Query 011103
Match_columns 493
No_of_seqs 132 out of 1401
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 20:52:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011103.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011103hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 5E-108 2E-112 878.6 46.0 459 31-493 2-461 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 3E-107 9E-112 874.1 49.5 460 30-493 1-461 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 7E-109 3E-113 883.0 36.3 458 30-493 1-459 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 3E-108 1E-112 880.7 37.6 460 30-493 2-462 (545)
5 3p9d_C T-complex protein 1 sub 100.0 9.4E-92 3.2E-96 757.9 33.7 437 4-493 1-520 (590)
6 3ko1_A Chaperonin; 9-fold symm 100.0 3.1E-88 1.1E-92 728.4 43.6 405 6-493 14-466 (553)
7 1q3q_A Thermosome alpha subuni 100.0 9.6E-88 3.3E-92 725.0 41.5 410 1-493 1-459 (548)
8 3ruv_A Chaperonin, CPN; double 100.0 1.1E-87 3.7E-92 723.9 40.8 392 36-493 16-452 (543)
9 1a6d_B Thermosome (beta subuni 100.0 5.6E-87 1.9E-91 718.9 43.1 406 5-493 4-457 (543)
10 1a6d_A Thermosome (alpha subun 100.0 3.6E-87 1.2E-91 720.1 41.0 403 7-493 7-456 (545)
11 3iyg_H T-complex protein 1 sub 100.0 3E-86 1E-90 708.6 44.5 393 40-493 10-448 (515)
12 3p9d_A T-complex protein 1 sub 100.0 4.2E-87 1.4E-91 721.0 37.3 402 31-493 16-470 (559)
13 3iyg_B T-complex protein 1 sub 100.0 1.1E-85 3.7E-90 704.4 44.3 394 33-493 4-445 (513)
14 3p9d_G T-complex protein 1 sub 100.0 2.3E-87 7.8E-92 721.8 30.2 409 4-493 6-461 (550)
15 3p9d_D T-complex protein 1 sub 100.0 1.1E-86 3.7E-91 713.9 34.1 401 31-493 11-462 (528)
16 3iyg_A T-complex protein 1 sub 100.0 2.5E-85 8.4E-90 704.1 42.9 399 34-493 5-454 (529)
17 3iyg_E T-complex protein 1 sub 100.0 1.3E-84 4.6E-89 696.8 44.7 395 33-493 4-448 (515)
18 3p9d_E T-complex protein 1 sub 100.0 5.7E-85 2E-89 704.8 39.8 402 32-493 38-491 (562)
19 3iyg_D T-complex protein 1 sub 100.0 2.4E-84 8.4E-89 694.7 43.2 393 35-493 7-452 (518)
20 3iyg_G T-complex protein 1 sub 100.0 4.7E-84 1.6E-88 692.1 44.1 390 40-493 8-447 (515)
21 3p9d_B T-complex protein 1 sub 100.0 3.6E-85 1.2E-89 703.0 32.2 396 31-493 9-452 (527)
22 3iyg_Q T-complex protein 1 sub 100.0 2.5E-83 8.6E-88 686.5 42.8 389 40-493 10-444 (512)
23 3p9d_H T-complex protein 1 sub 100.0 8.4E-84 2.9E-88 696.5 34.8 405 7-493 10-471 (568)
24 3iyg_Z T-complex protein 1 sub 100.0 8.4E-83 2.9E-87 682.2 41.2 389 40-493 9-451 (517)
25 3p9d_F T-complex protein 1 sub 100.0 2E-82 6.7E-87 683.9 31.5 395 33-493 11-466 (546)
26 3aq1_B Thermosome subunit; gro 100.0 2.3E-76 7.8E-81 630.6 34.4 361 69-493 1-410 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 5.9E-48 2E-52 351.0 15.9 193 216-408 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.6E-46 5.3E-51 342.3 16.5 189 218-406 11-199 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 7.5E-36 2.6E-40 259.5 14.4 144 221-364 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 1.3E-22 4.3E-27 187.6 13.7 133 212-368 1-161 (178)
31 1ass_A Thermosome; chaperonin, 99.8 4.2E-19 1.4E-23 160.8 14.1 127 219-368 1-154 (159)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5e-108 Score=878.65 Aligned_cols=459 Identities=45% Similarity=0.777 Sum_probs=448.3
Q ss_pred cceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 011103 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (493)
Q Consensus 31 ~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~ 110 (493)
+|+|.|| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||+|+|+++||+||+||+|++++|++
T Consensus 2 ~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 79 (547)
T 1kp8_A 2 AKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASK 79 (547)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHh
Confidence 6999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccChH-HHHHHHHHhcCCchhHhH
Q 011103 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVGK 189 (493)
Q Consensus 111 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~L~~va~ts~~~~~~l~~ 189 (493)
||+++||||||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++++|+++. .|.++|++|++++++|++
T Consensus 80 qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~ 159 (547)
T 1kp8_A 80 ANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGK 159 (547)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHH
T ss_pred hccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCceEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEecccCCCHHHHHHHHHHH
Q 011103 190 MISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSA 269 (493)
Q Consensus 190 li~~Ai~~v~~~g~I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~el~~~le~i 269 (493)
+++||+.+++++|.|++++|++++||+++++|++|+++|.||||++++++|+++++||+|+++|++|+++++++++++++
T Consensus 160 liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i 239 (547)
T 1kp8_A 160 LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV 239 (547)
T ss_dssp HHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHH
T ss_pred HHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccce
Q 011103 270 VKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTA 349 (493)
Q Consensus 270 ~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~ 349 (493)
.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+|+++++.+|+|||++|||++++++.|++++++++++||+|
T Consensus 240 ~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a 319 (547)
T 1kp8_A 240 AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQA 319 (547)
T ss_dssp HGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEE
T ss_pred HhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999988989999999999999
Q ss_pred eEEEEecCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHH
Q 011103 350 IKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDAL 429 (493)
Q Consensus 350 ~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl 429 (493)
+.|++++++|+||+||++++.+++|+++|+.+++.++++|+|++|+||+++|+++++||+|||+|+.+++|+||+++|||
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl 399 (547)
T 1kp8_A 320 KRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL 399 (547)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 430 NATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 430 ~a~~~al~~gvvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
|++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||++||+|||+++
T Consensus 400 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip~~la~NaG~d~ 461 (547)
T 1kp8_A 400 HATRAAVEEGVVAGGGVALIRVASKLADLRG-QNADQN-VGIKVALRAMEAPLRQIVLNCGEEP 461 (547)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHHHH-HHHHHHHHHTTHHHHHHHHHHTSCH
T ss_pred HHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999998875 556555 6999999999999999999999974
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.6e-107 Score=874.08 Aligned_cols=460 Identities=47% Similarity=0.775 Sum_probs=448.7
Q ss_pred ccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 011103 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (493)
Q Consensus 30 ~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~ 109 (493)
|+|+|.|| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||+|+|+++||+||+||+|++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (543)
T 1we3_A 1 MAKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVAS 78 (543)
T ss_dssp -CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHH
Confidence 57999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccChH-HHHHHHHHhcCCchhHh
Q 011103 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (493)
Q Consensus 110 ~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~L~~va~ts~~~~~~l~ 188 (493)
+||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. .|.++|++|++ ++.|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~ 157 (543)
T 1we3_A 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVG 157 (543)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999998 89999
Q ss_pred HHHHHHHHhhccCCceEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEecccCCCHHHHHHHHHH
Q 011103 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (493)
Q Consensus 189 ~li~~Ai~~v~~~g~I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~el~~~le~ 268 (493)
++++||+.+++++|.|++++|++++||+++++|++|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~ 237 (543)
T 1we3_A 158 KLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ 237 (543)
T ss_dssp HHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccc
Q 011103 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (493)
Q Consensus 269 i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~ 348 (493)
+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++.+|+|||++|||+++++++|++++++++++||+
T Consensus 238 i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~ 317 (543)
T 1we3_A 238 VAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR 317 (543)
T ss_dssp HHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE
T ss_pred HHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred eeEEEEecCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHH
Q 011103 349 AIKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDA 428 (493)
Q Consensus 349 ~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dA 428 (493)
|+.|++++++|+||+||++++.+.+|+++|+.+++.++++|++++|+||+++|+++++||+|||+|+.+++|++|+++||
T Consensus 318 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DA 397 (543)
T 1we3_A 318 AERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDA 397 (543)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 429 LNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 429 l~a~~~al~~gvvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
||++|+++++|+|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+++
T Consensus 398 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 461 (543)
T 1we3_A 398 LNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEG 461 (543)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHTTHHHHHHHHHHTSCH
T ss_pred HHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH-HHHHHHHHHHHHHHHHHHHHCCCCH
Confidence 999999999999999999999999999999877777666 6999999999999999999999974
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=7.5e-109 Score=882.97 Aligned_cols=458 Identities=45% Similarity=0.766 Sum_probs=378.6
Q ss_pred ccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 011103 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (493)
Q Consensus 30 ~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~ 109 (493)
|+|.|.|| +++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||+|+|+++||++|+||||++++|+
T Consensus 1 ~~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~ 78 (546)
T 3rtk_A 1 MAKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK 78 (546)
T ss_dssp --------------------------------------------------------------CCCHHHHHHHHHHHHHHT
T ss_pred CCceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHH
Confidence 68999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccChH-HHHHHHHHhcCCchhHh
Q 011103 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (493)
Q Consensus 110 ~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~L~~va~ts~~~~~~l~ 188 (493)
+||+++||||||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++++|+++. +|.++|++|++ ++.++
T Consensus 79 ~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~ 157 (546)
T 3rtk_A 79 KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIG 157 (546)
T ss_dssp SCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999998 88999
Q ss_pred HHHHHHHHhhccCCceEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEecccCCCHHHHHHHHHH
Q 011103 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (493)
Q Consensus 189 ~li~~Ai~~v~~~g~I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~el~~~le~ 268 (493)
++++||+.+++++|+|+++.++...+.+++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~ 237 (546)
T 3rtk_A 158 DLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK 237 (546)
T ss_dssp HHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH
T ss_pred HHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH
Confidence 99999999999999999887767654449999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccc
Q 011103 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (493)
Q Consensus 269 i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~ 348 (493)
+.+.|+|||||+++|+++++++|+.|+++|+++|+|||+|+|++.++.+|+|||++|||++++++++++++++++++||+
T Consensus 238 I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~ 317 (546)
T 3rtk_A 238 VIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK 317 (546)
T ss_dssp HHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHH
Q 011103 349 AIKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDA 428 (493)
Q Consensus 349 ~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dA 428 (493)
|+.|++++++|+||+||+++++++.|+++|++++++++++|++++|+||+++|+|+++||+|||+|+.+++|+||+++||
T Consensus 318 a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DA 397 (546)
T 3rtk_A 318 ARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDA 397 (546)
T ss_dssp EEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 429 LNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 429 l~a~~~al~~gvvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
||++|+++++|+|||||++|++++.+|++++ .++.+| +++++|++||+.||+|||+|||+++
T Consensus 398 l~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 459 (546)
T 3rtk_A 398 VRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDEA-TGANIVKVALEAPLKQIAFNSGLEP 459 (546)
T ss_dssp HHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTHH-HHHHHHHHHTTHHHHHHHTTTTCCH
T ss_pred HHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999887 667676 5999999999999999999999984
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.2e-108 Score=880.71 Aligned_cols=460 Identities=46% Similarity=0.780 Sum_probs=406.9
Q ss_pred ccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 011103 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (493)
Q Consensus 30 ~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~ 109 (493)
|+|.|.|| +++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||+|+|+++||+||+||+|++++|+
T Consensus 2 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~ 79 (545)
T 1iok_A 2 AAKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVAS 79 (545)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred Cchhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHH
Confidence 68999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccChH-HHHHHHHHhcCCchhHh
Q 011103 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (493)
Q Consensus 110 ~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~L~~va~ts~~~~~~l~ 188 (493)
+||+++||||||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++++|+++. .|.++|++|+++++.|+
T Consensus 80 ~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~ 159 (545)
T 1iok_A 80 RTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIG 159 (545)
T ss_dssp HGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHH
T ss_pred hhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEecccCCCHHHHHHHHHH
Q 011103 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (493)
Q Consensus 189 ~li~~Ai~~v~~~g~I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~el~~~le~ 268 (493)
++++||+.+++++|.|++++|++++||+++++|++|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 160 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~ 239 (545)
T 1iok_A 160 QQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES 239 (545)
T ss_dssp HHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------
T ss_pred HHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccc
Q 011103 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (493)
Q Consensus 269 i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~ 348 (493)
