Query 011108
Match_columns 493
No_of_seqs 246 out of 1387
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 08:12:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011108.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011108hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 9E-123 2E-127 963.1 41.1 417 75-493 25-454 (454)
2 PLN02209 serine carboxypeptida 100.0 9E-103 2E-107 820.7 42.9 403 75-489 20-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 9E-102 2E-106 813.0 40.9 398 78-489 21-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1E-100 2E-105 805.0 32.4 398 84-486 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.7E-94 3.7E-99 766.0 38.7 390 82-490 35-462 (462)
6 PLN02213 sinapoylglucose-malat 100.0 2.2E-74 4.7E-79 586.8 31.7 309 168-489 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 5E-65 1.1E-69 524.9 21.7 378 91-487 73-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 3.5E-65 7.5E-70 493.8 16.4 382 94-485 3-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.5 3E-12 6.4E-17 125.1 22.7 131 94-266 2-132 (288)
10 TIGR03611 RutD pyrimidine util 99.4 3.1E-12 6.8E-17 123.2 17.1 116 110-267 2-117 (257)
11 PRK00870 haloalkane dehalogena 99.4 7.5E-11 1.6E-15 118.8 24.9 142 75-265 6-150 (302)
12 TIGR03056 bchO_mg_che_rel puta 99.4 5.1E-11 1.1E-15 117.0 20.1 108 121-268 26-133 (278)
13 PRK10673 acyl-CoA esterase; Pr 99.4 1.8E-11 3.9E-16 119.2 15.9 104 118-263 11-114 (255)
14 PHA02857 monoglyceride lipase; 99.3 1.2E-10 2.6E-15 115.4 21.7 125 105-267 9-134 (276)
15 PLN02824 hydrolase, alpha/beta 99.3 5.3E-11 1.2E-15 119.2 18.2 123 98-265 12-137 (294)
16 PRK03204 haloalkane dehalogena 99.3 2.2E-10 4.8E-15 114.9 19.8 121 96-265 16-136 (286)
17 TIGR03343 biphenyl_bphD 2-hydr 99.3 7E-10 1.5E-14 109.8 23.0 61 401-485 221-281 (282)
18 PLN02385 hydrolase; alpha/beta 99.2 5.1E-10 1.1E-14 115.4 19.4 128 105-266 70-198 (349)
19 PLN02298 hydrolase, alpha/beta 99.2 9.6E-10 2.1E-14 112.3 20.5 137 96-267 34-171 (330)
20 TIGR02427 protocat_pcaD 3-oxoa 99.2 1.1E-09 2.4E-14 104.3 19.5 61 401-485 191-251 (251)
21 PRK10349 carboxylesterase BioH 99.2 1.1E-09 2.3E-14 107.4 18.2 63 400-486 193-255 (256)
22 PLN02679 hydrolase, alpha/beta 99.2 2.1E-09 4.4E-14 111.6 19.9 105 122-265 87-191 (360)
23 PRK03592 haloalkane dehalogena 99.2 9.4E-10 2E-14 110.3 16.7 115 106-267 16-130 (295)
24 PF12697 Abhydrolase_6: Alpha/ 99.1 2.8E-10 6.1E-15 106.4 10.2 104 126-268 1-104 (228)
25 TIGR02240 PHA_depoly_arom poly 99.1 6.1E-09 1.3E-13 103.5 19.7 117 106-266 11-127 (276)
26 TIGR01738 bioH putative pimelo 99.1 4.1E-09 8.9E-14 100.1 17.0 60 401-484 186-245 (245)
27 PRK11126 2-succinyl-6-hydroxy- 99.1 1.5E-09 3.2E-14 105.0 12.2 100 123-264 2-101 (242)
28 KOG4178 Soluble epoxide hydrol 99.0 1.6E-08 3.4E-13 101.4 19.0 138 92-270 20-158 (322)
29 PLN03084 alpha/beta hydrolase 99.0 1.1E-08 2.4E-13 107.0 18.9 131 93-266 103-233 (383)
30 PRK14875 acetoin dehydrogenase 99.0 1.7E-08 3.7E-13 104.1 19.3 103 121-264 129-231 (371)
31 TIGR03695 menH_SHCHC 2-succiny 99.0 1.3E-08 2.8E-13 96.5 16.8 105 123-265 1-105 (251)
32 PLN02652 hydrolase; alpha/beta 99.0 1.2E-08 2.7E-13 107.2 18.1 130 104-267 118-247 (395)
33 PRK08775 homoserine O-acetyltr 99.0 9.8E-09 2.1E-13 105.7 16.1 63 402-487 276-339 (343)
34 PLN03087 BODYGUARD 1 domain co 99.0 4.4E-08 9.6E-13 105.0 21.6 133 93-264 175-308 (481)
35 PLN02894 hydrolase, alpha/beta 99.0 8E-08 1.7E-12 101.3 23.2 120 107-265 92-211 (402)
36 PRK10749 lysophospholipase L2; 99.0 1.1E-07 2.3E-12 97.5 22.8 127 105-266 39-167 (330)
37 TIGR01249 pro_imino_pep_1 prol 99.0 2.2E-08 4.7E-13 101.4 17.1 125 96-266 6-131 (306)
38 PRK06489 hypothetical protein; 98.9 3.9E-08 8.5E-13 102.0 17.6 62 401-487 290-357 (360)
39 PLN02965 Probable pheophorbida 98.9 4.5E-08 9.8E-13 96.1 16.9 60 402-485 192-251 (255)
40 PLN02578 hydrolase 98.9 3.9E-08 8.4E-13 101.8 16.3 112 106-264 75-186 (354)
41 COG1506 DAP2 Dipeptidyl aminop 98.9 3E-08 6.5E-13 110.2 15.3 136 98-267 367-509 (620)
42 TIGR01607 PST-A Plasmodium sub 98.9 3.5E-07 7.6E-12 94.0 21.9 153 105-266 6-186 (332)
43 PRK00175 metX homoserine O-ace 98.8 1.6E-07 3.6E-12 98.1 18.6 69 399-487 305-374 (379)
44 PRK07581 hypothetical protein; 98.8 3.9E-07 8.5E-12 93.4 20.1 64 398-485 270-334 (339)
45 KOG4409 Predicted hydrolase/ac 98.7 5.7E-07 1.2E-11 90.7 17.7 133 96-269 67-199 (365)
46 PLN02980 2-oxoglutarate decarb 98.7 4.5E-07 9.7E-12 110.6 19.0 107 120-264 1368-1479(1655)
47 PRK05077 frsA fermentation/res 98.7 9E-07 1.9E-11 93.8 17.8 130 99-266 171-301 (414)
48 KOG1454 Predicted hydrolase/ac 98.6 2.2E-06 4.7E-11 87.9 16.8 61 403-487 264-324 (326)
49 PLN02511 hydrolase 98.5 7.7E-07 1.7E-11 93.5 11.9 116 98-240 75-193 (388)
50 PLN02211 methyl indole-3-aceta 98.5 4.9E-06 1.1E-10 83.1 16.5 59 403-486 211-269 (273)
51 TIGR01392 homoserO_Ac_trn homo 98.4 9.8E-06 2.1E-10 83.7 18.1 68 398-485 283-351 (351)
52 PRK10566 esterase; Provisional 98.4 4.8E-06 1E-10 81.1 14.8 62 403-486 186-247 (249)
53 PRK05855 short chain dehydroge 98.4 4.9E-06 1.1E-10 90.9 15.8 101 105-238 11-112 (582)
54 TIGR03100 hydr1_PEP hydrolase, 98.4 3.4E-05 7.3E-10 77.1 20.3 80 168-267 57-136 (274)
55 PF00561 Abhydrolase_1: alpha/ 98.4 7.4E-07 1.6E-11 84.4 7.4 57 401-481 173-229 (230)
56 COG2267 PldB Lysophospholipase 98.4 3.2E-05 7E-10 78.4 18.8 274 94-488 9-295 (298)
57 COG0596 MhpC Predicted hydrola 98.3 8.3E-05 1.8E-09 69.7 19.5 104 123-266 21-124 (282)
58 PRK10985 putative hydrolase; P 98.3 2.1E-05 4.5E-10 80.4 16.3 110 106-240 41-151 (324)
59 PF00326 Peptidase_S9: Prolyl 98.3 8.3E-06 1.8E-10 77.9 11.5 92 167-270 13-104 (213)
60 PLN02872 triacylglycerol lipas 98.2 1.8E-05 3.9E-10 83.3 13.3 61 403-486 325-388 (395)
61 PLN02442 S-formylglutathione h 98.2 5.6E-05 1.2E-09 75.9 15.9 48 402-469 216-264 (283)
62 KOG1455 Lysophospholipase [Lip 98.1 0.0002 4.4E-09 71.3 18.5 129 105-265 36-164 (313)
63 PRK06765 homoserine O-acetyltr 98.1 4.8E-05 1E-09 79.9 14.9 71 397-487 317-388 (389)
64 TIGR02821 fghA_ester_D S-formy 97.9 0.00077 1.7E-08 67.3 19.0 50 403-472 211-261 (275)
65 PF10340 DUF2424: Protein of u 97.9 2.3E-05 4.9E-10 81.0 7.8 132 109-269 106-239 (374)
66 PRK10115 protease 2; Provision 97.9 0.00023 4.9E-09 80.2 15.0 140 99-269 419-563 (686)
67 PRK11460 putative hydrolase; P 97.8 0.00074 1.6E-08 65.8 16.1 62 403-484 148-209 (232)
68 PRK13604 luxD acyl transferase 97.6 0.0026 5.7E-08 64.4 16.3 124 105-266 18-142 (307)
69 TIGR03101 hydr2_PEP hydrolase, 97.5 0.0011 2.3E-08 66.3 11.7 130 106-273 9-142 (266)
70 PRK11071 esterase YqiA; Provis 97.4 0.0026 5.6E-08 60.1 12.6 54 403-485 136-189 (190)
71 TIGR01840 esterase_phb esteras 97.4 0.0008 1.7E-08 64.4 8.9 28 404-431 169-196 (212)
72 KOG2564 Predicted acetyltransf 97.4 0.00046 1E-08 67.9 7.1 110 121-264 72-181 (343)
73 PF02230 Abhydrolase_2: Phosph 97.1 0.0024 5.2E-08 61.3 9.3 59 403-485 155-213 (216)
74 KOG2100 Dipeptidyl aminopeptid 97.1 0.0033 7.1E-08 71.5 11.1 144 95-268 499-647 (755)
75 TIGR01838 PHA_synth_I poly(R)- 97.1 0.029 6.4E-07 61.3 17.9 86 168-268 220-305 (532)
76 TIGR01836 PHA_synth_III_C poly 97.0 0.024 5.2E-07 58.5 15.5 63 401-486 284-349 (350)
77 cd00707 Pancreat_lipase_like P 96.9 0.00093 2E-08 66.9 4.8 113 121-264 34-146 (275)
78 KOG2382 Predicted alpha/beta h 96.9 0.035 7.6E-07 56.2 15.9 61 402-486 252-312 (315)
79 COG3509 LpqC Poly(3-hydroxybut 96.8 0.011 2.3E-07 59.1 10.6 126 105-265 43-179 (312)
80 KOG1552 Predicted alpha/beta h 96.8 0.014 3.1E-07 57.2 11.1 64 403-490 192-255 (258)
81 PRK05371 x-prolyl-dipeptidyl a 96.7 0.054 1.2E-06 62.0 17.0 100 161-284 272-385 (767)
82 TIGR03230 lipo_lipase lipoprot 96.6 0.0092 2E-07 63.5 9.1 81 168-264 73-153 (442)
83 KOG1515 Arylacetamide deacetyl 96.5 0.026 5.7E-07 58.1 11.8 148 94-270 61-212 (336)
84 PF03096 Ndr: Ndr family; Int 96.4 0.016 3.4E-07 58.0 9.0 247 122-488 22-280 (283)
85 PRK10162 acetyl esterase; Prov 96.4 0.03 6.5E-07 57.2 11.2 63 200-267 135-197 (318)
86 PF03583 LIP: Secretory lipase 96.3 0.14 3E-06 51.7 15.4 69 403-491 219-289 (290)
87 COG0400 Predicted esterase [Ge 96.3 0.089 1.9E-06 50.5 13.1 59 403-486 146-204 (207)
88 PLN00021 chlorophyllase 96.2 0.015 3.3E-07 59.4 8.1 116 120-267 49-168 (313)
89 PF08386 Abhydrolase_4: TAP-li 96.2 0.019 4E-07 48.8 7.2 65 403-491 34-98 (103)
90 PF05448 AXE1: Acetyl xylan es 96.1 0.039 8.4E-07 56.6 10.3 129 105-267 65-211 (320)
91 TIGR00976 /NonD putative hydro 96.0 0.036 7.8E-07 61.0 10.4 131 105-269 5-136 (550)
92 PF00975 Thioesterase: Thioest 95.4 0.054 1.2E-06 51.8 7.6 101 125-264 2-103 (229)
93 COG3208 GrsT Predicted thioest 95.2 0.43 9.3E-06 46.6 13.3 59 403-485 176-234 (244)
94 PF10503 Esterase_phd: Esteras 95.0 0.086 1.9E-06 51.1 7.7 51 204-264 81-131 (220)
95 COG1647 Esterase/lipase [Gener 94.9 0.14 3.1E-06 49.2 8.8 62 403-486 181-243 (243)
96 PF07519 Tannase: Tannase and 94.9 1.2 2.6E-05 48.3 16.8 87 392-491 342-431 (474)
97 PF10230 DUF2305: Uncharacteri 94.7 0.26 5.7E-06 49.1 10.6 123 123-269 2-126 (266)
98 KOG4391 Predicted alpha/beta h 94.2 0.14 3E-06 49.2 6.7 120 108-267 66-186 (300)
99 KOG2984 Predicted hydrolase [G 94.1 0.39 8.4E-06 45.7 9.4 61 403-487 216-276 (277)
100 KOG1838 Alpha/beta hydrolase [ 94.1 0.24 5.3E-06 51.9 8.9 132 97-265 96-236 (409)
101 PF12695 Abhydrolase_5: Alpha/ 93.9 0.11 2.4E-06 45.4 5.5 42 403-467 104-145 (145)
102 cd00312 Esterase_lipase Estera 93.8 0.26 5.6E-06 53.2 9.0 39 200-239 157-195 (493)
103 PF05577 Peptidase_S28: Serine 93.6 0.3 6.5E-06 52.0 9.0 100 167-277 58-160 (434)
104 PF02129 Peptidase_S15: X-Pro 92.8 0.15 3.1E-06 50.8 4.8 84 168-269 57-140 (272)
105 PF06500 DUF1100: Alpha/beta h 92.4 0.081 1.7E-06 55.7 2.4 83 167-268 217-299 (411)
106 COG0657 Aes Esterase/lipase [L 92.2 1.2 2.5E-05 45.1 10.7 47 217-269 149-195 (312)
107 KOG2281 Dipeptidyl aminopeptid 92.0 1.8 3.8E-05 47.8 11.9 56 394-469 793-848 (867)
108 KOG2931 Differentiation-relate 92.0 3.9 8.4E-05 41.2 13.5 63 403-489 246-308 (326)
109 COG4099 Predicted peptidase [G 91.8 1.6 3.4E-05 44.0 10.4 46 211-266 260-305 (387)
110 PF07859 Abhydrolase_3: alpha/ 90.9 0.25 5.5E-06 46.5 3.9 63 198-267 47-112 (211)
111 PF01764 Lipase_3: Lipase (cla 90.7 0.6 1.3E-05 41.0 6.0 62 199-266 46-107 (140)
112 PF12695 Abhydrolase_5: Alpha/ 90.7 0.46 1E-05 41.4 5.2 92 125-263 1-93 (145)
113 PF05990 DUF900: Alpha/beta hy 90.4 0.41 9E-06 46.7 5.0 74 195-269 67-141 (233)
114 PLN02454 triacylglycerol lipas 89.9 0.89 1.9E-05 48.0 7.2 69 196-267 205-273 (414)
115 KOG3975 Uncharacterized conser 89.4 1.2 2.6E-05 43.8 7.0 96 121-238 27-128 (301)
116 KOG4667 Predicted esterase [Li 89.3 7.4 0.00016 37.6 12.1 180 171-473 65-245 (269)
117 PF05728 UPF0227: Uncharacteri 88.0 0.82 1.8E-05 43.2 4.9 44 216-272 55-98 (187)
118 TIGR03502 lipase_Pla1_cef extr 87.8 2.2 4.8E-05 48.8 9.0 100 122-240 448-575 (792)
119 cd00741 Lipase Lipase. Lipase 86.8 1.5 3.2E-05 39.4 5.7 60 198-265 9-68 (153)
120 cd00519 Lipase_3 Lipase (class 85.9 1.8 3.9E-05 41.7 6.2 59 200-266 111-169 (229)
121 PRK10252 entF enterobactin syn 85.7 4.9 0.00011 48.7 11.1 102 123-263 1068-1169(1296)
122 KOG2183 Prolylcarboxypeptidase 84.0 1.8 3.8E-05 45.5 5.3 68 168-239 111-186 (492)
123 PF00151 Lipase: Lipase; Inte 83.5 0.32 6.9E-06 50.2 -0.3 105 120-243 68-173 (331)
124 PLN02571 triacylglycerol lipas 83.2 3.2 6.8E-05 44.0 6.9 69 198-267 205-277 (413)
125 KOG4627 Kynurenine formamidase 83.2 0.93 2E-05 43.3 2.7 73 178-266 101-173 (270)
126 PLN02733 phosphatidylcholine-s 83.0 2.1 4.5E-05 45.9 5.6 41 197-240 142-182 (440)
127 PF11144 DUF2920: Protein of u 82.3 2.7 5.9E-05 44.2 6.0 60 198-267 161-221 (403)
