Query 011107
Match_columns 493
No_of_seqs 219 out of 1451
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 20:57:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 3E-100 9E-105 796.4 46.0 442 4-452 31-483 (490)
2 3sza_A Aldehyde dehydrogenase, 100.0 5E-100 2E-104 792.5 48.0 456 10-470 11-468 (469)
3 3ros_A NAD-dependent aldehyde 100.0 2.3E-97 8E-102 774.7 47.3 440 4-452 13-458 (484)
4 3iwj_A Putative aminoaldehyde 100.0 4E-97 1E-101 777.8 48.3 445 4-452 32-489 (503)
5 3lns_A Benzaldehyde dehydrogen 100.0 1.2E-96 4E-101 766.8 48.2 442 3-451 14-456 (457)
6 4f3x_A Putative aldehyde dehyd 100.0 3.8E-97 1E-101 775.6 43.8 443 4-452 49-497 (498)
7 3rh9_A Succinate-semialdehyde 100.0 7.4E-97 3E-101 774.1 45.7 441 4-452 36-484 (506)
8 3ed6_A Betaine aldehyde dehydr 100.0 1.6E-96 5E-101 774.0 48.0 442 4-452 57-510 (520)
9 3ifg_A Succinate-semialdehyde 100.0 5.1E-97 2E-101 772.8 42.3 441 4-451 37-483 (484)
10 2o2p_A Formyltetrahydrofolate 100.0 1.9E-96 6E-101 773.0 43.9 444 4-451 61-516 (517)
11 3qan_A 1-pyrroline-5-carboxyla 100.0 3E-96 1E-100 774.9 45.7 443 5-452 62-516 (538)
12 3ek1_A Aldehyde dehydrogenase; 100.0 9.1E-97 3E-101 773.1 41.2 441 4-452 57-502 (504)
13 1wnd_A Putative betaine aldehy 100.0 5.1E-96 2E-100 766.6 46.0 442 4-451 47-494 (495)
14 1a4s_A ALDH, betaine aldehyde 100.0 9.8E-96 3E-100 766.6 47.4 441 4-452 45-496 (503)
15 3i44_A Aldehyde dehydrogenase; 100.0 1.3E-95 5E-100 763.7 48.2 436 4-449 50-495 (497)
16 3u4j_A NAD-dependent aldehyde 100.0 8.4E-96 3E-100 769.9 46.4 441 5-452 49-498 (528)
17 3prl_A NADP-dependent glyceral 100.0 6.6E-96 2E-100 767.5 44.4 441 4-452 36-483 (505)
18 3r31_A BADH, betaine aldehyde 100.0 1.6E-96 6E-101 773.4 39.5 446 4-459 39-495 (517)
19 1bxs_A Aldehyde dehydrogenase; 100.0 1E-95 3E-100 765.4 44.8 441 4-451 45-495 (501)
20 3k2w_A Betaine-aldehyde dehydr 100.0 6.1E-96 2E-100 767.7 42.2 442 4-452 37-488 (497)
21 1o04_A Aldehyde dehydrogenase, 100.0 6.4E-96 2E-100 766.7 41.5 441 4-451 44-494 (500)
22 3b4w_A Aldehyde dehydrogenase; 100.0 1.1E-95 4E-100 764.8 41.9 440 4-451 33-481 (495)
23 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.7E-95 2.3E-99 763.2 47.4 444 4-451 61-515 (516)
24 4e4g_A Methylmalonate-semialde 100.0 2E-95 7E-100 765.8 43.3 443 4-452 51-505 (521)
25 3pqa_A Lactaldehyde dehydrogen 100.0 3E-95 1E-99 759.1 44.1 435 4-452 21-464 (486)
26 2d4e_A 5-carboxymethyl-2-hydro 100.0 4.7E-95 1.6E-99 763.5 45.8 441 4-452 51-505 (515)
27 2imp_A Lactaldehyde dehydrogen 100.0 4.3E-95 1.5E-99 759.3 45.1 441 4-451 31-478 (479)
28 3etf_A Putative succinate-semi 100.0 7.5E-95 2.6E-99 755.3 46.5 441 4-452 16-461 (462)
29 3jz4_A Succinate-semialdehyde 100.0 7.2E-95 2.5E-99 757.9 45.2 441 4-451 34-480 (481)
30 4h7n_A Aldehyde dehydrogenase; 100.0 9.6E-95 3.3E-99 755.7 43.0 450 4-459 15-470 (474)
31 2ve5_A BADH, betaine aldehyde 100.0 3.7E-94 1.3E-98 754.8 45.6 442 4-452 31-483 (490)
32 2w8n_A Succinate-semialdehyde 100.0 1.1E-94 3.7E-99 756.5 41.1 441 4-451 35-485 (487)
33 3r64_A NAD dependent benzaldeh 100.0 3.5E-94 1.2E-98 756.3 44.7 442 4-453 37-486 (508)
34 2j6l_A Aldehyde dehydrogenase 100.0 4.2E-94 1.4E-98 754.4 45.1 442 4-451 46-498 (500)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 1.7E-94 5.9E-99 756.8 41.6 449 4-461 41-500 (501)
36 4dng_A Uncharacterized aldehyd 100.0 1.1E-93 3.7E-98 750.3 44.7 442 4-452 31-478 (485)
37 1euh_A NADP dependent non phos 100.0 7.8E-94 2.7E-98 749.0 42.2 437 4-451 27-473 (475)
38 3ty7_A Putative aldehyde dehyd 100.0 1.6E-93 5.5E-98 747.7 39.7 434 4-449 32-474 (478)
39 1t90_A MMSDH, probable methylm 100.0 6.3E-93 2.2E-97 743.6 43.0 442 4-452 30-480 (486)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 1.1E-92 3.6E-97 749.2 41.6 454 4-464 87-561 (563)
41 3ju8_A Succinylglutamic semial 100.0 5.8E-90 2E-94 721.9 43.0 435 4-452 29-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 5.6E-90 1.9E-94 765.9 44.0 444 4-452 555-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 1.1E-88 3.6E-93 719.4 36.6 443 4-452 31-519 (534)
44 3haz_A Proline dehydrogenase; 100.0 6.1E-87 2.1E-91 740.0 45.2 434 11-452 544-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 2.1E-86 7.4E-91 700.9 37.2 434 4-448 49-514 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 2.2E-85 7.6E-90 690.4 38.4 432 4-449 16-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 4.5E-80 1.6E-84 641.8 27.0 405 18-466 15-449 (468)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 4.5E-80 1.5E-84 641.0 25.3 410 4-468 16-446 (463)
49 3k9d_A LMO1179 protein, aldehy 100.0 6.1E-79 2.1E-83 634.8 29.7 416 8-451 3-448 (464)
50 4ghk_A Gamma-glutamyl phosphat 100.0 4.6E-76 1.6E-80 609.4 31.3 390 16-453 25-440 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 3.8E-76 1.3E-80 607.0 27.6 387 16-452 13-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.9E-75 6.6E-80 606.5 29.7 375 11-413 1-402 (452)
53 4gic_A HDH, histidinol dehydro 97.4 0.092 3.1E-06 52.1 25.9 336 31-448 25-399 (423)
54 1kae_A HDH, histidinol dehydro 96.5 0.79 2.7E-05 45.5 25.1 328 39-449 30-393 (434)
55 3v42_A Folliculin; tumor suppr 52.9 22 0.00074 32.1 5.8 46 137-184 21-66 (226)
56 2fiu_A Conserved hypothetical 47.9 43 0.0015 25.8 6.2 22 359-380 55-76 (99)
57 1s7i_A Hypothetical protein PA 45.7 49 0.0017 26.7 6.5 70 307-381 32-108 (124)
58 3fgh_A Transcription factor A, 26.5 92 0.0032 21.6 4.5 36 25-60 29-64 (67)
59 3lo3_A Uncharacterized conserv 23.0 1.9E+02 0.0065 21.7 6.0 23 358-380 53-75 (94)
60 3hhl_A RPA0582; alpha-beta-bar 22.3 1.5E+02 0.005 24.5 5.6 64 301-380 45-110 (143)
61 2co9_A Thymus high mobility gr 21.8 2.1E+02 0.0071 21.8 6.1 38 26-63 49-86 (102)
62 1use_A VAsp, vasodilator-stimu 21.0 68 0.0023 20.8 2.4 28 41-68 13-40 (45)
63 2eqz_A High mobility group pro 20.2 1.3E+02 0.0044 22.1 4.5 36 25-60 48-83 (86)
64 2ioj_A Hypothetical protein AF 20.2 45 0.0015 27.2 2.0 46 176-221 53-100 (139)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.7e-100 Score=796.35 Aligned_cols=442 Identities=24% Similarity=0.342 Sum_probs=412.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
++|++++++.++.+|+++|+++|++||..|+++|.++|.++|++++++|+++.++|+++++.|+|||+.+++..|+..++
T Consensus 31 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~ 110 (490)
T 2wme_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999755799999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+.... .+ ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 111 ~~~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~ 186 (490)
T 2wme_A 111 DVLEYYAGLVPAIEGEQ-IP---LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEE-EE---EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHhccccccCcc-cc---ccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHH
Confidence 99999998877654322 11 123445788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHH-HHhccccchhhhcCCCCeEEEcCCCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~-~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.+++ .+++++||+++|||||||+||++|||
T Consensus 187 ~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAd 266 (490)
T 2wme_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCcc
Confidence 999999999 99999999999 567899999996 999999999999998876 55667899999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|||. +++++||++++.+++++.++|+++.
T Consensus 267 l~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~ 345 (490)
T 2wme_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999985 7899999999999999999999986
Q ss_pred h-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 319 V-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 319 ~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
. ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 346 ~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~ 425 (490)
T 2wme_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred hcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHH
Confidence 5 67999999763 25899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 426 ~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 426 RAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 999999999999999998654 4678999999999999999999999999999999875
No 2
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=5e-100 Score=792.52 Aligned_cols=456 Identities=43% Similarity=0.756 Sum_probs=416.7
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHH
Q 011107 10 KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89 (493)
Q Consensus 10 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~ 89 (493)
..+.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++
T Consensus 11 ~~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 90 (469)
T 3sza_A 11 VPRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYM 90 (469)
T ss_dssp -------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999998766999999999999
Q ss_pred HHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 011107 90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l 169 (493)
++.++.|..+..........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~ 170 (469)
T 3sza_A 91 IQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATII 170 (469)
T ss_dssp HHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 99998887654433222223456788999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHH
Q 011107 170 GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM 249 (493)
Q Consensus 170 ~~alP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~ 249 (493)
.+++|+|++|+++|+.+.+..|+.|++|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++
T Consensus 171 ~~alP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~ 250 (469)
T 3sza_A 171 PQYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAW 250 (469)
T ss_dssp HHHSCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred HHhCCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHH
Confidence 99999999999999877788898889999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCcc
Q 011107 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (493)
Q Consensus 250 ~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~ 329 (493)
++| .|+||.|++++|||||+++||+|+++|+++++++.++++++++++||++++++++++.+++ +++++++||..