+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+|+++++.+|+|||++|||++++++++++++++++++||+
T Consensus 240 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~ 319 (545)
T 1iok_A 240 VIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR 319 (545)
T ss_dssp ----CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998898999999999999
Q ss_pred eeEEEEecCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHH
Q 011103 349 AIKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDA 428 (493)
Q Consensus 349 ~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dA 428 (493)
|+.|++++++|+||+||++++++++|+++++++++.++++|++++|+||+++|+++++||+|||+|+.+++|+||+++||
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DA 399 (545)
T 1iok_A 320 AKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDA 399 (545)
T ss_dssp EEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 429 LNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 429 l~a~~~al~~gvvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
||++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||++||+|||+++
T Consensus 400 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 462 (545)
T 1iok_A 400 LNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSDQD-AGIAIIRRALEAPMRQIAENAGVDG 462 (545)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHHHH-HHHHHHHHHTTHHHHHHHHHHTSCH
T ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999998876 556555 6999999999999999999999974
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=9.4e-92 Score=757.91 Aligned_cols=437 Identities=19% Similarity=0.299 Sum_probs=368.8
Q ss_pred CCcceEEeecCCCCCCCCCCCCccccccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecCh
Q 011103 4 LSTPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDG 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG 83 (493)
|.+|+++|+++++|.. | .++|..|+.||..|+++|++||||+||||||++++|+|+|||||
T Consensus 1 ~~~~~~~~~~~~~~~~-----------------g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG 61 (590)
T 3p9d_C 1 MQAPVVFMNASQERTT-----------------G--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDG 61 (590)
T ss_dssp -----CCSCTTCCBCT-----------------T--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCH
T ss_pred CCCCeEeecCCcchhh-----------------H--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCH
Confidence 5689999999988876 5 78999999999999999999999999999999999999999999
Q ss_pred HHHhccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHH
Q 011103 84 ETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKV-IAAGMNPVQIARGIEKTSKALLSELK 162 (493)
Q Consensus 84 ~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~l-i~~Gi~p~~I~~G~~~a~~~~l~~L~ 162 (493)
+||+++|+++||+ |+|++++|++||+++||||||+|+||++||+++.++ +++|+||+.|++||++|.+.++++|+
T Consensus 62 ~TIlk~i~~~hP~----Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~ 137 (590)
T 3p9d_C 62 HAILREIDVAHPA----AKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIK 137 (590)
T ss_dssp HHHHHHSCCCCHH----HHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCHH----HHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hcCcccCh--H-HHHHHHHHhcCC------chhHhHHHHHHHHhhccCCc------------------eEeecCCCcccc
Q 011103 163 LTSREVED--H-ELADVAAVSAGN------DYTVGKMISDALQQVGRNGV------------------VTIEKGKCTENS 215 (493)
Q Consensus 163 ~~s~~v~~--~-~L~~va~ts~~~------~~~l~~li~~Ai~~v~~~g~------------------I~v~~G~~~~ds 215 (493)
++++|++. . .|.++|+||+++ ++.|+++++||+.++++++. |.+.+|+++.||
T Consensus 138 ~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds 217 (590)
T 3p9d_C 138 QVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS 217 (590)
T ss_dssp HHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC
T ss_pred HHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc
Confidence 99999874 3 899999998753 68999999999999987642 334579999999
Q ss_pred eeeeeceEEecccCCCccccCcCCceeEecceeEEEeccc-------------CCCHHHHHHHH-----------HHHHH
Q 011103 216 LEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDMFKIL-----------DSAVK 271 (493)
Q Consensus 216 ~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~el~~~l-----------e~i~~ 271 (493)
++++||+|++++.+| +|+++++||||+++|++ |++++++.+++ +++.+
T Consensus 218 -~lv~Gmvfdk~~~~~-------~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~ 289 (590)
T 3p9d_C 218 -RVLKGVLLNKDVVHP-------KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILA 289 (590)
T ss_dssp -BCCSSEEECCCCSCT-------TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eeeeEEEEecccCCC-------CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998876 47788999999999984 45666766654 67888
Q ss_pred cCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccc-ee
Q 011103 272 EKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT-AI 350 (493)
Q Consensus 272 ~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~-~~ 350 (493)
.|++|||++++|+++++++|..++ |+| |+++++.+|+|||++|||++++ +++++++++||+ |+
T Consensus 290 ~g~~vII~e~~I~d~Al~~L~k~~------I~a-----v~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~ 353 (590)
T 3p9d_C 290 VRPTLVITEKGVSDLAQHYLLKGG------CSV-----LRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCG 353 (590)
T ss_dssp TCCSEECCSSCCCTHHHHHHHHTT------CCC-----CCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCS
T ss_pred cCCcEEEecCCcCHHHHHHHHhcc------cee-----eccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCC
Confidence 999999999999999999998774 554 5588999999999999999999 589999999999 99
Q ss_pred EEE---EecCeEEEEecCCChhh--------------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHhhh
Q 011103 351 KVV---ITKDSTLIVTDGSTRAA--------------------------VEKRISEIRSLAEITEERFQKNILNERIARL 401 (493)
Q Consensus 351 ~v~---i~~~~~~~~~g~~~~~~--------------------------i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l 401 (493)
.|+ +++++|+||+||++++. |++|+++|+.+++.++++|+++ +++|
T Consensus 354 ~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l 428 (590)
T 3p9d_C 354 LFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHG 428 (590)
T ss_dssp EEECCEETTEECEEECC--------------------------------------------------------------C
T ss_pred EEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhh
Confidence 997 46899999999999888 9999999999999999999966 4789
Q ss_pred cCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHH
Q 011103 402 SGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSY 480 (493)
Q Consensus 402 ~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~ 480 (493)
+|+++||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++++.+|++++.++++.+| +|+++|++||+.
T Consensus 429 ~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ 507 (590)
T 3p9d_C 429 SGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMEC 507 (590)
T ss_dssp CCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTH
T ss_pred cCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHH
Confidence 99999999999999999999999999999999999995 9999999999999999999888888777 589999999999
Q ss_pred HHHHHHHhcCCCC
Q 011103 481 PTKLIAKNAGPIQ 493 (493)
Q Consensus 481 i~~~L~~NaG~~~ 493 (493)
||++||+|||+++
T Consensus 508 ip~~La~NaG~d~ 520 (590)
T 3p9d_C 508 IPRTLIQNAGGDP 520 (590)
T ss_dssp HHHHHHHTTCSCH
T ss_pred HHHHHHHHcCCCH
Confidence 9999999999984
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=3.1e-88 Score=728.36 Aligned_cols=405 Identities=22% Similarity=0.373 Sum_probs=362.9
Q ss_pred cceEEeecCCCCCCCCCCCCccccccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHH
Q 011103 6 TPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGET 85 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~t 85 (493)
+|+++|+++++|.+ | .++|..|+.||+.|+++|++||||+||||||+++.|+|+|||||+|
T Consensus 14 ~~~~~l~~~~~~~~-----------------g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~t 74 (553)
T 3ko1_A 14 IPVIILKEGSSRTY-----------------G--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGAT 74 (553)
T ss_dssp -------------------------------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHH
T ss_pred CeEEEEecCcccch-----------------h--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccc
Confidence 79999999887766 6 7899999999999999999999999999999999999999999999
Q ss_pred HhccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcC
Q 011103 86 VLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTS 165 (493)
Q Consensus 86 Il~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s 165 (493)
|||+|+++||+ |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|.+.++++|++++
T Consensus 75 Ilk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s 150 (553)
T 3ko1_A 75 ILDKMDLQHPA----AKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELA 150 (553)
T ss_dssp HHHSSCCCSHH----HHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhhhhccChh----HHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhc
Confidence 99999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC--hH-HHHHHHHHhcCC------chhHhHHHHHHHHhhccC--Cc-------eEe--ecCCCcccceeeeeceEEe
Q 011103 166 REVE--DH-ELADVAAVSAGN------DYTVGKMISDALQQVGRN--GV-------VTI--EKGKCTENSLEIVEGMRFD 225 (493)
Q Consensus 166 ~~v~--~~-~L~~va~ts~~~------~~~l~~li~~Ai~~v~~~--g~-------I~v--~~G~~~~ds~~~i~G~~~~ 225 (493)
++++ +. .|.++|+||+++ +++|+++++||+.+++++ |. |++ .+|+++.|| ++++|++|+
T Consensus 151 ~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~d 229 (553)
T 3ko1_A 151 QTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVD 229 (553)
T ss_dssp EECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEEC
T ss_pred CCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEec
Confidence 9987 45 899999999986 689999999999999985 65 654 488899998 999999999
Q ss_pred cccCCCccccCcCCceeEecceeEEEecc-------------cCCCHHH-----------HHHHHHHHHHcCCCEEEEec
Q 011103 226 RGFLSPYFVTDRQKRTVEFHDGKLLLVDK-------------KIKNPKD-----------MFKILDSAVKEKYPIVIVAE 281 (493)
Q Consensus 226 ~~~~~p~~~~~~~~~~~~~~n~~Ill~d~-------------~i~~~~e-----------l~~~le~i~~~g~~lvii~~ 281 (493)
++|.|||| +++++||||+++|+ .|+++++ +.++++++.+.|+||||+++
T Consensus 230 k~~~~~~m-------~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~ 302 (553)
T 3ko1_A 230 KEVVHPGM-------PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQK 302 (553)
T ss_dssp SCBSCTTS-------CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSS
T ss_pred ccccCCCC-------ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEecc
Confidence 99999985 55799999999998 4678877 45567899999999999999
Q ss_pred CchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe---cCe
Q 011103 282 DIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDS 358 (493)
Q Consensus 282 ~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~ 358 (493)
+|+++++++|..+ +|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|++. +++
T Consensus 303 ~I~~~al~~L~~~------gI~~v~-----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~ 366 (553)
T 3ko1_A 303 GIDEVAQSYLAKK------GVLAVR-----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDK 366 (553)
T ss_dssp CBCSHHHHHHHHH------TCEEEC-----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSC
T ss_pred ChHHHHHHHHHhc------chhhhh-----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcce
Confidence 9999999999754 367776 66899999999999999999 5899999999999999975 889
Q ss_pred EEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhc
Q 011103 359 TLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEE 438 (493)
Q Consensus 359 ~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~ 438 (493)
|+||+||+++ ..+||+|||+|+.+++|+||+++||||++|+++++
T Consensus 367 ~~~i~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~ 411 (553)
T 3ko1_A 367 MVFVEGAKNP-----------------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKD 411 (553)
T ss_dssp CEEEESCSSS-----------------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCCC-----------------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999765 36789999999999999999999999999999999
Q ss_pred C-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 439 G-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 439 g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+++
T Consensus 412 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 466 (553)
T 3ko1_A 412 GRAIAGGGAVEIEIAKKLRKYAPQVGGKEQ-LAVEAYANALESLVSILIENAGFDP 466 (553)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHHHCSHHH-HHHHHHHHHHHHHHHHHHHHHTSCH
T ss_pred CceecCCceeEeHHHHHHHHhccccCChhH-hHHHHHHHHHHhHHHHHHHhcCCCH
Confidence 9 9999999999999999999988888888 5899999999999999999999984
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=9.6e-88 Score=725.02 Aligned_cols=410 Identities=23% Similarity=0.382 Sum_probs=372.7
Q ss_pred CCC-CCcceEEeecCCCCCCCCCCCCccccccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEE
Q 011103 1 MAA-LSTPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKI 79 (493)
Q Consensus 1 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~i 79 (493)
|+. |.+|+++++++ +++.|| +++|..|+.||..|+++|+|||||+||||||+++.|+++|
T Consensus 1 m~~~~~~~~~~l~~~-----------------~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~i 61 (548)
T 1q3q_A 1 MAQLSGQPVVILPEG-----------------TQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVV 61 (548)
T ss_dssp --------CCCSCTT-----------------CEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEE
T ss_pred CCCcCCCCcccccCC-----------------cceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEE
Confidence 554 44676666665 345668 8999999999999999999999999999999999999999
Q ss_pred ecChHHHhccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 011103 80 VNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLS 159 (493)
Q Consensus 80 TnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~ 159 (493)
||||+||||+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.+++
T Consensus 62 TnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~ 137 (548)
T 1q3q_A 62 TNDCATILDKIDLQHPA----AKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQE 137 (548)
T ss_dssp ESCHHHHHHHSCCCSHH----HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHhhccchH----HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcccCh--H-HHHHHHHHhcCC------chhHhHHHHHHHHhhccC--C-------ceEee--cCCCcccceeee
Q 011103 160 ELKLTSREVED--H-ELADVAAVSAGN------DYTVGKMISDALQQVGRN--G-------VVTIE--KGKCTENSLEIV 219 (493)
Q Consensus 160 ~L~~~s~~v~~--~-~L~~va~ts~~~------~~~l~~li~~Ai~~v~~~--g-------~I~v~--~G~~~~ds~~~i 219 (493)
+|+++++|++. . .|.++|+|++++ ++.|+++++||+.+++++ | .|+++ +|++++|| +++
T Consensus 138 ~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv 216 (548)
T 1q3q_A 138 ILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELV 216 (548)
T ss_dssp HHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEE
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEE
Confidence 99999999874 4 899999988653 689999999999999876 4 56654 99999999 999
Q ss_pred eceEEecccCCCccccCcCCceeEecceeEEEeccc-------------CCCHHHH-----------HHHHHHHHHcCCC
Q 011103 220 EGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------FKILDSAVKEKYP 275 (493)
Q Consensus 220 ~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~el-----------~~~le~i~~~g~~ 275 (493)
+|++|+++|.|||| +++++||||+++|++ |++++++ .++++++.+.|+|
T Consensus 217 ~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 289 (548)
T 1q3q_A 217 RGVVIDKEVVHPRM-------PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGAN 289 (548)
T ss_dssp SSEEESCCCSSTTS-------CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eeEEEeccCCCCCC-------cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 99999999999986 357999999999998 7888886 6788999999999
Q ss_pred EEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe
Q 011103 276 IVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT 355 (493)
Q Consensus 276 lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~ 355 (493)
|||++++|+++++++|..|+ |+||+ ++++++|+|||++|||++++ +++++++++||+|+.|++.