128 PF12146 Hydrolase_4: Putative 82.1 9.3 0.0002 30.6 7.8 79 106-208 1-79 (79)
129 PRK10439 enterobactin/ferric e 81.6 14 0.00031 39.2 11.3 56 200-265 266-323 (411)
130 PF05677 DUF818: Chlamydia CHL 80.8 4.1 9E-05 41.9 6.5 61 167-236 170-231 (365)
131 PF07819 PGAP1: PGAP1-like pro 80.4 13 0.00029 35.9 9.8 65 198-269 61-128 (225)
132 COG0429 Predicted hydrolase of 80.0 25 0.00055 36.1 11.8 122 108-264 62-185 (345)
133 PRK04940 hypothetical protein; 79.4 2.5 5.5E-05 39.6 4.2 40 220-272 60-99 (180)
134 PLN02753 triacylglycerol lipas 79.2 4.9 0.00011 43.7 6.8 72 195-266 285-360 (531)
135 PLN02719 triacylglycerol lipas 77.7 5.5 0.00012 43.2 6.6 71 197-267 273-347 (518)
136 PF11288 DUF3089: Protein of u 76.8 3.5 7.6E-05 39.5 4.4 63 198-266 75-138 (207)
137 COG0627 Predicted esterase [Ge 76.1 8.4 0.00018 39.5 7.2 130 122-268 52-190 (316)
138 PF08840 BAAT_C: BAAT / Acyl-C 74.1 4 8.6E-05 39.1 4.1 47 207-264 9-55 (213)
139 smart00824 PKS_TE Thioesterase 73.7 18 0.00039 32.9 8.4 77 167-263 24-100 (212)
140 PF03283 PAE: Pectinacetyleste 73.1 24 0.00051 36.9 9.8 147 110-267 38-199 (361)
141 PLN02761 lipase class 3 family 73.0 9.9 0.00021 41.4 7.0 70 197-266 268-343 (527)
142 PF06342 DUF1057: Alpha/beta h 71.7 72 0.0016 32.2 12.2 90 393-484 202-296 (297)
143 PF06057 VirJ: Bacterial virul 71.7 7.2 0.00016 36.9 5.0 63 195-266 46-108 (192)
144 KOG3101 Esterase D [General fu 70.1 49 0.0011 32.1 10.1 128 92-234 7-155 (283)
145 PF11187 DUF2974: Protein of u 69.6 7 0.00015 38.0 4.7 39 201-243 69-107 (224)
146 PLN02408 phospholipase A1 69.4 11 0.00025 39.2 6.4 64 198-266 179-242 (365)
147 PF00756 Esterase: Putative es 69.3 13 0.00028 35.8 6.6 58 200-268 95-153 (251)
148 PRK14566 triosephosphate isome 68.5 13 0.00028 36.9 6.4 61 197-268 188-248 (260)
149 PLN02802 triacylglycerol lipas 68.0 12 0.00025 40.7 6.2 64 198-266 309-372 (509)
150 COG1073 Hydrolases of the alph 67.7 12 0.00026 36.2 6.0 62 404-487 233-297 (299)
151 KOG2551 Phospholipase/carboxyh 67.6 15 0.00033 35.5 6.4 59 403-486 163-223 (230)
152 KOG2565 Predicted hydrolases o 67.4 36 0.00078 35.6 9.3 136 105-271 132-270 (469)
153 COG4757 Predicted alpha/beta h 66.1 14 0.00029 36.3 5.7 66 168-238 57-123 (281)
154 PLN02324 triacylglycerol lipas 65.6 18 0.00038 38.4 6.9 70 197-267 193-267 (415)
155 PRK14567 triosephosphate isome 64.7 19 0.00041 35.7 6.6 61 197-268 178-238 (253)
156 PLN02847 triacylglycerol lipas 64.0 14 0.0003 40.9 6.0 63 192-262 222-288 (633)
157 KOG4569 Predicted lipase [Lipi 62.5 16 0.00034 37.8 5.8 56 205-266 159-214 (336)
158 PF01738 DLH: Dienelactone hyd 62.5 33 0.00071 32.4 7.8 48 401-468 143-190 (218)
159 PLN00413 triacylglycerol lipas 61.4 8.9 0.00019 41.3 3.8 39 202-243 269-307 (479)
160 PF08237 PE-PPE: PE-PPE domain 61.1 34 0.00074 33.2 7.6 86 170-264 4-89 (225)
161 COG2945 Predicted hydrolase of 60.5 9.7 0.00021 36.1 3.5 57 177-241 68-124 (210)
162 PF06821 Ser_hydrolase: Serine 60.4 14 0.0003 34.2 4.6 43 404-471 115-157 (171)
163 PF05057 DUF676: Putative seri 59.6 14 0.00031 35.4 4.7 50 195-245 54-103 (217)
164 COG2272 PnbA Carboxylesterase 58.2 53 0.0012 35.5 8.9 33 204-237 165-197 (491)
165 PRK07868 acyl-CoA synthetase; 57.6 17 0.00037 43.1 5.8 61 402-486 296-360 (994)
166 PF08840 BAAT_C: BAAT / Acyl-C 57.5 8.9 0.00019 36.7 2.9 48 402-468 114-163 (213)
167 PLN02310 triacylglycerol lipas 57.4 22 0.00048 37.6 5.9 63 199-266 187-250 (405)
168 PLN02162 triacylglycerol lipas 57.1 14 0.00031 39.6 4.5 40 202-244 263-302 (475)
169 KOG2182 Hydrolytic enzymes of 57.1 52 0.0011 35.7 8.6 94 169-273 119-215 (514)
170 PLN03037 lipase class 3 family 56.8 24 0.00052 38.5 6.2 46 200-245 297-343 (525)
171 PF03959 FSH1: Serine hydrolas 56.3 9.9 0.00022 36.3 3.0 49 403-475 161-209 (212)
172 PLN02934 triacylglycerol lipas 54.1 29 0.00063 37.7 6.3 40 202-244 306-345 (515)
173 PF12740 Chlorophyllase2: Chlo 53.5 64 0.0014 32.1 8.1 40 221-265 92-131 (259)
174 PRK07868 acyl-CoA synthetase; 52.7 27 0.00059 41.4 6.4 22 219-240 140-161 (994)
175 TIGR03712 acc_sec_asp2 accesso 51.2 36 0.00078 36.8 6.3 114 108-267 277-392 (511)
176 COG3319 Thioesterase domains o 50.0 1.8E+02 0.0038 29.0 10.7 59 195-266 46-104 (257)
177 COG4782 Uncharacterized protei 49.5 26 0.00056 36.4 4.8 118 121-269 114-238 (377)
178 TIGR01839 PHA_synth_II poly(R) 49.3 4.1E+02 0.009 29.5 15.4 29 402-430 440-468 (560)
179 PLN03082 Iron-sulfur cluster a 49.1 10 0.00023 34.9 1.7 66 121-187 76-148 (163)
180 PLN02429 triosephosphate isome 48.2 46 0.00099 34.1 6.3 60 198-268 239-299 (315)
181 PF05576 Peptidase_S37: PS-10 48.0 79 0.0017 33.7 8.1 89 120-234 60-148 (448)
182 KOG3079 Uridylate kinase/adeny 47.1 11 0.00023 35.6 1.5 17 121-137 5-21 (195)
183 PLN02561 triosephosphate isome 46.8 49 0.0011 32.8 6.2 60 197-267 179-239 (253)
184 PF02450 LCAT: Lecithin:choles 43.9 19 0.00042 37.8 3.1 38 205-242 104-141 (389)
185 PF06259 Abhydrolase_8: Alpha/ 42.4 65 0.0014 30.1 6.0 66 167-240 62-129 (177)
186 PF10142 PhoPQ_related: PhoPQ- 41.0 92 0.002 32.7 7.4 93 355-491 235-328 (367)
187 PF01083 Cutinase: Cutinase; 39.4 40 0.00086 31.4 4.1 86 169-269 40-127 (179)
188 TIGR01911 HesB_rel_seleno HesB 38.8 33 0.00072 28.4 3.1 58 125-183 28-90 (92)
189 PRK10081 entericidin B membran 38.2 39 0.00084 24.6 2.9 11 1-11 2-12 (48)
190 KOG3043 Predicted hydrolase re 38.0 69 0.0015 31.2 5.5 74 401-485 162-238 (242)
191 KOG1516 Carboxylesterase and r 37.5 2.1E+02 0.0045 31.3 10.0 33 205-238 181-213 (545)
192 cd00311 TIM Triosephosphate is 37.5 1E+02 0.0022 30.3 6.7 59 198-268 176-235 (242)
193 PF15253 STIL_N: SCL-interrupt 37.2 35 0.00076 36.1 3.6 37 92-131 198-235 (410)
194 PF07389 DUF1500: Protein of u 37.0 27 0.00058 28.6 2.1 28 201-230 7-34 (100)
195 PF10081 Abhydrolase_9: Alpha/ 36.6 52 0.0011 33.2 4.5 38 195-232 84-121 (289)
196 COG2945 Predicted hydrolase of 36.0 31 0.00068 32.8 2.7 56 403-484 149-204 (210)
197 PTZ00333 triosephosphate isome 35.3 93 0.002 30.9 6.1 60 197-267 182-242 (255)
198 COG5510 Predicted small secret 35.1 51 0.0011 23.4 2.9 12 1-12 2-13 (44)
199 KOG3724 Negative regulator of 34.9 49 0.0011 37.9 4.4 96 125-236 91-198 (973)
200 PRK00042 tpiA triosephosphate 34.9 1.2E+02 0.0026 30.0 6.8 60 197-268 179-239 (250)
201 PF01738 DLH: Dienelactone hyd 34.7 28 0.00061 32.8 2.3 42 197-239 76-117 (218)
202 PRK14565 triosephosphate isome 34.5 88 0.0019 30.7 5.7 54 197-269 173-226 (237)
203 PF06028 DUF915: Alpha/beta hy 34.1 1.3E+02 0.0028 29.8 6.9 65 402-487 183-255 (255)
204 PF06821 Ser_hydrolase: Serine 32.8 58 0.0013 30.0 4.0 39 219-266 54-92 (171)
205 KOG2541 Palmitoyl protein thio 32.3 1.8E+02 0.004 29.2 7.5 94 119-243 20-115 (296)
206 COG2819 Predicted hydrolase of 32.3 3.9E+02 0.0085 26.7 9.9 37 199-236 116-153 (264)
207 PF06309 Torsin: Torsin; Inte 31.4 38 0.00083 29.9 2.4 18 120-137 49-66 (127)
208 KOG3253 Predicted alpha/beta h 31.4 79 0.0017 35.2 5.1 51 397-470 298-348 (784)
209 PF00681 Plectin: Plectin repe 31.2 24 0.00051 25.0 0.9 34 261-294 10-43 (45)
210 PF08538 DUF1749: Protein of u 30.9 96 0.0021 31.6 5.5 71 195-270 82-153 (303)
211 COG3896 Chloramphenicol 3-O-ph 30.9 37 0.0008 31.4 2.2 27 123-150 22-52 (205)
212 TIGR01840 esterase_phb esteras 30.8 34 0.00075 32.2 2.2 116 120-264 10-129 (212)
213 PF10503 Esterase_phd: Esteras 30.7 42 0.0009 32.5 2.8 26 403-428 169-194 (220)
214 PRK09504 sufA iron-sulfur clus 30.6 41 0.00089 29.3 2.5 64 123-187 39-108 (122)
215 PRK13962 bifunctional phosphog 30.4 99 0.0022 34.9 6.0 61 197-268 574-635 (645)
216 PRK09502 iscA iron-sulfur clus 30.3 47 0.001 28.1 2.7 64 124-188 25-94 (107)
217 COG3150 Predicted esterase [Ge 28.7 62 0.0014 30.2 3.3 60 195-274 41-100 (191)
218 PRK11190 Fe/S biogenesis prote 28.2 80 0.0017 29.9 4.2 64 125-189 25-96 (192)
219 PF02402 Lysis_col: Lysis prot 27.5 21 0.00046 25.3 0.1 13 1-13 1-13 (46)
220 COG0412 Dienelactone hydrolase 27.3 89 0.0019 30.4 4.5 46 195-241 88-133 (236)
221 COG3571 Predicted hydrolase of 26.1 42 0.00092 31.1 1.8 26 216-241 85-110 (213)
222 PRK15492 triosephosphate isome 24.9 1.7E+02 0.0038 29.1 6.0 60 197-268 188-248 (260)
223 TIGR03341 YhgI_GntY IscR-regul 24.7 53 0.0012 31.0 2.3 64 124-188 23-94 (190)
224 COG4425 Predicted membrane pro 24.7 1E+02 0.0022 33.2 4.4 36 197-232 374-409 (588)
225 KOG2369 Lecithin:cholesterol a 24.6 77 0.0017 34.1 3.6 75 403-488 373-453 (473)
226 PRK06762 hypothetical protein; 24.3 45 0.00097 30.0 1.7 14 124-137 2-15 (166)
227 TIGR01849 PHB_depoly_PhaZ poly 23.4 93 0.002 33.1 4.0 57 205-270 157-213 (406)
228 PF03403 PAF-AH_p_II: Platelet 23.1 51 0.0011 34.7 2.0 38 221-269 229-266 (379)
229 PLN02517 phosphatidylcholine-s 22.9 36 0.00077 37.9 0.8 39 202-240 194-233 (642)
230 COG0529 CysC Adenylylsulfate k 22.8 78 0.0017 29.9 2.9 23 121-144 20-44 (197)
231 PF00121 TIM: Triosephosphate 21.9 46 0.00099 32.8 1.3 61 197-268 177-238 (244)
232 PF13974 YebO: YebO-like prote 21.9 1.6E+02 0.0035 23.8 4.1 31 4-38 6-36 (80)
233 TIGR02011 IscA iron-sulfur clu 21.9 70 0.0015 26.9 2.3 64 123-187 22-91 (105)
234 PF07849 DUF1641: Protein of u 21.6 56 0.0012 22.9 1.3 20 352-371 12-31 (42)
235 KOG1553 Predicted alpha/beta h 21.4 5E+02 0.011 27.2 8.5 107 120-267 240-346 (517)
236 PF06028 DUF915: Alpha/beta hy 21.1 1.2E+02 0.0026 30.0 4.1 39 195-236 81-119 (255)
237 PF10605 3HBOH: 3HB-oligomer h 21.0 1.3E+02 0.0028 33.7 4.4 73 403-491 555-642 (690)
238 COG2936 Predicted acyl esteras 20.7 1.1E+02 0.0024 33.9 3.9 136 101-270 24-164 (563)
239 COG3673 Uncharacterized conser 20.7 88 0.0019 32.2 3.0 88 168-281 65-163 (423)
240 COG4188 Predicted dienelactone 20.2 95 0.0021 32.4 3.2 33 207-239 139-178 (365)
241 PF05277 DUF726: Protein of un 20.0 3.1E+02 0.0068 28.5 6.9 64 199-267 200-263 (345)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-123 Score=963.13 Aligned_cols=417 Identities=50% Similarity=0.893 Sum_probs=386.0
Q ss_pred cccCccccCCCCCCCCCceeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCC
Q 011108 75 MLADKIKWLPGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKD 154 (493)
Q Consensus 75 ~~~~~v~~LPg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~ 154 (493)
+++|+|+.|||+|.+++|+||||||+|+++.+++||||||||+++|+++||||||||||||||++ |+|.|+|||+|+.|
T Consensus 25 ~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~ 103 (454)
T KOG1282|consen 25 DEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYN 103 (454)
T ss_pred chhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCC
Confidence 67799999999998899999999999999899999999999999999999999999999999997 99999999999999
Q ss_pred CCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccch
Q 011108 155 GKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYV 234 (493)
Q Consensus 155 ~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~Yv 234 (493)
|++|+.|+|||||.||||||||||||||||+++++|+.+ +|+.+|+|+++||++||++||||++|+|||+|||||||||
T Consensus 104 G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YV 182 (454)
T KOG1282|consen 104 GKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYV 182 (454)
T ss_pred CCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceeh
Confidence 999999999999999999999999999999999998874 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccchhhhhhhhccCCChhhhhchhccccccc-----CCCChHHHH
Q 011108 235 PQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR-----EGNDTKECE 309 (493)
Q Consensus 235 P~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~-----~~~~~~~C~ 309 (493)
|+||++|+++|+....+.|||||++||||++|+..+..++.+|+|.||+||++.++.+++.|.+.. ....+..|.
