 VGKQL----EEFECKEQEVL 438
+GK + ++ E KE E L
Sbjct: 384 LGKPINFASDKSEYKEDETL 403
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 468 (169.8 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 120/337 (35%), Positives = 181/337 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-- 119
F+ L++ ++ +E R T +Q I L+GKDVLG A+TGSGKT AF +P+L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 120 -HRL---AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+RL + D GVL +I+PTRELAYQ E + +G +++GG DL +A+ +
Sbjct: 131 LYRLQWTSTDGLGVL--IISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
N ++++ TPGR+ L D I + + LVLDEADR+LD+GF + + + + LPK
Sbjct: 189 -NNINILVCTPGRL--LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPK 245
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK--TVETLKQQYIFIPKNVKDVYLM 293
RQTLLFSAT T ++ L LS + +E K T TL+Q YI + K +
Sbjct: 246 KRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK---IS 302
Query: 294 HVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRFK 351
+ S + + +I+F S+C+ +ALH + Q +R+ + F
Sbjct: 303 VLFSFLRSHLTKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFV 362
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+A +L ATD+A+RGLD P V+ VL +D P Y
Sbjct: 363 RKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTY 399
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 468 (169.8 bits), Expect = 1.4e-43, P = 1.4e-43
Identities = 122/338 (36%), Positives = 182/338 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-- 119
F+ L++ ++ +E R T +Q I L+GKDVLG A+TGSGKT AF +P+L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 120 -HRL---AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+RL + D GVL +I+PTRELAYQ E + +G +++GG DL +A+ +
Sbjct: 131 LYRLQWTSTDGLGVL--IISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
N ++++ TPGR+ L D I + + LVLDEADR+LD+GF + + + + LPK
Sbjct: 189 -NNINILVCTPGRL--LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPK 245
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK--TVETLKQQYIFIPKNVKDVYLM 293
RQTLLFSAT T ++ L LS + +E K T TL+Q YI + K L
Sbjct: 246 KRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQKISVLF 305
Query: 294 HVL-SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRF 350
L S ++ + +I+F S+C+ +ALH + Q +R+ + F
Sbjct: 306 SFLRSHLK----KKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEF 361
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+A +L ATD+A+RGLD P V+ VL +D P Y
Sbjct: 362 VRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTY 399
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 356 (130.4 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 93/294 (31%), Positives = 153/294 (52%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ E+ + +R VV GG D + Q + L H+++ATPGR+
Sbjct: 261 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRL 320
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PKN-RQTLLFSAT 245
++E I F K+LVLDEADR+LD+GFE ++R +V Q PK R T++FSAT
Sbjct: 321 VDMMERGK-IGLDFC--KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 377
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L ++ F T E + Q+ +++ + K +L+ +L+ +
Sbjct: 378 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGRDSL- 436
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG+ IL+AT VA+
Sbjct: 437 -TLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAA 495
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEI 419
RGLDI V V+N+D+P +Y SF + ++++ ++
Sbjct: 496 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDL 549
Score = 133 (51.9 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG 128
RPTPVQ H IP I E +D++ AQTGSG TAAF LPIL ++ D G
Sbjct: 195 RPTPVQKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILSQIYTDGPG 241
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 466 (169.1 bits), Expect = 1.9e-43, P = 1.9e-43
Identities = 122/338 (36%), Positives = 181/338 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-- 119
F+ L++ ++ +E R T +Q I L+GKDVLG A+TGSGKT AF +P+L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 120 -HRL---AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+RL + D GVL +I+PTRELAYQ E + +G +++GG DL +A+ +
Sbjct: 131 LYRLQWTSTDGLGVL--IISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
N ++++ TPGR+ L D + + + LVLDEADR+LD+GF + + V + LPK
Sbjct: 189 -NNINILVCTPGRL--LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPK 245
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK--TVETLKQQYIFIPKNVKDVYLM 293
RQTLLFSAT T ++ L LS + +E K T TL+Q YI K L
Sbjct: 246 KRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLY 305
Query: 294 HVL-SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRF 350
L S ++ + +I+F S+C+ +ALH + Q +R+ + F
Sbjct: 306 SFLRSHLK----KKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEF 361
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+A +L ATD+A+RGLD P V+ VL +D P Y
Sbjct: 362 VRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTY 399
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 116/378 (30%), Positives = 185/378 (48%)
Query: 54 TTTDSTV-TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
T D+ V F L L V+ G P+ +Q I I EG+DVL AQ+G+GKTA
Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F + L R+ E+ AL++ PTRELA Q+ A+G L + +GG +
Sbjct: 76 TFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDI 135
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQC 232
++ + +V+ TPGR+ ++E + K +LDEAD +L GF+E++ +F+
Sbjct: 136 EAFRSGVQIVVGTPGRVLDMIERRYFKT---DKVKMFILDEADEMLSSGFKEQIYNIFRL 192
Query: 233 LPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYL 292
LP+ Q +L SATM D+ + N + T+E +KQ YI + ++D Y
Sbjct: 193 LPETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINV--ELED-YK 249
Query: 293 MHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L + D + + A+IF +T A+H+ Q++R + + F+
Sbjct: 250 FDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFR 309
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
SG + IL++TD+ +RG+D+ V LV+NYD+P +Y +FVT
Sbjct: 310 SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDR 369
Query: 412 DVDLIHEIEAVVGKQLEE 429
DV ++ EIE Q+EE
Sbjct: 370 DVGMMREIEKFYSTQIEE 387
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 116/378 (30%), Positives = 185/378 (48%)
Query: 54 TTTDSTV-TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
T D+ V F L L V+ G P+ +Q I I EG+DVL AQ+G+GKTA
Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F + L R+ E+ AL++ PTRELA Q+ A+G L + +GG +
Sbjct: 76 TFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDI 135
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQC 232
++ + +V+ TPGR+ ++E + K +LDEAD +L GF+E++ +F+
Sbjct: 136 EAFRSGVQIVVGTPGRVLDMIERRYFKT---DKVKMFILDEADEMLSSGFKEQIYNIFRL 192