T Consensus 290 lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~ 353 (548)
T 1q3q_A 290 VVFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEER 353 (548)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEE
T ss_pred EEEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEE
Confidence 99999999999999998874 68875 78899999999999999999 5899999999999999975
Q ss_pred ---cCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHH
Q 011103 356 ---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNAT 432 (493)
Q Consensus 356 ---~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~ 432 (493)
+++|+||+||+++ +++||+|||+|+.+++|+||+++||||++
T Consensus 354 ~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~ 398 (548)
T 1q3q_A 354 KLAGENMIFVEGCKNP-----------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVV 398 (548)
T ss_dssp EETTEEEEEEECCSSC-----------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EecCceEEEEecCCCC-----------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHH
Confidence 8899999998753 58899999999999999999999999999
Q ss_pred HHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 433 KAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 433 ~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+++
T Consensus 399 r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 459 (548)
T 1q3q_A 399 KDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEA-LAIENFADALKIIPKTLAENAGLDT 459 (548)
T ss_dssp HHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHTTHHHHHHHHHTTCCH
T ss_pred HHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999 9999999999999999999887777777 5899999999999999999999974
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.1e-87 Score=723.90 Aligned_cols=392 Identities=24% Similarity=0.377 Sum_probs=362.8
Q ss_pred cCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhccccc
Q 011103 36 FNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLA 115 (493)
Q Consensus 36 ~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~ 115 (493)
+| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++
T Consensus 16 ~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~ 89 (543)
T 3ruv_A 16 MG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQEKEV 89 (543)
T ss_dssp ET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHHHHHT
T ss_pred cc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHhhh
Confidence 36 789999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC--hH-HHHHHHHHhcCC------chh
Q 011103 116 GDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGN------DYT 186 (493)
Q Consensus 116 GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~-~L~~va~ts~~~------~~~ 186 (493)
||||||+||||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. .|.++|+||+++ ++.
T Consensus 90 GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~ 169 (543)
T 3ruv_A 90 GDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEK 169 (543)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHH
Confidence 999999999999999999999999999999999999999999999999999987 45 899999999874 789
Q ss_pred HhHHHHHHHHhhccC-Cc-----eEe--ecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEeccc---
Q 011103 187 VGKMISDALQQVGRN-GV-----VTI--EKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK--- 255 (493)
Q Consensus 187 l~~li~~Ai~~v~~~-g~-----I~v--~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~--- 255 (493)
|+++++||+.+++++ |. |++ .+|+++.|+ ++++|++|+++|.|||| +++++||||+++|++
T Consensus 170 i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~~~Le~ 241 (543)
T 3ruv_A 170 LAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQM-------PKKVTDAKIALLNCAIEI 241 (543)
T ss_dssp HHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTTS-------CSEEEEEEEEEESSCBSC
T ss_pred HHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCccc-------cccccCcEEEEEcccccc
Confidence 999999999999987 64 554 489999998 99999999999999985 568999999999984
Q ss_pred ----------CCCHHH-----------HHHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccc
Q 011103 256 ----------IKNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERK 314 (493)
Q Consensus 256 ----------i~~~~e-----------l~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~ 314 (493)
|+++++ +.++++++.+.|+||||++++|+++++++|..+ +|++|+ +++
T Consensus 242 ~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~-----~v~ 310 (543)
T 3ruv_A 242 KETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR-----RVK 310 (543)
T ss_dssp CCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC-----SCC
T ss_pred cccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe-----eCC
Confidence 566666 556788999999999999999999999999754 367776 668
Q ss_pred cchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe---cCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHH
Q 011103 315 SHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQK 391 (493)
Q Consensus 315 ~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~ 391 (493)
+.+|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|+++.
T Consensus 311 k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~---------------------- 363 (543)
T 3ruv_A 311 KSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPK---------------------- 363 (543)
T ss_dssp HHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCS----------------------
T ss_pred HHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCc----------------------
Confidence 99999999999999999 5899999999999999975 88999999997653
Q ss_pred HHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHH
Q 011103 392 NILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIG 470 (493)
Q Consensus 392 ~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~ 470 (493)
.+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.+| ++
T Consensus 364 -------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~ 429 (543)
T 3ruv_A 364 -------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQ-LA 429 (543)
T ss_dssp -------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHH-HH
T ss_pred -------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHH-HH
Confidence 57899999999999999999999999999999999 9999999999999999999988888887 58
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC
Q 011103 471 AEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 471 ~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
+++|++||+.||++||+|||+++
T Consensus 430 i~~~a~ALe~ip~~La~NaG~d~ 452 (543)
T 3ruv_A 430 VRAFADALEVIPRTLAENAGLDA 452 (543)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999984
No 9
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=5.6e-87 Score=718.86 Aligned_cols=406 Identities=24% Similarity=0.374 Sum_probs=364.3
Q ss_pred CcceEEeecCCCCCCCCCCCCccccccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChH
Q 011103 5 STPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGE 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~ 84 (493)
++|++++++++++. || +++|..|+.||..|+++|+|||||+||||||+++.|+++|||||+
T Consensus 4 ~~~~~~l~~~~~~~-----------------~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~ 64 (543)
T 1a6d_B 4 GQPIFILKEGTKRE-----------------SG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGV 64 (543)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHH
T ss_pred CcchhhcCCcchhh-----------------hh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHH
Confidence 36777777775544 46 789999999999999999999999999999999999999999999
Q ss_pred HHhccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhc
Q 011103 85 TVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLT 164 (493)
Q Consensus 85 tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~ 164 (493)
||||+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++
T Consensus 65 tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~ 140 (543)
T 1a6d_B 65 TILKEMDVEHPA----AKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEI 140 (543)
T ss_dssp HHHHHSCCCSHH----HHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccchH----HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCh--H-HHHHHHHHhcC------CchhHhHHHHHHHHhhccC--Cc-------eEee--cCCCcccceeeeeceEE
Q 011103 165 SREVED--H-ELADVAAVSAG------NDYTVGKMISDALQQVGRN--GV-------VTIE--KGKCTENSLEIVEGMRF 224 (493)
Q Consensus 165 s~~v~~--~-~L~~va~ts~~------~~~~l~~li~~Ai~~v~~~--g~-------I~v~--~G~~~~ds~~~i~G~~~ 224 (493)
++|++. . .|.++|+|+++ +++.|+++++||+.+++++ |. |+++ +|++++|| ++++|++|
T Consensus 141 a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~ 219 (543)
T 1a6d_B 141 STKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIV 219 (543)
T ss_dssp CEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEE
T ss_pred cCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEE
Confidence 999874 4 89999998865 3689999999999999876 53 6554 99999999 99999999
Q ss_pred ecccCCCccccCcCCceeEecceeEEEeccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEe
Q 011103 225 DRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVA 280 (493)
Q Consensus 225 ~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~el-----------~~~le~i~~~g~~lvii~ 280 (493)
+++|.|||| +++++||||+++|++ |++++++ .++++++.+.|+||||++
T Consensus 220 dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~ 292 (543)
T 1a6d_B 220 DKEKVHPGM-------PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQ 292 (543)
T ss_dssp SCCCSSTTS-------CSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEES
T ss_pred ecCCCCCCC-------cceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 999999986 457999999999998 7787775 778899999999999999
Q ss_pred cCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe---cC
Q 011103 281 EDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KD 357 (493)
Q Consensus 281 ~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~ 357 (493)
++|+++++++|..|+ |+||+ ++++++|+|||++|||++++ +++++++++||+|+.|++. ++
T Consensus 293 ~~I~~~al~~L~~~~------I~av~-----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~ 356 (543)
T 1a6d_B 293 KGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGED 356 (543)
T ss_dssp SCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTE
T ss_pred CCcCHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCc
Confidence 999999999998874 68875 78899999999999999999 5899999999999999974 88
Q ss_pred eEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHh
Q 011103 358 STLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIE 437 (493)
Q Consensus 358 ~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~ 437 (493)
+|+||+||+++ +++||+|||+|+.+++|+||+++||||++|++++
T Consensus 357 ~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 357 YMTFVTGCKNP-----------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp EEEEEEEESSS-----------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCC-----------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998753 5889999999999999999999999999999999
Q ss_pred cC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 438 EG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 438 ~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
+| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+++
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 457 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQ-LAIEKFADAIEEIPRALAENAGLDP 457 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHH-HHHHHHHHHHTHHHHHHHHHHTCCH
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHH-HHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 99 9999999999999999999988888777 5899999999999999999999974
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=3.6e-87 Score=720.10 Aligned_cols=403 Identities=21% Similarity=0.359 Sum_probs=365.6
Q ss_pred ceEEeecCCCCCCCCCCCCccccccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHH
Q 011103 7 PIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETV 86 (493)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tI 86 (493)
|++++++++++ .|| +++|..|+.||..|+++|+|||||+||||||+++.|+++|||||+||
T Consensus 7 ~~~~l~~~~~~-----------------~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tI 67 (545)
T 1a6d_A 7 PILVLKEGTQR-----------------EQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATI 67 (545)
T ss_dssp ----------C-----------------EEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHH
T ss_pred cccccCCcchh-----------------hch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHH
Confidence 77777776544 457 89999999999999999999999999999999999999999999999
Q ss_pred hccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCc
Q 011103 87 LKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSR 166 (493)
Q Consensus 87 l~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~ 166 (493)
||+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++
T Consensus 68 lk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~ 143 (545)
T 1a6d_A 68 LKEMDVEHPT----AKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAE 143 (545)
T ss_dssp HHHSCCCSHH----HHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHhhhccchH----HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-hH-HHHHHHHHhcC------CchhHhHHHHHHHHhhccC---------CceEee--cCCCcccceeeeeceEEecc
Q 011103 167 EVE-DH-ELADVAAVSAG------NDYTVGKMISDALQQVGRN---------GVVTIE--KGKCTENSLEIVEGMRFDRG 227 (493)
Q Consensus 167 ~v~-~~-~L~~va~ts~~------~~~~l~~li~~Ai~~v~~~---------g~I~v~--~G~~~~ds~~~i~G~~~~~~ 227 (493)
| + +. .|.++|+||++ +++.|+++++||+.+++++ +.|+++ +|++++|| ++++|++|+++
T Consensus 144 ~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~ 221 (545)
T 1a6d_A 144 K-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKE 221 (545)
T ss_dssp E-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCC
T ss_pred C-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEecc
Confidence 8 6 55 89999998865 4689999999999999875 256665 99999999 99999999999
Q ss_pred cCCCccccCcCCceeEecceeEEEeccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCc
Q 011103 228 FLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDI 283 (493)
Q Consensus 228 ~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~el-----------~~~le~i~~~g~~lvii~~~i 283 (493)
|.|||| +++++||||+++|++ |++++++ .++++++.+.|+||||++++|
T Consensus 222 ~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I 294 (545)
T 1a6d_A 222 KVHSKM-------PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGI 294 (545)
T ss_dssp CSCTTS-------CSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCB
T ss_pred CCCCCC-------cceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCc
Confidence 999986 457899999999998 7777775 778899999999999999999
Q ss_pred hHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe---cCeEE
Q 011103 284 EQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTL 360 (493)
Q Consensus 284 ~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~ 360 (493)
+++++++|..|+ |+||+ ++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+
T Consensus 295 ~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~ 358 (545)
T 1a6d_A 295 DDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMT 358 (545)
T ss_dssp CHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEE
T ss_pred cHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEE
Confidence 999999999884 68875 78899999999999999999 5899999999999999975 78999
Q ss_pred EEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-
Q 011103 361 IVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG- 439 (493)
Q Consensus 361 ~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g- 439 (493)
||+||+++ +++||+|||+|+.+++|+||+++||||++|+++++|
T Consensus 359 ~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~ 403 (545)
T 1a6d_A 359 FVMGCKNP-----------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGK 403 (545)
T ss_dssp EEEEESCS-----------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred EEecCCCC-----------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998753 588999999999999999999999999999999999
Q ss_pred ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 440 IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 440 vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
+|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+++
T Consensus 404 iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 456 (545)
T 1a6d_A 404 FLWGGGAVEAELAMRLAKYANSVGGREQ-LAIEAFAKALEIIPRTLAENAGIDP 456 (545)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTSCHHHH-HHHHHHHHHHTHHHHHHHHHHTSCH
T ss_pred EEeCcCHHHHHHHHHHHHHhhccCccHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999988878777 5899999999999999999999974
No 11
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3e-86 Score=708.57 Aligned_cols=393 Identities=20% Similarity=0.309 Sum_probs=360.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCCc
Q 011103 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (493)
Q Consensus 40 ~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGT 119 (493)
.+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC--h----H-HHHHHHHHhcC------Cchh
Q 011103 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--D----H-ELADVAAVSAG------NDYT 186 (493)
Q Consensus 120 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~----~-~L~~va~ts~~------~~~~ 186 (493)
||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ + . .|.++|+||++ +++.