T Consensus 183 P~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~ 262 (454)
T KOG1282|consen 183 PALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCN 262 (454)
T ss_pred HHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHH
Confidence 999999999998655678999999999999999999999999999999999999999999998841 123367899
Q ss_pred HHHHHHH-hhcCCCccccCCCCcCCCCCcCCCCCCCCCCCCCCchhHHHHHhChHHHHHHhccCCC---CCcccC-cc-c
Q 011108 310 TFLEKAS-DEIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTDYYVEAYLNTREVQTVLHVKPT---NWTACS-NL-F 383 (493)
Q Consensus 310 ~~~~~~~-~~~g~in~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vq~ALhv~~~---~w~~cs-~v-~ 383 (493)
.+++.+. ...++++.|+|+.+.|...............+++|...+.+.|||+++||+||||+.+ +|+.|| .+ .
T Consensus 263 ~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~~ 342 (454)
T KOG1282|consen 263 KAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVNY 342 (454)
T ss_pred HHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhhc
Confidence 9999988 6668999999999999862111000112457899998888999999999999999877 499999 77 6
Q ss_pred cCCCCCCCcHHHHHHhhhcC-ceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeC-CccccEEEEecCeEEEEE
Q 011108 384 NWTDSPSTVLPTIKNLIASG-IRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTN-DEVGGYVEAYQGLTLVTV 461 (493)
Q Consensus 384 ~~~d~~~s~~~~l~~Ll~~~-irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~-~~v~Gy~~~y~~Ltf~tV 461 (493)
.|.+...+|+|.+.+++.++ +|||||+||.|++||++||++|+++|+++.+++|+||+++ +|||||+++|+||+|+||
T Consensus 343 ~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tV 422 (454)
T KOG1282|consen 343 NYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATV 422 (454)
T ss_pred ccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEE
Confidence 79999999999999999865 9999999999999999999999999999999999999996 899999999999999999
Q ss_pred cCCCccCcccChHHHHHHHHHHHcCCCCCCCC
Q 011108 462 RGAGHLVPSDQPERALTLISSFLHGILPPSKP 493 (493)
Q Consensus 462 ~gAGH~vP~dqP~~al~l~~~fl~g~~~p~~~ 493 (493)
+|||||||.|||++|+.||++||.|+++|..+
T Consensus 423 rGaGH~VP~~~p~~al~m~~~fl~g~~l~~~~ 454 (454)
T KOG1282|consen 423 RGAGHMVPYDKPESALIMFQRFLNGQPLPSTP 454 (454)
T ss_pred eCCcccCCCCCcHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999999999864
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=8.8e-103 Score=820.66 Aligned_cols=403 Identities=29% Similarity=0.534 Sum_probs=351.5
Q ss_pred cccCccccCCCCCCCCCceeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCC
Q 011108 75 MLADKIKWLPGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKD 154 (493)
Q Consensus 75 ~~~~~v~~LPg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~ 154 (493)
++.|+|+.|||++.++++++||||++|++..+++||||||||+++|+++||||||||||||||+ +|+|.|+|||+++.+
T Consensus 20 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~ 98 (437)
T PLN02209 20 RSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNK 98 (437)
T ss_pred CccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccC
Confidence 4568999999998789999999999999877899999999999999999999999999999999 699999999999876
Q ss_pred C-----CccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccc
Q 011108 155 G-----KTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESY 229 (493)
Q Consensus 155 ~-----~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESY 229 (493)
+ .++.+|+||||+.|||||||||+||||||+++..++. +++++|+|+++||+.||++||+|++++|||+||||
T Consensus 99 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 99 VYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred CCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 3 3799999999999999999999999999987765543 66778899999999999999999999999999999
Q ss_pred cccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccchhhhhhhhccCCChhhhhchhccccccc--CCCChHH
Q 011108 230 AGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR--EGNDTKE 307 (493)
Q Consensus 230 gG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~--~~~~~~~ 307 (493)
||||||.+|++|+++|++..+++||||||+||||++||..+..++++|++.||+|++++++.+++.|.... ....+..
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 99999999999999887655678999999999999999999999999999999999999999999996521 1234568
Q ss_pred HHHHHHHHHhhcCCCccccCCCCcCCCCCcCCCCCCCCCCCCCCch---hHHHHHhChHHHHHHhccCCC---CCcccC-
Q 011108 308 CETFLEKASDEIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTD---YYVEAYLNTREVQTVLHVKPT---NWTACS- 380 (493)
Q Consensus 308 C~~~~~~~~~~~g~in~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vq~ALhv~~~---~w~~cs- 380 (493)
|..++.......+.+|.|++..+.|..... .....+|.. ..+..|||+++||+||||+.. .|..|+
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~-------~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~ 329 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNT-------QHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHR 329 (437)
T ss_pred HHHHHHHHHHHhhcCCcccccccccccccc-------ccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccc
Confidence 998888776666788888876667854211 112245643 367899999999999999853 799998
Q ss_pred ccccCCCCCCCcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecC-eEEE
Q 011108 381 NLFNWTDSPSTVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQG-LTLV 459 (493)
Q Consensus 381 ~v~~~~d~~~s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~-Ltf~ 459 (493)
.+ .+.+...++++.+.+++.+|+|||||+||.|.+||+.||++|+++|+|+++++|++|+.+++++||+|+|++ |||+
T Consensus 330 ~~-~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv 408 (437)
T PLN02209 330 GI-PYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFA 408 (437)
T ss_pred hh-hcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEE
Confidence 44 233333345555556666799999999999999999999999999999999999999999999999999996 9999
Q ss_pred EEcCCCccCcccChHHHHHHHHHHHcCCCC
Q 011108 460 TVRGAGHLVPSDQPERALTLISSFLHGILP 489 (493)
Q Consensus 460 tV~gAGH~vP~dqP~~al~l~~~fl~g~~~ 489 (493)
+|+||||||| +||++|++||++|+.|+++
T Consensus 409 ~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 409 TVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred EEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999998 6999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=8.9e-102 Score=812.96 Aligned_cols=398 Identities=31% Similarity=0.577 Sum_probs=351.1
Q ss_pred CccccCCCCCCCCCceeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCC---
Q 011108 78 DKIKWLPGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKD--- 154 (493)
Q Consensus 78 ~~v~~LPg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~--- 154 (493)
+.|++|||++.++++++||||++|++..+++||||||||+++|+++||||||||||||||+ .|+|.|+|||+++.+
T Consensus 21 ~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~ 99 (433)
T PLN03016 21 SIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFN 99 (433)
T ss_pred CeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccC
Confidence 7899999997778999999999999877899999999999999999999999999999999 699999999998743
Q ss_pred --CCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEecccccc
Q 011108 155 --GKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGH 232 (493)
Q Consensus 155 --~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~ 232 (493)
+.++.+|++||++.|||||||||+||||||+++..++. +|+++|+|+++||+.||++||+|+++||||+|||||||
T Consensus 100 ~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~ 177 (433)
T PLN03016 100 GSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGM 177 (433)
T ss_pred CCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccce
Confidence 35789999999999999999999999999987765542 67778899999999999999999999999999999999
Q ss_pred chHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccchhhhhhhhccCCChhhhhchhccccccc--CCCChHHHHH
Q 011108 233 YVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR--EGNDTKECET 310 (493)
Q Consensus 233 YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~--~~~~~~~C~~ 310 (493)
|||++|++|+++|++...++||||||+||||++||..+..++.+|+|.||+|++++++.+++.|.... ....+..|..
T Consensus 178 yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~ 257 (433)
T PLN03016 178 IVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLK 257 (433)
T ss_pred ehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHH
Confidence 99999999999987655678999999999999999999999999999999999999999999997521 1234678999
Q ss_pred HHHHHHhhcCCCccccCCCCcCCCCCcCCCCCCCCCCCCCCch---hHHHHHhChHHHHHHhccCCC---CCcccC-ccc
Q 011108 311 FLEKASDEIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTD---YYVEAYLNTREVQTVLHVKPT---NWTACS-NLF 383 (493)
Q Consensus 311 ~~~~~~~~~g~in~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vq~ALhv~~~---~w~~cs-~v~ 383 (493)
++.......+.+|+|||+.+.|..... ..++|.. ..++.|||+++||+||||+.. +|..|+ .+.
T Consensus 258 ~~~~~~~~~~~~n~yni~~~~~~~~~~---------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~ 328 (433)
T PLN03016 258 LTEEYHKCTAKINIHHILTPDCDVTNV---------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP 328 (433)
T ss_pred HHHHHHHHhcCCChhhccCCccccccc---------CCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccc
Confidence 988888788999999999877742110 1245653 367899999999999999752 899999 663
Q ss_pred cCCCCCCCcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecC-eEEEEEc
Q 011108 384 NWTDSPSTVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQG-LTLVTVR 462 (493)
Q Consensus 384 ~~~d~~~s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~-Ltf~tV~ 462 (493)
+.+...++.+.+..++.+++|||||+||.|.+||+.||++|+++|+|+++++|++|+.+++++||+++|++ |||++|+
T Consensus 329 -~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~ 407 (433)
T PLN03016 329 -YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIK 407 (433)
T ss_pred -cccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEc
Confidence 33223345666666666799999999999999999999999999999999999999999999999999986 9999999
Q ss_pred CCCccCcccChHHHHHHHHHHHcCCCC
Q 011108 463 GAGHLVPSDQPERALTLISSFLHGILP 489 (493)
Q Consensus 463 gAGH~vP~dqP~~al~l~~~fl~g~~~ 489 (493)
||||||| +||++|++||++||.|+++
T Consensus 408 ~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 408 AGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred CCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 9999998 7999999999999999865
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.1e-100 Score=805.00 Aligned_cols=398 Identities=42% Similarity=0.763 Sum_probs=331.2
Q ss_pred CCCCCCCCceeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCC-CccccCC
Q 011108 84 PGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDG-KTLFRNN 162 (493)
Q Consensus 84 Pg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~-~~l~~N~ 162 (493)
||...++++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|.|+|||+++.++ .++..|+
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 7877778999999999999878899999999999999999999999999999999 6999999999999553 6899999
Q ss_pred CCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHH
Q 011108 163 YAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTIL 242 (493)
Q Consensus 163 ~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~ 242 (493)
+||+++|||||||||+||||||+++..++.+ +++++|+|+++||+.|+.+||+|+++||||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999988776554 999999999999999999999999999999999999999999999999
Q ss_pred HcccCCCCceeeeeeeEecCCccCcccccchhhhhhhhccCCChhhhhchhcccccc-cCCCChHHHHHHHHHHHh----
Q 011108 243 LNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFA-REGNDTKECETFLEKASD---- 317 (493)
Q Consensus 243 ~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~-~~~~~~~~C~~~~~~~~~---- 317 (493)
++|+....+.||||||+||||++||..+..++.+|++.||+|+++.++.+.+.|... ........|..+.+.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 999876567899999999999999999999999999999999999999999998642 123567789888877765
Q ss_pred --hcCCCccccCCCCcCCCCCcCCCCCCCCCCCCCCchhHHHHHhChHHHHHHhccCC--C-CCcccC-cc-c--cCCCC
Q 011108 318 --EIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTDYYVEAYLNTREVQTVLHVKP--T-NWTACS-NL-F--NWTDS 388 (493)
Q Consensus 318 --~~g~in~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vq~ALhv~~--~-~w~~cs-~v-~--~~~d~ 388 (493)
..+++|+||++.+.|...... .......+++....+..|||+++||+||||+. . .|..|+ .+ . ...|.