T Consensus 251 ~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~ 325 (469)
T 3sza_A 251 GKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG 325 (469)
T ss_dssp HHH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred HHH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence 999 9999999999999999999999999999999998644446789999999999999999999 47899999987
Q ss_pred CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEc
Q 011107 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409 (493)
Q Consensus 330 ~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 409 (493)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||
T Consensus 326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN 405 (469)
T 3sza_A 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405 (469)
T ss_dssp ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCC--CCccCCCCchhHHH
Q 011107 410 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPPYTKGKLR 470 (493)
Q Consensus 410 ~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 470 (493)
++..+...+.+||||+|.||+|+++|.+|+++||+.|+|+++..+.+ .+++||||+..+.+
T Consensus 406 ~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 406 DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp CSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 98766567899999999999999999999999999999999876544 57899999987654
No 3
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.3e-97 Score=774.70 Aligned_cols=440 Identities=20% Similarity=0.315 Sum_probs=416.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 13 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 91 (484)
T 3ros_A 13 TNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCV 91 (484)
T ss_dssp TTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++........ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 92 ~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 167 (484)
T 3ros_A 92 SICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167 (484)
T ss_dssp HHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999999998876543221 3456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+|+.+ .++ |+.|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 168 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl 246 (484)
T 3ros_A 168 LTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADP 246 (484)
T ss_dssp HHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCH
Confidence 999999999 99999999999654 566 99995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++|+++.+
T Consensus 247 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (484)
T 3ros_A 247 QVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID 325 (484)
T ss_dssp HHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 78999999999999999999999865
Q ss_pred -CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 405 (484)
T 3ros_A 326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV 405 (484)
T ss_dssp TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 6799999975 35789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 406 ~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 406 SAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 9999999999999643 5688999999999999999999999999999999875
No 4
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=4e-97 Score=777.82 Aligned_cols=445 Identities=27% Similarity=0.426 Sum_probs=416.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh-----hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA-----SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 78 (493)
+++++++++.++.+|+++++++|++||. .|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~e 110 (503)
T 3iwj_A 32 TQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WD 110 (503)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999996 59
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCc
Q 011107 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (493)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~ 158 (493)
+..+++.+++++...+++.............+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t 190 (503)
T 3iwj_A 111 IDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcc
Confidence 99999999999999887754332111111123457889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEc
Q 011107 159 PASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (493)
Q Consensus 159 ~~~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~ 235 (493)
|+++..+++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||+
T Consensus 191 p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~ 270 (503)
T 3iwj_A 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF 270 (503)
T ss_dssp CHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc
Confidence 99999999999999 99999999999 457889999995 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 314 (493)
+|||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.+++
T Consensus 271 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 349 (503)
T 3iwj_A 271 EDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV 349 (503)
T ss_dssp SSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999985 689999999999999999999
Q ss_pred HHHHh-CCeEEeCCccC---CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 315 DDDKV-SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 315 ~~a~~-~~~~~~gg~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
+++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 350 ~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 429 (503)
T 3iwj_A 350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND 429 (503)
T ss_dssp HHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSC
T ss_pred HHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 99865 67999999764 468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 430 ~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 430 LERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp HHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 99999999999999999998643 5688999999999999999999999999999999875
No 5
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.2e-96 Score=766.75 Aligned_cols=442 Identities=33% Similarity=0.591 Sum_probs=407.9
Q ss_pred chhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..+
T Consensus 14 ~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~ 93 (457)
T 3lns_A 14 HIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93 (457)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHH
T ss_pred CCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999975699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.++++++.++++..++.........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 94 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 173 (457)
T 3lns_A 94 LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETS 173 (457)
T ss_dssp HHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 99999999999988765443322222345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 163 SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 163 ~~l~~~l~~alP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
.++++++.+++|+|+||+|+|+.+.+.+|+++++|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.
T Consensus 174 ~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~ 253 (457)
T 3lns_A 174 AVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQ 253 (457)
T ss_dssp HHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHH
T ss_pred HHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHH
Confidence 99999999999999999999988889999987799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCe
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~ 322 (493)
|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++ |.+. ++||++++++++++.++++++ +++
T Consensus 254 Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~~ 326 (457)
T 3lns_A 254 TVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QGQ 326 (457)
T ss_dssp HHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CSE
T ss_pred HHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CCe
Confidence 9999999999 99999999999999999999999999999999988 4444 999999999999999999975 369
Q ss_pred EEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHhhc
Q 011107 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETV 401 (493)
Q Consensus 323 ~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v~t~d~~~~~~~~~~l 401 (493)
+++||..+..|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.++++++++++
T Consensus 327 ~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l 406 (457)
T 3lns_A 327 VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI 406 (457)
T ss_dssp EEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS
T ss_pred EEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC
Confidence 9999986657899999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 402 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 402 ~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++|+|+||+++.+...+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 407 ~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 407 QSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp CCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999987655678999999999999999999999999999999764
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=3.8e-97 Score=775.64 Aligned_cols=443 Identities=19% Similarity=0.316 Sum_probs=415.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++...|+..++
T Consensus 49 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~ 128 (498)
T 4f3x_A 49 TGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII 128 (498)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999446999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++.... .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 129 ~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~ 205 (498)
T 4f3x_A 129 DCWRFFAGAVRNLHAPA-AGE--YLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL 205 (498)
T ss_dssp HHHHHHHHHTTCCEEEC-BEE--EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccC--CcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHH
Confidence 99999999887754321 111 112446788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.+++|+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 206 ~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~ 285 (498)
T 4f3x_A 206 KLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLE 285 (498)
T ss_dssp HHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHH
Confidence 99999999999999999999 567899999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.+++++.++|+++.+
T Consensus 286 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 286 AVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 999999999999999999999999999999999999998 478999999999999999999999865
Q ss_pred CC-eEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 SG-KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~~-~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++ ++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 67 999999763 4789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 445 a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 445 ASRLQYGCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHCCSSEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCcceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 99999999999997764 488999999999999999999999999999998753
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=7.4e-97 Score=774.09 Aligned_cols=441 Identities=22% Similarity=0.327 Sum_probs=415.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 114 (506)
T 3rh9_A 36 TGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAA 114 (506)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeee-ecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP-EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
+.+++++..++++.... .+. ..+...++++ +|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 115 ~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 190 (506)
T 3rh9_A 115 GFFDYCAKHISALDSHT-IPE---KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTM 190 (506)
T ss_dssp HHHHHHHHHGGGGCCEE-CSC---CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc---CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHH
Confidence 99999999998875432 111 1244567888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 191 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dAD 270 (506)
T 3rh9_A 191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDAD 270 (506)
T ss_dssp HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCC
Confidence 9999999999 99999999999 567899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++++++++.++|+++.
T Consensus 271 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 349 (506)
T 3rh9_A 271 LEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDAL 349 (506)
T ss_dssp HHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999884 7899999999999999999999996
Q ss_pred h-CCeEEeCCcc-CC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 319 V-SGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 319 ~-~~~~~~gg~~-~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+ ++++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 350 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~ 429 (506)
T 3rh9_A 350 DKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429 (506)
T ss_dssp HTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHH
T ss_pred HCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 5 6799999975 33 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 430 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 430 RVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999765 3578999999999999999999999999999998875
No 8
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.6e-96 Score=773.98 Aligned_cols=442 Identities=22% Similarity=0.362 Sum_probs=415.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
+++++++++..+.+|+++|+++|++|| ..|+.++.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~ 135 (520)
T 3ed6_A 57 NQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDD 135 (520)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHH
Confidence 578999999999999999999999999 899999999999999999999999999999999999999999997 59999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+.+... ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 136 ~~~~~~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t 212 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGE-MIDS--PIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212 (520)
T ss_dssp HHHHHHHHHHHTTSCCEE-EECC--SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCe-eccc--CCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHH
Confidence 999999999988765432 1111 1123456889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++||
T Consensus 213 ~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dA 292 (520)
T 3ed6_A 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292 (520)
T ss_dssp HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCC
Confidence 99999999999 99999999999 668899999996 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.++++++++|+++
T Consensus 293 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a 371 (520)
T 3ed6_A 293 DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVA 371 (520)
T ss_dssp CHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 789999999999999999999998
Q ss_pred Hh-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 318 KV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 318 ~~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 372 ~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 451 (520)
T 3ed6_A 372 KAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDI 451 (520)
T ss_dssp HHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred HhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 65 66999999764 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++++|+|+||++..+ .+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 452 ~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 452 GKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred HHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 99999999999999999997754 578999999999999999999999999999998875
No 9
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.1e-97 Score=772.82 Aligned_cols=441 Identities=24% Similarity=0.356 Sum_probs=412.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 115 (484)
T 3ifg_A 37 TGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAA 115 (484)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...++.... ..+ ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 116 ~~l~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 192 (484)
T 3ifg_A 116 SFIEWFAEEGKRVAGD-TLP--TPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192 (484)
T ss_dssp HHHHHHHHHHTTCCEE-EEC--CSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhhcCc-ccc--ccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999999877654321 111 1112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCH
Confidence 999999999 99999999999 457899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.+++++.++|+++.+
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 351 (484)
T 3ifg_A 273 DAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALA 351 (484)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998888 478999999999999999999999865
Q ss_pred -CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 352 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 431 (484)
T 3ifg_A 352 KGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV 431 (484)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHH
T ss_pred CCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 67999999764 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 432 ~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 432 AEALEYGMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCCCSEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCcceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999998543 568899999999999999999999999999999763
No 10
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.9e-96 Score=772.99 Aligned_cols=444 Identities=21% Similarity=0.301 Sum_probs=413.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..
T Consensus 61 tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 140 (517)
T 2o2p_A 61 DGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGM 140 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCC-CceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPS-SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+++.+++++..++++.... .+......+. ..++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 141 ~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ 219 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHH
Confidence 9999999999887765422 1111000122 4688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|++|+|+| +.+.+.+|++|+ |++|+||||+++|+.|++.++ +++||+++|+|||||+||++
T Consensus 220 ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~ 299 (517)
T 2o2p_A 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC
Confidence 999999999999 99999999999 557899999995 999999999999999999999 89999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+
T Consensus 300 dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~ 378 (517)
T 2o2p_A 300 DCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ 378 (517)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999998 47899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHHhcCCCCcEEEEecCCH
Q 011107 316 DDKV-SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
++.+ ++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||+++|||+|.
T Consensus 379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 458 (517)
T 2o2p_A 379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI 458 (517)
T ss_dssp HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence 9865 679999997643 689999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 459 ~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 459 NKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 9999999999999999998654 467899999999999999999999999999999764
No 11
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=3e-96 Score=774.88 Aligned_cols=443 Identities=22% Similarity=0.351 Sum_probs=415.7
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (493)
++++++++.++.+|+++++++|++||..|+.++.++|.++|++++++|+++.++|++++++|+|||..+++. |+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999999999975 9999999
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++..+..+..++..+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 99999998655555443321 124467889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc------ccchhhhcCCCCeEEEc
Q 011107 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFD 235 (493)
Q Consensus 165 l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~------~~~~~~elgG~~p~iV~ 235 (493)
+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.++++ +||+++|+|||||+||+
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~ 297 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD 297 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC
Confidence 99999998 99999999999 667899999996 99999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 314 (493)
+|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++|
T Consensus 298 ~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 298 RDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999985 789999999999999999999
Q ss_pred HHHHhCCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 315 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 315 ~~a~~~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+++.+.|++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 377 ~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 456 (538)
T 3qan_A 377 EIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAH 456 (538)
T ss_dssp HHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred HHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHH
Confidence 99876449999998654 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++|+|+||+...+...+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 457 a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 457 IEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 99999999999999995443434788999999999999 999999999999999998875
No 12
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=9.1e-97 Score=773.06 Aligned_cols=441 Identities=22% Similarity=0.369 Sum_probs=412.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 135 (504)
T 3ek1_A 57 DGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAA 135 (504)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+..... ... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 136 ~~~~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~ 212 (504)
T 3ek1_A 136 SFIEWFAEEAKRVYGD-TIP--APQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212 (504)
T ss_dssp HHHHHHHHHHTTCCEE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccc--cccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 9999998877654321 111 1112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 213 ~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCH
Confidence 999999999 99999999998 567899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.++++++++|+++.+
T Consensus 293 ~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 371 (504)
T 3ek1_A 293 DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVS 371 (504)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998888 478999999999999999999999865
Q ss_pred -CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 -~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++
T Consensus 372 ~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 372 KGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp TTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 6799999975 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 451 ~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 451 EALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 999999999998653 5688999999999999999999999999999998764
No 13
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=5.1e-96 Score=766.58 Aligned_cols=442 Identities=23% Similarity=0.346 Sum_probs=413.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..++
T Consensus 47 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~ 126 (495)
T 1wnd_A 47 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 126 (495)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998633999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++... ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 127 ~~~~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 203 (495)
T 1wnd_A 127 DVFRFFAGAARCLNGL-AAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 203 (495)
T ss_dssp HHHHHHHHHTTCCEEE-CBEE--EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCc-cccC--CCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHH
Confidence 9999999988776432 1111 111235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.+++|+|++|+|+| +.+.+.+|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 204 ~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~ 283 (495)
T 1wnd_A 204 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE 283 (495)
T ss_dssp HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHH
Confidence 99999999999999999999 667899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++.+
T Consensus 284 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 362 (495)
T 1wnd_A 284 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 362 (495)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999985 68999999999999999999999865
Q ss_pred C-CeEEeCCc-cCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 S-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~-~~~~~gg~-~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ +++++||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 363 G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 442 (495)
T 1wnd_A 363 GHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 442 (495)
T ss_dssp SSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHH
Confidence 6 79999997 544689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 443 ~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 443 SARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999998654 457899999999999999999999999999999764
No 14
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=9.8e-96 Score=766.56 Aligned_cols=441 Identities=24% Similarity=0.376 Sum_probs=414.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 45 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 123 (503)
T 1a4s_A 45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW 123 (503)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++.. +..... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 124 ~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 199 (503)
T 1a4s_A 124 QCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199 (503)
T ss_dssp HHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999998887654 222211 2335688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|++|+|+|+.+.+..|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 200 ~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHH
Confidence 999999999 99999999999338899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++++++++.++++++.+
T Consensus 280 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999885 68999999999999999999999865
Q ss_pred CCeEEeCCccC-------CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 320 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 320 ~~~~~~gg~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 67999999764 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 439 ~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 439 RAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999998765 4578999999999999999999999999999998764
No 15
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.3e-95 Score=763.72 Aligned_cols=436 Identities=23% Similarity=0.358 Sum_probs=408.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++..|+..++
T Consensus 50 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 129 (497)
T 3i44_A 50 TEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS 129 (497)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999756999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceee-eecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIV-PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
+.++++++.+..+...... ..+...++. ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 130 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (497)
T 3i44_A 130 SHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204 (497)
T ss_dssp HHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH
T ss_pred HHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHH
Confidence 9999999888765432111 013446778 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD 284 (497)
T 3i44_A 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD 284 (497)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh
Confidence 9999999999 99999999999 668899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||. +++++||++++.++++++++|+++.