Query: 233 LPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYL 292
LP+ Q +L SATM D+ + N + T+E +KQ YI + ++D Y
Sbjct: 193 LPETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINV--ELED-YK 249
Query: 293 MHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFK 351
L + D + + A+IF +T A+H+ Q++R + + F+
Sbjct: 250 FDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFR 309
Query: 352 SGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQN 411
SG + IL++TD+ +RG+D+ V LV+NYD+P +Y +FVT
Sbjct: 310 SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDR 369
Query: 412 DVDLIHEIEAVVGKQLEE 429
DV ++ EIE Q+EE
Sbjct: 370 DVGMMREIEKFYSTQIEE 387
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 362 (132.5 bits), Expect = 2.2e-43, Sum P(2) = 2.2e-43
Identities = 99/317 (31%), Positives = 162/317 (51%)
Query: 130 LALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRI 189
++LV+ PTRELA Q+ ++ + +R VV GG D+ Q + L H+++ATPGR+
Sbjct: 316 ISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRL 375
Query: 190 KVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQCL--PK-NRQTLLFSAT 245
++E I K+LVLDEADR+LD+GFE ++R +V Q PK +RQT++FSAT
Sbjct: 376 VDMMERGK-IG--LDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSAT 432
Query: 246 MTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIR 305
++Q L + F T E + Q+ +++ +N K +L+ +L+ +
Sbjct: 433 FPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSL- 491
Query: 306 SAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVAS 365
++FV T + ++H +SQ R ALH+F+SG+ I++AT VA+
Sbjct: 492 -TLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAA 550
Query: 366 RGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSF-------VTQNDVDLIHE 418
RGLDI V V+N+D+P +Y SF +T++ +D++ E
Sbjct: 551 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITKDLLDILVE 610
Query: 419 IEAVVGKQLEEFECKEQ 435
+ V LE + Q
Sbjct: 611 AKQEVPSWLENLAYEHQ 627
Score = 128 (50.1 bits), Expect = 2.2e-43, Sum P(2) = 2.2e-43
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRL-AEDPYGVLALVITPTRE 139
RPTPVQ + IP I +D++ AQTGSGKTAAF LP+L ++ +E P L T++
Sbjct: 245 RPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQ 303
>UNIPROTKB|Q13206 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
Length = 875
Score = 466 (169.1 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 122/338 (36%), Positives = 181/338 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-- 119
F+ L++ ++ +E R T +Q I L+GKDVLG A+TGSGKT AF +P+L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 120 -HRL---AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+RL + D GVL +I+PTRELAYQ E + +G +++GG DL +A+ +
Sbjct: 131 LYRLQWTSTDGLGVL--IISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
N ++++ TPGR+ L D + + + LVLDEADR+LD+GF + + V + LPK
Sbjct: 189 -NNINILVCTPGRL--LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPK 245
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK--TVETLKQQYIFIPKNVKDVYLM 293
RQTLLFSAT T ++ L LS + +E K T TL+Q YI K L
Sbjct: 246 KRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLY 305
Query: 294 HVL-SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRF 350
L S ++ + +I+F S+C+ +ALH + Q +R+ + F
Sbjct: 306 SFLRSHLK----KKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEF 361
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+A +L ATD+A+RGLD P V+ VL +D P Y
Sbjct: 362 VRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTY 399
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 466 (169.1 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 122/338 (36%), Positives = 181/338 (53%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-- 119
F+ L++ ++ +E R T +Q I L+GKDVLG A+TGSGKT AF +P+L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 120 -HRL---AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+RL + D GVL +I+PTRELAYQ E + +G +++GG DL +A+ +
Sbjct: 131 LYRLQWTSADGLGVL--IISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
N ++++ TPGR+ L D I + + LVLDEADR+LD+GF + + + + LPK
Sbjct: 189 -NNINILVCTPGRL--LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPK 245
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFK--TVETLKQQYIFIPKNVKDVYLM 293
RQTLLFSAT T ++ L LS + +E K T TL+Q YI K L
Sbjct: 246 KRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLY 305
Query: 294 HVL-SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRF 350
L S ++ + +I+F S+C+ +ALH + Q +R+ + F
Sbjct: 306 SFLRSHLK----KKSIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQMRRMEVYNEF 361
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
+A +L ATD+A+RGLD P V+ VL +D P Y
Sbjct: 362 VRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTY 399
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 111/379 (29%), Positives = 192/379 (50%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S D T TF +GL E ++ G +P+ +Q I +I++G+DV+ +Q+G+GKTA
Sbjct: 32 SEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 91
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F++ +L L AL++ PTRELA Q+ + ALG ++++C +GG ++
Sbjct: 92 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 151
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQ 231
+ L HVV TPGR+ ++ + +R K LVLDEAD +L+ GF+E++ V++
Sbjct: 152 RKLDYGQHVVAGTPGRVFDMIRRRS----LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 207
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP Q +L SAT+ ++ + T+E +KQ ++ + + + +
Sbjct: 208 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER---EEW 264
Query: 292 LMHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L + D + I A+IF +T R + ++H Q +R S + F
Sbjct: 265 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 324
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
+SG + +L++TDV +RGLD+P V L++NYD+P Y +FV
Sbjct: 325 RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN 384
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+D+ ++ +IE Q++E
Sbjct: 385 DDIRILRDIEQYYSTQIDE 403
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 111/379 (29%), Positives = 192/379 (50%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S D T TF +GL E ++ G +P+ +Q I +I++G+DV+ +Q+G+GKTA
Sbjct: 31 SEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F++ +L L AL++ PTRELA Q+ + ALG ++++C +GG ++
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQ 231
+ L HVV TPGR+ ++ + +R K LVLDEAD +L+ GF+E++ V++
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRS----LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP Q +L SAT+ ++ + T+E +KQ ++ + + + +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER---EEW 263
Query: 292 LMHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L + D + I A+IF +T R + ++H Q +R S + F