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~ 315 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSRSS---YDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDF 315 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SHCT---TCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC
T ss_pred ccccCCcceeeeecccccccccc---ccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCcccccccccccc
Confidence 347999999998754311000 00012234455678999999999999999972 2 999999 66 2 34577
Q ss_pred CCCcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCccccee--CCccccEEEEecCeEEEEEcCCCc
Q 011108 389 PSTVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYT--NDEVGGYVEAYQGLTLVTVRGAGH 466 (493)
Q Consensus 389 ~~s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~--~~~v~Gy~~~y~~Ltf~tV~gAGH 466 (493)
+.++.+.+++||++++|||||+||.|.+||+.||++|+++|+|+++++|++|.. +++++||+|+|++|||++|+||||
T Consensus 316 ~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGH 395 (415)
T PF00450_consen 316 MPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGH 395 (415)
T ss_dssp -SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--S
T ss_pred cccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcc
Confidence 899999999999999999999999999999999999999999999999999987 899999999999999999999999
Q ss_pred cCcccChHHHHHHHHHHHcC
Q 011108 467 LVPSDQPERALTLISSFLHG 486 (493)
Q Consensus 467 ~vP~dqP~~al~l~~~fl~g 486 (493)
|||.|||+++++||++||+|
T Consensus 396 mvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 396 MVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp SHHHHSHHHHHHHHHHHHCT
T ss_pred cChhhCHHHHHHHHHHHhcC
Confidence 99999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.7e-94 Score=765.99 Aligned_cols=390 Identities=32% Similarity=0.609 Sum_probs=338.2
Q ss_pred cCCCCCCCCCceeEEEEEEecC-CCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCcccc
Q 011108 82 WLPGQPDGVDFDQYAGYVTVDP-KTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFR 160 (493)
Q Consensus 82 ~LPg~~~~~~~~~ysGyv~v~~-~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~ 160 (493)
++..-.++.++++|||||+|++ ..+++||||||||+++|+++||||||||||||||+ +|+|.|+|||+|+.++.++.+
T Consensus 35 ~~~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~ 113 (462)
T PTZ00472 35 GSGWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYN 113 (462)
T ss_pred CCCccccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeE
Confidence 3333335567899999999975 45789999999999999999999999999999999 699999999999999888999
Q ss_pred CCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHH
Q 011108 161 NNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 161 N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~ 240 (493)
|++||++.|||||||||+||||||++.. ++. .+++++|+|+++||+.|+++||+++.++|||+||||||||+|.+|.+
T Consensus 114 n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 114 NTYSWNNEAYVIYVDQPAGVGFSYADKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred CCcccccccCeEEEeCCCCcCcccCCCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 9999999999999999999999998653 454 37899999999999999999999999999999999999999999999
Q ss_pred HHHcccCCCCceeeeeeeEecCCccCcccccchhhhhhhh-------ccCCChhhhhchhc---cc-------ccccCCC
Q 011108 241 ILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWT-------HALNSDQTHKGIFT---YC-------DFAREGN 303 (493)
Q Consensus 241 I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~-------~gli~~~~~~~i~~---~C-------~~~~~~~ 303 (493)
|+++|+.....+||||||+||||++||..|..++.+|+|. +|+|++++++++.+ .| ... ...
T Consensus 192 i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~-~~~ 270 (462)
T PTZ00472 192 INMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSN-PDD 270 (462)
T ss_pred HHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhcccc-CCC
Confidence 9999976556789999999999999999999999999996 58999999988864 24 321 011
Q ss_pred ChHHHHHHHHHHHh-----hcCCCccccCCCCcCCCCCcCCCCCCCCCCCCCCch-hHHHHHhChHHHHHHhccCCCCCc
Q 011108 304 DTKECETFLEKASD-----EIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTD-YYVEAYLNTREVQTVLHVKPTNWT 377 (493)
Q Consensus 304 ~~~~C~~~~~~~~~-----~~g~in~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~-~~~~~ylN~~~Vq~ALhv~~~~w~ 377 (493)
....|..+...|.. ..+++|+|||+.+ |.. ++|.. ..+..|||+++||+||||+...|+
T Consensus 271 ~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~--------------~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~ 335 (462)
T PTZ00472 271 ADSSCSVARALCNEYIAVYSATGLNNYDIRKP-CIG--------------PLCYNMDNTIAFMNREDVQSSLGVKPATWQ 335 (462)
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCChhheecc-CCC--------------CCccCHHHHHHHhCCHHHHHHhCCCCCCce
Confidence 23346444433321 1367999999975 632 45754 478999999999999999855899
Q ss_pred ccC-cc-ccCC-CCCCCcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCC-----Ccccc-eeCCcccc
Q 011108 378 ACS-NL-FNWT-DSPSTVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEI-----PWYPW-YTNDEVGG 448 (493)
Q Consensus 378 ~cs-~v-~~~~-d~~~s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~-----~~~~w-~~~~~v~G 448 (493)
.|+ .| ..+. |.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| +.+++++|
T Consensus 336 ~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G 415 (462)
T PTZ00472 336 SCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAG 415 (462)
T ss_pred eCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEece
Confidence 999 76 4453 7778888999999999999999999999999999999999999999975 56899 56889999
Q ss_pred EEEEec-----CeEEEEEcCCCccCcccChHHHHHHHHHHHcCCCCC
Q 011108 449 YVEAYQ-----GLTLVTVRGAGHLVPSDQPERALTLISSFLHGILPP 490 (493)
Q Consensus 449 y~~~y~-----~Ltf~tV~gAGH~vP~dqP~~al~l~~~fl~g~~~p 490 (493)
|+|+|+ +|+|++|++||||||.|||+++++|+++|+.|+++.
T Consensus 416 ~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 416 LVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred EEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 999999 999999999999999999999999999999998763
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=2.2e-74 Score=586.82 Aligned_cols=309 Identities=29% Similarity=0.497 Sum_probs=266.9
Q ss_pred cccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC
Q 011108 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
+|||||||||+||||||+++..++. +|+++|+|++.||+.||++||+|+++||||+||||||||||+||++|+++|++
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 5899999999999999987665543 67778899999999999999999999999999999999999999999998876
Q ss_pred CCCceeeeeeeEecCCccCcccccchhhhhhhhccCCChhhhhchhccccccc--CCCChHHHHHHHHHHHhhcCCCccc
Q 011108 248 TKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR--EGNDTKECETFLEKASDEIGDIDIY 325 (493)
Q Consensus 248 ~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~--~~~~~~~C~~~~~~~~~~~g~in~Y 325 (493)
....+||||||+||||+++|..+..++.+|+|.||+|++++++.+.+.|.... .......|.++........+.+|+|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 55678999999999999999999999999999999999999999999997421 1134567999888877777899999
Q ss_pred cCCCCcCCCCCcCCCCCCCCCCCCCCch---hHHHHHhChHHHHHHhccCC---CCCcccC-ccccCCCCCCCcHHHHHH
Q 011108 326 NIYAPICINPAFQNGSIGSVHNYDPCTD---YYVEAYLNTREVQTVLHVKP---TNWTACS-NLFNWTDSPSTVLPTIKN 398 (493)
Q Consensus 326 ni~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vq~ALhv~~---~~w~~cs-~v~~~~d~~~s~~~~l~~ 398 (493)
|++.+.|..... ..+.|.. ..+..|||+++||+||||+. ..|..|| .+. +.....++.+.+.+
T Consensus 159 ~~~~~~~~~~~~---------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~-~~~d~~~~~~~~~~ 228 (319)
T PLN02213 159 HILTPDCDVTNV---------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP-YNHDIVSSIPYHMN 228 (319)
T ss_pred hcccCcccCccC---------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc-cccccccchHHHHH
Confidence 999776742110 1135652 36899999999999999974 2899999 663 33223345565566
Q ss_pred hhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecC-eEEEEEcCCCccCcccChHHHH
Q 011108 399 LIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQG-LTLVTVRGAGHLVPSDQPERAL 477 (493)
Q Consensus 399 Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~-Ltf~tV~gAGH~vP~dqP~~al 477 (493)
++..|+|||||+||.|++||+.||++|+++|+|+++++|++|+.+++++||+|+|++ |||++|+||||||| +||++|+
T Consensus 229 ~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al 307 (319)
T PLN02213 229 NSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETF 307 (319)
T ss_pred HHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHH
Confidence 666789999999999999999999999999999999999999999999999999986 99999999999998 7999999
Q ss_pred HHHHHHHcCCCC
Q 011108 478 TLISSFLHGILP 489 (493)
Q Consensus 478 ~l~~~fl~g~~~ 489 (493)
+||++||.++++
T Consensus 308 ~m~~~fi~~~~~ 319 (319)
T PLN02213 308 IMFQRWISGQPL 319 (319)
T ss_pred HHHHHHHcCCCC
Confidence 999999999864
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-65 Score=524.91 Aligned_cols=378 Identities=27% Similarity=0.514 Sum_probs=304.9
Q ss_pred CceeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccc-cCCCCccccc
Q 011108 91 DFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLF-RNNYAWNNVA 169 (493)
Q Consensus 91 ~~~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~-~N~~sWn~~a 169 (493)
+.++|+||.... -.+|||+||++++|.++|+++||||||||||+ +|+|.|+||+||+.+.+... .||+||+.++
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a 147 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFA 147 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCC
Confidence 356777773332 23999999999999999999999999999999 79999999999999842233 6999999999
Q ss_pred cEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCC--CEEEEeccccccchHHHHHHHHHcccC
Q 011108 170 NVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKR--DFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 170 nvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~--~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
||||||||+||||||+.. .+.. .+.....+|++.|+..|++.||+|.+. ++||+||||||||+|.||+.|+++|.
T Consensus 148 dLvFiDqPvGTGfS~a~~-~e~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~- 224 (498)
T COG2939 148 DLVFIDQPVGTGFSRALG-DEKK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNI- 224 (498)
T ss_pred ceEEEecCcccCcccccc-cccc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcc-
Confidence 999999999999999832 2233 366778999999999999999999887 99999999999999999999999873
Q ss_pred CCCceeeeeeeEecCC-ccCcccccchhhhhhhhc----cCCChhhhhchhccccccc---------CCCChHHHHHHHH
Q 011108 248 TKNTVINLKGIAIGNA-LIDGPTRSMGVYENLWTH----ALNSDQTHKGIFTYCDFAR---------EGNDTKECETFLE 313 (493)
Q Consensus 248 ~~~~~inLkGi~IGNg-~id~~~~~~~~~~~~~~~----gli~~~~~~~i~~~C~~~~---------~~~~~~~C~~~~~ 313 (493)
..+..+||++++|||| +|||..+...+..++..+ +..+.+.++++++.|.... .......|..+..
T Consensus 225 ~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~ 304 (498)
T COG2939 225 ALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASA 304 (498)
T ss_pred ccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHH
Confidence 2345899999999999 999999999999998754 4567778888888776531 1123345766655
Q ss_pred HHHhhc------CC---CccccCCCCcCCCCCcCCCCCCCCCCCCCCch--hHHHHHhChHHHHHHhccCCCCCcccC-c
Q 011108 314 KASDEI------GD---IDIYNIYAPICINPAFQNGSIGSVHNYDPCTD--YYVEAYLNTREVQTVLHVKPTNWTACS-N 381 (493)
Q Consensus 314 ~~~~~~------g~---in~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~--~~~~~ylN~~~Vq~ALhv~~~~w~~cs-~ 381 (493)
.+.... .+ +|.|+++. .|..... .-.|.+ .....|+|...+|+.+......|..|+ +
T Consensus 305 ~~~~~~~~~~~r~~~~~~n~y~~r~-~~~d~g~----------~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~ 373 (498)
T COG2939 305 YLTGLMREYVGRAGGRLLNVYDIRE-ECRDPGL----------GGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTD 373 (498)
T ss_pred HHHhcchhhhccccccccccccchh-hcCCCCc----------ccccccceeeccccccccchhccccccccchhccchH
Confidence 554321 23 88999987 3543211 013443 356788888889998888777899999 5
Q ss_pred c-ccC----CCCCCCcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcc-----ccee--CCccccE
Q 011108 382 L-FNW----TDSPSTVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWY-----PWYT--NDEVGGY 449 (493)
Q Consensus 382 v-~~~----~d~~~s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~-----~w~~--~~~v~Gy 449 (493)
+ .+| .+........+..++.+++.+++|.||.|.+|++.+++.|..+|+|.+...|. +|.. ..|..|-
T Consensus 374 a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~ 453 (498)
T COG2939 374 AMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGG 453 (498)
T ss_pred HHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhccc
Confidence 5 444 25556667788888999999999999999999999999999999999987553 4443 4566777
Q ss_pred EEEecCeEEEEEcCCCccCcccChHHHHHHHHHHHcCC
Q 011108 450 VEAYQGLTLVTVRGAGHLVPSDQPERALTLISSFLHGI 487 (493)
Q Consensus 450 ~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~fl~g~ 487 (493)
++++++++|+.++.||||||+|+|+.+++|++.|+.+.
T Consensus 454 ~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 454 YKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred ccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 77788999999999999999999999999999999873
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-65 Score=493.78 Aligned_cols=382 Identities=25% Similarity=0.419 Sum_probs=315.1
Q ss_pred eEEEEEEecCCCCceEEEEEEeCCCC-CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEE
Q 011108 94 QYAGYVTVDPKTGRSLFYYFAESPQN-SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVV 172 (493)
Q Consensus 94 ~ysGyv~v~~~~~~~lFy~f~es~~~-~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvL 172 (493)
+-.|||+|+ .+.++|+|++.+..+ ...+||.|||+||||.||.|||+|+|+||...+ +++|+.+|.+.|+||
T Consensus 3 ~~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adll 75 (414)
T KOG1283|consen 3 EDWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLL 75 (414)
T ss_pred ccccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEE
Confidence 347999997 469999999998754 488999999999999999999999999998765 558999999999999
Q ss_pred EEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCce
Q 011108 173 FLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTV 252 (493)
Q Consensus 173 fiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~ 252 (493)
|||.|||+||||.+..+.|. ++++++|.|+.+.|+.||..+|||+.+||||+-|||||+.++.+|..+.+..+. ++..