T Consensus 285 -~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (497)
T 3i44_A 285 -IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362 (497)
T ss_dssp -TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 7899999999999999999999986
Q ss_pred h-CCeEEeCCc-cCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 319 V-SGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 319 ~-~~~~~~gg~-~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+ ++++++||. .+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 363 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 442 (497)
T 3i44_A 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSK 442 (497)
T ss_dssp HTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 5 679999994 332 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+.++++++++|+|+||. . ...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 443 a~~~a~~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 443 CRRIAAQVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 99999999999999994 2 34678999999999999999999999999999985
No 16
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.4e-96 Score=769.86 Aligned_cols=441 Identities=26% Similarity=0.377 Sum_probs=415.8
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
++++++++.++.+|+++++++|++|| ..|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHH
Confidence 78999999999999999999999999 78999999999999999999999999999999999999999999 4799999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.++++++.++++.. +..+. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEG-QTHNN--IGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCE-EEECC--SCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcC-eeecc--CCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 9999999999887653 22211 11234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dAD 284 (528)
T 3u4j_A 205 IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADAD 284 (528)
T ss_dssp HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSC
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCC
Confidence 9999999999 99999999999 678899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++++++.
T Consensus 285 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 363 (528)
T 3u4j_A 285 LDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGI 363 (528)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999885 6899999999999999999999986
Q ss_pred h-CCeEEeCCccCC--CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 319 V-SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 319 ~-~~~~~~gg~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+ ++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 364 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 443 (528)
T 3u4j_A 364 TSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETAL 443 (528)
T ss_dssp HTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred HCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Confidence 5 669999997644 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 444 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 444 QTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred HHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 999999999999999764 4688999999999999999999999999999999875
No 17
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=6.6e-96 Score=767.50 Aligned_cols=441 Identities=24% Similarity=0.361 Sum_probs=412.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 114 (505)
T 3prl_A 36 SGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTA 114 (505)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 4999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccC---CCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTF---PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+.++++++.++++.... .+...... +...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 115 ~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ 193 (505)
T 3prl_A 115 DIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSL 193 (505)
T ss_dssp HHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHH
T ss_pred HHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChH
Confidence 99999999988765422 11110000 234678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
++..|++++.++ +|+|++|+|+| +.+.++.|++|+ +|+|+||||+++|+.|++.++ +||+++|+|||||+||++|
T Consensus 194 ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~d 271 (505)
T 3prl_A 194 SGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDD 271 (505)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCC
Confidence 999999999998 99999999999 567899999995 999999999999999999887 8999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
||+|.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|||.+++++||++++.+++++.++++++
T Consensus 272 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a 350 (505)
T 3prl_A 272 ADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDA 350 (505)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999988888999999999999999999998
Q ss_pred Hh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 318 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 351 ~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 428 (505)
T 3prl_A 351 LENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN 428 (505)
T ss_dssp HHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHH
T ss_pred HHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 65 6699999974 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 429 ~~~~l~aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 429 IGKHLEVGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp HHHTSCSSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHCCeeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 999999999999997653 4688999999999999999999999999999998875
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.6e-96 Score=773.40 Aligned_cols=446 Identities=25% Similarity=0.333 Sum_probs=412.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ |+..++
T Consensus 39 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~ 115 (517)
T 3r31_A 39 TGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPT 115 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999987 999999
Q ss_pred HHHHHHHHHHHh---hcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 84 TSIKSALKELKH---WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 84 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+.+++++...+. +...+..+. ..+. .+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 116 ~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 191 (517)
T 3r31_A 116 SGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191 (517)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCS
T ss_pred HHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHH
Confidence 999999988876 232222221 1233 788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
++..+++++.++ +|+|+||+|+|+.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++||
T Consensus 192 t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dA 271 (517)
T 3r31_A 192 GALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDA 271 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCC
Confidence 999999999999 99999999999778899999996 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++|+++
T Consensus 272 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a 350 (517)
T 3r31_A 272 DIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG 350 (517)
T ss_dssp CHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 789999999999999999999998
Q ss_pred Hh-CCeEEeCCccC----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 318 KV-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 318 ~~-~~~~~~gg~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 430 (517)
T 3r31_A 351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430 (517)
T ss_dssp HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence 65 77999999312 26899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCc
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 459 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~ 459 (493)
+++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++....+.++
T Consensus 431 ~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 495 (517)
T 3r31_A 431 RAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495 (517)
T ss_dssp HHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC------
T ss_pred HHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCCc
Confidence 999999999999999999653 56889999999999999999999999999999998764433333
No 19
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1e-95 Score=765.38 Aligned_cols=441 Identities=24% Similarity=0.346 Sum_probs=414.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+.
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~ 124 (501)
T 1bxs_A 45 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG 124 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 5789999999999999999999999999 8999999999999999999999999999999999999999987657999
Q ss_pred HHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.+++.+++++..++++.+.. .+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 125 ~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 200 (501)
T 1bxs_A 125 GCIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200 (501)
T ss_dssp HHHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHhhCCe-eec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHH
Confidence 99999999999988875431 111 12334688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|++|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 201 t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~ 280 (501)
T 1bxs_A 201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 280 (501)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC
Confidence 999999999999 99999999999 667899999996 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|||. +++++||++++.+++++.++|+
T Consensus 281 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 359 (501)
T 1bxs_A 281 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE 359 (501)
T ss_dssp TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999985 6899999999999999999999
Q ss_pred HHHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 360 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 439 (501)
T 1bxs_A 360 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 439 (501)
T ss_dssp HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHH
Confidence 9865 67999999763 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|.++
T Consensus 440 a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 440 AITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999998654 357899999999999999999999999999999875
No 20
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=6.1e-96 Score=767.73 Aligned_cols=442 Identities=21% Similarity=0.334 Sum_probs=414.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 115 (497)
T 3k2w_A 37 TGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTA 115 (497)
T ss_dssp SCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++.... .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 116 ~~~~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (497)
T 3k2w_A 116 TFIDYGCDNALTIEGDI-LPS--DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192 (497)
T ss_dssp HHHHHHHHTTTTCCEEE-EEC--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999999888765432 111 122445788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCH
Confidence 999999999 99999999999 667899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++++++.+
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 351 (497)
T 3k2w_A 273 DKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIK 351 (497)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999984 78999999999999999999999865
Q ss_pred -CCeEEeCCcc--C-C--CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 -SGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 -~~~~~~gg~~--~-~--~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||.. . . .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 352 ~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 431 (497)
T 3k2w_A 352 QGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431 (497)
T ss_dssp HHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHH
T ss_pred CCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Confidence 6799999973 2 2 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|++|+++||+.|+|.++.
T Consensus 432 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 432 INQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999999999998764 488999999999999999999999999999998875
No 21
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=6.4e-96 Score=766.71 Aligned_cols=441 Identities=24% Similarity=0.351 Sum_probs=414.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+.
T Consensus 44 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~ 123 (500)
T 1o04_A 44 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD 123 (500)
T ss_dssp TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5789999999999999999999999999 8999999999999999999999999999999999999999987656999
Q ss_pred HHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.+++.++++++.++++.... .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 124 ~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 199 (500)
T 1o04_A 124 MVLKCLRYYAGWADKYHGKT-IPI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199 (500)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHHhhCcc-eec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence 99999999999888775431 111 12334678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|+||+|+| +.+.+..|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 200 t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~ 279 (500)
T 1o04_A 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 279 (500)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC
Confidence 999999999999 99999999999 677899999996 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|||. +++++||++++.+++++.++++
T Consensus 280 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 358 (500)
T 1o04_A 280 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYIN 358 (500)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999985 6899999999999999999999
Q ss_pred HHHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++.+ ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 359 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 438 (500)
T 1o04_A 359 TGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 438 (500)
T ss_dssp HHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 9865 67999999764 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|.++
T Consensus 439 a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 439 ANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp HHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 99999999999999998764 457899999999999999999999999999999875
No 22
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-95 Score=764.81 Aligned_cols=440 Identities=26% Similarity=0.368 Sum_probs=413.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..
T Consensus 33 tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 112 (495)
T 3b4w_A 33 TGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG 112 (495)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.++++++.++++.... .+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 113 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 188 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTE-TRT---GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEE-EEE---ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCc-ccC---CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHH
Confidence 9999999998888765422 111 112356889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
+..+++++.++ +|+|++|+|+|+.+.+.+|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 189 ~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dAD 268 (495)
T 3b4w_A 189 ANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVD 268 (495)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCC
Confidence 99999999999 99999999999777899999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++++++++.++++++.
T Consensus 269 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 347 (495)
T 3b4w_A 269 LAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGI 347 (495)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999998 47899999999999999999999986
Q ss_pred h-CCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 319 V-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 319 ~-~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+ ++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 348 ~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 427 (495)
T 3b4w_A 348 EEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG 427 (495)
T ss_dssp HTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHH
T ss_pred hCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence 5 679999997643 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++|+|+||++. ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 428 ~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 428 IKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp HHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred HHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 999999999999999864 457899999999999999999999999999999875
No 23
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.7e-95 Score=763.18 Aligned_cols=444 Identities=22% Similarity=0.331 Sum_probs=415.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 61 t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 139 (516)
T 1uzb_A 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++..+.... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 140 DFIEYYARAALRYRYPAVEV--VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc--cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 99999999998876543210 1112335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh------ccccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~~~elgG~~p~iV 234 (493)
.+++++.++ +|+|++|+|+| +.+.+.+|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999999 99999999999 677899999996 999999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i 314 (493)
++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|++++++||++++.+++++.+++
T Consensus 298 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i 376 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999887789999999999999999999
Q ss_pred HHHHhCCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 315 DDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 315 ~~a~~~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+++.+.|++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 377 ~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 456 (516)
T 1uzb_A 377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456 (516)
T ss_dssp HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 998776699999976 3468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++||+.|+|+++
T Consensus 457 a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999999999987665566789999999999995 7899999999999999764
No 24
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-95 Score=765.77 Aligned_cols=443 Identities=20% Similarity=0.276 Sum_probs=412.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.++.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 129 (521)
T 4e4g_A 51 TGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGL 129 (521)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.. ....... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~~-~~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~ 206 (521)
T 4e4g_A 130 EVCEFVIGIPHLQ-KSEFTEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206 (521)
T ss_dssp HHHHHHHTHHHHT-CEEEEEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHH
T ss_pred HHHHHHHHHHHHh-cCccccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 9999998765543 2221111 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|+||+|+|+.+.+.+|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~ 286 (521)
T 4e4g_A 207 RLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLD 286 (521)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHH
Confidence 999999999 99999999999888889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
.|++.+++++| .|+||.|++++|||||++ +||+|+++|++++++++.|+| ++++++||++++++++++.++|+++.+
T Consensus 287 ~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (521)
T 4e4g_A 287 QAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE 365 (521)
T ss_dssp HHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999 999999999999999998888 578999999999999999999999865
Q ss_pred -CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 -SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 -~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA 445 (521)
T ss_dssp HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence 67999999642 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--CcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++|+|+||+++. ...+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 446 a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 446 ARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp HHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred HHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999999999999998753 34578999999999999 789999999999999998764
No 25
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3e-95 Score=759.12 Aligned_cols=435 Identities=28% Similarity=0.426 Sum_probs=409.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 21 tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 99 (486)
T 3pqa_A 21 SLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSI 99 (486)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++.... .+. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~a~~~~~~~~~~-~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 174 (486)
T 3pqa_A 100 GTFKLAAFYVKEHRDEV-IPS----DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174 (486)
T ss_dssp HHHHHHHHHHHHCCEEE-ECC----TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCce-ecC----CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHH
Confidence 99999999998875422 111 1446788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-----cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 164 LLAKLVGEY-----MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 164 ~l~~~l~~a-----lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.++ +||+++|+|||||+||++
T Consensus 175 ~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~ 252 (486)
T 3pqa_A 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK 252 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC
Confidence 999999998 99999999999 456689999995 999999999999999998877 899999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++++++++.++++
T Consensus 253 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~ 331 (486)
T 3pqa_A 253 DADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVE 331 (486)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999998 47899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 316 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++.. ++++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||+++|||+|.+++
T Consensus 332 ~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a 407 (486)
T 3pqa_A 332 KAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKS 407 (486)
T ss_dssp HHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHH
T ss_pred HHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHH
Confidence 9865 6799999965 5899999999 9999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 408 ~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 408 LKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999997653 3458999999999999999999999999999998875
No 26
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.7e-95 Score=763.48 Aligned_cols=441 Identities=23% Similarity=0.333 Sum_probs=413.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 129 (515)
T 2d4e_A 51 TNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAA 129 (515)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++... ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 130 ~~l~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 206 (515)
T 2d4e_A 130 ENFAFYAEYAEHAMED-RTFP--VDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206 (515)
T ss_dssp HHHHHHHTTGGGTTCE-EECC--BTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-cccc--CCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHH
Confidence 9999999888776532 1111 012335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCH
Confidence 999999999 99999999999 467899999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||++++++++++.++|+++.+
T Consensus 287 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (515)
T 2d4e_A 287 ERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKR 365 (515)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 67999999999999999999999865
Q ss_pred -CCeEEeCCccCC---------CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecC
Q 011107 320 -SGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (493)
Q Consensus 320 -~~~~~~gg~~~~---------~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 389 (493)
++++++||..+. .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 366 ~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 444 (515)
T 2d4e_A 366 EGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444 (515)
T ss_dssp TTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred CCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECC
Confidence 679999997643 589999999999 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 390 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 390 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 445 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 445 DLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp BHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 999999999999999999998654 5678999999999999999999999999999998864
No 27
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=4.3e-95 Score=759.27 Aligned_cols=441 Identities=23% Similarity=0.359 Sum_probs=412.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (479)
T 2imp_A 31 TEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTA 109 (479)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++.... .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 110 ~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 186 (479)
T 2imp_A 110 DYIDYMAEWARRYEGEI-IQS--DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186 (479)
T ss_dssp HHHHHHHTTTTTCCCEE-ECC--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhCCc-ccc--CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999998777665432 111 112335688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+|+ .+.++.|++|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCH
Confidence 999999999 999999999994 56799999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC--CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~--~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++++++.