Sbjct: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 323
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
+SG + +L++TDV +RGLD+P V L++NYD+P Y +FV
Sbjct: 324 RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN 383
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+D+ ++ +IE Q++E
Sbjct: 384 DDIRILRDIEQYYSTQIDE 402
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 111/379 (29%), Positives = 192/379 (50%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S D T TF +GL E ++ G +P+ +Q I +I++G+DV+ +Q+G+GKTA
Sbjct: 31 SEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F++ +L L AL++ PTRELA Q+ + ALG ++++C +GG ++
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQ 231
+ L HVV TPGR+ ++ + +R K LVLDEAD +L+ GF+E++ V++
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRS----LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP Q +L SAT+ ++ + T+E +KQ ++ + + + +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER---EEW 263
Query: 292 LMHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L + D + I A+IF +T R + ++H Q +R S + F
Sbjct: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 323
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
+SG + +L++TDV +RGLD+P V L++NYD+P Y +FV
Sbjct: 324 RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN 383
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+D+ ++ +IE Q++E
Sbjct: 384 DDIRILRDIEQYYSTQIDE 402
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 111/379 (29%), Positives = 192/379 (50%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S D T TF +GL E ++ G +P+ +Q I +I++G+DV+ +Q+G+GKTA
Sbjct: 31 SEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F++ +L L AL++ PTRELA Q+ + ALG ++++C +GG ++
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQ 231
+ L HVV TPGR+ ++ + +R K LVLDEAD +L+ GF+E++ V++
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRS----LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP Q +L SAT+ ++ + T+E +KQ ++ + + + +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER---EEW 263
Query: 292 LMHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L + D + I A+IF +T R + ++H Q +R S + F
Sbjct: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 323
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
+SG + +L++TDV +RGLD+P V L++NYD+P Y +FV
Sbjct: 324 RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN 383
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+D+ ++ +IE Q++E
Sbjct: 384 DDIRILRDIEQYYSTQIDE 402
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 111/379 (29%), Positives = 192/379 (50%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S D T TF +GL E ++ G +P+ +Q I +I++G+DV+ +Q+G+GKTA
Sbjct: 31 SEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F++ +L L AL++ PTRELA Q+ + ALG ++++C +GG ++
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQ 231
+ L HVV TPGR+ ++ + +R K LVLDEAD +L+ GF+E++ V++
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRS----LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP Q +L SAT+ ++ + T+E +KQ ++ + + + +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER---EEW 263
Query: 292 LMHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L + D + I A+IF +T R + ++H Q +R S + F
Sbjct: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 323
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
+SG + +L++TDV +RGLD+P V L++NYD+P Y +FV
Sbjct: 324 RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN 383
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+D+ ++ +IE Q++E
Sbjct: 384 DDIRILRDIEQYYSTQIDE 402
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 111/379 (29%), Positives = 192/379 (50%)
Query: 53 STTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTA 112
S D T TF +GL E ++ G +P+ +Q I +I++G+DV+ +Q+G+GKTA
Sbjct: 31 SEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 113 AFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQA 172
F++ +L L AL++ PTRELA Q+ + ALG ++++C +GG ++
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 173 KSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQ 231
+ L HVV TPGR+ ++ + +R K LVLDEAD +L+ GF+E++ V++
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRS----LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 232 CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVY 291
LP Q +L SAT+ ++ + T+E +KQ ++ + + + +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER---EEW 263
Query: 292 LMHVLSKMED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L + D + I A+IF +T R + ++H Q +R S + F
Sbjct: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 323
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQ 410
+SG + +L++TDV +RGLD+P V L++NYD+P Y +FV
Sbjct: 324 RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN 383
Query: 411 NDVDLIHEIEAVVGKQLEE 429
+D+ ++ +IE Q++E
Sbjct: 384 DDIRILRDIEQYYSTQIDE 402
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 125/371 (33%), Positives = 188/371 (50%)
Query: 82 RPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH---RLAEDPY----GVL---- 130
+PTPVQ + +P + G+D++ AQTGSGKT F P+L + P G
Sbjct: 164 KPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRK 223
Query: 131 ----ALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATP 186
A+++ PTRELA Q+ ++ K ++ VV GG + Q + + +++ATP
Sbjct: 224 AYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATP 283
Query: 187 GRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR-VVFQC--LPKN-RQTLLF 242
GR+ LLE I + K+LVLDEADR+LD+GFE ++R +V C P RQTL+F
Sbjct: 284 GRLNDLLERGK-IS--LANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMF 340
Query: 243 SATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDM 302
SAT +D+Q L + F T E + Q+ +++ K L+ +LS D
Sbjct: 341 SATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTD- 399
Query: 303 GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATD 362
G+ +IFV T R + A A+H ++QS+R AL F+SG AT+L+AT
Sbjct: 400 GL--TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATA 457
Query: 363 VASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLI---HEI 419
VA+RGLDIP V V+NYD+P DY +F + +++ HEI
Sbjct: 458 VAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEI 517
Query: 420 EAVVGKQLEEF 430
+++ F
Sbjct: 518 LTEANQEVPSF 528
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 111/380 (29%), Positives = 190/380 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF +GL E ++ G +P+ +Q IP IL+ +DV+ AQ+G+GKTA F++ +L
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
L AL+++PTRELA Q+ + ALG ++++C +GG +L + L H
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
VV TPGR+ ++ + +R K LVLDEAD +L+ GF+E+L +++ LP Q
Sbjct: 147 VVSGTPGRVFDMIRRRN----LRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQV 202