T Consensus 76 fvDnPVGaGfSyVdg~~~Y~-~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~-G~i~ 153 (414)
T KOG1283|consen 76 FVDNPVGAGFSYVDGSSAYT-TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR-GEIK 153 (414)
T ss_pred EecCCCcCceeeecCccccc-ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc-Ccee
Confidence 99999999999998887666 499999999999999999999999999999999999999999999998877765 4578
Q ss_pred eeeeeeEecCCccCcccccchhhhhhhhccCCChhhhhchhc---ccccccC----CCChHHHHHHHHHHHhhcCCCccc
Q 011108 253 INLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFT---YCDFARE----GNDTKECETFLEKASDEIGDIDIY 325 (493)
Q Consensus 253 inLkGi~IGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~---~C~~~~~----~~~~~~C~~~~~~~~~~~g~in~Y 325 (493)
.|+.|+++|+.||+|..-..++..|++..+++++...+.+.+ .|....+ ..++......-+.+.++..++|.|
T Consensus 154 ~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfY 233 (414)
T KOG1283|consen 154 LNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFY 233 (414)
T ss_pred ecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCccee
Confidence 999999999999999999999999999999999998877654 3432111 112222223334455666789999
Q ss_pred cCCCCcCCCCCcCC-----CCCCC----CCCC-CCCchhHHHHHhChHHHHHHhccCCC--CCcccC-cc-cc-CCCCCC
Q 011108 326 NIYAPICINPAFQN-----GSIGS----VHNY-DPCTDYYVEAYLNTREVQTVLHVKPT--NWTACS-NL-FN-WTDSPS 390 (493)
Q Consensus 326 ni~~~~C~~~~~~~-----~~~~~----~~~~-dpc~~~~~~~ylN~~~Vq~ALhv~~~--~w~~cs-~v-~~-~~d~~~ 390 (493)
||.++.-....... .++.+ .... -+-..+.+..+||-| |+++|++.++ .|-..+ .+ .+ ..|+|.
T Consensus 234 Nil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~~wGgqsg~vFt~lq~dFMK 312 (414)
T KOG1283|consen 234 NILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGVKWGGQSGDVFTKLQGDFMK 312 (414)
T ss_pred eeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCCCcccCcCCchHHHhhhhhcc
Confidence 99887554332111 01100 0011 111234588899877 8999999876 899988 55 33 359999
Q ss_pred CcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcc--cc---eeCCccccEEEEecCeEEEEEcCCC
Q 011108 391 TVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWY--PW---YTNDEVGGYVEAYQGLTLVTVRGAG 465 (493)
Q Consensus 391 s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~--~w---~~~~~v~Gy~~~y~~Ltf~tV~gAG 465 (493)
++...+.+||++|+.|.||+|++|.||.+.|+++|+..|+|+.+..+. +| +++-..+||.+.|+||.|.+|..||
T Consensus 313 Pvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilrag 392 (414)
T KOG1283|consen 313 PVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAG 392 (414)
T ss_pred cHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeeccc
Confidence 999999999999999999999999999999999999999999998654 34 4567899999999999999999999
Q ss_pred ccCcccChHHHHHHHHHHHc
Q 011108 466 HLVPSDQPERALTLISSFLH 485 (493)
Q Consensus 466 H~vP~dqP~~al~l~~~fl~ 485 (493)
||||.|+|+.|.+|++.+.+
T Consensus 393 hmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 393 HMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred CcccCCCHHHHhhheeeccc
Confidence 99999999999999987653
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.51 E-value=3e-12 Score=125.13 Aligned_cols=131 Identities=25% Similarity=0.320 Sum_probs=84.4
Q ss_pred eEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEE
Q 011108 94 QYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVF 173 (493)
Q Consensus 94 ~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLf 173 (493)
+..++++++. ..+.|.-+.. +..+|.||+++||||+++..+..+.+. +.. +-.+|+.
T Consensus 2 ~~~~~~~~~~---~~~~~~~~~~---~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~~------~g~~vi~ 58 (288)
T TIGR01250 2 QIEGIITVDG---GYHLFTKTGG---EGEKIKLLLLHGGPGMSHEYLENLREL-----------LKE------EGREVIM 58 (288)
T ss_pred CccceecCCC---CeEEEEeccC---CCCCCeEEEEcCCCCccHHHHHHHHHH-----------HHh------cCCEEEE
Confidence 4566777753 3344443322 234688999999999987533333321 111 2488999
Q ss_pred EeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCcee
Q 011108 174 LESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVI 253 (493)
Q Consensus 174 iDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~i 253 (493)
+|. .|.|.|......+-. .+.+..++|+..++. ++..++++|.|+|+||..+..+|..- +.
T Consensus 59 ~d~-~G~G~s~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~liG~S~Gg~ia~~~a~~~----------p~ 119 (288)
T TIGR01250 59 YDQ-LGCGYSDQPDDSDEL-WTIDYFVDELEEVRE-------KLGLDKFYLLGHSWGGMLAQEYALKY----------GQ 119 (288)
T ss_pred EcC-CCCCCCCCCCccccc-ccHHHHHHHHHHHHH-------HcCCCcEEEEEeehHHHHHHHHHHhC----------cc
Confidence 995 699998643222200 255677777666544 24456799999999999999888643 34
Q ss_pred eeeeeEecCCccC
Q 011108 254 NLKGIAIGNALID 266 (493)
Q Consensus 254 nLkGi~IGNg~id 266 (493)
.++++++.++...
T Consensus 120 ~v~~lvl~~~~~~ 132 (288)
T TIGR01250 120 HLKGLIISSMLDS 132 (288)
T ss_pred ccceeeEeccccc
Confidence 5889988887654
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.45 E-value=3.1e-12 Score=123.22 Aligned_cols=116 Identities=21% Similarity=0.241 Sum_probs=79.5
Q ss_pred EEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCC
Q 011108 110 FYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKS 189 (493)
Q Consensus 110 Fy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~ 189 (493)
+|..+..+ ..+.|+||++||.+|.+.. +..+.+ .+.+..+++.+| ..|.|.|......
T Consensus 2 ~~~~~~~~--~~~~~~iv~lhG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D-~~G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGPP--DADAPVVVLSSGLGGSGSY-WAPQLD------------------VLTQRFHVVTYD-HRGTGRSPGELPP 59 (257)
T ss_pred EEEEecCC--CCCCCEEEEEcCCCcchhH-HHHHHH------------------HHHhccEEEEEc-CCCCCCCCCCCcc
Confidence 45555432 2467999999998776655 543332 112357999999 5799999654333
Q ss_pred CCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 190 DYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 190 ~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
.+ +.++.++|+.+++.. ++..+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 60 ~~---~~~~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCCC
Confidence 22 556677777766642 344689999999999999998875422 38888888887654
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.41 E-value=7.5e-11 Score=118.84 Aligned_cols=142 Identities=23% Similarity=0.272 Sum_probs=94.6
Q ss_pred cccCccccCCCCCCCCCceeEEEEEEecCCCCc--eEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEc
Q 011108 75 MLADKIKWLPGQPDGVDFDQYAGYVTVDPKTGR--SLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVN 152 (493)
Q Consensus 75 ~~~~~v~~LPg~~~~~~~~~ysGyv~v~~~~~~--~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~ 152 (493)
....++.+||..|.. -.|+.|+...|+ .++|.-. .++ +.|.||.+||.|+.+.. |..+.+
T Consensus 6 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~-w~~~~~------- 67 (302)
T PRK00870 6 TPDSRFENLPDYPFA------PHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYL-YRKMIP------- 67 (302)
T ss_pred CCcccccCCcCCCCC------ceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhh-HHHHHH-------
Confidence 345678899988752 457888865554 4665532 222 46889999999877666 544331
Q ss_pred CCCCccccCCCCccccccEEEEeCCCCcccccCCCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccc
Q 011108 153 KDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAG 231 (493)
Q Consensus 153 ~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG 231 (493)
.|.. +..+|+.+| ..|.|.|-.... .++ +.++.++|+.++|. ++...++.|.|||+||
T Consensus 68 ----~L~~------~gy~vi~~D-l~G~G~S~~~~~~~~~---~~~~~a~~l~~~l~-------~l~~~~v~lvGhS~Gg 126 (302)
T PRK00870 68 ----ILAA------AGHRVIAPD-LIGFGRSDKPTRREDY---TYARHVEWMRSWFE-------QLDLTDVTLVCQDWGG 126 (302)
T ss_pred ----HHHh------CCCEEEEEC-CCCCCCCCCCCCcccC---CHHHHHHHHHHHHH-------HcCCCCEEEEEEChHH
Confidence 1111 358999999 589999843211 122 55667777766665 2445689999999999
Q ss_pred cchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 232 HYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 232 ~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
..+-.+|.+. +-.++++++.++.+
T Consensus 127 ~ia~~~a~~~----------p~~v~~lvl~~~~~ 150 (302)
T PRK00870 127 LIGLRLAAEH----------PDRFARLVVANTGL 150 (302)
T ss_pred HHHHHHHHhC----------hhheeEEEEeCCCC
Confidence 9998888653 23488888887643
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.37 E-value=5.1e-11 Score=116.99 Aligned_cols=108 Identities=19% Similarity=0.138 Sum_probs=75.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHH
Q 011108 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (493)
.+.|.||++||.+|.+.. |..+.+ .| .+.++|+.+| ..|.|.|.......+ +-+..|
T Consensus 26 ~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D-~~G~G~S~~~~~~~~---~~~~~~ 82 (278)
T TIGR03056 26 TAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPD-LPGHGFTRAPFRFRF---TLPSMA 82 (278)
T ss_pred CCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeec-CCCCCCCCCccccCC---CHHHHH
Confidence 456999999999776655 543332 12 2247899999 589999864332222 667778
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 201 ~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
+|+.++++. +..++++|+|+|+||..+..+|.+. +..++++++.++..++.
T Consensus 83 ~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 83 EDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG----------PVTPRMVVGINAALMPF 133 (278)
T ss_pred HHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC----------CcccceEEEEcCccccc
Confidence 887776652 3346889999999999888887643 33478999988876643
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.36 E-value=1.8e-11 Score=119.21 Aligned_cols=104 Identities=17% Similarity=0.149 Sum_probs=76.7
Q ss_pred CCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChH
Q 011108 118 QNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDK 197 (493)
Q Consensus 118 ~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~ 197 (493)
+.+.++|.||++||.+|.+.. ++.+.+ .+.+..+|+.+|. .|.|.|... ..+ +.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D~-~G~G~s~~~--~~~---~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR------------------DLVNDHDIIQVDM-RNHGLSPRD--PVM---NYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH------------------HHhhCCeEEEECC-CCCCCCCCC--CCC---CHH
Confidence 456778999999999888776 554443 1224579999995 799988643 222 667
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
+.++|+.++|.. +..++++|.|+|+||..+..+|.+. +..++++++.++
T Consensus 66 ~~~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~----------~~~v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALA----------PDRIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhC----------HhhcceEEEEec
Confidence 789998887763 3446799999999999999988663 233888888763
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=99.35 E-value=1.2e-10 Score=115.37 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=86.2
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccc-cccEEEEeCCCCcccc
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGFS 183 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~-~anvLfiDqP~GvGfS 183 (493)
.|..|+|.+++.. +..+|+||.+||.+++|.. |-.+.+ .+.+ -..++.+| ..|.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D-~~G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHD-HIGHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEcc-CCCCCCC
Confidence 5778999888774 2456999999999766655 533332 1333 37899999 6999999
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
-.+... . .+-....+|+..+|....++ +...+++|+|+|+||..+..+|.+- +-+++|+++.+|
T Consensus 67 ~~~~~~-~--~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~~----------p~~i~~lil~~p 130 (276)
T PHA02857 67 NGEKMM-I--DDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYKN----------PNLFTAMILMSP 130 (276)
T ss_pred CCccCC-c--CCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHhC----------ccccceEEEecc
Confidence 643211 1 13345577877777655444 3457899999999998777777432 335899999998
Q ss_pred ccCc
Q 011108 264 LIDG 267 (493)
Q Consensus 264 ~id~ 267 (493)
.+++
T Consensus 131 ~~~~ 134 (276)
T PHA02857 131 LVNA 134 (276)
T ss_pred cccc
Confidence 7763
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.33 E-value=5.3e-11 Score=119.24 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=84.7
Q ss_pred EEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCC
Q 011108 98 YVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESP 177 (493)
Q Consensus 98 yv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP 177 (493)
|++++ +.+++|.-.. + ..|.||+|||.++.+.+ +-.+.+ . +.+.++|+.+| .
T Consensus 12 ~~~~~---~~~i~y~~~G---~--~~~~vlllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~D-l 63 (294)
T PLN02824 12 TWRWK---GYNIRYQRAG---T--SGPALVLVHGFGGNADH-WRKNTP-----------V-------LAKSHRVYAID-L 63 (294)
T ss_pred eEEEc---CeEEEEEEcC---C--CCCeEEEECCCCCChhH-HHHHHH-----------H-------HHhCCeEEEEc-C
Confidence 66664 4556654321 1 23789999999888877 655443 1 23456999999 6
Q ss_pred CCcccccCCCCCCC---ccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceee
Q 011108 178 AGVGFSYSSTKSDY---ELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (493)
Q Consensus 178 ~GvGfSy~~~~~~~---~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~in 254 (493)
.|.|.|...+..+. ...+.++.|+|+.++|.+ +..++++|.|+|+||..+-.+|.+. +..
T Consensus 64 pG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~----------p~~ 126 (294)
T PLN02824 64 LGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD-------VVGDPAFVICNSVGGVVGLQAAVDA----------PEL 126 (294)
T ss_pred CCCCCCCCCccccccccccCCHHHHHHHHHHHHHH-------hcCCCeEEEEeCHHHHHHHHHHHhC----------hhh
Confidence 99999975432110 012667788888777763 3457899999999999998888654 334
Q ss_pred eeeeEecCCcc
Q 011108 255 LKGIAIGNALI 265 (493)
Q Consensus 255 LkGi~IGNg~i 265 (493)
++++++.|+..
T Consensus 127 v~~lili~~~~ 137 (294)
T PLN02824 127 VRGVMLINISL 137 (294)
T ss_pred eeEEEEECCCc
Confidence 89999998765
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.29 E-value=2.2e-10 Score=114.92 Aligned_cols=121 Identities=19% Similarity=0.256 Sum_probs=75.8
Q ss_pred EEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEe
Q 011108 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLE 175 (493)
Q Consensus 96 sGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiD 175 (493)
+.+++++ +..++|.- . . +.|.||.|||.|..+.. +-.+.+ .+.+.++|+.+|
T Consensus 16 ~~~~~~~---~~~i~y~~--~-G---~~~~iv~lHG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D 67 (286)
T PRK03204 16 SRWFDSS---RGRIHYID--E-G---TGPPILLCHGNPTWSFL-YRDIIV------------------ALRDRFRCVAPD 67 (286)
T ss_pred ceEEEcC---CcEEEEEE--C-C---CCCEEEEECCCCccHHH-HHHHHH------------------HHhCCcEEEEEC
Confidence 4577775 34565542 1 1 25789999999744333 432221 123458999999
Q ss_pred CCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeee
Q 011108 176 SPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (493)
Q Consensus 176 qP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inL 255 (493)
..|.|.|-.....++ +.+..++++..++. . +...+++|+|+|+||..+-.+|.+- +..+
T Consensus 68 -~~G~G~S~~~~~~~~---~~~~~~~~~~~~~~----~---~~~~~~~lvG~S~Gg~va~~~a~~~----------p~~v 126 (286)
T PRK03204 68 -YLGFGLSERPSGFGY---QIDEHARVIGEFVD----H---LGLDRYLSMGQDWGGPISMAVAVER----------ADRV 126 (286)
T ss_pred -CCCCCCCCCCCcccc---CHHHHHHHHHHHHH----H---hCCCCEEEEEECccHHHHHHHHHhC----------hhhe
Confidence 579999853222122 44556666655554 2 3446899999999998766665432 3458
Q ss_pred eeeEecCCcc
Q 011108 256 KGIAIGNALI 265 (493)
Q Consensus 256 kGi~IGNg~i 265 (493)
++++++++..