T Consensus 267 ~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~ 345 (479)
T 2imp_A 267 ELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 345 (479)
T ss_dssp HHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 5899999999999999999999986
Q ss_pred h-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 319 V-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 319 ~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~ 425 (479)
T 2imp_A 346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425 (479)
T ss_dssp HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 5 6799999975 3358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 426 ~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 426 AIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999987654 57899999999999999999999999999999764
No 28
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=7.5e-95 Score=755.28 Aligned_cols=441 Identities=22% Similarity=0.358 Sum_probs=416.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 94 (462)
T 3etf_A 16 TGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSA 94 (462)
T ss_dssp TCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++.....+...... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 170 (462)
T 3etf_A 95 ALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQ 170 (462)
T ss_dssp HHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 9999999988877654311 112346788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
++++++.++ +|+|++|+++|+.+.+..|++|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 171 ~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 171 MIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHH
Confidence 999999998 99999999999888899999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++++++++.++++++.+
T Consensus 251 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 329 (462)
T 3etf_A 251 LAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAE 329 (462)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999884 78999999999999999999999865
Q ss_pred CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 ~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 330 ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~ 409 (462)
T 3etf_A 330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMA 409 (462)
T ss_dssp TCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHH
T ss_pred CCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 6799999975 357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 410 ~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 410 ARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999999999764 4688999999999999999999999999999998764
No 29
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=7.2e-95 Score=757.92 Aligned_cols=441 Identities=22% Similarity=0.361 Sum_probs=412.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 34 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 112 (481)
T 3jz4_A 34 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA 112 (481)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++....+.... ..+ ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 113 ~~~~~~a~~~~~~~~~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 189 (481)
T 3jz4_A 113 SFIEWFAEEGKRIYGD-TIP--GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189 (481)
T ss_dssp HHHHHHHHHGGGCCEE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccc--ccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999988876654321 111 1112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 190 ~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCH
Confidence 999999999 99999999999 678899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.++++++++++++.+
T Consensus 270 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 348 (481)
T 3jz4_A 270 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE 348 (481)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998888 478999999999999999999999865
Q ss_pred -CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 349 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 428 (481)
T 3jz4_A 349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 428 (481)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHH
T ss_pred CCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 6799999976 34679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 429 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 429 GEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999998764 467899999999999999999999999999999865
No 30
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=9.6e-95 Score=755.69 Aligned_cols=450 Identities=23% Similarity=0.332 Sum_probs=416.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+|++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||+..+. .|+..++
T Consensus 15 tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~--~ev~~~~ 92 (474)
T 4h7n_A 15 TGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV--LEIDSFL 92 (474)
T ss_dssp TCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH--HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999986543 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++....++......... .........++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 93 ASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 9999999888887664433221 11234567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
.+.+++.++ +|+|++|+++|+.+.+..|+.| +++|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~ 249 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLEL 249 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHH
T ss_pred HHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHH
Confidence 999999999 9999999999998999999977 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-C
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-S 320 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~ 320 (493)
|++.+++++| +|+||.|++++|||||++++|+|++++.++.++++.|+|. +++++||++++.+++++.++++++.+ +
T Consensus 250 aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 328 (474)
T 4h7n_A 250 ATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKG 328 (474)
T ss_dssp HHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhC
Confidence 9999999999 9999999999999999999999999999999999999985 68899999999999999999999865 5
Q ss_pred CeEEeCCccC--CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 321 GKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 321 ~~~~~gg~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++.||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 329 a~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 408 (474)
T 4h7n_A 329 AVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVA 408 (474)
T ss_dssp CEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHH
T ss_pred ceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 6888888763 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEecCCCCCCc
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPV 459 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~~~~~~~~ 459 (493)
+++++|+|+||+++.+...+..||||+|.||+| +++|.+|+++|++.|+|+++....+.++
T Consensus 409 ~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 409 RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTT
T ss_pred HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCC
Confidence 999999999999887777789999999999998 7899999999999999999864444443
No 31
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.7e-94 Score=754.78 Aligned_cols=442 Identities=25% Similarity=0.344 Sum_probs=414.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||..|+.++.++|.++|++++++|+++.++|++++++|+|||..+++..|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 110 (490)
T 2ve5_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999745999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++.+.. ...+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 111 ~~~~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~ 186 (490)
T 2ve5_A 111 DVLEYYAGLVPAIEG-EQIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCE-EEEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcC-ccccC---CCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999988876532 21111 13445788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHH-hccccchhhhcCCCCeEEEcCCCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAA-AKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a-~~~~~~~~~elgG~~p~iV~~daD 239 (493)
.|++++.++ +|+|+||+++| +.+.++.|++|+ ||+|+||||+++|+.|++.+ ++++||+++|+|||||+||++|||
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dAD 266 (490)
T 2ve5_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCC
Confidence 999999999 99999999999 678899999996 99999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.
T Consensus 267 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~ 345 (490)
T 2ve5_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999998 47889999999999999999999986
Q ss_pred h-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 319 V-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 319 ~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 346 ~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 425 (490)
T 2ve5_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred HCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 5 67999999762 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 426 ~a~~~~~~l~aG~v~vN~~~~--~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 426 RAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHhCCcceEEECCCCC--CCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 999999999999999999764 4688999999999999999999999999999998865
No 32
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.1e-94 Score=756.48 Aligned_cols=441 Identities=24% Similarity=0.380 Sum_probs=412.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 35 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 113 (487)
T 2w8n_A 35 SGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSA 113 (487)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++.. +..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 190 (487)
T 2w8n_A 114 FFLEWFSEEARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190 (487)
T ss_dssp HHHHHHHHHGGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999988876432 22211 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEe---C-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVE---G-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~---g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+++++.++ +|+|++|+|+ | +.+.++.|++|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus 191 ~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCC
Confidence 999999999 9999999999 8 567899999996 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHh-hcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++ ++.|+|. +++++||++++.+++++.++++
T Consensus 271 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~ 349 (487)
T 2w8n_A 271 ANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349 (487)
T ss_dssp SCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999 9888884 7899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCCCCc-eeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~~g~-~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++.+ ++++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 350 ~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 429 (487)
T 2w8n_A 350 DAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429 (487)
T ss_dssp HHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred HHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence 9865 669999997654688 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 430 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 430 IWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999999999999987654 46799999999999999999999999999999764
No 33
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.5e-94 Score=756.30 Aligned_cols=442 Identities=23% Similarity=0.366 Sum_probs=395.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..+++. |+..++
T Consensus 37 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~ 115 (508)
T 3r64_A 37 DDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAG 115 (508)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999974 999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH-
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~- 162 (493)
+.+++++...+.... ..+.. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 116 ~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 116 NITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 999998876654322 11111 01234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc--cccchhhhcCCCCeEEEcCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~--~~~~~~~elgG~~p~iV~~d 237 (493)
.++++++.++ +|+|++|+++| +.+.+++|++|+ +|+|+||||+++|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 9999999999 99999999999 478899999995 9999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++++++++++++++
T Consensus 273 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 351 (508)
T 3r64_A 273 ADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIEL 351 (508)
T ss_dssp SCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999985 78999999999999999999999
Q ss_pred HHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 317 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 317 a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+++ ++++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 352 a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 429 (508)
T 3r64_A 352 AKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429 (508)
T ss_dssp HHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred HHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence 976 5699999976 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecC
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~ 453 (493)
++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++++++||+.|+|+++..
T Consensus 430 ~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 430 QFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp HHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred HHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 9999999999999998754 46889999999999999999999999999999998763
No 34
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=4.2e-94 Score=754.35 Aligned_cols=442 Identities=17% Similarity=0.212 Sum_probs=408.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++. .|+..++
T Consensus 46 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 124 (500)
T 2j6l_A 46 NNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYV 124 (500)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999985 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++... ..+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 125 ~~~~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 201 (500)
T 2j6l_A 125 DICDYAVGLSRMIGGP-ILPS--ERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201 (500)
T ss_dssp HHHHHHHHHTTTCCCB-EECC--SSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCc-cccc--cCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHH
Confidence 9999999887665432 1111 111223567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh----h-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~----a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+++++.+ + +|+|++|+|+|+.+.+..|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus 202 ~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~d 281 (500)
T 2j6l_A 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFED 281 (500)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCC
Confidence 99998775 4 99999999999777899999995 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++++++++
T Consensus 282 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 360 (500)
T 2j6l_A 282 ADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE 360 (500)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999888885 68999999999999999999999
Q ss_pred HHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 440 (500)
T 2j6l_A 361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI 440 (500)
T ss_dssp HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 865 6799999976 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFV--ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~--~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++ +++++|+|+||++.. ...+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 441 ~~~~~~~~~~~G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 441 FRWLGPKGSDCGIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp HHHHSTTSCCSSEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred HHHHhhccCCeeEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999 779999999998654 2456899999999999999999999999999999864
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.7e-94 Score=756.77 Aligned_cols=449 Identities=20% Similarity=0.309 Sum_probs=413.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..+
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~ 119 (501)
T 1uxt_A 41 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 119 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccC--CCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTF--PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
++.+++++..++++.. +..+...... +...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 120 ~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 120 VDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 9999999888877633 2222110011 125688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
++..+++++.++ +|+|++|+|+|+.+.+..|++|+ +|+|+||||+++|+.|++.++ +||+++|+|||||+||++||
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 276 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDA 276 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCC
Confidence 999999999999 99999999999558899999995 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|||. +++++||++++.++++++++++++
T Consensus 277 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a 355 (501)
T 1uxt_A 277 DLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDA 355 (501)
T ss_dssp CHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 789999999999999999999998
Q ss_pred Hh-CCeEEeCCccCCCC-ceeeceEecCCC---CCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 318 KV-SGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g-~~~~Ptvl~~v~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
.+ ++++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 356 ~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 433 (501)
T 1uxt_A 356 VEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433 (501)
T ss_dssp HHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHH
T ss_pred HHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHH
Confidence 65 5699999976 57 999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccC
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY 461 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~ 461 (493)
+++++++++++|+|+||+++ +...+.+||||+|.||+|+++|.+++++||+.|+|+++. ....+++|
T Consensus 434 ~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~-~~~~~~~~ 500 (501)
T 1uxt_A 434 KIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY-KGKGVWKY 500 (501)
T ss_dssp HHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC-TTSSSSSC
T ss_pred HHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec-CCCccccc
Confidence 99999999999999999874 335688999999999999999999999999999998874 23344444
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-93 Score=750.34 Aligned_cols=442 Identities=20% Similarity=0.319 Sum_probs=390.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++. |+..++
T Consensus 31 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~ 109 (485)
T 4dng_A 31 DQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTI 109 (485)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999975 999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH-
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~- 162 (493)
+.+++++...+... ....+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 110 ~~~~~~a~~~~~~~-~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 110 AILDEAMTYTGELG-GVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHGGGCS-CEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHhC-Ceecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 99999998876543 2222111 01234568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
.++.+++.++ +|+|+||+++|+. +.+++|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dAD 267 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD 267 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCC
Confidence 9999999999 9999999999955 5889999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++++++.