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999884 4 3 67999999875 4689
Q ss_pred HhHHHHHHHHhhccC---CceEe--ecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEeccc------
Q 011103 187 VGKMISDALQQVGRN---GVVTI--EKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK------ 255 (493)
Q Consensus 187 l~~li~~Ai~~v~~~---g~I~v--~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~------ 255 (493)
|+++++||+.+++.+ +.|.+ .+|+++.|| ++++||+|+++|.||||.++|+ +++||||+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccCCc----cccccEEEEEccccccccc
Confidence 999999999999876 66654 478899999 9999999999999999976543 8999999999984
Q ss_pred -------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccch
Q 011103 256 -------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHY 317 (493)
Q Consensus 256 -------i~~~~el-----------~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~ 317 (493)
|++++++ .++++++.+.|+||||++++|++.++++|..+ +|+++ +++++.+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~------gI~~v-----~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR------DMFCA-----GRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc------CCccc-----ccccHHH
Confidence 6777776 55688999999999999999999888887433 35555 4788999
Q ss_pred HHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe---cCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHH
Q 011103 318 LDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNIL 394 (493)
Q Consensus 318 l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l 394 (493)
|+|||++|||++++ +++++++++||+|+.|++. +++|+||+||+++
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------- 358 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------------- 358 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------------
Confidence 99999999999999 5899999999999999975 7899999999754
Q ss_pred HHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHH
Q 011103 395 NERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEI 473 (493)
Q Consensus 395 ~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~ 473 (493)
..+||+|||+|+.+++|+||+++||||++|++++++ +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 359 ---------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 428 (515)
T 3iyg_H 359 ---------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGA 428 (515)
T ss_pred ---------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHH
Confidence 378999999999999999999999999999999985 9999999999999999999888888888 58999
Q ss_pred HHHHHHHHHHHHHHhcCCCC
Q 011103 474 FKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 474 ~a~AL~~i~~~L~~NaG~~~ 493 (493)
|++||+.||++||+|||+++
T Consensus 429 ~a~ALe~ip~~La~NaG~d~ 448 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDA 448 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCH
Confidence 99999999999999999984
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=4.2e-87 Score=720.98 Aligned_cols=402 Identities=21% Similarity=0.318 Sum_probs=370.9
Q ss_pred cceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 011103 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (493)
Q Consensus 31 ~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~ 110 (493)
+|++.|| +++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+|||++|+++||+ |+|++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 7899999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-cCcccCh--H-HHHHHHHHhcCC---
Q 011103 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKL-TSREVED--H-ELADVAAVSAGN--- 183 (493)
Q Consensus 111 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~-~s~~v~~--~-~L~~va~ts~~~--- 183 (493)
||+++||||||+||||++||+++.+++++|+||+.|++||++|.+.++++|++ +++|++. . .|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999874 3 899999999986
Q ss_pred ---chhHhHHHHHHHHhhcc-----CCc-----e--EeecCCCcccceeeeeceEEecccCCCccccCcCCceeEec--c
Q 011103 184 ---DYTVGKMISDALQQVGR-----NGV-----V--TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFH--D 246 (493)
Q Consensus 184 ---~~~l~~li~~Ai~~v~~-----~g~-----I--~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~--n 246 (493)
+++|+++++||+.++++ ++. | .+.+|++++|| ++++||+|+++|.|||| +++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m-------~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM-------PKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS-------CSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCCc-------ceeeccCC
Confidence 79999999999999984 243 2 33569999998 99999999999999975 45788 9
Q ss_pred eeEEEecccC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhcccccee
Q 011103 247 GKLLLVDKKI-------------KNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKA 302 (493)
Q Consensus 247 ~~Ill~d~~i-------------~~~~e-----------l~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i 302 (493)
|||+++|+++ +++++ +.++++++.+.|+||||++++|+++++++|+.|+ |
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------I 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------C
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------C
Confidence 9999999976 45544 5778999999999999999999999999999985 5
Q ss_pred eeeecCcccccccchHHHHHHHhCCeeeecccCccc-cCCCCCcccceeEEE---EecCeEEEEecCCChhhHHHHHHHH
Q 011103 303 AAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTL-DKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEI 378 (493)
Q Consensus 303 ~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~-~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~~~~~l 378 (493)
+||+ ++++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|+||+||++
T Consensus 316 ~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------- 379 (559)
T 3p9d_A 316 MGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK----------- 379 (559)
T ss_dssp EEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------
T ss_pred ceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------
Confidence 7775 778999999999999999998665554 789999999999999 47899999999875
Q ss_pred HHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHh
Q 011103 379 RSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEG 457 (493)
Q Consensus 379 ~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~ 457 (493)
++++||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++|+.+|++
T Consensus 380 ------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 380 ------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp ------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred ------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999 999999999999999999
Q ss_pred HhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 458 IKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 458 ~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
++.+.++.+| +++++|++||+.||++||+|||+++
T Consensus 436 ~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 470 (559)
T 3p9d_A 436 FATTVGSREQ-LAIAEFAAALLIIPKTLAVNAAKDS 470 (559)
T ss_dssp HHTTSCTTHH-HHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred HhcccChHHH-HHHHHHHHHHHHHHHHHHHHCCCCH
Confidence 9988888787 5899999999999999999999985
No 13
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.1e-85 Score=704.42 Aligned_cols=394 Identities=22% Similarity=0.323 Sum_probs=363.1
Q ss_pred eeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 011103 33 EVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKY--GPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (493)
Q Consensus 33 ~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~--g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~ 110 (493)
+-.|| .++|..|+.||+.|+++|++||||+||||||+++. |+|+|||||+||||+|+++||. |+|++++|++
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~~ 77 (513)
T 3iyg_B 4 DEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSRV 77 (513)
T ss_pred chhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHHH
Confidence 34578 89999999999999999999999999999999999 9999999999999999999997 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC-----hH-HHHHHHHHhcC--
Q 011103 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE-----DH-ELADVAAVSAG-- 182 (493)
Q Consensus 111 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~-----~~-~L~~va~ts~~-- 182 (493)
||+++||||||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. .|.++|+||++
T Consensus 78 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK 157 (513)
T 3iyg_B 78 QDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSK 157 (513)
T ss_pred hhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999986 34 89999998875
Q ss_pred ----CchhHhHHHHHHHHhhccC---CceEe--ecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEec
Q 011103 183 ----NDYTVGKMISDALQQVGRN---GVVTI--EKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVD 253 (493)
Q Consensus 183 ----~~~~l~~li~~Ai~~v~~~---g~I~v--~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 253 (493)
+++.|+++++||+.+++++ +.|.+ .+|+++.|| ++++||+|+++|.+| |+++++||||+++|
T Consensus 158 ~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~ 228 (513)
T 3iyg_B 158 LLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIAN 228 (513)
T ss_pred ccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEc
Confidence 4689999999999999987 66655 479999999 999999999999876 56789999999999
Q ss_pred c--------------cCCCHHHHHH-----------HHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecC
Q 011103 254 K--------------KIKNPKDMFK-----------ILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAP 308 (493)
Q Consensus 254 ~--------------~i~~~~el~~-----------~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~ 308 (493)
+ .|++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||++|
T Consensus 229 ~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~ 302 (513)
T 3iyg_B 229 TGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHA 302 (513)
T ss_pred CCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEecC
Confidence 8 3667777654 688899999999999999999999999765 58999988
Q ss_pred cccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEE---EecCeEEEEecCCChhhHHHHHHHHHHHHhhh
Q 011103 309 AFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEIRSLAEIT 385 (493)
Q Consensus 309 ~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~ 385 (493)
++ .+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.||++
T Consensus 303 ~~-----~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 354 (513)
T 3iyg_B 303 DF-----VGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL------------------ 354 (513)
T ss_pred CH-----HHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC------------------
Confidence 64 5899999999999999 58999999999999998 57889999999864
Q ss_pred hHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhc-CccccCchhhhHHHHHHHhHhhhcCc
Q 011103 386 EERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEE-GIVVGGGCSLLRLSAKVEGIKELLDN 464 (493)
Q Consensus 386 ~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~-gvvpGGG~~e~~ls~~L~~~~~~~~~ 464 (493)
++++||+|||+|+.+++|+||+++||||++|+++++ ++|||||++|++++.+|++++.+.++
T Consensus 355 -----------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g 417 (513)
T 3iyg_B 355 -----------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPG 417 (513)
T ss_pred -----------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCc
Confidence 358899999999999999999999999999999999 59999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 465 EEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 465 ~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
.+| +++++|++||+.||++||+|||+++
T Consensus 418 ~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 445 (513)
T 3iyg_B 418 KEA-VAMESYAKALRMLPTIIADNAGYDS 445 (513)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 777 5899999999999999999999984
No 14
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.3e-87 Score=721.80 Aligned_cols=409 Identities=20% Similarity=0.269 Sum_probs=362.6
Q ss_pred CCcceEEeecCCCCCCCCCCCCccccccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecCh
Q 011103 4 LSTPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDG 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG 83 (493)
|.+|+++|+++++|.+ | .++|..|+.||..|+++|++||||+||||||++++|+|+|||||
T Consensus 6 ~~~~~~~l~~~~~~~~-----------------g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG 66 (550)
T 3p9d_G 6 QTPTIVVLKEGTDASQ-----------------G--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDG 66 (550)
T ss_dssp ----------CCCEEE-----------------S--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCH
T ss_pred CCcchhhhcCCcchhh-----------------h--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCH
Confidence 6689999999987765 6 78999999999999999999999999999999999999999999
Q ss_pred HHHhccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh
Q 011103 84 ETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKL 163 (493)
Q Consensus 84 ~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~ 163 (493)
+||||+|+++||+ |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|.+.++++|++
T Consensus 67 ~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~ 142 (550)
T 3p9d_G 67 ATILKLLDVVHPA----AKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINE 142 (550)
T ss_dssp HHHTTTSCCCSHH----HHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHH----HHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccC--h---H-HHHHHHHHhcC------CchhHhHHHHHHHHhhcc-C------CceEeecCCCcccceeeeeceEE
Q 011103 164 TSREVE--D---H-ELADVAAVSAG------NDYTVGKMISDALQQVGR-N------GVVTIEKGKCTENSLEIVEGMRF 224 (493)
Q Consensus 164 ~s~~v~--~---~-~L~~va~ts~~------~~~~l~~li~~Ai~~v~~-~------g~I~v~~G~~~~ds~~~i~G~~~ 224 (493)
++++++ + . .|.++|+||++ +++.|+++++||+.++++ + +++++ +|++++|| ++++|++|
T Consensus 143 ~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~ 220 (550)
T 3p9d_G 143 LAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAF 220 (550)
T ss_dssp SEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEE
T ss_pred hcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEE
Confidence 998875 3 4 79999999875 378999999999999985 3 44554 69999999 99999999
Q ss_pred ecccCCCccccCcCCceeEecceeEEEeccc-------------CCCHHHHHH-----------HHHHHHHcCCCEEEEe
Q 011103 225 DRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDMFK-----------ILDSAVKEKYPIVIVA 280 (493)
Q Consensus 225 ~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~el~~-----------~le~i~~~g~~lvii~ 280 (493)
+++|.||||.+.+ ..++||+|+++|++ |++++++.+ +++++.+.|++|||++
T Consensus 221 dk~~~s~yf~~~~----~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~ 296 (550)
T 3p9d_G 221 KKTFSYAGFEQQP----KKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSK 296 (550)
T ss_dssp CCCSSCTTCSCSC----SCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEES
T ss_pred eccccccccccCc----ccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 9999999997544 46999999999997 566666654 6778899999999999
Q ss_pred cCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEE---ecC
Q 011103 281 EDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI---TKD 357 (493)
Q Consensus 281 ~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~ 357 (493)
++|++.++++|..+ +|++++ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++
T Consensus 297 ~~I~dla~~~L~~~------gI~~v~-----~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e 360 (550)