T Consensus 127 ~~lvl~~~~~ 136 (286)
T PRK03204 127 RGVVLGNTWF 136 (286)
T ss_pred eEEEEECccc
Confidence 9999988754
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.29 E-value=7e-10 Score=109.82 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=53.9
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHH
Q 011108 401 ASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLI 480 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~ 480 (493)
+..+||+++.|..|.++|....+.+.+.+. +.+++.|++|||+++.++|+...+++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i 276 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLV 276 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHH
Confidence 457999999999999999887777776654 56889999999999999999999999
Q ss_pred HHHHc
Q 011108 481 SSFLH 485 (493)
Q Consensus 481 ~~fl~ 485 (493)
..||.
T Consensus 277 ~~fl~ 281 (282)
T TIGR03343 277 IDFLR 281 (282)
T ss_pred HHHhh
Confidence 99985
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.23 E-value=5.1e-10 Score=115.44 Aligned_cols=128 Identities=12% Similarity=0.150 Sum_probs=84.5
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccc-cccEEEEeCCCCcccc
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGFS 183 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~-~anvLfiDqP~GvGfS 183 (493)
.|..|||......+ ...+|+||++||..+.++.-+-.+.+ .+.+ -.+|+-+|. .|.|.|
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~-~G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDY-PGFGLS 129 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecC-CCCCCC
Confidence 46789887765432 24679999999986554431111110 1232 478999996 799998
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
-... .+. .+-+..++|+.+++.. +..-+++...+++|.|+|+||..+..+|.+- +-.++|+++.+|
T Consensus 130 ~~~~--~~~-~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~~----------p~~v~glVLi~p 195 (349)
T PLN02385 130 EGLH--GYI-PSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ----------PNAWDGAILVAP 195 (349)
T ss_pred CCCC--CCc-CCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHhC----------cchhhheeEecc
Confidence 6432 221 1556778888887764 3333456667899999999999887776542 334899999988
Q ss_pred ccC
Q 011108 264 LID 266 (493)
Q Consensus 264 ~id 266 (493)
...
T Consensus 196 ~~~ 198 (349)
T PLN02385 196 MCK 198 (349)
T ss_pred ccc
Confidence 654
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.22 E-value=9.6e-10 Score=112.25 Aligned_cols=137 Identities=17% Similarity=0.181 Sum_probs=86.8
Q ss_pred EEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccc-cccEEEE
Q 011108 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFL 174 (493)
Q Consensus 96 sGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~-~anvLfi 174 (493)
.++++.. .|..|+|+.+........+|+||++||..+.++..+-.+. ..+++ -.+|+.+
T Consensus 34 ~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~------------------~~L~~~Gy~V~~~ 93 (330)
T PLN02298 34 KSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA------------------IFLAQMGFACFAL 93 (330)
T ss_pred cceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH------------------HHHHhCCCEEEEe
Confidence 4555553 4688998765432222457899999998433321110000 11333 4899999
Q ss_pred eCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceee
Q 011108 175 ESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (493)
Q Consensus 175 DqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~in 254 (493)
|. .|.|.|-... .+. .+.+..++|+..++.....+ .++...+++|+|+|+||..+..+|.+- +-.
T Consensus 94 D~-rGhG~S~~~~--~~~-~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~~----------p~~ 158 (330)
T PLN02298 94 DL-EGHGRSEGLR--AYV-PNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLAN----------PEG 158 (330)
T ss_pred cC-CCCCCCCCcc--ccC-CCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhcC----------ccc
Confidence 95 8999985321 221 15567889998887654432 234456899999999999877665421 334
Q ss_pred eeeeEecCCccCc
Q 011108 255 LKGIAIGNALIDG 267 (493)
Q Consensus 255 LkGi~IGNg~id~ 267 (493)
++|+++.+++.+.
T Consensus 159 v~~lvl~~~~~~~ 171 (330)
T PLN02298 159 FDGAVLVAPMCKI 171 (330)
T ss_pred ceeEEEecccccC
Confidence 9999999887653
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.22 E-value=1.1e-09 Score=104.27 Aligned_cols=61 Identities=30% Similarity=0.472 Sum_probs=53.0
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHH
Q 011108 401 ASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLI 480 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~ 480 (493)
+..+||++.+|+.|.++|....+.+.+.+. +.+++.++++||+++.++|+...+.+
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHH
Confidence 346999999999999999987777766654 44789999999999999999999999
Q ss_pred HHHHc
Q 011108 481 SSFLH 485 (493)
Q Consensus 481 ~~fl~ 485 (493)
..|+.
T Consensus 247 ~~fl~ 251 (251)
T TIGR02427 247 RDFLR 251 (251)
T ss_pred HHHhC
Confidence 99974
No 21
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.19 E-value=1.1e-09 Score=107.36 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=53.3
Q ss_pred hhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHH
Q 011108 400 IASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTL 479 (493)
Q Consensus 400 l~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l 479 (493)
-+..+||+|+.|+.|.++|....+...+.+. +..++.++++||+++.++|+.....
T Consensus 193 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~------------------------~~~~~~i~~~gH~~~~e~p~~f~~~ 248 (256)
T PRK10349 193 QNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP------------------------HSESYIFAKAAHAPFISHPAEFCHL 248 (256)
T ss_pred hhcCCCeEEEecCCCccCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHH
Confidence 3457999999999999999887765555543 5688999999999999999999999
Q ss_pred HHHHHcC
Q 011108 480 ISSFLHG 486 (493)
Q Consensus 480 ~~~fl~g 486 (493)
+.+|-..
T Consensus 249 l~~~~~~ 255 (256)
T PRK10349 249 LVALKQR 255 (256)
T ss_pred HHHHhcc
Confidence 9998653
No 22
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.16 E-value=2.1e-09 Score=111.65 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=70.2
Q ss_pred CCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHH
Q 011108 122 TNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQ 201 (493)
Q Consensus 122 ~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~ 201 (493)
+.|.||.|||.|+.+.. |..+.+ ...+..+|+.+| ..|.|.|-.....++ +.+..++
T Consensus 87 ~gp~lvllHG~~~~~~~-w~~~~~------------------~L~~~~~via~D-l~G~G~S~~~~~~~~---~~~~~a~ 143 (360)
T PLN02679 87 SGPPVLLVHGFGASIPH-WRRNIG------------------VLAKNYTVYAID-LLGFGASDKPPGFSY---TMETWAE 143 (360)
T ss_pred CCCeEEEECCCCCCHHH-HHHHHH------------------HHhcCCEEEEEC-CCCCCCCCCCCCccc---cHHHHHH
Confidence 44788999999877665 543332 112357999999 589999854322222 5567788
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 202 d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
|+.++|.. +...+++|.|+|+||..+-.+|..- + +-.++|+++.|+..
T Consensus 144 ~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~-------P~rV~~LVLi~~~~ 191 (360)
T PLN02679 144 LILDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--T-------RDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--C-------hhhcCEEEEECCcc
Confidence 87777763 3446899999999997665555321 1 23489999888653
No 23
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.16 E-value=9.4e-10 Score=110.26 Aligned_cols=115 Identities=17% Similarity=0.216 Sum_probs=80.5
Q ss_pred CceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccC
Q 011108 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (493)
Q Consensus 106 ~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~ 185 (493)
|..++|.-.- +.|.||++||.|+.+.. +-.+.+ .+.+...|+-+| ..|.|+|..
T Consensus 16 g~~i~y~~~G------~g~~vvllHG~~~~~~~-w~~~~~------------------~L~~~~~via~D-~~G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIETG------EGDPIVFLHGNPTSSYL-WRNIIP------------------HLAGLGRCLAPD-LIGMGASDK 69 (295)
T ss_pred CEEEEEEEeC------CCCEEEEECCCCCCHHH-HHHHHH------------------HHhhCCEEEEEc-CCCCCCCCC
Confidence 4566665321 35789999999987776 543332 123345899999 589999964
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
.. .++ +.+..|+|+..++.. +...+++|.|+|+||.++-.+|.+. +-.++++++.|+..
T Consensus 70 ~~-~~~---~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lil~~~~~ 128 (295)
T PRK03592 70 PD-IDY---TFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARH----------PDRVRGIAFMEAIV 128 (295)
T ss_pred CC-CCC---CHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhC----------hhheeEEEEECCCC
Confidence 32 223 567778887776653 3457899999999999888888654 33489999999865
Q ss_pred Cc
Q 011108 266 DG 267 (493)
Q Consensus 266 d~ 267 (493)
.+
T Consensus 129 ~~ 130 (295)
T PRK03592 129 RP 130 (295)
T ss_pred CC
Confidence 44
No 24
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.12 E-value=2.8e-10 Score=106.36 Aligned_cols=104 Identities=21% Similarity=0.242 Sum_probs=73.7
Q ss_pred EEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHH
Q 011108 126 LLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYT 205 (493)
Q Consensus 126 vlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~ 205 (493)
||.+||++|.+.. +..+.+ .| .+..+|+.+|. .|.|.|-.... +...+-++.++|+.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~-~G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDL-PGHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEEC-TTSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEec-CCccccccccc--cCCcchhhhhhhhhh
Confidence 7899999888866 544443 12 15678999995 79999975432 111255667777766
Q ss_pred HHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 206 FLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 206 fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
+|. . +..++++|.|+|+||.++..+|.+. +-.++|+++.++.....
T Consensus 59 ~l~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LLD----A---LGIKKVILVGHSMGGMIALRLAARY----------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHH----H---TTTSSEEEEEETHHHHHHHHHHHHS----------GGGEEEEEEESESSSHH
T ss_pred ccc----c---ccccccccccccccccccccccccc----------ccccccceeeccccccc
Confidence 655 3 3337899999999999999888664 33599999999888654
No 25
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.11 E-value=6.1e-09 Score=103.47 Aligned_cols=117 Identities=20% Similarity=0.141 Sum_probs=79.7
Q ss_pred CceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccC
Q 011108 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (493)
Q Consensus 106 ~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~ 185 (493)
|..+.|+..+. + ..+|.||++||-++.+.. +..+.+ .| .+..+|+.+| ..|.|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~D-l~G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIE-----------AL-------DPDLEVIAFD-VPGVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHH-----------Hh-------ccCceEEEEC-CCCCCCCCC
Confidence 45677876542 1 245678999986555554 533332 11 2457999999 699999953
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
. ..++ +.+..++|+.+|+.. +..++++|.|+|+||..+-.+|.+- +..++++++.|+..
T Consensus 68 ~-~~~~---~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~----------p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 68 P-RHPY---RFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDY----------PERCKKLILAATAA 126 (276)
T ss_pred C-CCcC---cHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHC----------HHHhhheEEeccCC
Confidence 2 2222 556677777776663 3446899999999999888888653 23499999999876
Q ss_pred C
Q 011108 266 D 266 (493)
Q Consensus 266 d 266 (493)
.
T Consensus 127 ~ 127 (276)
T TIGR02240 127 G 127 (276)
T ss_pred c
Confidence 4
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.09 E-value=4.1e-09 Score=100.12 Aligned_cols=60 Identities=20% Similarity=0.198 Sum_probs=52.0
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHH
Q 011108 401 ASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLI 480 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~ 480 (493)
+-..||+|.+|+.|.++|....+.+.+.+. +-++..+.++||+++.++|+...+.+
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i 241 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP------------------------HSELYIFAKAAHAPFLSHAEAFCALL 241 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHH
Confidence 447999999999999999888777666543 44788999999999999999999999
Q ss_pred HHHH
Q 011108 481 SSFL 484 (493)
Q Consensus 481 ~~fl 484 (493)
..|+
T Consensus 242 ~~fi 245 (245)
T TIGR01738 242 VAFK 245 (245)
T ss_pred HhhC
Confidence 9986
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.05 E-value=1.5e-09 Score=105.02 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=70.5
Q ss_pred CCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHH
Q 011108 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (493)
Q Consensus 123 ~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (493)
+|.||++||.||.+.. |-.+.+ .. +.++|+.+| ..|.|.|..... .+-+..|+|
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~----------------~l---~~~~vi~~D-~~G~G~S~~~~~-----~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE----------------AL---PDYPRLYID-LPGHGGSAAISV-----DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH----------------Hc---CCCCEEEec-CCCCCCCCCccc-----cCHHHHHHH
Confidence 6889999999888766 643331 11 248999999 799999953221 155567777
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 203 ~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
+.++|. ++...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 56 l~~~l~-------~~~~~~~~lvG~S~Gg~va~~~a~~~~~---------~~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQ-------SYNILPYWLVGYSLGGRIAMYYACQGLA---------GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHH-------HcCCCCeEEEEECHHHHHHHHHHHhCCc---------ccccEEEEeCCC
Confidence 666665 3456799999999999998888876311 127788887654
No 28
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.04 E-value=1.6e-08 Score=101.36 Aligned_cols=138 Identities=18% Similarity=0.191 Sum_probs=94.7
Q ss_pred ceeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccE
Q 011108 92 FDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANV 171 (493)
Q Consensus 92 ~~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anv 171 (493)
.....+|++++ | +++++.|. .+++.|++|.|||=|=.+=. + |- ....|.. +-..+
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wys-w---------r~--q~~~la~------~~~rv 74 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYS-W---------RH--QIPGLAS------RGYRV 74 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchh-h---------hh--hhhhhhh------cceEE
Confidence 45668889885 2 88999988 67899999999998855433 1 00 0000110 12789
Q ss_pred EEEeCCCCcccccCCCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCC
Q 011108 172 VFLESPAGVGFSYSSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN 250 (493)
Q Consensus 172 LfiDqP~GvGfSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~ 250 (493)
+.+|. .|-|+|-.... ++| +....++|+..+|. .+...++++.||+||+..+=.+|....++.+.
T Consensus 75 iA~Dl-rGyG~Sd~P~~~~~Y---t~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~--- 140 (322)
T KOG4178|consen 75 IAPDL-RGYGFSDAPPHISEY---TIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPERVDG--- 140 (322)
T ss_pred EecCC-CCCCCCCCCCCccee---eHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhhcce---
Confidence 99995 99999987655 444 66778888777666 45677999999999999999999877555332
Q ss_pred ceeeeeeeEecCCccCcccc
Q 011108 251 TVINLKGIAIGNALIDGPTR 270 (493)
Q Consensus 251 ~~inLkGi~IGNg~id~~~~ 270 (493)
.+++.+... ||..+|...