T Consensus 268 l~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~ 346 (485)
T 4dng_A 268 VDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346 (485)
T ss_dssp HHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999885 7899999999999999999999986
Q ss_pred h-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 319 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 319 ~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 347 ~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~ 424 (485)
T 4dng_A 347 TDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424 (485)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHH
T ss_pred HCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 5 6799999976 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 425 ~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 425 ALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999997754 5688999999999999999999999999999998875
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=7.8e-94 Score=748.98 Aligned_cols=437 Identities=23% Similarity=0.361 Sum_probs=409.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 27 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 105 (475)
T 1euh_A 27 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA 105 (475)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCC----CCc-eeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCc
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFP----SSA-EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~ 158 (493)
+.++++++.++++.... .+.. ..+ ... ++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 106 ~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~t 182 (475)
T 1euh_A 106 EIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182 (475)
T ss_dssp HHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTT
T ss_pred HHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcC
Confidence 99999999888765432 1111 112 345 889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEc
Q 011107 159 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (493)
Q Consensus 159 ~~~~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~ 235 (493)
|.++..+++++.++ +|+|++|+|+|+ .+.++.|++|+ +|+|+||||+++|+.|++.++ +||+++|+|||||+||+
T Consensus 183 p~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC
Confidence 99999999999999 999999999995 56789999996 999999999999999999877 89999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
+|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|.+++++||++++.+++++.++++
T Consensus 261 ~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~ 339 (475)
T 1euh_A 261 EDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLIN 339 (475)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999966899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 316 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 340 ~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~ 417 (475)
T 1euh_A 340 DANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417 (475)
T ss_dssp HHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHH
T ss_pred HHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHH
Confidence 9865 6699999875 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcC-CCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~-~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++|+|+||+ +..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 418 ~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 418 FGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999998 5543 57899999999999999999999999999999875
No 38
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-93 Score=747.74 Aligned_cols=434 Identities=25% Similarity=0.406 Sum_probs=387.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++..+.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..++
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 111 (478)
T 3ty7_A 32 TEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGL 111 (478)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999556999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.+.++.... .....++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 112 ~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (478)
T 3ty7_A 112 NHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV 183 (478)
T ss_dssp HHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 99999999888765422 1235688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+++| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 184 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 263 (478)
T 3ty7_A 184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDI 263 (478)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCH
Confidence 999999999 99999999999 668899999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||+++||+|+++|.+++++++.|+|. +++++||+++++++++++++++++.+
T Consensus 264 ~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 342 (478)
T 3ty7_A 264 KEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIE 342 (478)
T ss_dssp HHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 78999999999999999999999854
Q ss_pred -CCeEEeCCcc-C---CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 -SGKIVHGGER-D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 -~~~~~~gg~~-~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||.. + ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 343 ~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a 422 (478)
T 3ty7_A 343 EGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETL 422 (478)
T ss_dssp HTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 7799999943 2 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+++++++++|+|+||+ . ...+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 423 ~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 423 HKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHHHHHSCSSEEEETT-C--C----------------------CCGGGEEEEEEE
T ss_pred HHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999998 3 24678999999999999999999999999999986
No 39
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.3e-93 Score=743.56 Aligned_cols=442 Identities=21% Similarity=0.293 Sum_probs=409.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 30 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 108 (486)
T 1t90_A 30 TKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGI 108 (486)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.. ..+..... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 109 ~~~~~~a~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 185 (486)
T 1t90_A 109 ENVEFAAGAPSLM-MGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185 (486)
T ss_dssp HHHHHHTTHHHHH-CEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHh-cCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999988654443 22222111 12335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|++|+|+|+.+.+..|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 186 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~ 265 (486)
T 1t90_A 186 KLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE 265 (486)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHH
Confidence 999999999 99999999999878899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCE-EEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 242 VACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
.|++.+++++| .|+||.|++++| ||||++ +|+|+++|++++++++.|+| ++++++||++++.+++++.++++++.+
T Consensus 266 ~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 343 (486)
T 1t90_A 266 DTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE 343 (486)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999 999999999999 999999 99999999999999998888 478999999999999999999999855
Q ss_pred -CCeEEeCCccC--CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 320 -SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 320 -~~~~~~gg~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~ 423 (486)
T 1t90_A 344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY 423 (486)
T ss_dssp HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 77999999742 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--CcchHHHHHHhhhccEEeEec
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++|+|+||++. +...+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 424 ~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 424 FRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred HHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999854 334578999999999999 899999999999999998764
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.1e-92 Score=749.22 Aligned_cols=454 Identities=19% Similarity=0.237 Sum_probs=414.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhc-HHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNER-EPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
+++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++ +++|+++++.|+|||..+++..++..+
T Consensus 87 ~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~ 166 (563)
T 4e3x_A 87 HAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAEL 166 (563)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHH
Confidence 3789999999999999999999999999999999999999999999999998 999999999999999999975349999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.+++++..++++...+.... ......+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++
T Consensus 167 ~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa 242 (563)
T 4e3x_A 167 IDFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLAS 242 (563)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHH
Confidence 9999999999988765432221 1122345677888999999999999999999999999 69999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccc------hhhhcCCCCeEE
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVV 233 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~------~~~elgG~~p~i 233 (493)
..+++++.++ +|+|+||+|+|+ .+.++.|++|+ |++|+||||+.+|+.|++.+++++|| +++|+|||||+|
T Consensus 243 ~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~I 322 (563)
T 4e3x_A 243 YAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHF 322 (563)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEE
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCcee
Confidence 9999999999 999999999995 56789999995 99999999999999999999998885 999999999999
Q ss_pred EcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-C-CCCcccccCCHHHHHHHH
Q 011107 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-L-ESKDLSRIVNSNHFARLS 311 (493)
Q Consensus 234 V~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~-~~~~~gpl~~~~~~~~~~ 311 (493)
|++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+| . +++++||++++.+++++.
T Consensus 323 V~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~ 401 (563)
T 4e3x_A 323 VHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIK 401 (563)
T ss_dssp ECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999988 4 789999999999999999
Q ss_pred HHHHHHHh--CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHH-hcCCCCcEEE
Q 011107 312 KLLDDDKV--SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAY 385 (493)
Q Consensus 312 ~~i~~a~~--~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~ 385 (493)
++|+++++ ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++
T Consensus 402 ~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~ 481 (563)
T 4e3x_A 402 KWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGA 481 (563)
T ss_dssp HHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEE
T ss_pred HHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEE
Confidence 99999973 56999999764 3689999999999999999999999999999999997 79999999 7899999999
Q ss_pred EecCCHHHHHHHHhhcc--cceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEecCCCCCCccCC
Q 011107 386 LFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYP 462 (493)
Q Consensus 386 v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~~ 462 (493)
|||+|.+++++++++++ +|+|+||+.+++...+.+||||+|.||+| +++|++++++|++.|+|..+ |..+.+++|
T Consensus 482 V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~y- 559 (563)
T 4e3x_A 482 VFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRY- 559 (563)
T ss_dssp EECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSC-
T ss_pred EEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccC-
Confidence 99999999999999975 99999999776656788999999999998 89999999999999999876 433444454
Q ss_pred CC
Q 011107 463 PY 464 (493)
Q Consensus 463 p~ 464 (493)
||
T Consensus 560 p~ 561 (563)
T 4e3x_A 560 SY 561 (563)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.8e-90 Score=721.89 Aligned_cols=435 Identities=21% Similarity=0.292 Sum_probs=404.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 29 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 107 (490)
T 3ju8_A 29 GQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMV 107 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+....... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (490)
T 3ju8_A 108 NKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183 (490)
T ss_dssp HHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHH
Confidence 99999998887765432211 12334567799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccch-hhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~-~~elgG~~p~iV~~daDl 240 (493)
++++++.++ +|+|++|+++|+.+.+++|++|+ +|+|+||||+++|+.|++.+++++||+ ++|+|||||+||++|||+
T Consensus 184 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCH
Confidence 999999999 99999999999888999999996 999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcc-hHHHHHHHHHHHHhhcCCC-C-CCCCcccccCCHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKN-P-LESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~-~-~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|.|++.+++++| +|+||.|++++|+|||+++ +|+|+++|++++++++.|+ | ++++++||++++++++++.++++++
T Consensus 264 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a 342 (490)
T 3ju8_A 264 DAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHL 342 (490)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999996 9999999999999999888 6 5789999999999999999999998
Q ss_pred Hh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 318 KV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 318 ~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
.+ ++++++||.. +..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 343 ~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~ 421 (490)
T 3ju8_A 343 IGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFE 421 (490)
T ss_dssp HHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred HHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHH
Confidence 65 6799999865 3478999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||++..+ ..+.+||||+|.||++ ++++|++.|+|++..
T Consensus 422 ~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 422 QFLVESRAGIVNWNKQLTG-AASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHHHCCSSEEEESSCSSC-CCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHHHhcCcceEEECCCcCC-CCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999997653 4578999999999975 578999999998764
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=5.6e-90 Score=765.85 Aligned_cols=444 Identities=18% Similarity=0.268 Sum_probs=416.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++|+++|++||..|+.+|.++|.++|++++++|++++++|+++++.|+|||..++. .|+..++
T Consensus 555 ~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai 633 (1026)
T 4f9i_A 555 PSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAI 633 (1026)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++.+........ ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 634 d~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~ 710 (1026)
T 4f9i_A 634 DFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGW 710 (1026)
T ss_dssp HHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHH
Confidence 999999999988765432211 12345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh------ccccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~~~elgG~~p~iV 234 (493)
.+++++.++ +|+|+||+|+| +.+.+..|++|+ |++|+||||+++|+.|++.++ +++||+++|+|||||+||
T Consensus 711 ~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV 790 (1026)
T 4f9i_A 711 HLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIII 790 (1026)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEE
Confidence 999999999 99999999999 557899999996 999999999999999999988 478999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 313 (493)
++|||+|.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++
T Consensus 791 ~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~ 869 (1026)
T 4f9i_A 791 DDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEY 869 (1026)
T ss_dssp CTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999985 78999999999999999999
Q ss_pred HHHHHhCCeEEeCCccCCC-CceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 314 LDDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~~-g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
|+++++.|++++||..+.. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 870 i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~ 949 (1026)
T 4f9i_A 870 AEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPE 949 (1026)
T ss_dssp HHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHH
T ss_pred HHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHH
Confidence 9999776699999976554 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|..+.