T 3p9d_G 297 LPIGDLATQFFADR------NIFCAG-----RVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSE 360 (550)
T ss_dssp SCCCHHHHHTTGGG------TCEEEE-----CCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSS
T ss_pred CCccHHHHHHHHHc------CCcccc-----CcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCe
Confidence 99999998887432 356554 77899999999999999999 589999999999999987 578
Q ss_pred eEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHh
Q 011103 358 STLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIE 437 (493)
Q Consensus 358 ~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~ 437 (493)
++++|.||+++ +++||+|||+|+.+++|+||+++||||++|++++
T Consensus 361 ~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~ 405 (550)
T 3p9d_G 361 RYNLFQGCPQA-----------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQ 405 (550)
T ss_dssp CCEEEBCCTTC-----------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCC-----------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999998653 4778999999999999999999999999999999
Q ss_pred cC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 438 EG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 438 ~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
+| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+++
T Consensus 406 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 461 (550)
T 3p9d_G 406 NKLIVAGGGATEMEVSKCLRDYSKTIAGKQQ-MIINAFAKALEVIPRQLCENAGFDA 461 (550)
T ss_dssp SCCEEETTTHHHHHHHHHHHHHHHTCCSTTH-HHHHHHHHHHTHHHHHHHHTSCSCH
T ss_pred cCCcccCCCHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 99 9999999999999999999888888887 5899999999999999999999984
No 15
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.1e-86 Score=713.94 Aligned_cols=401 Identities=19% Similarity=0.290 Sum_probs=367.0
Q ss_pred cceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhh
Q 011103 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (493)
Q Consensus 31 ~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~ 110 (493)
.|+..|| +++|..|+.||..|+++|++||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 5778889 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC--hH-HHHHHHHHhcCC----
Q 011103 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGN---- 183 (493)
Q Consensus 111 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~-~L~~va~ts~~~---- 183 (493)
||+++||||||+||||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. .|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 55 899999999975
Q ss_pred --chhHhHHHHHHHHhhcc--CCce-------EeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEe
Q 011103 184 --DYTVGKMISDALQQVGR--NGVV-------TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (493)
Q Consensus 184 --~~~l~~li~~Ai~~v~~--~g~I-------~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~ 252 (493)
++.|+++++||+.++++ +|.| .+.+|++++|| ++++|++|+++|.|||| |+++++||||+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 68999999999999987 4433 23469999998 99999999999999985 6778999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHHcCCCEEEEecCc-----hHHHHHHHHHhhccccceee
Q 011103 253 DKKIK-------------NPKD-----------MFKILDSAVKEKYPIVIVAEDI-----EQQALALLIRNKLRGVLKAA 303 (493)
Q Consensus 253 d~~i~-------------~~~e-----------l~~~le~i~~~g~~lvii~~~i-----~~~al~~L~~n~~~g~~~i~ 303 (493)
+++++ ++++ +.++++++.+.|+||||++++| +++++++|..| +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99765 4543 6778999999999999999999 99999999766 478
Q ss_pred eeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEE---ecCeEEEEecCCChhhHHHHHHHHHH
Q 011103 304 AIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI---TKDSTLIVTDGSTRAAVEKRISEIRS 380 (493)
Q Consensus 304 aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~g~~~~~~i~~~~~~l~~ 380 (493)
||+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|....
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------- 370 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------- 370 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------
Confidence 887 56789999999999999999 478999999999999985 467889999875210
Q ss_pred HHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHh
Q 011103 381 LAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIK 459 (493)
Q Consensus 381 ~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~ 459 (493)
.++++||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++
T Consensus 371 ---------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 429 (528)
T 3p9d_D 371 ---------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA 429 (528)
T ss_dssp ---------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCC
T ss_pred ---------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHh
Confidence 15688999999999999999999999999999999999 99999999999999999998
Q ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 460 ELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 460 ~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
.+.++.+| +|+++|++||+.||++||+|||+++
T Consensus 430 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 462 (528)
T 3p9d_D 430 RSMEGVQA-FIWQEFASALEVIPTTLAENAGLNS 462 (528)
T ss_dssp TTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCH
T ss_pred hccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 77878777 5899999999999999999999984
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-85 Score=704.09 Aligned_cols=399 Identities=21% Similarity=0.301 Sum_probs=362.6
Q ss_pred eccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhccc
Q 011103 34 VYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTND 113 (493)
Q Consensus 34 i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~ 113 (493)
-.|| .++|..|+.||..|+++|+|||||+||||||+++.|+++|||||+|||++|+++||+ |+|++++|++||+
T Consensus 5 ~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 78 (529)
T 3iyg_A 5 RSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQDK 78 (529)
T ss_pred hhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhhh
Confidence 3567 899999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-cCcccC--hH-HHHHHHHHhcC------C
Q 011103 114 LAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKL-TSREVE--DH-ELADVAAVSAG------N 183 (493)
Q Consensus 114 ~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~-~s~~v~--~~-~L~~va~ts~~------~ 183 (493)
++||||||+|+||++||+++.+++++|+||+.|++||++|.+.++++|++ ++++++ +. .|.++|+||++ +
T Consensus 79 e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 79 EVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999999999999999998 899887 44 89999999986 4
Q ss_pred chhHhHHHHHHHHhhc---cCC-----c--e--EeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEE
Q 011103 184 DYTVGKMISDALQQVG---RNG-----V--V--TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (493)
Q Consensus 184 ~~~l~~li~~Ai~~v~---~~g-----~--I--~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 251 (493)
++.|+++++||+.+++ ++| . | .+.+|+++.|| ++++|++|+++|.||+| ++.++||||++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 230 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQGM-------PKRIVNAKIAC 230 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCcccccC-------CcccCCceEEE
Confidence 6899999999999997 344 2 4 34689999999 99999999999999975 45789999999
Q ss_pred ecccC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeec
Q 011103 252 VDKKI-------------KNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKA 307 (493)
Q Consensus 252 ~d~~i-------------~~~~e-----------l~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~ 307 (493)
+++++ +++++ +.++++++.+.|+||||++++|+++++++|..|+ |+||+
T Consensus 231 l~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~- 303 (529)
T 3iyg_A 231 LDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR- 303 (529)
T ss_pred ecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-
Confidence 99864 44433 4567889999999999999999999999998884 78887
Q ss_pred CcccccccchHHHHHHHhCCeeeecccCcc-ccCCCCCcccceeEEE---EecCeEEEEecCCChhhHHHHHHHHHHHHh
Q 011103 308 PAFGERKSHYLDDIAILTGGLVIRDEMGLT-LDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEIRSLAE 383 (493)
Q Consensus 308 ~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~-~~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~ 383 (493)
++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++|+||+||+++
T Consensus 304 ----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 364 (529)
T 3iyg_A 304 ----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR--------------- 364 (529)
T ss_pred ----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC---------------
Confidence 67899999999999999999754443 2446678999999998 678999999998754
Q ss_pred hhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhc
Q 011103 384 ITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELL 462 (493)
Q Consensus 384 ~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~ 462 (493)
..+||+|||+|+.+++|.||+++||||++|+++++| +|||||++|+++|.+|++++.++
T Consensus 365 --------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~ 424 (529)
T 3iyg_A 365 --------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSM 424 (529)
T ss_pred --------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhc
Confidence 478999999999999999999999999999999999 99999999999999999999888
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 463 DNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 463 ~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
++.+| +++++|++||+.||++||+|||+|+
T Consensus 425 ~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~ 454 (529)
T 3iyg_A 425 GSREQ-LAIAEFARSLLVIPNTLAVNAAQDS 454 (529)
T ss_pred CChHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 89888 5899999999999999999999985
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-84 Score=696.76 Aligned_cols=395 Identities=22% Similarity=0.339 Sum_probs=360.1
Q ss_pred eeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcc
Q 011103 33 EVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTN 112 (493)
Q Consensus 33 ~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d 112 (493)
.-.|| .++|..|+.||..|+++|++||||+||||||+++.|+|+|||||+|||++|+++||+ |+|++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~qd 77 (515)
T 3iyg_E 4 SRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQD 77 (515)
T ss_pred hhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 34578 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCh----H-HHHHHHHHhcCC----
Q 011103 113 DLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED----H-ELADVAAVSAGN---- 183 (493)
Q Consensus 113 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~----~-~L~~va~ts~~~---- 183 (493)
+++||||||+|+||++||+++.+++.+|+||+.|++||++|.+.++++|+++++|++. . .|.++|+||+++
T Consensus 78 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~ 157 (515)
T 3iyg_E 78 DEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVN 157 (515)
T ss_pred hhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchh
Confidence 9999999999999999999999999999999999999999999999999999988753 3 899999999986
Q ss_pred --chhHhHHHHHHHHhhccC-------Cce--EeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEe
Q 011103 184 --DYTVGKMISDALQQVGRN-------GVV--TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (493)
Q Consensus 184 --~~~l~~li~~Ai~~v~~~-------g~I--~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~ 252 (493)
.+.|+++++||+..+.+. +.| .+.+|+++.|| ++++||+|+++|.||||. ..++||+|+++
T Consensus 158 ~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m~-------~~~~~~kIall 229 (515)
T 3iyg_E 158 SCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQMP-------KQVEDAKIAIL 229 (515)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEeccccccccc-------ccCCCceEEEE
Confidence 478999999999998652 223 44689999999 999999999999999864 35678888888
Q ss_pred ccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecC
Q 011103 253 DKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAP 308 (493)
Q Consensus 253 d~~-------------i~~~~el-----------~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~ 308 (493)
+++ |++++++ .++++++.+.|+||||++++|+++++++|+.|+ |.+++
T Consensus 230 ~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~-- 301 (515)
T 3iyg_E 230 TCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVR-- 301 (515)
T ss_pred cCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEe--
Confidence 764 5667775 567899999999999999999999999999885 46676
Q ss_pred cccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEE-----ecCeEEEEecCCChhhHHHHHHHHHHHHh
Q 011103 309 AFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI-----TKDSTLIVTDGSTRAAVEKRISEIRSLAE 383 (493)
Q Consensus 309 ~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~~~g~~~~~~i~~~~~~l~~~~~ 383 (493)
++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|+||+||+++
T Consensus 302 ---~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~--------------- 358 (515)
T 3iyg_E 302 ---WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS--------------- 358 (515)
T ss_pred ---ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC---------------
Confidence 44688999999999999999 589999999999999997 45899999999764
Q ss_pred hhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhc
Q 011103 384 ITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELL 462 (493)
Q Consensus 384 ~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~ 462 (493)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++
T Consensus 359 --------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~ 418 (515)
T 3iyg_E 359 --------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKC 418 (515)
T ss_pred --------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccC
Confidence 367899999999999999999999999999999999 99999999999999999998888
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 463 DNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 463 ~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
++.+| +|+++|++||+.||++||+|||+++
T Consensus 419 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 448 (515)
T 3iyg_E 419 PTLEQ-YAMRAFADALEVIPMALAENSGMNP 448 (515)
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 88887 5899999999999999999999985
No 18
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=5.7e-85 Score=704.79 Aligned_cols=402 Identities=24% Similarity=0.358 Sum_probs=362.0
Q ss_pred ceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhc
Q 011103 32 KEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGART 111 (493)
Q Consensus 32 ~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~ 111 (493)
+...|| .++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 38 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 111 (562)
T 3p9d_E 38 KKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKSQ 111 (562)
T ss_dssp CSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHH
T ss_pred ceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHHH
Confidence 567788 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCh-------HHHHHHHHHhcCC-
Q 011103 112 NDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED-------HELADVAAVSAGN- 183 (493)
Q Consensus 112 d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~-------~~L~~va~ts~~~- 183 (493)