T Consensus 141 -lv~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 141 -LVTLNVPFP-NPKLKPLDS 158 (322)
T ss_pred -EEEecCCCC-Ccccchhhh
Confidence 344444444 566655543
No 29
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.04 E-value=1.1e-08 Score=107.02 Aligned_cols=131 Identities=16% Similarity=0.080 Sum_probs=83.0
Q ss_pred eeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEE
Q 011108 93 DQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVV 172 (493)
Q Consensus 93 ~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvL 172 (493)
++-+|+.... .+-.+||.- . .+...|.||.|||.|+.+.. |-.+.+ .| .+..+|+
T Consensus 103 ~~~~~~~~~~--~~~~~~y~~--~--G~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~~Vi 157 (383)
T PLN03084 103 KMGAQSQASS--DLFRWFCVE--S--GSNNNPPVLLIHGFPSQAYS-YRKVLP-----------VL-------SKNYHAI 157 (383)
T ss_pred cccceeEEcC--CceEEEEEe--c--CCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hcCCEEE
Confidence 3334555532 345555442 2 23456899999999877665 543332 12 2357999
Q ss_pred EEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCce
Q 011108 173 FLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTV 252 (493)
Q Consensus 173 fiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~ 252 (493)
-+| ..|.|+|.......-...+-+..++|+..|+.. +...+++|+|+|+||..+-.+|.+. +
T Consensus 158 a~D-lpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~----------P 219 (383)
T PLN03084 158 AFD-WLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAH----------P 219 (383)
T ss_pred EEC-CCCCCCCCCCcccccccCCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhC----------h
Confidence 999 689999965432100012566777887777763 3446899999999997665555432 3
Q ss_pred eeeeeeEecCCccC
Q 011108 253 INLKGIAIGNALID 266 (493)
Q Consensus 253 inLkGi~IGNg~id 266 (493)
-.++++++.|+...
T Consensus 220 ~~v~~lILi~~~~~ 233 (383)
T PLN03084 220 DKIKKLILLNPPLT 233 (383)
T ss_pred HhhcEEEEECCCCc
Confidence 34899999998653
No 30
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.02 E-value=1.7e-08 Score=104.11 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHH
Q 011108 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (493)
.+.|.||++||.+|++.. +..+.+ .| .+..+|+-+| ..|.|.|-..... .+.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d-~~g~G~s~~~~~~----~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHA-----------AL-------AAGRPVIALD-LPGHGASSKAVGA----GSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHH-----------HH-------hcCCEEEEEc-CCCCCCCCCCCCC----CCHHHHH
Confidence 456899999999887776 544443 12 1237899999 5799998432111 2555666
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 201 ~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
+++..++. ++...+++|.|+|+||..+..+|.+- +..++++++.++.
T Consensus 185 ~~~~~~~~-------~~~~~~~~lvG~S~Gg~~a~~~a~~~----------~~~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFLD-------ALGIERAHLVGHSMGGAVALRLAARA----------PQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHH-------hcCCccEEEEeechHHHHHHHHHHhC----------chheeEEEEECcC
Confidence 66665554 34556899999999999999888652 2337777776654
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.01 E-value=1.3e-08 Score=96.47 Aligned_cols=105 Identities=22% Similarity=0.289 Sum_probs=68.6
Q ss_pred CCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHH
Q 011108 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (493)
Q Consensus 123 ~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (493)
+|+||.+||.+|.+.. |-.+.+ ..+ +-.+|+-+| ..|.|.|.... +....+.++.++|
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~----------------~L~--~~~~v~~~d-~~g~G~s~~~~--~~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE----------------LLG--PHFRCLAID-LPGHGSSQSPD--EIERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH----------------Hhc--ccCeEEEEc-CCCCCCCCCCC--ccChhhHHHHHHH
Confidence 4889999998877665 432221 112 347999999 57999985422 1111144455555
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 203 ~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
+ +..+.++ +..++++|.|+|+||..+..+|.+. +..++++++.++..
T Consensus 59 ~---~~~~~~~---~~~~~~~l~G~S~Gg~ia~~~a~~~----------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQ---LGIEPFFLVGYSMGGRIALYYALQY----------PERVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHH---cCCCeEEEEEeccHHHHHHHHHHhC----------chheeeeEEecCCC
Confidence 2 2333333 3457899999999999999888764 23488888887654
No 32
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.01 E-value=1.2e-08 Score=107.17 Aligned_cols=130 Identities=18% Similarity=0.164 Sum_probs=86.8
Q ss_pred CCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccc
Q 011108 104 KTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFS 183 (493)
Q Consensus 104 ~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfS 183 (493)
..+..+|++.++... ...+|+||++||.++.+.. |-.+.+ .+. .+-++|+-+|. .|.|.|
T Consensus 118 ~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~-----------~L~------~~Gy~V~~~D~-rGhG~S 177 (395)
T PLN02652 118 ARRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAK-----------QLT------SCGFGVYAMDW-IGHGGS 177 (395)
T ss_pred CCCCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHH-----------HHH------HCCCEEEEeCC-CCCCCC
Confidence 345688888887642 3457899999998766554 333221 011 13468999994 899998
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
-... .+. .+.+..++|+..+++..-..+| ..+++|+|+|+||..+..+|. +.+ .+-.++|+++.+|
T Consensus 178 ~~~~--~~~-~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~sP 243 (395)
T PLN02652 178 DGLH--GYV-PSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTSP 243 (395)
T ss_pred CCCC--CCC-cCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEECc
Confidence 5432 222 2556678888888877666554 358999999999988765542 111 1235899999988
Q ss_pred ccCc
Q 011108 264 LIDG 267 (493)
Q Consensus 264 ~id~ 267 (493)
++..
T Consensus 244 ~l~~ 247 (395)
T PLN02652 244 ALRV 247 (395)
T ss_pred cccc
Confidence 8653
No 33
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.99 E-value=9.8e-09 Score=105.72 Aligned_cols=63 Identities=16% Similarity=0.162 Sum_probs=54.2
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcC-CCccCcccChHHHHHHH
Q 011108 402 SGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRG-AGHLVPSDQPERALTLI 480 (493)
Q Consensus 402 ~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~g-AGH~vP~dqP~~al~l~ 480 (493)
-.+||||+.|+.|.++|....+...+.+. .+-.+++|.+ |||+++.++|++...++
T Consensus 276 I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 276 IRVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred CCCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHH
Confidence 36899999999999999988888877763 2347889985 99999999999999999
Q ss_pred HHHHcCC
Q 011108 481 SSFLHGI 487 (493)
Q Consensus 481 ~~fl~g~ 487 (493)
..||...
T Consensus 333 ~~FL~~~ 339 (343)
T PRK08775 333 TTALRST 339 (343)
T ss_pred HHHHHhc
Confidence 9999753
No 34
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.99 E-value=4.4e-08 Score=105.01 Aligned_cols=133 Identities=17% Similarity=0.176 Sum_probs=85.2
Q ss_pred eeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhh-hhhcCCeEEcCCCCccccCCCCccccccE
Q 011108 93 DQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGA-MSELGPFRVNKDGKTLFRNNYAWNNVANV 171 (493)
Q Consensus 93 ~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~-f~E~GP~~v~~~~~~l~~N~~sWn~~anv 171 (493)
+.-.-|++.+ +..|||....... +..+|.||+|||.+|.+.. +.. +.+ .+.. .+.+...|
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yrV 235 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYRL 235 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCEE
Confidence 3445677765 3678888766543 2345789999999888776 532 110 0111 23456899
Q ss_pred EEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCc
Q 011108 172 VFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNT 251 (493)
Q Consensus 172 LfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~ 251 (493)
+.+|. .|.|.|-......| +.++.++|+.. .+++. +...+++|.|+|+||..+-.+|.+..
T Consensus 236 ia~Dl-~G~G~S~~p~~~~y---tl~~~a~~l~~---~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~P--------- 296 (481)
T PLN03087 236 FAVDL-LGFGRSPKPADSLY---TLREHLEMIER---SVLER---YKVKSFHIVAHSLGCILALALAVKHP--------- 296 (481)
T ss_pred EEECC-CCCCCCcCCCCCcC---CHHHHHHHHHH---HHHHH---cCCCCEEEEEECHHHHHHHHHHHhCh---------
Confidence 99995 79998853222222 45556665531 23333 45568999999999999988887542
Q ss_pred eeeeeeeEecCCc
Q 011108 252 VINLKGIAIGNAL 264 (493)
Q Consensus 252 ~inLkGi~IGNg~ 264 (493)
-.++++++.++-
T Consensus 297 -e~V~~LVLi~~~ 308 (481)
T PLN03087 297 -GAVKSLTLLAPP 308 (481)
T ss_pred -HhccEEEEECCC
Confidence 237888888753
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.99 E-value=8e-08 Score=101.34 Aligned_cols=120 Identities=14% Similarity=0.121 Sum_probs=76.0
Q ss_pred ceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCC
Q 011108 107 RSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSS 186 (493)
Q Consensus 107 ~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~ 186 (493)
+.+.+..++.+ ..+|.||.|||.++.+.. +.-.. -.+.+..+|+.+|. .|.|.|-..
T Consensus 92 ~~~~~~~~~~~---~~~p~vvllHG~~~~~~~-~~~~~------------------~~L~~~~~vi~~D~-rG~G~S~~~ 148 (402)
T PLN02894 92 RFINTVTFDSK---EDAPTLVMVHGYGASQGF-FFRNF------------------DALASRFRVIAIDQ-LGWGGSSRP 148 (402)
T ss_pred CeEEEEEecCC---CCCCEEEEECCCCcchhH-HHHHH------------------HHHHhCCEEEEECC-CCCCCCCCC
Confidence 35555555432 467999999999776554 32111 11233478999995 899998432
Q ss_pred CCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 187 TKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 187 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
...+ .+.++..+.+.+.+.+|.+.. ...+++|.|||+||..+-.+|.+- +..++++++.++..
T Consensus 149 -~~~~--~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 149 -DFTC--KSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPAG 211 (402)
T ss_pred -Cccc--ccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCcc
Confidence 1111 122334444555666776643 445899999999999888777653 34488888888764
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=98.97 E-value=1.1e-07 Score=97.52 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=81.9
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCccccc
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy 184 (493)
.|..++|+.++.. ..+|+||.+||-.+.+.. |.-+.. . +. .+-.+|+-+| ..|.|.|-
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~~---~--------l~------~~g~~v~~~D-~~G~G~S~ 96 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELAY---D--------LF------HLGYDVLIID-HRGQGRSG 96 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHHH---H--------HH------HCCCeEEEEc-CCCCCCCC
Confidence 3567888877643 346899999998554433 322221 0 11 1347899999 58999995
Q ss_pred CCCCCCC--ccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecC
Q 011108 185 SSTKSDY--ELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGN 262 (493)
Q Consensus 185 ~~~~~~~--~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGN 262 (493)
....... ...+-+..++|+..++...... +...++++.|+|+||..+-.+|.+- +-.++|+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~GhSmGG~ia~~~a~~~----------p~~v~~lvl~~ 163 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQP---GPYRKRYALAHSMGGAILTLFLQRH----------PGVFDAIALCA 163 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhc---CCCCCeEEEEEcHHHHHHHHHHHhC----------CCCcceEEEEC
Confidence 3211100 0014567788888877765443 3457899999999998877766542 33489999998
Q ss_pred CccC
Q 011108 263 ALID 266 (493)
Q Consensus 263 g~id 266 (493)
|...
T Consensus 164 p~~~ 167 (330)
T PRK10749 164 PMFG 167 (330)
T ss_pred chhc
Confidence 8754
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.96 E-value=2.2e-08 Score=101.38 Aligned_cols=125 Identities=19% Similarity=0.305 Sum_probs=79.7
Q ss_pred EEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCc-cccccEEEE
Q 011108 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAW-NNVANVVFL 174 (493)
Q Consensus 96 sGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sW-n~~anvLfi 174 (493)
.+|+.+.+ |..|+|.-.. .+. .|-||.+|||||.++.. .. . ..| .+..+|+.+
T Consensus 6 ~~~~~~~~--~~~l~y~~~g---~~~-~~~lvllHG~~~~~~~~-~~-~------------------~~~~~~~~~vi~~ 59 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQSG---NPD-GKPVVFLHGGPGSGTDP-GC-R------------------RFFDPETYRIVLF 59 (306)
T ss_pred CCeEEcCC--CcEEEEEECc---CCC-CCEEEEECCCCCCCCCH-HH-H------------------hccCccCCEEEEE
Confidence 47888864 5778875432 222 35578899999876541 10 0 011 145899999
Q ss_pred eCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceee
Q 011108 175 ESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (493)
Q Consensus 175 DqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~in 254 (493)
|. .|.|.|..... ... .+.++.++|+..++. . ++..++++.|+||||..+..+|.+. +-.
T Consensus 60 D~-~G~G~S~~~~~-~~~-~~~~~~~~dl~~l~~----~---l~~~~~~lvG~S~GG~ia~~~a~~~----------p~~ 119 (306)
T TIGR01249 60 DQ-RGCGKSTPHAC-LEE-NTTWDLVADIEKLRE----K---LGIKNWLVFGGSWGSTLALAYAQTH----------PEV 119 (306)
T ss_pred CC-CCCCCCCCCCC-ccc-CCHHHHHHHHHHHHH----H---cCCCCEEEEEECHHHHHHHHHHHHC----------hHh
Confidence 95 79999964321 111 244556666655443 3 3446799999999999888887654 233
Q ss_pred eeeeEecCCccC
Q 011108 255 LKGIAIGNALID 266 (493)
Q Consensus 255 LkGi~IGNg~id 266 (493)
++++++.+..+.
T Consensus 120 v~~lvl~~~~~~ 131 (306)
T TIGR01249 120 VTGLVLRGIFLL 131 (306)
T ss_pred hhhheeeccccC
Confidence 788888877655
No 38
>PRK06489 hypothetical protein; Provisional
Probab=98.92 E-value=3.9e-08 Score=101.98 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=50.4
Q ss_pred hcCceEEEEecCCccccCchhH--HHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCC----CccCcccChH
Q 011108 401 ASGIRVWIYSGDVDGIVPTTAS--RYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGA----GHLVPSDQPE 474 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt--~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gA----GH~vP~dqP~ 474 (493)
+...||||++|+.|.++|.... +...+.+. +.++++|.+| ||++. ++|+
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip------------------------~a~l~~i~~a~~~~GH~~~-e~P~ 344 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRVK------------------------HGRLVLIPASPETRGHGTT-GSAK 344 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhCc------------------------CCeEEEECCCCCCCCcccc-cCHH
Confidence 3479999999999999997754 44444443 4588999996 99986 8999
Q ss_pred HHHHHHHHHHcCC
Q 011108 475 RALTLISSFLHGI 487 (493)
Q Consensus 475 ~al~l~~~fl~g~ 487 (493)
+..+.|..||...