T Consensus 950 ~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 950 HLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999999999998776667889999999999995 68999999999999998875
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.1e-88 Score=719.44 Aligned_cols=443 Identities=16% Similarity=0.221 Sum_probs=396.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHH-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++..+ +|+++++++|++| |+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+
T Consensus 31 tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 108 (534)
T 2y53_A 31 TGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGG 108 (534)
T ss_dssp TCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 578899999987 8999999999999 5999999999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcCCccc--cc--ccccCCC-Cceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCC
Q 011107 83 KTSIKSALKELKHWMTPEKA--KT--SITTFPS-SAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~ 156 (493)
++.+++++...+++...... +. +....+. ..++.++|+ |||++|+|||||+.++++++++||++||+||+|||+
T Consensus 109 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 109 IFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999887665321110 00 1111111 346789997 999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC--CCCeEEEeCCHHHHHHHHHHHh--ccccchhhhcCCCC
Q 011107 157 VAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKS 230 (493)
Q Consensus 157 ~~~~~~~~l~~~l~~a--lP~g~v~vv~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~i~~~a~--~~~~~~~~elgG~~ 230 (493)
.+|+++..+++++.++ +|+|+||+|+|+.. .+.++ .+|+|+||||+.+|+.|++.++ +++||+++|+||||
T Consensus 189 ~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~ 265 (534)
T 2y53_A 189 ATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265 (534)
T ss_dssp GGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCE
T ss_pred cchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCC
Confidence 9999999999999997 59999999998532 24444 4999999999999999998775 88999999999999
Q ss_pred eEEEcCCC-----CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCH
Q 011107 231 PVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNS 304 (493)
Q Consensus 231 p~iV~~da-----Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~ 304 (493)
|+||++|| |+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||. +++++||++++
T Consensus 266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 266 SAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp EEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred eEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 99999999 99999999999999 9999999999999999999999999999999999999985 68999999999
Q ss_pred HHHHHHHHHHHHHHhCCeEEeCCccC-------CCCceeeceEecCCCCC--CcccccccccceeeeEeeC---CH----
Q 011107 305 NHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI---- 368 (493)
Q Consensus 305 ~~~~~~~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptvl~~v~~~--~~i~~eE~fgPvl~v~~~~---~~---- 368 (493)
.++++++++|+++.+++++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+
T Consensus 345 ~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~ 424 (534)
T 2y53_A 345 EQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424 (534)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CT
T ss_pred HHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCC
Confidence 99999999999986678999999642 35899999999999987 6899999999999999999 99
Q ss_pred -HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ccceEEEcCCCcc-------cCCCCCCccCCCCCCCCCc-chHH
Q 011107 369 -EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAY-HGKF 437 (493)
Q Consensus 369 -~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~-------~~~~~~p~gG~~~SG~G~~-~g~~ 437 (493)
||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++... ...+.+||||+|.||+|++ +|.+
T Consensus 425 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~ 504 (534)
T 2y53_A 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLR 504 (534)
T ss_dssp THHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGG
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHH
Confidence 999999999999999999999999999999999 8999999986421 2357899999999999999 6999
Q ss_pred HHHHhhhccEEeEec
Q 011107 438 SFDVFSHKKAVLSRG 452 (493)
Q Consensus 438 ~~~~~t~~k~v~~~~ 452 (493)
++++|++.|+|...+
T Consensus 505 ~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 505 ALAFYHRRSAIQAAS 519 (534)
T ss_dssp GGGGGEEEEEEEEEH
T ss_pred HHHHHhhhheeecCH
Confidence 999999999987654
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=6.1e-87 Score=739.96 Aligned_cols=434 Identities=21% Similarity=0.305 Sum_probs=404.1
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 011107 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (493)
Q Consensus 11 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~ 90 (493)
++.++.+++++++++|++||..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++. .|+..+++.+++++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999996 69999999999999
Q ss_pred HHHHhhcCCcc-cccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 011107 91 KELKHWMTPEK-AKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (493)
Q Consensus 91 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l 169 (493)
...+.+..... .+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~---~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPG---PTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccC---CCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 99887654321 111 12446788999999999999999999999999999999999999999999999999999999
Q ss_pred hhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc---ccchhhhcCCCCeEEEcCCCCHHHHH
Q 011107 170 GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVAC 244 (493)
Q Consensus 170 ~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~p~iV~~daDl~~Aa 244 (493)
.++ +|+|+||+|+|+.+.+..|+.|+ |++|+||||+++|+.|++.++++ +||+++|+|||||+||++|||+|.|+
T Consensus 700 ~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 700 HEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999 99999999999655599999996 99999999999999999998864 79999999999999999999999999
Q ss_pred HHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHhCCeE
Q 011107 245 RRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKI 323 (493)
Q Consensus 245 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~ 323 (493)
+.+++|+| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+++.++|++
T Consensus 780 ~~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v 858 (1001)
T 3haz_A 780 DDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL 858 (1001)
T ss_dssp HHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE
Confidence 99999999 9999999999999999999999999999999999999984 789999999999999999999998776788
Q ss_pred EeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q 011107 324 VHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401 (493)
Q Consensus 324 ~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 401 (493)
+||..+..|+|+.|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+.++++++++
T Consensus 859 -~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l 935 (1001)
T 3haz_A 859 -HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRV 935 (1001)
T ss_dssp -EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHC
T ss_pred -eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhC
Confidence 8888766799999999974 7889999999999999999996 7999999999999999999999999999999999
Q ss_pred ccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEec
Q 011107 402 SAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 402 ~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++|+|+||+++.+...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 936 ~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 936 QVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999877666678999999999999 568999999999999998875
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.1e-86 Score=700.91 Aligned_cols=434 Identities=17% Similarity=0.204 Sum_probs=392.3
Q ss_pred hhhhhc-ccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
++++++ +++.++.+|+++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+
T Consensus 49 tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 127 (528)
T 3v4c_A 49 PAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRT 127 (528)
T ss_dssp CSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 478888 999999999999999999999999999999999999999999999999999999999999999986 599999
Q ss_pred HHHHHHHHHHHHh--hcCCccc---ccccccCCCCceeeeecceEEEEEccCchhHHhhh--hHHHHHHHhCCEEEEeCC
Q 011107 83 KTSIKSALKELKH--WMTPEKA---KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~Vvlkps 155 (493)
++.++++++.+++ +...... +......+...++.++|+|||++|+|||||+.+.+ +++++||++||+||+|||
T Consensus 128 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps 207 (528)
T 3v4c_A 128 TGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207 (528)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECC
Confidence 9999999998887 3332211 00000112346789999999999999999999865 899999999999999999
Q ss_pred CCchHHHHHHHHHHh----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccc--cchhhhc
Q 011107 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (493)
Q Consensus 156 ~~~~~~~~~l~~~l~----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~--~~~~~el 226 (493)
+.+|.++..+++++. ++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+
T Consensus 208 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lEl 287 (528)
T 3v4c_A 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGEL 287 (528)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEec
Confidence 999999999999765 45 99999999999 668899999996 999999999999999999999999 9999999
Q ss_pred CCCCeEEEcCCC---CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCCCCCCcccccC
Q 011107 227 GGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIV 302 (493)
Q Consensus 227 gG~~p~iV~~da---Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~ 302 (493)
|||||+||++|| |++.|++.+++++| +|+||.|++++|||||++ +||+|+++|++++++++. ++.+||++
T Consensus 288 GGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-----~~~~gp~~ 361 (528)
T 3v4c_A 288 GSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAP-----QTMLTDGI 361 (528)
T ss_dssp CCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCC-----EECSCHHH
T ss_pred CCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhccc-----CCCCCHHH
Confidence 999999999999 88999999999999 999999999999999997 999999999999998764 36789999
Q ss_pred CHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCC---CcccccccccceeeeEeeCCHHHHHHHHhcCC
Q 011107 303 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (493)
Q Consensus 303 ~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 379 (493)
++.+.+++.++++ .+++++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++
T Consensus 362 ~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~ 437 (528)
T 3v4c_A 362 AKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437 (528)
T ss_dssp HHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCC
Confidence 9888888887764 356799999975 6899999999988887 89999999999999999999999999999999
Q ss_pred CCcEEEEecC--CHHHHHHHHhhcc--cceEEEcCCCcc-cCCCCCCccC-CCCCCCCCcc--hHHHHHHhhhccEE
Q 011107 380 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVH-LAVHSLPFGG-VQESGMGAYH--GKFSFDVFSHKKAV 448 (493)
Q Consensus 380 ~gl~a~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~-~~~~~~p~gG-~~~SG~G~~~--g~~~~~~~t~~k~v 448 (493)
|||+++|||+ |.+++++++++++ +|+|+||+++++ ...+.+|||| +|.||+|+++ |++|+++|++.|++
T Consensus 438 ~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 9999999999 8999999999997 999999996653 2458899999 9999999986 99999999999874
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.2e-85 Score=690.41 Aligned_cols=432 Identities=16% Similarity=0.204 Sum_probs=388.5
Q ss_pred hhhhh-cccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETK-KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~-~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
+++++ ++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+
T Consensus 16 tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~ 94 (510)
T 1ez0_A 16 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 94 (510)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 57889 7999999999999999999999999999999999999999999999999999999999999998885 599999
Q ss_pred HHHHHHHHHHHHh--hcCCccccc-ccc-cCC-CCceeeeecceEEEEEccCchhHHhh--hhHHHHHHHhCCEEEEeCC
Q 011107 83 KTSIKSALKELKH--WMTPEKAKT-SIT-TFP-SSAEIVPEPFGVVLIISPWNYPFLLS--LDPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~~-~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~~~AL~aGN~Vvlkps 155 (493)
++.++++++.+++ +........ +.. ..+ ...+++++|+|||++|+|||||+.+. .+++++||++||+||+|||
T Consensus 95 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps 174 (510)
T 1ez0_A 95 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 174 (510)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECC
Confidence 9999999998876 543221000 000 001 13578999999999999999999985 4999999999999999999
Q ss_pred CCchHHHHHHHHHHh----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccc--cchhhhc
Q 011107 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (493)
Q Consensus 156 ~~~~~~~~~l~~~l~----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~--~~~~~el 226 (493)
+.+|+++..+++++. ++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+
T Consensus 175 ~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lEL 254 (510)
T 1ez0_A 175 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254 (510)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEEC
Confidence 999999999999985 45 89999999999 677899999996 999999999999999999999886 9999999
Q ss_pred CCCCeEEEcCCCCHH--HHHHHHHHhhcccCCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCCCCCCcccccCC
Q 011107 227 GGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVN 303 (493)
Q Consensus 227 gG~~p~iV~~daDl~--~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~ 303 (493)
|||||+||++|||+| .|++.+++++| +|+||.|++++|||||++ ++|+|+++|++++++++. ||+++
T Consensus 255 GGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~ 324 (510)
T 1ez0_A 255 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLT 324 (510)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSS
T ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCC
Confidence 999999999999999 99999999999 999999999999999999 999999999999998763 68899
Q ss_pred HHHHHHHHHHHHHHHh--CCeEEeCCccCCCCceeeceEecCCCCC---CcccccccccceeeeEeeCCHHHHHHHHhcC
Q 011107 304 SNHFARLSKLLDDDKV--SGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378 (493)
Q Consensus 304 ~~~~~~~~~~i~~a~~--~~~~~~gg~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 378 (493)
+.+.+++.++++++.+ ++++++||. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|++
T Consensus 325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~ 401 (510)
T 1ez0_A 325 PGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML 401 (510)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC
Confidence 9999999999998863 569999987 3899999999988777 9999999999999999999999999999999
Q ss_pred CCCcEEEEecCCH--HHHHHHHhhc--ccceEEEcCCCccc-CCCCCCccC-CCCCCCCCc--chHHHHHHhhhccEEe
Q 011107 379 TKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVHL-AVHSLPFGG-VQESGMGAY--HGKFSFDVFSHKKAVL 449 (493)
Q Consensus 379 ~~gl~a~v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~~~-~~~~~p~gG-~~~SG~G~~--~g~~~~~~~t~~k~v~ 449 (493)
+|||++||||+|. ++++++++++ ++|+|+||++..+. ..+.+|||| +|.||.|+. +|.+|+++|++.|++.
T Consensus 402 ~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 402 AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9999999999987 7999999999 79999999865432 346799999 789999854 7999999999988764
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.5e-80 Score=641.75 Aligned_cols=405 Identities=19% Similarity=0.189 Sum_probs=325.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHHHHHH-HHHHHHHHHHH
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIYEVAL-LKTSIKSALKE 92 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~~~~~~~~ 92 (493)
.+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||. .++...|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998 8875569988 88999999998
Q ss_pred HHhhcCCccc-cc--ccc--cCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 011107 93 LKHWMTPEKA-KT--SIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (493)
Q Consensus 93 ~~~~~~~~~~-~~--~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~ 167 (493)
++.+...... .. +.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 8887632210 00 000 01334678999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHh----h----h-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 168 LVG----E----Y-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 168 ~l~----~----a-lP~g~v~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
++. + + +|+|++|+|+ +. +.++.|+.|+ ||+|+||||+++|+.|++.+ +||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 65 6788999996 99999999999999998866 699999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 313 (493)
|||+|.|++.+++++| +|+| .|++++|||||+++ |+|+++|.+++++++. |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999886 65421 345
Q ss_pred -HHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 314 -LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 314 -i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 66554 4667775 4 789997 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCcc-----CCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccCCCCch
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTK 466 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~g-----G~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~~p~~~ 466 (493)
+++++++++++|+|+||++.. ..+.+||| |+|.||+|++ |++++++|++.|+|.++.. +.+ |||+.