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
+L SAT+ ++ + T+E +KQ ++ + + + + L +
Sbjct: 203 VLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDR---EEWKFDTLIDL 259
Query: 300 ED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
D + I A++F +T R + ++H Q R + F++G +L
Sbjct: 260 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 319
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
++TDV +RGLD+P V LV+NYD+P Y +FV Q+DV ++ +
Sbjct: 320 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRD 379
Query: 419 IEAVVGKQLEEFECKEQEVL 438
IE Q++E +++
Sbjct: 380 IEQYYSTQIDEMPMNIADII 399
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 464 (168.4 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 116/338 (34%), Positives = 178/338 (52%)
Query: 59 TVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPI 118
++ F G ++ + ++ G +PT +Q P + G+D++G+AQTGSGKT A+ LP
Sbjct: 156 SIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPA 215
Query: 119 LHRLAEDPY-----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAK 173
+ + P G +ALV+ PTRELA Q+ + GS H+R + GG QA+
Sbjct: 216 VVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQAR 275
Query: 174 SLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCL 233
L +VIATPGR+ LE R +LVLDEADR+LD+GFE ++R + Q +
Sbjct: 276 DLERGVEIVIATPGRLIDFLERGTTS---LKRCTYLVLDEADRMLDMGFEPQIRKIMQQI 332
Query: 234 PKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQ--QYIFI-PKNVKDV 290
+RQ L++SAT +++ L E N + + G ++ Q + + +N K +
Sbjct: 333 RPDRQVLMWSATWPKEVRQLAEEFLNN--YIQVNIGSLSLSANHNILQIVDVCDENEKLM 390
Query: 291 YLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRF 350
L+ +L+ + IIFV T + A A+H KSQ +R L F
Sbjct: 391 KLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSF 450
Query: 351 KSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
++G+ +IL+ATDVA+RGLD+ V V+NYD P DY
Sbjct: 451 RNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDY 488
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 111/385 (28%), Positives = 188/385 (48%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF G + ++ K+LG PTP+Q P + G+D++G++ TGSGKT ++ LP +
Sbjct: 123 TFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIV 182
Query: 121 RLAEDPY-----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSL 175
+ P G + LV+ PTRELA Q+ ++ G +R V GG+ Q + L
Sbjct: 183 HINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDL 242
Query: 176 MNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPK 235
+ + IATPGR+ +L+ + R +LVLDEADR+LD+GFE ++R + +
Sbjct: 243 IRGVEICIATPGRLLDMLDSNKTN---LRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP 299
Query: 236 NRQTLLFSATMTSDLQTLLELSANKAYFYEAYEG---FKTVETLKQQYIFIPKNVKDVYL 292
+RQT++FSAT ++Q L N + + G +KQ + K L
Sbjct: 300 DRQTVMFSATWPKEVQRLARDYLND--YIQVTVGSLDLAASHNIKQIVEVVDNADKRARL 357
Query: 293 MHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKS 352
+ ++ +IF T R A+A+H K+Q +R L+ F++
Sbjct: 358 GKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRT 417
Query: 353 GQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQND 412
G++ I++ATDVASRG+D+ + V NYD P DY ++ T ++
Sbjct: 418 GKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDN 477
Query: 413 VDLIHEIEAVVGKQLEEFECKEQEV 437
E+ +++ + ++ + K +E+
Sbjct: 478 AKQARELVSILSEAKQDIDPKLEEM 502
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 110/380 (28%), Positives = 190/380 (50%)
Query: 61 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH 120
TF +GL E ++ G +P+ +Q +P IL+ +DV+ AQ+G+GKTA F++ +L
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 121 RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH 180
L AL+++PTRELA Q+ + ALG ++++C +GG +L + L H
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRT-KFLVLDEADRVLDVGFEEELRVVFQCLPKNRQT 239
VV TPGR+ ++ + +R K LVLDEAD +L+ GF+E+L +++ LP Q
Sbjct: 147 VVSGTPGRVFDMIRRRN----LRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQV 202
Query: 240 LLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
+L SAT+ ++ + T+E +KQ ++ + + + + L +
Sbjct: 203 VLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDR---EEWKFDTLIDL 259
Query: 300 ED-MGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
D + I A++F +T R + ++H Q R + F++G +L
Sbjct: 260 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 319
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
++TDV +RGLD+P V LV+NYD+P Y +FV Q+DV ++ +
Sbjct: 320 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRD 379
Query: 419 IEAVVGKQLEEFECKEQEVL 438
IE Q++E +++
Sbjct: 380 IEQYYSTQIDEMPMNIADII 399
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 116/361 (32%), Positives = 173/361 (47%)
Query: 69 EWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY- 127
++ + + PTP+Q P L G+D++G+AQTGSGKT A+ LP + + PY
Sbjct: 99 QYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 158
Query: 128 ----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVI 183
G + LV+ PTRELA Q+ + G L+ + GG Q + L + I
Sbjct: 159 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 218
Query: 184 ATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 243
ATPGR+ LE R +LVLDEADR+LD+GFE ++R + + +RQTL++S
Sbjct: 219 ATPGRLIDFLEAGKTN---LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 275
Query: 244 ATMTSDLQTLLE-LSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDM 302
AT +++ L E + + Q ++ KD L+ ++ ++
Sbjct: 276 ATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE 335
Query: 303 GIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATD 362
IIFV T R C A+ +H KSQ +R L+ F+SG+A IL+ATD
Sbjct: 336 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 395
Query: 363 VASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAV 422
VASRGLD+ V V+NYD P DY +F T ++ E+ V
Sbjct: 396 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 455
Query: 423 V 423
+
Sbjct: 456 L 456
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 439 (159.6 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 118/355 (33%), Positives = 178/355 (50%)
Query: 44 EKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGL 103
E+ N DP T S F+ L + E ++ KE T +Q IP L+G+D++G
Sbjct: 33 ERINNYDPK-TDEASVSQFSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGT 91
Query: 104 AQTGSGKTAAFALPILHRLAEDP---Y-GVLALVITPTRELAYQLAEQFKALGSGLHLRC 159
A+TGSGKT AF +P++ L + Y G+ AL+++PTRELA Q+ E +G
Sbjct: 92 ARTGSGKTLAFLIPVIESLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKIGKYNTFSA 151
Query: 160 EVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLD 219
+V GG D+ + K ++R ++++ TPGRI L E + S + LVLDEADR LD
Sbjct: 152 GLVTGGKDVQFE-KERVSRMNILVGTPGRISQHLNEAVGMET--SNLQVLVLDEADRCLD 208
Query: 220 VGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSA---NKAYFYEAYEGFKTVETL 276