|+++||||||+||||++||+++.+++++|+||+.|++||++|.+.++++|++++++++. +.|.++|+||+++
T Consensus 112 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK 191 (562)
T 3p9d_E 112 DDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSK 191 (562)
T ss_dssp HHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSS
T ss_pred HhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999988763 2699999999885
Q ss_pred -----chhHhHHHHHHHHhhccC-------Cc--eEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeE
Q 011103 184 -----DYTVGKMISDALQQVGRN-------GV--VTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKL 249 (493)
Q Consensus 184 -----~~~l~~li~~Ai~~v~~~-------g~--I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~I 249 (493)
.+.|+++++||+..+.+. +. |.+.+|++++|| ++++|++|+++|.||||.++.+ .+..++||+|
T Consensus 192 ~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kI 269 (562)
T 3p9d_E 192 IVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVKL 269 (562)
T ss_dssp TTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCEE
T ss_pred hhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccceE
Confidence 478999999999998652 22 445689999999 9999999999999999865431 1122379999
Q ss_pred EEeccc-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeee
Q 011103 250 LLVDKK-------------IKNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAI 305 (493)
Q Consensus 250 ll~d~~-------------i~~~~e-----------l~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV 305 (493)
++++++ |+++++ +.++++++.+.|+||||++++|+++++++|..|+ |.+|
T Consensus 270 all~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~------I~~v 343 (562)
T 3p9d_E 270 AILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQND------LPAV 343 (562)
T ss_dssp CEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTT------CCCE
T ss_pred EEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCC------CEEE
Confidence 998874 456666 5678999999999999999999999999998886 4667
Q ss_pred ecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEE-----ecCeEEEEecCCChhhHHHHHHHHHH
Q 011103 306 KAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI-----TKDSTLIVTDGSTRAAVEKRISEIRS 380 (493)
Q Consensus 306 ~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~~~g~~~~~~i~~~~~~l~~ 380 (493)
+. .++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|+||+||+++
T Consensus 344 ~~-----v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~------------ 401 (562)
T 3p9d_E 344 RW-----VGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET------------ 401 (562)
T ss_dssp EC-----CCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC------------
T ss_pred ec-----cCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC------------
Confidence 64 4688999999999999999 589999999999999998 36899999999764
Q ss_pred HHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHh
Q 011103 381 LAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIK 459 (493)
Q Consensus 381 ~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~ 459 (493)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++
T Consensus 402 -----------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~ 458 (562)
T 3p9d_E 402 -----------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEA 458 (562)
T ss_dssp -----------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHH
T ss_pred -----------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999 99999999999999999998
Q ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 460 ELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 460 ~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
.++++.+| +|+++|++||+.||++||+|||+++
T Consensus 459 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 491 (562)
T 3p9d_E 459 DKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDP 491 (562)
T ss_dssp HTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCH
T ss_pred ccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 88888887 5899999999999999999999984
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.4e-84 Score=694.73 Aligned_cols=393 Identities=21% Similarity=0.318 Sum_probs=358.9
Q ss_pred ccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccc
Q 011103 35 YFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDL 114 (493)
Q Consensus 35 ~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~ 114 (493)
.+| .++|..|+.||..|+++|++||||+||||||+++.|+|+|||||+|||++|+++||+ |+|++++|++||++
T Consensus 7 ~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~~ 80 (518)
T 3iyg_D 7 DKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDIE 80 (518)
T ss_pred hhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhhh
Confidence 346 789999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC--hH-HHHHHHHHhcCCc------h
Q 011103 115 AGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGND------Y 185 (493)
Q Consensus 115 ~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~-~L~~va~ts~~~~------~ 185 (493)
+||||||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. .|.++|+||++++ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~ 160 (518)
T 3iyg_D 81 AGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSS 160 (518)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHH
Confidence 9999999999999999999999999999999999999999999999999999987 45 8999999999875 8
Q ss_pred hHhHHHHHHHHhhcc---CCc-----eEe--ecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEeccc
Q 011103 186 TVGKMISDALQQVGR---NGV-----VTI--EKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK 255 (493)
Q Consensus 186 ~l~~li~~Ai~~v~~---~g~-----I~v--~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 255 (493)
.|+++++||+.++++ +|. |++ .+|+++.|+ ++++||+|+++|.| +|+..++||+|++++++
T Consensus 161 ~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~--------~mp~~i~n~kIlll~~~ 231 (518)
T 3iyg_D 161 LLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN--------SGITRVEKAKIGLIQFC 231 (518)
T ss_pred HHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc--------CCCccccCceEEEEEee
Confidence 999999999999985 454 544 478999998 99999999999987 24456889999998876
Q ss_pred C-------------CCHHH-----------HHHHHHHHHHcCCCEEEE-----ecCchHHHHHHHHHhhccccceeeeee
Q 011103 256 I-------------KNPKD-----------MFKILDSAVKEKYPIVIV-----AEDIEQQALALLIRNKLRGVLKAAAIK 306 (493)
Q Consensus 256 i-------------~~~~e-----------l~~~le~i~~~g~~lvii-----~~~i~~~al~~L~~n~~~g~~~i~aV~ 306 (493)
+ +++++ +.++++++.+.|+||||+ +++|+++++++|..+ +|+||+
T Consensus 232 Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~ 305 (518)
T 3iyg_D 232 LSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVK 305 (518)
T ss_pred ccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEe
Confidence 4 45543 567889999999999999 899999999999877 489999
Q ss_pred cCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe---c-CeEEEEecCCChhhHHHHHHHHHHHH
Q 011103 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---K-DSTLIVTDGSTRAAVEKRISEIRSLA 382 (493)
Q Consensus 307 ~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~-~~~~~~~g~~~~~~i~~~~~~l~~~~ 382 (493)
+|++ .+|+|||++|||++++ +++++++++||+|+.|++. + +++++|++|++
T Consensus 306 ~~~~-----~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~--------------- 360 (518)
T 3iyg_D 306 DIER-----EDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS--------------- 360 (518)
T ss_pred cCCH-----HHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC---------------
Confidence 8754 5899999999999999 5899999999999999863 4 68899999853
Q ss_pred hhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhh
Q 011103 383 EITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKEL 461 (493)
Q Consensus 383 ~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~ 461 (493)
+++++||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+
T Consensus 361 -------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~ 421 (518)
T 3iyg_D 361 -------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRT 421 (518)
T ss_pred -------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhc
Confidence 25689999999999999999999999999999999999 9999999999999999999888
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 462 LDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 462 ~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
.++.+| +|+++|++||+.||++||+|||+++
T Consensus 422 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 452 (518)
T 3iyg_D 422 LSGMES-YCIRAFADAMEVIPSTLAENAGLNP 452 (518)
T ss_pred CChHHH-HHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 888777 5899999999999999999999985
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.7e-84 Score=692.12 Aligned_cols=390 Identities=21% Similarity=0.306 Sum_probs=358.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCCc
Q 011103 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (493)
Q Consensus 40 ~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGT 119 (493)
.++|..|+.||+.|+++|+|||||+||||||+++.|+++|||||+|||++|+++||+ |||++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCh--H-HHHHHHHHhcCC------chhHhHH
Q 011103 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED--H-ELADVAAVSAGN------DYTVGKM 190 (493)
Q Consensus 120 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~--~-~L~~va~ts~~~------~~~l~~l 190 (493)
||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++. . .|.++|+||+++ .+.++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998874 3 899999999875 3677899
Q ss_pred HHHHHHhhccC--C----------ceEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEecc----
Q 011103 191 ISDALQQVGRN--G----------VVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDK---- 254 (493)
Q Consensus 191 i~~Ai~~v~~~--g----------~I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~---- 254 (493)
++||+..+.++ + .|.+.+|++++|| ++++|++|+++|.||. |+++++||||+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999988732 2 1345689999999 9999999999999984 677899999999998
Q ss_pred ---------cCCCHHHHHHHHH-----------HHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccc
Q 011103 255 ---------KIKNPKDMFKILD-----------SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERK 314 (493)
Q Consensus 255 ---------~i~~~~el~~~le-----------~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~ 314 (493)
.|++++++.++++ ++.+.|++|||++++|++.++++|..+ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 5778888888776 889999999999999999999999764 46776 4889
Q ss_pred cchHHHHHHHhCCeeeecccCccccCCCCCcccc-eeEEEEe---cCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHH
Q 011103 315 SHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT-AIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQ 390 (493)
Q Consensus 315 ~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~-~~~v~i~---~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~ 390 (493)
+++|+|||++|||++++ +++++++++||+ |+.|++. +++|+||+||+++
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999999 589999999999 9999864 5689999999764
Q ss_pred HHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcHHHHH
Q 011103 391 KNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKI 469 (493)
Q Consensus 391 ~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~ 469 (493)
..+||+|||+|+.+++|+||+++||||++|++++++ +|||||++|++++.+|++++.++++.+|+
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~- 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQW- 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHH-
Confidence 378999999999999999999999999999999775 99999999999999999999888898885
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 470 GAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 470 ~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
++++|++||+.||+|||+|||+++
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~ 447 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGAST 447 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCH
Confidence 899999999999999999999985
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.6e-85 Score=703.02 Aligned_cols=396 Identities=23% Similarity=0.320 Sum_probs=363.0
Q ss_pred cceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeec-CCCCcEEecChHHHhccccccCcccchHHHHHHHHHh
Q 011103 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQN-KYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (493)
Q Consensus 31 ~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~ 109 (493)
.+++.|| +++|..|+.||..|+++|++||||+||||||++ ++|+|+|||||+||+|+|+++||. |+|++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 5678899 999999999999999999999999999999999 899999999999999999999997 999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhcCcccCh-----H-HHHHHHHHhcC
Q 011103 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAA-GMNPVQIARGIEKTSKALLSELKLTSREVED-----H-ELADVAAVSAG 182 (493)
Q Consensus 110 ~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~-Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~-----~-~L~~va~ts~~ 182 (493)
+||+++||||||+||||++||+++.+++.+ |+||+.|++||++|.+.++++|+++++++++ . .|.++|+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999874 4 89999999998
Q ss_pred C------chhHhHHHHHHHHhhccCC---ceEee--cCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEE
Q 011103 183 N------DYTVGKMISDALQQVGRNG---VVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (493)
Q Consensus 183 ~------~~~l~~li~~Ai~~v~~~g---~I~v~--~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 251 (493)
+ ++.|+++++||+.++++++ .|+++ .|+++.|+ ++++||+|+++|.||| | ..++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~----p----~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ----P----KRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC----C----SCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC----C----eeeecceEEE
Confidence 6 6899999999999999987 66554 69999999 9999999999999996 3 3578999999
Q ss_pred eccc--------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeee
Q 011103 252 VDKK--------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIK 306 (493)
Q Consensus 252 ~d~~--------------i~~~~el-----------~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~ 306 (493)
++++ |++++++ .++++++.++|+||||++++|+++++++|..++ |+||+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEe
Confidence 8875 4455665 467888899999999999999999999998874 78898
Q ss_pred cCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEE---EecCeEEEEecCCChhhHHHHHHHHHHHHh
Q 011103 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEIRSLAE 383 (493)
Q Consensus 307 ~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~ 383 (493)
+|+ +.+|+|+|++|||++++ +++++++++||+|+.|+ ++++++++|.||++
T Consensus 308 ~~~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 361 (527)
T 3p9d_B 308 HAD-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA---------------- 361 (527)
T ss_dssp CCH-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC----------------
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC----------------
Confidence 665 45799999999999999 58899999999999998 46889999999864
Q ss_pred hhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhc
Q 011103 384 ITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELL 462 (493)
Q Consensus 384 ~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~ 462 (493)
++++||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.