T Consensus 379 ~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py~~ 449 (468)
T 1vlu_A 379 NAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDYLG 449 (468)
T ss_dssp HHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC--
T ss_pred HHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-ccccc
Confidence 999999999999999998764 35778999 9999999999 9999999999999988652 234 88973
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.5e-80 Score=640.99 Aligned_cols=410 Identities=20% Similarity=0.180 Sum_probs=333.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhc-------CCCch----
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-------DKPEL---- 72 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~~~---- 72 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+ |||..
T Consensus 16 tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~ 95 (463)
T 2h5g_A 16 ENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLS 95 (463)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhh
Confidence 5899999999999999999999999999999999999999999999999999999999999999 79987
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEE
Q 011107 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVL 152 (493)
Q Consensus 73 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvl 152 (493)
++. .|+..+++.+++++..++++.+.. .+......+...++.++|+|||++|+||| |...+ +++++||++||+||+
T Consensus 96 ~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVl 171 (463)
T 2h5g_A 96 LST-SKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLL 171 (463)
T ss_dssp CCH-HHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEE
T ss_pred hhH-HHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEE
Confidence 454 699999999999998887765432 11110012334678999999999999777 77766 899999999999999
Q ss_pred eCCCCchHHHHHHHHHHhhhc----CCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcC
Q 011107 153 KPSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227 (493)
Q Consensus 153 kps~~~~~~~~~l~~~l~~al----P~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg 227 (493)
|||+.+|.++..+++++.+++ |+|+||+|+|+.+.+..|+.|+ ||+|+||||+.+|+.|++.++ +||+++|+|
T Consensus 172 Kps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElG 249 (463)
T 2h5g_A 172 KGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSE 249 (463)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSC
T ss_pred ECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecC
Confidence 999999999999999999986 5999999999667789999996 999999999999999999877 899999999
Q ss_pred CCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHH
Q 011107 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307 (493)
Q Consensus 228 G~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~ 307 (493)
||||+||++|||+|.|++.+++++| .| ||.|++++|||||+++|| ||+ +
T Consensus 250 Gk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~ 298 (463)
T 2h5g_A 250 GICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TPL-----F 298 (463)
T ss_dssp CCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SHH-----H
T ss_pred CcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hHH-----H
Confidence 9999999999999999999999999 98 999999999999999998 232 2
Q ss_pred HHHHHHHHHHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEE
Q 011107 308 ARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386 (493)
Q Consensus 308 ~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 386 (493)
+ ++++++.+ +++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|++++||+++|
T Consensus 299 ~---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v 367 (463)
T 2h5g_A 299 D---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVI 367 (463)
T ss_dssp H---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEE
T ss_pred H---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEE
Confidence 2 34666544 56877544322234442 678999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--Cc--chHHHHHHhhhccEEeEecCCCCCCccCC
Q 011107 387 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AY--HGKFSFDVFSHKKAVLSRGFIGDVPVRYP 462 (493)
Q Consensus 387 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~--~g~~~~~~~t~~k~v~~~~~~~~~~~~~~ 462 (493)
||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| ++ +|++++++||+.|+|.++.. ..+ +
T Consensus 368 ~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~ 440 (463)
T 2h5g_A 368 VTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-S 440 (463)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-G
T ss_pred EeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-C
Confidence 999999999999999999999998764 3578999999999999 65 89999999999999988753 233 6
Q ss_pred CCchhH
Q 011107 463 PYTKGK 468 (493)
Q Consensus 463 p~~~~~ 468 (493)
||+..+
T Consensus 441 ~y~~~~ 446 (463)
T 2h5g_A 441 DFSEHG 446 (463)
T ss_dssp GGSTTS
T ss_pred Cccccc
Confidence 777543
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=6.1e-79 Score=634.78 Aligned_cols=416 Identities=13% Similarity=0.175 Sum_probs=362.2
Q ss_pred hcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHH
Q 011107 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK 87 (493)
Q Consensus 8 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~ 87 (493)
+.+++.++.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..+...+++.+
T Consensus 3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~- 81 (464)
T 3k9d_A 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV- 81 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH-
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH-
Confidence 3556777899999999999999999999999999999999999999999999999999999999887644443333333
Q ss_pred HHHHHHHhhcCCcccccc-cccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHH
Q 011107 88 SALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (493)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~ 166 (493)
..+......... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++
T Consensus 82 ------~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~ 155 (464)
T 3k9d_A 82 ------YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV 155 (464)
T ss_dssp ------HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred ------HHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHH
Confidence 222222111111 1123456788999999999999999999999999999999999999999999999999866
Q ss_pred HH----Hhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcC-CCCeEEEcCCC
Q 011107 167 KL----VGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGI 238 (493)
Q Consensus 167 ~~----l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~p~iV~~da 238 (493)
++ +.++ +|+|+||+|+| +.+.+..|++|+ ||+|+||||+. +++.+++++||+ +|+| ||+|+||++||
T Consensus 156 ~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dA 230 (464)
T 3k9d_A 156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSA 230 (464)
T ss_dssp HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTS
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCC
Confidence 54 5677 99999999999 678899999996 99999999997 456677889999 7888 99999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHH-------hhcCCCC--CCCCcccccCCHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE-------NFYGKNP--LESKDLSRIVNSNHFAR 309 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~-------~~~~g~~--~~~~~~gpl~~~~~~~~ 309 (493)
|++.|++.+++|+| +|+||.|+++++||||+++||+|+++|+++.. .++.|+| ++++++||+++.+++++
T Consensus 231 Dl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~ 309 (464)
T 3k9d_A 231 NIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQH 309 (464)
T ss_dssp CHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHH
Confidence 99999999999999 99999999999999999999999999999863 4455665 35789999999999999
Q ss_pred HHHHHHHHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHH----HHHhcCCCCcEE
Q 011107 310 LSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAA 384 (493)
Q Consensus 310 ~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a 384 (493)
+.++++.+.. ++++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||++
T Consensus 310 i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a 375 (464)
T 3k9d_A 310 IANLAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375 (464)
T ss_dssp HHHHTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence 9999988754 6799998753 567888865 89999999999999999997 799999999999
Q ss_pred EEecCCHHHHHHHHhhcccceEEEcCCCcc-------cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 385 YLFTNNKKLKQQFVETVSAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 385 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-------~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+|||+|.+++++|++++++|+|+||+++.+ ...+.+|||| +.+|.|.++|..++++|++.|+|...
T Consensus 376 ~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 376 IIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999999997753 2568899998 78999999999999999999999764
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=4.6e-76 Score=609.39 Aligned_cols=390 Identities=18% Similarity=0.204 Sum_probs=324.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHH-------HHHHHHH
Q 011107 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIY-------EVALLKT 84 (493)
Q Consensus 16 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~-------ev~~~~~ 84 (493)
.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+||+. .+++.. |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 355432 6777777
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++...+.. .+..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..
T Consensus 105 ~l~~~a~~~~~~--g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI--GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT--TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc--CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 777766543211 11111100112345688999999999999998 8 6889999999999999999999999999999
Q ss_pred HHHHH----hhh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 165 LAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 165 l~~~l----~~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
+++++ .++ +|+|+||+|+| +.+ .+..|..|+ ||.|+||||+.+|+.+++.+ +||+++|+|||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 566 99999999998 554 567777785 99999999999999998765 699999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 313 (493)
|||+|.|++.+++++| +|+| .|++++|||||+++||+|+++|++++++++. |+| ...++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p----------------~~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDA----------------DARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECH----------------HHHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCH----------------HHHHH
Confidence 9999999999999999 9999 9999999999999999999999999998876 543 12456
Q ss_pred HHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 314 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++.. | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 665421 1 12 35689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC----CcchHHHHHHhhhccEEeEecC
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G----~~~g~~~~~~~t~~k~v~~~~~ 453 (493)
++++++++++|+|+||+++. ..+..||||.+.||+| +++|++|+++||+.|+|+++..
T Consensus 379 a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 379 AMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp HHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred HHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 99999999999999999765 3578999999999998 6789999999999999988753
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3.8e-76 Score=607.05 Aligned_cols=387 Identities=18% Similarity=0.237 Sum_probs=333.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhH-------HHHHHHHH
Q 011107 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLKT 84 (493)
Q Consensus 16 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~~~~ 84 (493)
.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+||+. .++.. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999985 55532 48888888
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++...+. .. ...+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..
T Consensus 93 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 88887764432 11 1111000011334578899999999999986 47899999999999999999999999999999
Q ss_pred HHHHHh----hh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 165 LAKLVG----EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 165 l~~~l~----~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
+++++. ++ +|+|++|+|+| +.+ .++.|..|+ +|+|+||||+++|+.|++.+ .||+++|+|||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999998 55 89999999998 544 567777785 99999999999999999877 599999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
|||+|.|++.+++++| .|+| .|++++|||||+++||+|+++|++++++++.+
T Consensus 246 dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------------------------
T ss_pred CCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------------------------
Confidence 9999999999999999 9999 99999999999999999999999999876531
Q ss_pred HHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 317 DKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 317 a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
+.||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 298 -------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 364 (427)
T 1o20_A 298 -------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKK 364 (427)
T ss_dssp -------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred -------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHH
Confidence 1233221 12 33 885 35678999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC----CcchHHHHHHhhhccEEeEec
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G----~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++|+|+||++.. ..+.+||||.|.||+| +++|++++++|++.|+|.+++
T Consensus 365 ~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 365 FVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999998664 4578999999999997 467999999999999998865
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.9e-75 Score=606.52 Aligned_cols=375 Identities=18% Similarity=0.197 Sum_probs=323.0
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 011107 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (493)
Q Consensus 11 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~ 90 (493)
++..+.+++++++++|++||+.|+.+|.++|.++|+++++++++++++|++++++|+|||..+++..|+..+.+.+.
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~--- 77 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY--- 77 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH---
Confidence 46788999999999999999999999999999999999999999999999999999999999987546555555442
Q ss_pred HHHHhhcCCccccccc-ccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 011107 91 KELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l 169 (493)
+++......... ...+...+..++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++..+++++
T Consensus 78 ----~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 78 ----NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp ----HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred ----HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 122211111111 112345688999999999999999999999999999999999999999999999999988887
Q ss_pred h----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 170 G----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 170 ~----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
. ++ +|+|+||+++| +.+.+++|++|+ |+.|+||||+.++ +.+++++||+++|+|||+|+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 6 56 99999999999 678899999995 9999999999854 456778999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-CC
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SG 321 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~ 321 (493)
|++.+++|+| +|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++++++.. ++
T Consensus 230 Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999 999999999999999999999999999874 3899999999999999986543 34
Q ss_pred eEEeCCccC----CCCceeeceE-------ecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCC----CCcEEEE
Q 011107 322 KIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYL 386 (493)
Q Consensus 322 ~~~~gg~~~----~~g~~~~Ptv-------l~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~v 386 (493)
++ +||... ..|+|++||+ ++++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|
T Consensus 295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i 372 (452)
T 3my7_A 295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL 372 (452)
T ss_dssp GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence 54 576542 2589999998 788999999876 89999999999999999999999985 9999999
Q ss_pred ecCCHHHHHH---HHhhcccceEEEcCCCc
Q 011107 387 FTNNKKLKQQ---FVETVSAGGLVINDTAV 413 (493)
Q Consensus 387 ~t~d~~~~~~---~~~~l~~g~v~iN~~~~ 413 (493)
||+|.+.+++ +++++++|+|+||+++.
T Consensus 373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~ 402 (452)
T 3my7_A 373 YTNQDVNADRIRYFGDKMKTARILINIPTT 402 (452)
T ss_dssp ESCTTTCHHHHHHHHHHCCCSEEEESCCCC
T ss_pred EcCCHHHHHHHHHHHHhCCEEEEEECCCCC
Confidence 9999777777 99999999999998653
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.43 E-value=0.092 Score=52.05 Aligned_cols=336 Identities=17% Similarity=0.184 Sum_probs=173.8
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCC-C------chhhhHHHHHHH--------HHHHHHHHHHHHh
Q 011107 31 ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK-P------ELESSIYEVALL--------KTSIKSALKELKH 95 (493)
Q Consensus 31 ~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk-~------~~~a~~~ev~~~--------~~~~~~~~~~~~~ 95 (493)
..++..+..+-.+..+.+.+-++++.|+-....++..-+ . +.-. ..|+..+ .+.++.+.++++.