+GF++++ + LP RQTLLFSAT + + L LS NK E T E+L
Sbjct: 209 MGFKKQIDNILGHLPTTRQTLLFSATQSESVNDLARLSLTNPNKIGVSSDQEVSATPESL 268
Query: 277 KQQYIFIPKNVK-DVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVA 333
+Q Y+ +P + K DV + S ++ ++F S+ + +
Sbjct: 269 EQYYVKVPLDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLMK 324
Query: 334 LHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
L+ Q+ RL +F Q L ATD+ +RGLD P +D V+ D P Y
Sbjct: 325 LYGRHKQTSRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATY 379
Score = 45 (20.9 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 425 KQLEEFECKEQEVL--SDIT 442
KQ EEF KE+E + SDIT
Sbjct: 641 KQKEEFVNKERETMKISDIT 660
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/371 (30%), Positives = 187/371 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L + ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 154
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L + Q +
Sbjct: 155 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 241 LFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
L SATM +D L+ + + E T+E +KQ YI + + + + + L +
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEEL-TLEGIKQFYINVER---EEWKLDTLCDL 267
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D ALH Q +R + F+SG + +L
Sbjct: 268 YETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +
Sbjct: 328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 388 IETFYNTTVEE 398
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/371 (30%), Positives = 187/371 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L + ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 154
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L + Q +
Sbjct: 155 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 241 LFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
L SATM +D L+ + + E T+E +KQ YI + + + + + L +
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEEL-TLEGIKQFYINVER---EEWKLDTLCDL 267
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D ALH Q +R + F+SG + +L
Sbjct: 268 YETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +
Sbjct: 328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 388 IETFYNTTVEE 398
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/371 (30%), Positives = 187/371 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L + ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 154
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L + Q +
Sbjct: 155 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 241 LFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
L SATM +D L+ + + E T+E +KQ YI + + + + + L +
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEEL-TLEGIKQFYINVER---EEWKLDTLCDL 267
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D ALH Q +R + F+SG + +L
Sbjct: 268 YETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +
Sbjct: 328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 388 IETFYNTTVEE 398
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/371 (30%), Positives = 187/371 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L + ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 154
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L + Q +
Sbjct: 155 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 241 LFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
L SATM +D L+ + + E T+E +KQ YI + + + + + L +
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEEL-TLEGIKQFYINVER---EEWKLDTLCDL 267
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D ALH Q +R + F+SG + +L
Sbjct: 268 YETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +
Sbjct: 328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 388 IETFYNTTVEE 398
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 111/325 (34%), Positives = 177/325 (54%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
+ F+ L L ++ +G TP+Q +P IL G+DV+G +TGSGKTAAF L +L
Sbjct: 1 MAFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLL 60
Query: 120 HRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSLMNR 178
++L + + LV+ PTRELA Q+A++ + L G+H ++ + GG+ + Q SL +
Sbjct: 61 NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG 120
Query: 179 PHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
H+++ TPGRI L+ + D+ S LVLDEADR+L++GF+ +L + + P+ R
Sbjct: 121 AHIIVGTPGRIVDHLDRNRLDL----SNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRER 176
Query: 238 QTLLFSATMTSDLQTLL-ELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
QTLLFSAT +Q++ ++ N A K T++Q + + + + + +L
Sbjct: 177 QTLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKN--TIEQHFYQLDDDKSRMQALQLL 234
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+E SA++F +T R +ALH Q R L +F + A
Sbjct: 235 L-LEHKP-ESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSAC 292
Query: 357 ILLATDVASRGLDIPTVDLVLNYDI 381
+L+ATDVA+RGLDI +D V NY +
Sbjct: 293 VLVATDVAARGLDIDALDAVFNYHV 317
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 111/325 (34%), Positives = 177/325 (54%)
Query: 60 VTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL 119
+ F+ L L ++ +G TP+Q +P IL G+DV+G +TGSGKTAAF L +L
Sbjct: 1 MAFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLL 60
Query: 120 HRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGGMDLLTQAKSLMNR 178
++L + + LV+ PTRELA Q+A++ + L G+H ++ + GG+ + Q SL +
Sbjct: 61 NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG 120
Query: 179 PHVVIATPGRIKVLLEEDP-DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNR 237
H+++ TPGRI L+ + D+ S LVLDEADR+L++GF+ +L + + P+ R
Sbjct: 121 AHIIVGTPGRIVDHLDRNRLDL----SNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRER 176
Query: 238 QTLLFSATMTSDLQTLL-ELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVL 296
QTLLFSAT +Q++ ++ N A K T++Q + + + + + +L
Sbjct: 177 QTLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKN--TIEQHFYQLDDDKSRMQALQLL 234
Query: 297 SKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQAT 356
+E SA++F +T R +ALH Q R L +F + A
Sbjct: 235 L-LEHKP-ESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSAC 292
Query: 357 ILLATDVASRGLDIPTVDLVLNYDI 381
+L+ATDVA+RGLDI +D V NY +
Sbjct: 293 VLVATDVAARGLDIDALDAVFNYHV 317
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/371 (30%), Positives = 187/371 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L + ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 154
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L + Q +
Sbjct: 155 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 241 LFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
L SATM +D L+ + + E T+E +KQ YI + + + + + L +
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEEL-TLEGIKQFYINVER---EEWKLDTLCDL 267