T Consensus 362 -------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 362 -------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp -------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 4688999999999999999999999999999999999 99999999999999999998888
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 463 DNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 463 ~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
++.+| +|+++|++||+.||++||+|||+++
T Consensus 423 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 452 (527)
T 3p9d_B 423 DGKKS-LAVEAFARALRQLPTILADNAGFDS 452 (527)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCS
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHhccCCCH
Confidence 88777 5899999999999999999999985
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-83 Score=686.46 Aligned_cols=389 Identities=19% Similarity=0.289 Sum_probs=354.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCCc
Q 011103 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (493)
Q Consensus 40 ~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGT 119 (493)
+++|..|+.||+.|+++|++||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 689999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhc----CcccChH-HHHHHHHHhcCC-----chhHhH
Q 011103 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLT----SREVEDH-ELADVAAVSAGN-----DYTVGK 189 (493)
Q Consensus 120 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~----s~~v~~~-~L~~va~ts~~~-----~~~l~~ 189 (493)
||+|+||++||+++.+++++|+||+.|++||++|.+.++++|+++ +.++++. .|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5566666 899999999987 789999
Q ss_pred HHHHHHHhhccC-Cce-------EeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEeccc------
Q 011103 190 MISDALQQVGRN-GVV-------TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK------ 255 (493)
Q Consensus 190 li~~Ai~~v~~~-g~I-------~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~------ 255 (493)
+++||+.+++++ +.| .+.+|+++.|+ ++++||+|+++|.+ |++.++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccc
Confidence 999999999986 433 34579999998 99999999999865 3446789999998874
Q ss_pred -------CCCHHHHHHH-------HH----HHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccch
Q 011103 256 -------IKNPKDMFKI-------LD----SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHY 317 (493)
Q Consensus 256 -------i~~~~el~~~-------le----~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~ 317 (493)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+||++|++ .+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~~-----~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNSK-----WD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCCH-----HH
Confidence 5677887775 44 888999999999999999999987542 6899997764 57
Q ss_pred HHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe---cCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHH
Q 011103 318 LDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNIL 394 (493)
Q Consensus 318 l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l 394 (493)
|+|||++|||++++ +++++++++||+|+.|++. ++++++|++|..
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------- 352 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------- 352 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------
Confidence 99999999999999 5899999999999999874 568999998742
Q ss_pred HHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHH
Q 011103 395 NERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEI 473 (493)
Q Consensus 395 ~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~ 473 (493)
+++++||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.+| +|+++
T Consensus 353 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 424 (512)
T 3iyg_Q 353 -------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKK 424 (512)
T ss_pred -------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 35789999999999999999999999999999999999 9999999999999999999888888887 58999
Q ss_pred HHHHHHHHHHHHHHhcCCCC
Q 011103 474 FKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 474 ~a~AL~~i~~~L~~NaG~~~ 493 (493)
|++||+.||++||+|||+++
T Consensus 425 ~a~ALe~ip~~La~NaG~d~ 444 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKA 444 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCH
Confidence 99999999999999999985
No 23
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=8.4e-84 Score=696.49 Aligned_cols=405 Identities=21% Similarity=0.279 Sum_probs=365.3
Q ss_pred ceEEeecCCCCCCCCCCCCccccccceeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHH
Q 011103 7 PIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETV 86 (493)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tI 86 (493)
++++|+++++|.. |. +++|..|+.||+.|+++|+|||||+||||||+++.|+++|||||+||
T Consensus 10 ~~~~l~~~~~~~~-----------------g~-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TI 71 (568)
T 3p9d_H 10 NAGLFKQGYNSYS-----------------NA-DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATM 71 (568)
T ss_dssp CCSSCCSSCCBCC-----------------CH-HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHH
T ss_pred hhhhhhcCccccc-----------------cH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHH
Confidence 4667788877766 32 67999999999999999999999999999999999999999999999
Q ss_pred hccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCc
Q 011103 87 LKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSR 166 (493)
Q Consensus 87 l~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~ 166 (493)
|++|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|.+.++++|++++.
T Consensus 72 lk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~ 147 (568)
T 3p9d_H 72 LRELDIVHPA----VKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVV 147 (568)
T ss_dssp TTTCCCCCHH----HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHcccCCHH----HHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cc----ChH-HHHHHHHHhcC-----CchhHhHHHHHHHHhhccC-----C-------ceE--eecCCCcccceeeeece
Q 011103 167 EV----EDH-ELADVAAVSAG-----NDYTVGKMISDALQQVGRN-----G-------VVT--IEKGKCTENSLEIVEGM 222 (493)
Q Consensus 167 ~v----~~~-~L~~va~ts~~-----~~~~l~~li~~Ai~~v~~~-----g-------~I~--v~~G~~~~ds~~~i~G~ 222 (493)
++ ++. .|.++|+||++ ++++|+++++||+.+++++ + .|+ +.+|++++|| ++++|+
T Consensus 148 ~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~ 226 (568)
T 3p9d_H 148 GEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGM 226 (568)
T ss_dssp SCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSC
T ss_pred ccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccE
Confidence 76 344 89999999975 3589999999999999874 3 344 4579999999 999999
Q ss_pred EEecccCCCccccCcCCceeEec---ceeEEEeccc-------------CCCHHHHHH-----------HHHHHHHcCCC
Q 011103 223 RFDRGFLSPYFVTDRQKRTVEFH---DGKLLLVDKK-------------IKNPKDMFK-----------ILDSAVKEKYP 275 (493)
Q Consensus 223 ~~~~~~~~p~~~~~~~~~~~~~~---n~~Ill~d~~-------------i~~~~el~~-----------~le~i~~~g~~ 275 (493)
+|+++|. +|+++++ ||||++++++ |++++++.+ +++++.+.|+|
T Consensus 227 v~dk~~~---------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~ 297 (568)
T 3p9d_H 227 VFNREPE---------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVE 297 (568)
T ss_dssp CBSSCBS---------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEeeccc---------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 9999863 3667888 9999999987 677877765 67889999999
Q ss_pred EEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEe
Q 011103 276 IVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT 355 (493)
Q Consensus 276 lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~ 355 (493)
|||++++|+++++++|..+ +|+||++| ++.+|+|||++|||++++ +++++++++||+|+.|++.
T Consensus 298 vvi~~~~I~~~al~~L~~~------gI~av~~v-----~~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~ 361 (568)
T 3p9d_H 298 CIVAGAGVGELALHYLNRY------GILVLKVP-----SKFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTM 361 (568)
T ss_dssp EEEECSCCCHHHHHHHHHH------TCEEECCC-----CHHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCC
T ss_pred EEEECCCcChHHHHHHHHC------CeEEEecC-----CHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEE
Confidence 9999999999999999876 47999866 467999999999999999 5899999999999999864
Q ss_pred ---cCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHH
Q 011103 356 ---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNAT 432 (493)
Q Consensus 356 ---~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~ 432 (493)
+++|+||++|+. |+++++||+|||+|+.+++|.||+++||||++
T Consensus 362 ~ig~~~~~~~~g~~~---------------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vv 408 (568)
T 3p9d_H 362 EIGGDRVTVFKQEQG---------------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAV 408 (568)
T ss_dssp EETTEECBCCCCCSS---------------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EecCceEEEEecCCC---------------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence 589999999852 23568899999999999999999999999999
Q ss_pred HHHHh--cC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 433 KAAIE--EG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 433 ~~al~--~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
|++++ ++ +|||||++|++|+.+|++++.++++.+|+ ++++|++||+.||++||+|||+++
T Consensus 409 r~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~-~i~~fa~ALe~ip~~La~NaG~d~ 471 (568)
T 3p9d_H 409 KGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQL-AIKQFAVAFEVVPRTLAETAGLDV 471 (568)
T ss_dssp HHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHH-HHHHHHHGGGHHHHHHHHHHTCCH
T ss_pred HHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHH-HHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999 65 99999999999999999999888888884 899999999999999999999984
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.4e-83 Score=682.19 Aligned_cols=389 Identities=22% Similarity=0.362 Sum_probs=350.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCCc
Q 011103 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (493)
Q Consensus 40 ~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGT 119 (493)
.+++..|+.||+.|+++|+|||||+||||||+++.|+++|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 9 ~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e~GDGT 84 (517)
T 3iyg_Z 9 QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDITGDGT 84 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC-hH-HHHHHHHHhcCC------chhHhHHH
Q 011103 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE-DH-ELADVAAVSAGN------DYTVGKMI 191 (493)
Q Consensus 120 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~-~~-~L~~va~ts~~~------~~~l~~li 191 (493)
||+|+||++||+++.+++++|+||+.|++||++|.+.++++|++++++++ +. .|.++|+||+++ .+.|++++
T Consensus 85 TtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~ 164 (517)
T 3iyg_Z 85 TSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAV 164 (517)
T ss_pred eeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887 55 899999999875 47899999
Q ss_pred HHHHHhhccCC--------ceEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEecccC-------
Q 011103 192 SDALQQVGRNG--------VVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI------- 256 (493)
Q Consensus 192 ~~Ai~~v~~~g--------~I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i------- 256 (493)
+||+..+.+++ .|.+.+|++..|| ++++|++|+++|.||| |+++++||+|+++|+++
T Consensus 165 vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 165 VDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccccccccc
Confidence 99999886532 2456799999999 9999999999999997 56789999999999864
Q ss_pred ------CCHHHHHH-----------HHHHHHHcCCC--------E-EEEecCchHHHHHHHHHhhccccceeeeeecCcc
Q 011103 257 ------KNPKDMFK-----------ILDSAVKEKYP--------I-VIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAF 310 (493)
Q Consensus 257 ------~~~~el~~-----------~le~i~~~g~~--------l-vii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~ 310 (493)
++++++.+ .++++...+.+ + ||++++|+++++++|..+ +|++|+
T Consensus 237 ~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~v~---- 306 (517)
T 3iyg_Z 237 NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIALR---- 306 (517)
T ss_pred ceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEEEE----
Confidence 44555443 44555555544 3 566799999999999775 367776
Q ss_pred cccccchHHHHHHHhCCeeeecccCccccCCCCCc-ccceeEE---EEecCeEEEEecCCChhhHHHHHHHHHHHHhhhh
Q 011103 311 GERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEV-LGTAIKV---VITKDSTLIVTDGSTRAAVEKRISEIRSLAEITE 386 (493)
Q Consensus 311 ~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~-lG~~~~v---~i~~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~ 386 (493)
++++++|+|||++|||++++ +++++++++ ||+|+ | .+++++|+||+||+++.
T Consensus 307 -~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~----------------- 362 (517)
T 3iyg_Z 307 -RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR----------------- 362 (517)
T ss_pred -ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCch-----------------
Confidence 45788999999999999999 589999999 99999 9 45789999999997653
Q ss_pred HHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcH
Q 011103 387 ERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNE 465 (493)
Q Consensus 387 ~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~ 465 (493)
.+||+|||+|+.+++|.||+++||||++|+++++| +|||||++|++++.+|++++.+.++.