T Consensus 25 l~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I~~ 103 (423)
T 4gic_A 25 LAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERIRA 103 (423)
T ss_dssp HCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred hcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 345555555566666666666666655544433333211 1 1111 1233322 2345555566665
Q ss_pred hcCCcccccc-cc-cCCCCceeeeecceEEEEEccCc---hhHHhhhhHHHHHHHhCCE--EEEeCCCCchHHHHHHHHH
Q 011107 96 WMTPEKAKTS-IT-TFPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNA--LVLKPSEVAPASSSLLAKL 168 (493)
Q Consensus 96 ~~~~~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~--Vvlkps~~~~~~~~~l~~~ 168 (493)
+...+..... .. ..+.....++.|+--|++..|.- ||-. .+...+||-.+|.. |+.-|.+........|+.+
T Consensus 104 fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA 182 (423)
T 4gic_A 104 YAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAA 182 (423)
T ss_dssp HHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHH
T ss_pred HHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHH
Confidence 5443332211 11 22344567899999999999944 6644 45567899999986 4444543221112222211
Q ss_pred HhhhcCCCcEEEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cCCCCe--EEEcCCCC
Q 011107 169 VGEYMDLSSIRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGIN 239 (493)
Q Consensus 169 l~~alP~g~v~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lgG~~p--~iV~~daD 239 (493)
+.+ |+=.+.. |+.....+|. .. +||+|+=.|+.-+...=. ... ..|-.. ..|.+= +|-+++||
T Consensus 183 -~l~---Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr-~v~---g~VgIDm~AGPSEilViAD~~a~ 254 (423)
T 4gic_A 183 -YIS---GVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKK-LVF---GQVGIDMVAGPSEILVISDGRTD 254 (423)
T ss_dssp -HHH---TCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHH-HHB---TTBEECCCCCCCEEEEEECSCSC
T ss_pred -Hhc---CCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHH-Hhc---CCcCcccccccceEEEEeCCCCC
Confidence 111 3223333 3444445554 22 499999888775432211 111 112111 134443 34455689
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
.+..+.+++.-+= ++. ..+.++|..+ ++|.+++.+++.+.... +-.. +.+..-+++
T Consensus 255 p~~vAaDLlsQAE-Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~----------l~r~---~i~~~sl~~--- 310 (423)
T 4gic_A 255 PDWIAMDLFSQAE-HDE-----DAQAILISPD--AAHLEAVQASIERLLPG----------MERA---EVIRTSLER--- 310 (423)
T ss_dssp HHHHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG----------CTTH---HHHHHHHHH---
T ss_pred HHHHHHHHHHhhc-cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh----------CccH---HHHHHHHhc---
Confidence 9999988887754 322 2334666665 56666666666543211 1111 111122210
Q ss_pred CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 320 ~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
+| .++.++|++|+++++|..-. -..-|.++|.+ .++.
T Consensus 311 ------------------------------------~g---~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~ 347 (423)
T 4gic_A 311 ------------------------------------RG---GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVE 347 (423)
T ss_dssp ------------------------------------HC---EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGG
T ss_pred ------------------------------------Cc---eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHh
Confidence 01 13457999999999998422 35678899876 4666
Q ss_pred hc-ccceEEEcCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEE
Q 011107 400 TV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448 (493)
Q Consensus 400 ~l-~~g~v~iN~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v 448 (493)
++ .+|.|++..++.-. .++.+|- +|+.|+.+..+...|..+-++
T Consensus 348 ~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 348 SIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp GCCCCSEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEE
T ss_pred hCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeE
Confidence 66 48999998644311 2233344 455666666777888876654
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.48 E-value=0.79 Score=45.52 Aligned_cols=328 Identities=18% Similarity=0.200 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcCCccccc-c
Q 011107 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT-S 105 (493)
Q Consensus 39 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~~ev~~~--------~~~~~~~~~~~~~~~~~~~~~~-~ 105 (493)
.+-.+..+.+.+-++++.|+=....++...+- +.-. ..|+..+ .+-++.+.++++.+...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 34445566666666666665554444443221 1111 1244333 3455566667777665443321 1
Q ss_pred c-ccCCCCceeeeecceEEEEEccC---chhHHhhhhHHHHHHHhCCEEE--EeCCCCchHHHHHHHHHHhhhcCCCcEE
Q 011107 106 I-TTFPSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNALV--LKPSEVAPASSSLLAKLVGEYMDLSSIR 179 (493)
Q Consensus 106 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~Vv--lkps~~~~~~~~~l~~~l~~alP~g~v~ 179 (493)
. ...+.....++.|+--|++..|. -||- +.+...+||-.+|+.=| +-|..-.|.+ |+.+ +. .|+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~AA-~l---~Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LYAA-QL---CGVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HHHH-HH---TTCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH---HHHH-HH---cCCCE
Confidence 1 11233456788999999999996 4654 45556789999998654 4444223322 2111 11 13223
Q ss_pred EEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cCCCCe--EEEcCCCCHHHHHHHHHHh
Q 011107 180 VVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLKVACRRMIMG 250 (493)
Q Consensus 180 vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lgG~~p--~iV~~daDl~~Aa~~i~~~ 250 (493)
+.. |+.....+|. +. +||+|+=.|+.-+...=..-.... ..|-.. ..|.+= +|-+++||.+..+.+++.-
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~-G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc-CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 333 3444445554 22 399998888765432110000001 112111 134443 3445578999999888877
Q ss_pred hcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccC
Q 011107 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330 (493)
Q Consensus 251 ~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~ 330 (493)
+= ++. ..+.++|..+ ++|.+++.+++.+.... +-. . +.++.+.
T Consensus 260 AE-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~----------lpr---~----~ia~~sl------------ 302 (434)
T 1kae_A 260 AE-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAE----------LPR---A----ETARQAL------------ 302 (434)
T ss_dssp HT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT----------CTT---H----HHHHHHH------------
T ss_pred hc-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh---H----HHHHHHH------------
Confidence 54 322 2344566555 55666666655543211 001 1 1111110
Q ss_pred CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ccceEEEc
Q 011107 331 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVIN 409 (493)
Q Consensus 331 ~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN 409 (493)
..- .++.++|++|+++++|..-. -..-|.++|+. .++.++ .+|.|++.
T Consensus 303 --------------------------~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 303 --------------------------NAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVFLG 351 (434)
T ss_dssp --------------------------TTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEEES
T ss_pred --------------------------HcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchhcC
Confidence 011 35577999999999998432 35678899986 456666 58999999
Q ss_pred CCCcc-------cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 410 DTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 410 ~~~~~-------~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++.- ..++-+|-+ |+.|+.+..+...|.+.-++.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred CCCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 74431 144556665 455666666778888776653
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=52.86 E-value=22 Score=32.15 Aligned_cols=46 Identities=9% Similarity=0.190 Sum_probs=35.8
Q ss_pred hhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEEEeCC
Q 011107 137 LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGA 184 (493)
Q Consensus 137 ~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~vv~g~ 184 (493)
+..++..+.+||-||++.+. +.....+..++...+|.+++++++.+
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s 66 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYS 66 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEE
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccc
Confidence 44567788899999999876 44455567778888999999998653
No 56
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=47.93 E-value=43 Score=25.77 Aligned_cols=22 Identities=14% Similarity=0.164 Sum_probs=18.5
Q ss_pred eeeeEeeCCHHHHHHHHhcCCC
Q 011107 359 LLPILTVDKIEDSFDIINSGTK 380 (493)
Q Consensus 359 vl~v~~~~~~~eai~~~n~~~~ 380 (493)
-+.|+.|+|.+.|.++.|+.+|
T Consensus 55 ~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHHH
T ss_pred eEEEEECCCHHHHHHHHcCHHH
Confidence 6678999999999999886543
No 57
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=45.72 E-value=49 Score=26.66 Aligned_cols=70 Identities=7% Similarity=0.086 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhCCeEEeCCccC--CCCceee-----ceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCC
Q 011107 307 FARLSKLLDDDKVSGKIVHGGERD--KNKLRIA-----PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (493)
Q Consensus 307 ~~~~~~~i~~a~~~~~~~~gg~~~--~~g~~~~-----Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 379 (493)
.+...++.++..+.|.++.|+... ..+..+. |+|.++.-.+ ..|..|- +.|+.++|.|||++++.+.+
T Consensus 32 ~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~~~P 106 (124)
T 1s7i_A 32 VDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAAKIP 106 (124)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHHhCC
Confidence 345556666655566766554321 1222222 3443332222 3466664 45779999999999999876
Q ss_pred CC
Q 011107 380 KP 381 (493)
Q Consensus 380 ~g 381 (493)
+.
T Consensus 107 ~~ 108 (124)
T 1s7i_A 107 PG 108 (124)
T ss_dssp GG
T ss_pred cc
Confidence 53
No 58
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=26.54 E-value=92 Score=21.57 Aligned_cols=36 Identities=8% Similarity=-0.057 Sum_probs=26.8
Q ss_pred HHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 011107 25 ELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60 (493)
Q Consensus 25 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 60 (493)
.++.....|..+|.++|..+.......-..+..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566789999999999988777766666655554
No 59
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=23.03 E-value=1.9e+02 Score=21.72 Aligned_cols=23 Identities=22% Similarity=0.211 Sum_probs=19.3
Q ss_pred ceeeeEeeCCHHHHHHHHhcCCC
Q 011107 358 PLLPILTVDKIEDSFDIINSGTK 380 (493)
Q Consensus 358 Pvl~v~~~~~~~eai~~~n~~~~ 380 (493)
.-+.|+.|+|.+.|.++.|+..|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 46779999999999999887544
No 60
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=22.33 E-value=1.5e+02 Score=24.51 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=38.7
Q ss_pred cCCHHHHHHHHHHHHHH--HhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcC
Q 011107 301 IVNSNHFARLSKLLDDD--KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378 (493)
Q Consensus 301 l~~~~~~~~~~~~i~~a--~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 378 (493)
+.+++.+++..+..... +.||+++.-|.. +.++.+-.. |.. .-+.|+.|.|.+.+.++.++.
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~--------~~~lEG~~~-------e~~-~~~viieFPS~~aa~a~y~Sp 108 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF--------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFVEMIRDP 108 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE--------EEEEESCTT-------CCC-SEEEEEEESCHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC--------ceeEECCCC-------CCC-CeEEEEECCCHHHHHHHHcCH
Confidence 45666666666665554 237777665432 233433111 111 366799999999999998765
Q ss_pred CC
Q 011107 379 TK 380 (493)
Q Consensus 379 ~~ 380 (493)
.|
T Consensus 109 eY 110 (143)
T 3hhl_A 109 VY 110 (143)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 61
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.81 E-value=2.1e+02 Score=21.79 Aligned_cols=38 Identities=5% Similarity=-0.238 Sum_probs=27.6
Q ss_pred HHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 011107 26 LRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63 (493)
Q Consensus 26 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 63 (493)
++.....|+.++.++|..+.......-+.+..++..--
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~ 86 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYR 86 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445679999999999998877776666666655443
No 62
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=21.00 E-value=68 Score=20.80 Aligned_cols=28 Identities=25% Similarity=0.423 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHhhcC
Q 011107 41 RVSQLKSLMKMLNEREPDIVDALRQDLD 68 (493)
Q Consensus 41 R~~~L~~~a~~l~~~~~~la~~~~~e~G 68 (493)
..++|..+.+.|.+-++++++++..|..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888888888888888888776643
No 63
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.19 E-value=1.3e+02 Score=22.07 Aligned_cols=36 Identities=8% Similarity=-0.239 Sum_probs=26.6
Q ss_pred HHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 011107 25 ELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60 (493)
Q Consensus 25 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 60 (493)
.++.....|+.++.+++..+.......-+.+..++.
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 48 FSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555689999999999988777776666665554
No 64
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=20.15 E-value=45 Score=27.23 Aligned_cols=46 Identities=20% Similarity=0.267 Sum_probs=29.2
Q ss_pred CcEEEEeCChHh-HHHHHh-CCCCeEEEeCCHHHHHHHHHHHhccccc
Q 011107 176 SSIRVVEGAVAE-TSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTP 221 (493)
Q Consensus 176 g~v~vv~g~~~~-~~~L~~-~~v~~v~ftGs~~~g~~i~~~a~~~~~~ 221 (493)
|.+++++|+.+. -...+. .++..|++||+......+.+.+.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 567777775443 333444 4688889998877666676666554443
Done!