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D ALH Q +R + F+SG + +L
Sbjct: 268 YETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +
Sbjct: 328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 388 IETFYNTTVEE 398
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/371 (30%), Positives = 187/371 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L + ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 154
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L + Q +
Sbjct: 155 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 241 LFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
L SATM +D L+ + + E T+E +KQ YI + + + + + L +
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEEL-TLEGIKQFYINVER---EEWKLDTLCDL 267
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D ALH Q +R + F+SG + +L
Sbjct: 268 YETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +
Sbjct: 328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 388 IETFYNTTVEE 398
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/371 (30%), Positives = 187/371 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F + L E ++ G +P+ +Q I ++G DV+ AQ+G+GKTA FA+ IL +
Sbjct: 36 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 95
Query: 122 LAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLM-NRPH 180
L + ALV+ PTRELA Q+ + ALG + C +GG ++ + + L PH
Sbjct: 96 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPH 155
Query: 181 VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 240
+V+ TPGR+ +L + P + K VLDEAD +L GF++++ +FQ L + Q +
Sbjct: 156 IVVGTPGRVFDMLNRRY-LSPKW--IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 212
Query: 241 LFSATMTSD-LQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKM 299
L SATM +D L+ + + E T+E +KQ YI + + + + + L +
Sbjct: 213 LLSATMPTDVLEVTKKFMRDPIRILVKKEEL-TLEGIKQFYINVER---EEWKLDTLCDL 268
Query: 300 -EDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
E + I A+IF++T R D ALH Q +R + F+SG + +L
Sbjct: 269 YETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 328
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+ +RG+D+ V LV+NYD+P +Y +FVT+ D ++ +
Sbjct: 329 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 388
Query: 419 IEAVVGKQLEE 429
IE +EE
Sbjct: 389 IETFYNTTVEE 399
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/348 (33%), Positives = 171/348 (49%)
Query: 83 PTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY-----GVLALVITPT 137
PTP+Q P L GKD++G+AQTGSGKT ++ LP + + P+ G + LV+ PT
Sbjct: 119 PTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLAPT 178
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA Q+ + G ++ + GG Q + L + IATPGR+ LE
Sbjct: 179 RELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK 238
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELS 257
R +LVLDEADR+LD+GFE ++R + + +RQTL++SAT +++ L E
Sbjct: 239 TN---LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAE-D 294
Query: 258 ANKAYFYEAYEGFKTV--ETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCR 315
K Y + + Q K+ L+ +L ++ IIFV T R
Sbjct: 295 FLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKR 354
Query: 316 SCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDL 375
C A+ +H K+Q +R L+ FK G+A IL+ATDVASRGLD+ V
Sbjct: 355 RCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKF 414
Query: 376 VLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVV 423
V+N+D P DY +F T N++ H++ +V+
Sbjct: 415 VINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVL 462
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 454 (164.9 bits), Expect = 5.8e-43, P = 5.8e-43
Identities = 116/347 (33%), Positives = 169/347 (48%)
Query: 83 PTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY-----GVLALVITPT 137
PTP+Q P L G+D++G+AQTGSGKT A+ LP + + PY G + LV+ PT
Sbjct: 115 PTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT 174
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA Q+ + G L+ + GG Q + L + IATPGR+ LE
Sbjct: 175 RELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLE-L 256
R +LVLDEADR+LD+GFE ++R + + +RQTL++SAT +++ L E
Sbjct: 235 TN---LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDF 291
Query: 257 SANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRS 316
+ + Q ++ KD L+ ++ ++ IIFV T R
Sbjct: 292 LRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRR 351
Query: 317 CHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLV 376
C A+ +H KSQ +R L+ F+SG+A IL+ATDVASRGLD+ V V
Sbjct: 352 CDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFV 411
Query: 377 LNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVV 423
+NYD P DY +F T ++ E+ V+
Sbjct: 412 INYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 458
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 454 (164.9 bits), Expect = 5.8e-43, P = 5.8e-43
Identities = 116/347 (33%), Positives = 169/347 (48%)
Query: 83 PTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY-----GVLALVITPT 137
PTP+Q P L G+D++G+AQTGSGKT A+ LP + + PY G + LV+ PT
Sbjct: 115 PTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT 174
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA Q+ + G L+ + GG Q + L + IATPGR+ LE
Sbjct: 175 RELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLE-L 256
R +LVLDEADR+LD+GFE ++R + + +RQTL++SAT +++ L E
Sbjct: 235 TN---LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDF 291
Query: 257 SANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRS 316
+ + Q ++ KD L+ ++ ++ IIFV T R
Sbjct: 292 LRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRR 351
Query: 317 CHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLV 376
C A+ +H KSQ +R L+ F+SG+A IL+ATDVASRGLD+ V V
Sbjct: 352 CDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFV 411
Query: 377 LNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVV 423
+NYD P DY +F T ++ E+ V+
Sbjct: 412 INYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 458
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 454 (164.9 bits), Expect = 5.8e-43, P = 5.8e-43
Identities = 116/347 (33%), Positives = 169/347 (48%)
Query: 83 PTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY-----GVLALVITPT 137
PTP+Q P L G+D++G+AQTGSGKT A+ LP + + PY G + LV+ PT
Sbjct: 115 PTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT 174
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA Q+ + G L+ + GG Q + L + IATPGR+ LE
Sbjct: 175 RELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLE-L 256
R +LVLDEADR+LD+GFE ++R + + +RQTL++SAT +++ L E
Sbjct: 235 TN---LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDF 291
Query: 257 SANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRS 316
+ + Q ++ KD L+ ++ ++ IIFV T R