T Consensus 363 ------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 424 (517)
T 3iyg_Z 363 ------------------SVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGR 424 (517)
T ss_pred ------------------hheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHH
Confidence 46899999999999999999999999999999999 99999999999999999999888787
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 466 EQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 466 ~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
+| +++++|++||+.+|+|||+|||+|+
T Consensus 425 eq-~~i~~~a~ALe~iP~~La~NaG~d~ 451 (517)
T 3iyg_Z 425 AQ-LGVQAFADALLIIPKVLAQNSGFDL 451 (517)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 77 5899999999999999999999985
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2e-82 Score=683.94 Aligned_cols=395 Identities=21% Similarity=0.312 Sum_probs=350.1
Q ss_pred eeccCCcHHHHHHHHHHHHHHHHhhhhccCCCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcc
Q 011103 33 EVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTN 112 (493)
Q Consensus 33 ~i~~g~~~~~~~~~~~~~~~la~~v~stlGP~G~~kmI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d 112 (493)
+...| .+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+|||++|+++||+ |+|++++|++||
T Consensus 11 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 11 ESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp EEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred chhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 44457 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC----hH-HHHHHHHHhcCC----
Q 011103 113 DLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE----DH-ELADVAAVSAGN---- 183 (493)
Q Consensus 113 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~----~~-~L~~va~ts~~~---- 183 (493)
+++||||||+||||++||+++.+++++|+||+.|++||++|.+.++++|++++++++ +. .|.++|+||+++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999885 33 899999999985
Q ss_pred --chhHhHHHHHHHHhhccC-------Cc--eEeecCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEe
Q 011103 184 --DYTVGKMISDALQQVGRN-------GV--VTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (493)
Q Consensus 184 --~~~l~~li~~Ai~~v~~~-------g~--I~v~~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~ 252 (493)
.+.|+++++||+..+.+. .. |.+.+|++..|| ++++|++|+++|.||+ |+++++||+|+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 478999999999998641 12 345689999999 9999999999999984 6778999999999
Q ss_pred cccC-------------CCHHHHH-----------HHHHHHHH---------cCCC-EEEEecCchHHHHHHHHHhhccc
Q 011103 253 DKKI-------------KNPKDMF-----------KILDSAVK---------EKYP-IVIVAEDIEQQALALLIRNKLRG 298 (493)
Q Consensus 253 d~~i-------------~~~~el~-----------~~le~i~~---------~g~~-lvii~~~i~~~al~~L~~n~~~g 298 (493)
|+++ ++++++. +.++.+.. .|+| |||++++|+++++++|..|+
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g--- 313 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN--- 313 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT---
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC---
Confidence 9864 3333332 23455544 3455 66667899999999998874
Q ss_pred cceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEE---EecCeEEEEecCCChhhHHHHH
Q 011103 299 VLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRI 375 (493)
Q Consensus 299 ~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~g~~~~~~i~~~~ 375 (493)
|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++|+||+||+++
T Consensus 314 ---I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 373 (546)
T 3p9d_F 314 ---ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------- 373 (546)
T ss_dssp ---CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------
T ss_pred ---CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------
Confidence 57776 55788999999999999999 58999999999999995 578999999999865
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHH
Q 011103 376 SEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAK 454 (493)
Q Consensus 376 ~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~ 454 (493)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+
T Consensus 374 ----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~ 425 (546)
T 3p9d_F 374 ----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRY 425 (546)
T ss_dssp ----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHH
T ss_pred ----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHH
Confidence 367999999999999999999999999999999999 999999999999999
Q ss_pred HHh---HhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 455 VEG---IKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 455 L~~---~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
|++ ++.+.++.+| +|+++|++||+.||++||+|||+++
T Consensus 426 L~~~~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~ 466 (546)
T 3p9d_F 426 LRSANMNKLGAKGKTK-TGIEAFAEALLVIPKTLVKNSGFDP 466 (546)
T ss_dssp HHHHHTTTTTTTSHHH-HHHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred HHhhhhhhhcCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999 5777888887 5899999999999999999999985
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.3e-76 Score=630.55 Aligned_cols=361 Identities=23% Similarity=0.356 Sum_probs=288.7
Q ss_pred EeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 011103 69 VLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIAR 148 (493)
Q Consensus 69 mI~~~~g~~~iTnDG~tIl~~i~~~~p~~~~gakll~~~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~ 148 (493)
||+++.|+++|||||+||||+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 7888999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCcccCh--H-HHHHHHHHhcC------CchhHhHHHHHHHHhhccC--Cc--------eEe--e
Q 011103 149 GIEKTSKALLSELKLTSREVED--H-ELADVAAVSAG------NDYTVGKMISDALQQVGRN--GV--------VTI--E 207 (493)
Q Consensus 149 G~~~a~~~~l~~L~~~s~~v~~--~-~L~~va~ts~~------~~~~l~~li~~Ai~~v~~~--g~--------I~v--~ 207 (493)
||++|++.++++|+++++|++. . .|.++|+||++ +++.|+++++||+.+++++ |. |++ .
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999874 4 89999998854 5799999999999999876 42 444 4
Q ss_pred cCCCcccceeeeeceEEecccCCCccccCcCCceeEecceeEEEeccc-------------CCCHHHH-----------H
Q 011103 208 KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------F 263 (493)
Q Consensus 208 ~G~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~el-----------~ 263 (493)
+|++++|| ++++|++|+++|.|||| +++++||||+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999998 99999999999999975 558999999999998 7777775 7
Q ss_pred HHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCC
Q 011103 264 KILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGK 343 (493)
Q Consensus 264 ~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~ 343 (493)
++++++.+.|+||||++++|+++++++|..|+ |+||+ ++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 88999999999999999999999999998874 68885 78899999999999999999 5899999
Q ss_pred CcccceeEEEEe---cCeEEEEecCCChhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHH
Q 011103 344 EVLGTAIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKD 420 (493)
Q Consensus 344 ~~lG~~~~v~i~---~~~~~~~~g~~~~~~i~~~~~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI~l~G~t~~~l~E 420 (493)
++||+|+.|++. +++|+||+||++ ++++||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCcHHHHHH
Confidence 999999999985 899999999864 358899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccCchhhhHHHHHHHhHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011103 421 KQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGPIQ 493 (493)
Q Consensus 421 ~~~~~~dAl~a~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~~~~~~q~~~~~~~a~AL~~i~~~L~~NaG~~~ 493 (493)
+||+++||||++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+++
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~ 410 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDP 410 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999 9999999999999999999988888777 5899999999999999999999984
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.9e-48 Score=350.98 Aligned_cols=193 Identities=41% Similarity=0.739 Sum_probs=189.4
Q ss_pred eeeeeceEEecccCCCccccCcCCceeEecceeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEecCchHHHHHHHHHhh
Q 011103 216 LEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNK 295 (493)
Q Consensus 216 ~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~el~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~ 295 (493)
+++++||.|++||+||||++++++|..+++||+||++|.+|+++++++|+||.+.+.|.||+|+++||+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEecCeEEEEecCCChhhHHHHH
Q 011103 296 LRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTDGSTRAAVEKRI 375 (493)
Q Consensus 296 ~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~g~~~~~~i~~~~ 375 (493)
++|.++|+|||+|+||+.|+..|+|||.+|||+++++++|+++++++.++||+|+++.+++++|++++|.+++++|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEE
Q 011103 376 SEIRSLAEITEERFQKNILNERIARLSGGIAIL 408 (493)
Q Consensus 376 ~~l~~~~~~~~~~~~~~~l~~rl~~l~~~~~tI 408 (493)
++|+.+++.++|+|+|++|+||+++|+||+++|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999854
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.6e-46 Score=342.26 Aligned_cols=189 Identities=44% Similarity=0.764 Sum_probs=185.2
Q ss_pred eeeceEEecccCCCccccCcCCceeEecceeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhcc
Q 011103 218 IVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLR 297 (493)
Q Consensus 218 ~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~el~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~ 297 (493)
=.+||.|++||+||||++++++|..+++||+||++|.+|+++++++|+||.+.+.|.||+|+++||+++||++|+.|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEecCeEEEEecCCChhhHHHHHHH
Q 011103 298 GVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTDGSTRAAVEKRISE 377 (493)
Q Consensus 298 g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~g~~~~~~i~~~~~~ 377 (493)
|.++|+|||+|+||+.|+..|+|||.+|||+++++++|+++++++.++||+|++|.+++++|++++|.+++++|++|+++
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhhhcCCeE
Q 011103 378 IRSLAEITEERFQKNILNERIARLSGGIA 406 (493)
Q Consensus 378 l~~~~~~~~~~~~~~~l~~rl~~l~~~~~ 406 (493)
|+.+++.++|+|+||+|+|||++|+|+++
T Consensus 171 Ir~qie~t~S~ydkEKLqERLAKLsGGVA 199 (201)
T 3osx_A 171 IRQQIEESTSDYDREKLQERVAKLAGGVK 199 (201)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999987
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=7.5e-36 Score=259.49 Aligned_cols=144 Identities=46% Similarity=0.788 Sum_probs=141.9
Q ss_pred ceEEecccCCCccccCcCCceeEecceeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEecCchHHHHHHHHHhhccccc
Q 011103 221 GMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVL 300 (493)
Q Consensus 221 G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~el~~~le~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~ 300 (493)
||.|++||+||||++++++|..+++||+||++|.+|+++++++|+||++.+.|.||+|++++|+++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEEecCeEEEEec
Q 011103 301 KAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTD 364 (493)
Q Consensus 301 ~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~g 364 (493)
+++|||+|+||+.|+..|+|||.+|||+++++++|+++++++.++||+|+++.+++++|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.88 E-value=1.3e-22 Score=187.55 Aligned_cols=133 Identities=19% Similarity=0.315 Sum_probs=111.2
Q ss_pred cccceeeeeceEEecccCCCccccCcCCceeEecceeEEEecccC-------------CCHHH-----------HHHHHH
Q 011103 212 TENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI-------------KNPKD-----------MFKILD 267 (493)
Q Consensus 212 ~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i-------------~~~~e-----------l~~~le 267 (493)
++|| ++++|++|++.+.+| +|++.++||||+++++++ +++++ +.++++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4688 899999999998876 467789999999999863 33333 344678
Q ss_pred HHHHcCCCEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCccc
Q 011103 268 SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLG 347 (493)
Q Consensus 268 ~i~~~g~~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG 347 (493)
++.+.|+|+|+++++|++.++++|..++ |+||+ ++++++|+|||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRAN------VTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCC------CEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 8999999999999999999999997764 68876 67899999999999999999 58999999999
Q ss_pred c-eeEEEE---ecCeEEEEecCCCh
Q 011103 348 T-AIKVVI---TKDSTLIVTDGSTR 368 (493)
Q Consensus 348 ~-~~~v~i---~~~~~~~~~g~~~~ 368 (493)
+ |+.+++ ++++++||+||+++
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~ 161 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP 161 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST
T ss_pred CcccEEEEEEECCeEEEEEECCCCC
Confidence 9 999985 57899999999754
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.80 E-value=4.2e-19 Score=160.83 Aligned_cols=127 Identities=20% Similarity=0.319 Sum_probs=108.4
Q ss_pred eeceEEecccCCCccccCcCCceeEecceeEEEecccC-------------CCHHHH-----------HHHHHHHHHcCC
Q 011103 219 VEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI-------------KNPKDM-----------FKILDSAVKEKY 274 (493)
Q Consensus 219 i~G~~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i-------------~~~~el-----------~~~le~i~~~g~ 274 (493)
++|++|++++.+| +|++.++||||+++++++ ++++++ ..+++++.+.|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 5799999998876 467789999999999863 455444 346788999999
Q ss_pred CEEEEecCchHHHHHHHHHhhccccceeeeeecCcccccccchHHHHHHHhCCeeeecccCccccCCCCCcccceeEEEE
Q 011103 275 PIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI 354 (493)
Q Consensus 275 ~lvii~~~i~~~al~~L~~n~~~g~~~i~aV~~~~~~~~~~~~l~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i 354 (493)
|+||++++|++.++++|..++ |+||+ ++++++|+|||++|||++++ ++++++++.||+|+.|++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 999999999999999997764 68876 67899999999999999999 589999999999999986
Q ss_pred ---ecCeEEEEecCCCh
Q 011103 355 ---TKDSTLIVTDGSTR 368 (493)
Q Consensus 355 ---~~~~~~~~~g~~~~ 368 (493)
+++++++|+||.+.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 57899999999753
Done!