Sbjct: 292 LRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRR 351
Query: 317 CHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDLV 376
C A+ +H KSQ +R L+ F+SG+A IL+ATDVASRGLD+ V V
Sbjct: 352 CDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFV 411
Query: 377 LNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVV 423
+NYD P DY +F T ++ E+ V+
Sbjct: 412 INYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 458
>UNIPROTKB|E1BGI6 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
Length = 877
Score = 462 (167.7 bits), Expect = 6.1e-43, P = 6.1e-43
Identities = 114/369 (30%), Positives = 185/369 (50%)
Query: 62 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHR 121
F +GL+ + + G + PTP+Q IP IL+GKDV+ +A+TGSGKTA F +P+ R
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPMILDGKDVVAMARTGSGKTACFLIPMFER 157
Query: 122 LAEDPY--GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRP 179
L G AL+++PTRELA Q + K LG L+ +++GG + Q +L P
Sbjct: 158 LKTHSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENP 217
Query: 180 HVVIATPGR-IKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 238
++IATPGR + V +E + + V +++V DEADR+ ++GF E+L+ + LP Q
Sbjct: 218 DIIIATPGRLVHVAVEMNLKLQSV----EYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQ 273
Query: 239 TLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSK 298
T+LFSAT+ L + K E LK + + ++ K L+H+L
Sbjct: 274 TVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRN 333
Query: 299 MEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATIL 358
+ ++ ++FV+T ++S Q+ R L RF G+ + L
Sbjct: 334 VVRPQDQT-VVFVATKHHAEYLSELLATQGVSCAHIYSALDQTARKINLARFTHGKCSAL 392
Query: 359 LATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHE 418
+ TD+A+RGLDIP +D V+NY P + + S V ++V + +
Sbjct: 393 IVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLD 452
Query: 419 IEAVVGKQL 427
+ +G+ L
Sbjct: 453 LHLFLGRAL 461
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 107/382 (28%), Positives = 190/382 (49%)
Query: 52 NSTTTDSTV----TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTG 107
N T T S V TF +GL E ++ G +P+ +Q I I++G+D + AQ+G
Sbjct: 20 NETFTSSEVEVKPTFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSG 79
Query: 108 SGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 167
+GKTA F++ L + + L+++PTRELA Q+ + AL ++++ VGG +
Sbjct: 80 TGKTATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKN 139
Query: 168 LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELR 227
L K L H+V TPGR+ ++ +P K ++LDEAD +L +GF++++
Sbjct: 140 LSDDVKKLETGVHIVSGTPGRVLDMITRK-SLPT--RHIKMMILDEADEMLSLGFQQQIN 196
Query: 228 VVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNV 287
V++ LP Q +L SAT+T D+ ++ E K T++ +KQ ++ + K
Sbjct: 197 DVYRYLPNGTQIVLVSATLTQDVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEK-- 254
Query: 288 KDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRLSAL 347
+D + + + I A+IF +T + + ++H Q +R +
Sbjct: 255 EDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEII 314
Query: 348 HRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSF 407
F+SG+ +L+ TD+ +RG+D+ V LV+NYD+P +Y +F
Sbjct: 315 KSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINF 374
Query: 408 VTQNDVDLIHEIEAVVGKQLEE 429
V +D+ ++ +IE Q++E
Sbjct: 375 VKNSDIRILRDIEQFYSTQIDE 396
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 454 (164.9 bits), Expect = 7.6e-43, P = 7.6e-43
Identities = 124/346 (35%), Positives = 185/346 (53%)
Query: 63 AGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-HR 121
AG G A ++ G +PTPVQ H IP +L +D++ AQTGSGKTAAF LPI+ H
Sbjct: 144 AGFGPA--VMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 201
Query: 122 LAEDP--------------YGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 167
LA P Y ALV++PTRELA Q+ ++ +++ ++ GG +
Sbjct: 202 LAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRE 261
Query: 168 -LLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEEL 226
Q L H++IATPGR+ ++E+ I + ++LVLDEADR+LD+GFE ++
Sbjct: 262 NYRDQVNRLRAGTHILIATPGRLIDIIEQG-FIG--LAGCRYLVLDEADRMLDMGFEPQI 318
Query: 227 R-VVFQCLPKN--RQTLLFSATMTSDLQTLLELSANKAYFYEAYEGF-KTVETLKQQYIF 282
R +V Q +P R T +FSAT ++Q L + Y + A T E ++Q+ ++
Sbjct: 319 RKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLW 378
Query: 283 IPKNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQ 342
+ + K LM +L M + ++FV T R + +V++H Q +
Sbjct: 379 VNEMEKRSNLMEIL--MNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIE 436
Query: 343 RLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDY 388
R L F+SGQ IL+AT VA+RGLDIP V V+NYD+P +Y
Sbjct: 437 RERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 482
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 116/365 (31%), Positives = 180/365 (49%)
Query: 83 PTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY-----GVLALVITPT 137
PT +Q P L G D++G+AQTGSGKT ++ LP + + P+ G + LV+ PT
Sbjct: 105 PTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPT 164
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA Q+ + L+ + GG Q + L + IATPGR+ LE
Sbjct: 165 RELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK 224
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELS 257
R +LVLDEADR+LD+GFE ++R + + +RQTL++SAT +++ L E
Sbjct: 225 TN---LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAE-D 280
Query: 258 ANKAYFYEAYEGFKTVETLK-QQYIFIPKNV-KDVYLMHVLSKMEDMGIRSAIIFVSTCR 315
K Y + + Q + + +V KD L+ ++ ++ I+FV T R
Sbjct: 281 FLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKR 340
Query: 316 SCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDL 375
C A+ +H KSQ +R L+ FK G+A IL+ATDVASRGLD+ V
Sbjct: 341 RCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKF 400
Query: 376 VLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQ 435
V+NYD P DY +F T N++ ++++ +V+ + + K
Sbjct: 401 VINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLL 460
Query: 436 EVLSD 440
+++ D
Sbjct: 461 QLIED 465
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 116/365 (31%), Positives = 180/365 (49%)
Query: 83 PTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPY-----GVLALVITPT 137
PT +Q P L G D++G+AQTGSGKT ++ LP + + P+ G + LV+ PT
Sbjct: 113 PTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPT 172
Query: 138 RELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIATPGRIKVLLEEDP 197
RELA Q+ + L+ + GG Q + L + IATPGR+ LE
Sbjct: 173 RELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK 232
Query: 198 DIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELS 257
R +LVLDEADR+LD+GFE ++R + + +RQTL++SAT +++ L E
Sbjct: 233 TN---LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAE-D 288
Query: 258 ANKAYFYEAYEGFKTVETLK-QQYIFIPKNV-KDVYLMHVLSKMEDMGIRSAIIFVSTCR 315
K Y + + Q + + +V KD L+ ++ ++ I+FV T R
Sbjct: 289 FLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKR 348
Query: 316 SCHXXXXXXXXXDQEAVALHSFKSQSQRLSALHRFKSGQATILLATDVASRGLDIPTVDL 375
C A+ +H KSQ +R L+ FK G+A IL+ATDVASRGLD+ V
Sbjct: 349 RCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKF 408
Query: 376 VLNYDIPRYPRDYXXXXXXXXXXXXXXXXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQ 435
V+NYD P DY +F T N++ ++++ +V+ + + K
Sbjct: 409 VINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLL 468
Query: 436 EVLSD 440
+++ D
Sbjct: 469 QLIED 473
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 132/417 (31%), Positives = 197/417 (47%)
Query: 47 TNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQT 106
T+ + T V FA LGL E + +G T +Q IP +L GKDVLG AQT
Sbjct: 2 TDQKTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQT 61
Query: 107 GSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLH-LRCEVVVGG 165
G+GKTAAF LP L ++ +V+ PTRELA Q+AE ++ G + LR + GG
Sbjct: 62 GTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGG 121
Query: 166 MDLLTQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEE 225
Q + L VV+ TPGR+ L + VLDEAD +L++GF E+
Sbjct: 122 QSYGPQFQQLERGAQVVVGTPGRLMDHLRRKS---LKLDELRVCVLDEADEMLNMGFLED 178
Query: 226 LRVVFQCLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKT--VETLKQQYIFI 283
++ + +PK Q LFSATM ++ + AN+ F + E K V+ K
Sbjct: 179 IQWILDHIPKTAQMCLFSATMPPAIRKI----ANR--FLKDPEHIKVAAVKKAKANITQY 232
Query: 284 PKNVKDVYLMHVLSKMEDMGIRSA-IIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQ 342
V + M L ++ ++ A IIFV T A+AL+ +Q+Q
Sbjct: 233 AWKVSGITKMTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQ 292
Query: 343 RLSALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXX 402
R + + KSG+++IL+ATDV +RGLDIP + LV+NYD+P Y
Sbjct: 293 RERCIDQMKSGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRIGRTGRAGREG 352
Query: 403 XXXSFVTQNDVDLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKAR-RVATMKLMDD 458
+FV ++ I E + + ++ + DI ++ R RV K++ D
Sbjct: 353 MSIAFVRPREMYSIRHYERLTNGTVLNYDLPN---IQDIGKIRIERTRVEVAKIVAD 406
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 126/387 (32%), Positives = 200/387 (51%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+ST+ F LGL ++ ++ T +Q IP + G+D+L ++TGSGKT AF L
Sbjct: 2 ESTLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVL 61
Query: 117 PILHRL-------AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 169
P+LH+ A+DP G L++ PTRELA Q+ + +++ GL ++ GG +
Sbjct: 62 PMLHKSLKTKAFSAKDPRG---LILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFN 118
Query: 170 TQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSR-TKFLVLDEADRVLDVGFEEELRV 228
Q K+L P ++ATPGR L + D +F + LVLDEADR+LD+GF +ELR
Sbjct: 119 DQVKALARGPRFIVATPGR----LADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRR 174
Query: 229 VFQCLP-KNRQTLLFSATMT-SDLQTL-LELSANKAYFYEAYEGFKTVETLKQQ-YIFIP 284
+ + RQTL+FSAT+ +D+ + +EL N+ G + + + Q Y+
Sbjct: 175 IHNAAKHRRRQTLMFSATLDHADVNDMAMEL-LNEPKRIAIGVGSEEHKDITQHFYLCDH 233
Query: 285 KNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRL 344
+ K+ L +L+ E R IIF +T + +AVAL +Q+QR
Sbjct: 234 LDHKEALLDRILADAE---YRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRN 290
Query: 345 SALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXX 404
+ + +F+ IL+ TDVASRGLDIP V V+N+D+P++ +Y
Sbjct: 291 TIMGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDA 350
Query: 405 XSFVTQNDVDLIHEIEAVVGKQLEEFE 431
S V D + +EA + ++++ FE
Sbjct: 351 MSLVGPKDWESFKRVEAFLQQEIQ-FE 376
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 126/387 (32%), Positives = 200/387 (51%)
Query: 57 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFAL 116
+ST+ F LGL ++ ++ T +Q IP + G+D+L ++TGSGKT AF L
Sbjct: 2 ESTLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVL 61
Query: 117 PILHRL-------AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 169
P+LH+ A+DP G L++ PTRELA Q+ + +++ GL ++ GG +
Sbjct: 62 PMLHKSLKTKAFSAKDPRG---LILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFN 118
Query: 170 TQAKSLMNRPHVVIATPGRIKVLLEEDPDIPPVFSR-TKFLVLDEADRVLDVGFEEELRV 228
Q K+L P ++ATPGR L + D +F + LVLDEADR+LD+GF +ELR
Sbjct: 119 DQVKALARGPRFIVATPGR----LADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRR 174
Query: 229 VFQCLP-KNRQTLLFSATMT-SDLQTL-LELSANKAYFYEAYEGFKTVETLKQQ-YIFIP 284
+ + RQTL+FSAT+ +D+ + +EL N+ G + + + Q Y+
Sbjct: 175 IHNAAKHRRRQTLMFSATLDHADVNDMAMEL-LNEPKRIAIGVGSEEHKDITQHFYLCDH 233
Query: 285 KNVKDVYLMHVLSKMEDMGIRSAIIFVSTCRSCHXXXXXXXXXDQEAVALHSFKSQSQRL 344
+ K+ L +L+ E R IIF +T + +AVAL +Q+QR
Sbjct: 234 LDHKEALLDRILADAE---YRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRN 290
Query: 345 SALHRFKSGQATILLATDVASRGLDIPTVDLVLNYDIPRYPRDYXXXXXXXXXXXXXXXX 404
+ + +F+ IL+ TDVASRGLDIP V V+N+D+P++ +Y
Sbjct: 291 TIMGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDA 350
Query: 405 XSFVTQNDVDLIHEIEAVVGKQLEEFE 431
S V D + +EA + ++++ FE
Sbjct: 351 MSLVGPKDWESFKRVEAFLQQEIQ-FE 376
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 456 (165.6 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 111/328 (33%), Positives = 177/328 (53%)
Query: 70 W-AVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRL--AE-D 125
W ++ K+ +PT +Q I L G DV+G A+TGSGKT A +P+L L A+
Sbjct: 85 WRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWS 144
Query: 126 P-YGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPHVVIA 184
P YG+ AL+I+PTRELA Q A+G+ C +V+GG D+ + ++ ++ ++++
Sbjct: 145 PDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVC 203
Query: 185 TPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSA 244
TPGR+ ++E+ + + LVLDEADR+LD+GF ++L + LP RQTLLFSA
Sbjct: 204 TPGRLLQHMDENAQMS--CDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSA 261
Query: 245 TMTSDLQTLLELSANKAYFYEAYEGFK--TVETLKQQYIFIPKNVKDVYLMHVLSKMEDM 302
T T +++ L + N F +E T + LKQ Y+ + + K + + S +E
Sbjct: 262 TQTRNVKDLCRVCTNDPVFVSVHENASAATPDNLKQSYVIVEEEHK---INALWSFIEAH 318
Query: 303 GIRSAIIFVSTCRSCHXXXXXXXXXDQ--EAVALHSFKSQSQRLSALHRFKSGQATILLA 360
+ +++FVS+C+ + L +Q +R+ +F +A +L+A
Sbjct: 319 RKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIA 378
Query: 361 TDVASRGLDIPTVDLVLNYDIPRYPRDY 388
TDVASRGLD +D V+ D P DY
Sbjct: 379 TDVASRGLDFEHIDWVIQVDCPAQIDDY 406
WARNING: HSPs involving 653 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 493 427 0.00085 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 903
No. of states in DFA: 599 (64 KB)
Total size of DFA: 230 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.89u 0.10s 32.99t Elapsed: 00:00:01
Total cpu time: 32.95u 0.10s 33.05t Elapsed: 00:00:01
Start: Mon May 20 19:01:36 2013 End: Mon May 20 19:01:37 2013
WARNINGS ISSUED: 2