T Consensus 345 ~~~~~i~~FL~~~ 357 (360)
T PRK06489 345 FWKAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999753
No 39
>PLN02965 Probable pheophorbidase
Probab=98.92 E-value=4.5e-08 Score=96.14 Aligned_cols=60 Identities=5% Similarity=0.011 Sum_probs=52.9
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHH
Q 011108 402 SGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLIS 481 (493)
Q Consensus 402 ~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~ 481 (493)
..+|+++..|..|.++|....+...+.+. +-+++.+.+|||+++.++|+....++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC------------------------cceEEEecCCCCchhhcCHHHHHHHHH
Confidence 47999999999999999987777776654 457788999999999999999999999
Q ss_pred HHHc
Q 011108 482 SFLH 485 (493)
Q Consensus 482 ~fl~ 485 (493)
+|+.
T Consensus 248 ~~~~ 251 (255)
T PLN02965 248 QAVS 251 (255)
T ss_pred HHHH
Confidence 9975
No 40
>PLN02578 hydrolase
Probab=98.89 E-value=3.9e-08 Score=101.83 Aligned_cols=112 Identities=16% Similarity=0.171 Sum_probs=73.6
Q ss_pred CceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccC
Q 011108 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (493)
Q Consensus 106 ~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~ 185 (493)
|..++|.-.. +.|-||.+||-++.+.. +....+ .+.+..+|+.+|. .|.|.|-.
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~-w~~~~~------------------~l~~~~~v~~~D~-~G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFH-WRYNIP------------------ELAKKYKVYALDL-LGFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHHH------------------HHhcCCEEEEECC-CCCCCCCC
Confidence 4566665322 23557899987554433 322221 1234588999996 69998854
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
. ..+| +.+..++|+.+|+... ...+++|.|+|+||..+..+|.+. +..++++++.|+.
T Consensus 129 ~-~~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~----------p~~v~~lvLv~~~ 186 (354)
T PLN02578 129 A-LIEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGY----------PELVAGVALLNSA 186 (354)
T ss_pred c-cccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhC----------hHhcceEEEECCC
Confidence 3 2223 5566777877777642 346899999999999888888764 3348899888764
No 41
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.87 E-value=3e-08 Score=110.19 Aligned_cols=136 Identities=19% Similarity=0.250 Sum_probs=87.8
Q ss_pred EEEecCCCCceEEEEEEeCCC-CCCC-CCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCC-CCccccccEEEE
Q 011108 98 YVTVDPKTGRSLFYYFAESPQ-NSST-NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNN-YAWNNVANVVFL 174 (493)
Q Consensus 98 yv~v~~~~~~~lFy~f~es~~-~~~~-~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~-~sWn~~anvLfi 174 (493)
++.+....|..+..|++.... ++.. -|+|+++|||| +++ +|. . ...+. .=+.+-++||++
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~-------~~~~~q~~~~~G~~V~~~ 429 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------S-------FNPEIQVLASAGYAVLAP 429 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------c-------cchhhHHHhcCCeEEEEe
Confidence 344444457789999998764 3322 49999999999 555 330 1 11112 224567899999
Q ss_pred eCCCCccc---ccCCCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCC
Q 011108 175 ESPAGVGF---SYSSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN 250 (493)
Q Consensus 175 DqP~GvGf---Sy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~ 250 (493)
+ |.|.+. .|.... .++ + ....+|+.+++. |+++.|..-..++.|+|.||||...-.++.+-
T Consensus 430 n-~RGS~GyG~~F~~~~~~~~---g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~--------- 494 (620)
T COG1506 430 N-YRGSTGYGREFADAIRGDW---G-GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKT--------- 494 (620)
T ss_pred C-CCCCCccHHHHHHhhhhcc---C-CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcC---------
Confidence 9 787653 222211 111 2 135788899888 99999999888999999999998665555332
Q ss_pred ceeeeeeeEecCCccCc
Q 011108 251 TVINLKGIAIGNALIDG 267 (493)
Q Consensus 251 ~~inLkGi~IGNg~id~ 267 (493)
+ -+|..+...+.++.
T Consensus 495 -~-~f~a~~~~~~~~~~ 509 (620)
T COG1506 495 -P-RFKAAVAVAGGVDW 509 (620)
T ss_pred -c-hhheEEeccCcchh
Confidence 2 36666666655554
No 42
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.86 E-value=3.5e-07 Score=94.02 Aligned_cols=153 Identities=17% Similarity=0.113 Sum_probs=89.6
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhc-------CCeEEcCCCCccccC---CCCc-cccccEEE
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSEL-------GPFRVNKDGKTLFRN---NYAW-NNVANVVF 173 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~-------GP~~v~~~~~~l~~N---~~sW-n~~anvLf 173 (493)
.|..|+++..+.+ ..+.+|+.+||==+.+. +-.+.-+ +|+.|+.+.. ..++ -... .+-..|+-
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~--~~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGLKSHLR--LQFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCCchhhh--hhhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEE
Confidence 4677888877653 34679999998533332 1222111 3444433210 0000 0122 24588999
Q ss_pred EeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHH--------CC--------CCC-CCCEEEEeccccccchHH
Q 011108 174 LESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLER--------FP--------QYK-KRDFYIAGESYAGHYVPQ 236 (493)
Q Consensus 174 iDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~--------fP--------~y~-~~~fyI~GESYgG~YvP~ 236 (493)
+|. .|.|.|...+.......+-+..++|+..++....+. ++ ++. +.|+||.|||+||..+..
T Consensus 80 ~D~-rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDL-QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred ecc-cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 995 999999754321111125567888888888765431 00 233 679999999999998887
Q ss_pred HHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 237 LAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 237 lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
++....+.... .....++|+++..|++.
T Consensus 159 ~~~~~~~~~~~--~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 159 LLELLGKSNEN--NDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHhcccccc--ccccccceEEEeccceE
Confidence 77655322100 01235899987777764
No 43
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.83 E-value=1.6e-07 Score=98.13 Aligned_cols=69 Identities=22% Similarity=0.173 Sum_probs=55.6
Q ss_pred hhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEc-CCCccCcccChHHHH
Q 011108 399 LIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVR-GAGHLVPSDQPERAL 477 (493)
Q Consensus 399 Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~-gAGH~vP~dqP~~al 477 (493)
|-+..+||||..|+.|.++|....+...+.+.=.+ +..+++.|. ++||+.+.++|++..
T Consensus 305 l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~--------------------~~~~l~~i~~~~GH~~~le~p~~~~ 364 (379)
T PRK00175 305 LARIKARFLVVSFTSDWLFPPARSREIVDALLAAG--------------------ADVSYAEIDSPYGHDAFLLDDPRYG 364 (379)
T ss_pred HhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcC--------------------CCeEEEEeCCCCCchhHhcCHHHHH
Confidence 33447899999999999999998887777664000 124778886 999999999999999
Q ss_pred HHHHHHHcCC
Q 011108 478 TLISSFLHGI 487 (493)
Q Consensus 478 ~l~~~fl~g~ 487 (493)
+.+..||.+.
T Consensus 365 ~~L~~FL~~~ 374 (379)
T PRK00175 365 RLVRAFLERA 374 (379)
T ss_pred HHHHHHHHhh
Confidence 9999999864
No 44
>PRK07581 hypothetical protein; Validated
Probab=98.81 E-value=3.9e-07 Score=93.44 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=55.3
Q ss_pred HhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcC-CCccCcccChHHH
Q 011108 398 NLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRG-AGHLVPSDQPERA 476 (493)
Q Consensus 398 ~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~g-AGH~vP~dqP~~a 476 (493)
.|-+..+||||+.|+.|.++|....+.+.+.+. +.++++|.+ +||+++.+||+..
T Consensus 270 ~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~ 325 (339)
T PRK07581 270 ALGSITAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPAD 325 (339)
T ss_pred HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHH
Confidence 333447999999999999999998888777654 458899999 9999999999999
Q ss_pred HHHHHHHHc
Q 011108 477 LTLISSFLH 485 (493)
Q Consensus 477 l~l~~~fl~ 485 (493)
..++++||.
T Consensus 326 ~~~~~~~~~ 334 (339)
T PRK07581 326 IAFIDAALK 334 (339)
T ss_pred HHHHHHHHH
Confidence 999999986
No 45
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.73 E-value=5.7e-07 Score=90.72 Aligned_cols=133 Identities=14% Similarity=0.172 Sum_probs=86.4
Q ss_pred EEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEe
Q 011108 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLE 175 (493)
Q Consensus 96 sGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiD 175 (493)
+=|+.+.+..+ -|.++-...+++++-++.+||= |.++. +|. +|=-+..+..||-.||
T Consensus 67 ~~~v~i~~~~~----iw~~~~~~~~~~~~plVliHGy-GAg~g---~f~---------------~Nf~~La~~~~vyaiD 123 (365)
T KOG4409|consen 67 KKYVRIPNGIE----IWTITVSNESANKTPLVLIHGY-GAGLG---LFF---------------RNFDDLAKIRNVYAID 123 (365)
T ss_pred eeeeecCCCce----eEEEeecccccCCCcEEEEecc-chhHH---HHH---------------HhhhhhhhcCceEEec
Confidence 44666653322 3445443344677777889983 33332 222 3444555688999999
Q ss_pred CCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeee
Q 011108 176 SPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (493)
Q Consensus 176 qP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inL 255 (493)
+.|-|+|--..-+ . +-+..-+.+.+-+.+|... .+-.+.+|.|||+||......|.+..++ +
T Consensus 124 -llG~G~SSRP~F~-~---d~~~~e~~fvesiE~WR~~---~~L~KmilvGHSfGGYLaa~YAlKyPer----------V 185 (365)
T KOG4409|consen 124 -LLGFGRSSRPKFS-I---DPTTAEKEFVESIEQWRKK---MGLEKMILVGHSFGGYLAAKYALKYPER----------V 185 (365)
T ss_pred -ccCCCCCCCCCCC-C---CcccchHHHHHHHHHHHHH---cCCcceeEeeccchHHHHHHHHHhChHh----------h
Confidence 6899999543222 1 1122223667778888876 3556999999999999888888766444 7
Q ss_pred eeeEecCCccCccc
Q 011108 256 KGIAIGNALIDGPT 269 (493)
Q Consensus 256 kGi~IGNg~id~~~ 269 (493)
+-+++.+||--+..
T Consensus 186 ~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 186 EKLILVSPWGFPEK 199 (365)
T ss_pred ceEEEecccccccC
Confidence 88899999877663
No 46
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.70 E-value=4.5e-07 Score=110.59 Aligned_cols=107 Identities=15% Similarity=0.191 Sum_probs=72.4
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCC-----CCCccC
Q 011108 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTK-----SDYELN 194 (493)
Q Consensus 120 ~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~-----~~~~~~ 194 (493)
..+.|.||+|||.+|++.. |-.+.+ .+ .+..+|+.+| ..|.|.|..... ... ..
T Consensus 1368 ~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~D-l~G~G~S~~~~~~~~~~~~~-~~ 1426 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISID-LPGHGGSKIQNHAKETQTEP-TL 1426 (1655)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEc-CCCCCCCCCccccccccccc-cC
Confidence 3457899999999888876 543332 11 2347999999 579998864321 011 12
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
+.+..|+++.+++. ++...+++|.|+|+||..+-.+|.+. +-.++++++.++.
T Consensus 1427 si~~~a~~l~~ll~-------~l~~~~v~LvGhSmGG~iAl~~A~~~----------P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1427 SVELVADLLYKLIE-------HITPGKVTLVGYSMGARIALYMALRF----------SDKIEGAVIISGS 1479 (1655)
T ss_pred CHHHHHHHHHHHHH-------HhCCCCEEEEEECHHHHHHHHHHHhC----------hHhhCEEEEECCC
Confidence 55667777766655 23456899999999999998888654 2337888776653
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.66 E-value=9e-07 Score=93.75 Aligned_cols=130 Identities=18% Similarity=0.220 Sum_probs=78.2
Q ss_pred EEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhh-hhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCC
Q 011108 99 VTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLG-YGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESP 177 (493)
Q Consensus 99 v~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~-~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP 177 (493)
|.+.-..+..|.-|++... .....|+|| ++||.++.... +..+.+ +--.+-.+||-+|-|
T Consensus 171 v~i~~~~g~~l~g~l~~P~-~~~~~P~Vl-i~gG~~~~~~~~~~~~~~-----------------~La~~Gy~vl~~D~p 231 (414)
T PRK05077 171 LEFPIPGGGPITGFLHLPK-GDGPFPTVL-VCGGLDSLQTDYYRLFRD-----------------YLAPRGIAMLTIDMP 231 (414)
T ss_pred EEEEcCCCcEEEEEEEECC-CCCCccEEE-EeCCcccchhhhHHHHHH-----------------HHHhCCCEEEEECCC
Confidence 4443223335666665443 234578887 55666653211 222211 011223789999976
Q ss_pred CCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeee
Q 011108 178 AGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKG 257 (493)
Q Consensus 178 ~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkG 257 (493)
|+|.|-..... .+ .......+.+|+...|.....++.|+|+|+||.+++.+|..- +-.+++
T Consensus 232 -G~G~s~~~~~~-----~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~----------p~ri~a 292 (414)
T PRK05077 232 -SVGFSSKWKLT-----QD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE----------PPRLKA 292 (414)
T ss_pred -CCCCCCCCCcc-----cc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC----------CcCceE
Confidence 99998532110 11 122224466677777777778999999999999999988642 223889
Q ss_pred eEecCCccC
Q 011108 258 IAIGNALID 266 (493)
Q Consensus 258 i~IGNg~id 266 (493)
+++.+|.++
T Consensus 293 ~V~~~~~~~ 301 (414)
T PRK05077 293 VACLGPVVH 301 (414)
T ss_pred EEEECCccc
Confidence 888887764
No 48
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.57 E-value=2.2e-06 Score=87.94 Aligned_cols=61 Identities=34% Similarity=0.479 Sum_probs=54.3
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
+.||+|..|+.|.++|....+...+.+. +..+..|.+|||.+..++|++...+|..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p------------------------n~~~~~I~~~gH~~h~e~Pe~~~~~i~~ 319 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP------------------------NAELVEIPGAGHLPHLERPEEVAALLRS 319 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC------------------------CceEEEeCCCCcccccCCHHHHHHHHHH
Confidence 4899999999999999997766666553 7799999999999999999999999999
Q ss_pred HHcCC
Q 011108 483 FLHGI 487 (493)
Q Consensus 483 fl~g~ 487 (493)
|+.+.
T Consensus 320 Fi~~~ 324 (326)
T KOG1454|consen 320 FIARL 324 (326)
T ss_pred HHHHh
Confidence 99764
No 49
>PLN02511 hydrolase
Probab=98.51 E-value=7.7e-07 Score=93.48 Aligned_cols=116 Identities=21% Similarity=0.202 Sum_probs=72.9
Q ss_pred EEEecCCCCceEEEEEEeC--CCCCCCCCEEEEEcCCCChhhhhhh-hhhhcCCeEEcCCCCccccCCCCccccccEEEE
Q 011108 98 YVTVDPKTGRSLFYYFAES--PQNSSTNPLLLWLNGGPGCSSLGYG-AMSELGPFRVNKDGKTLFRNNYAWNNVANVVFL 174 (493)
Q Consensus 98 yv~v~~~~~~~lFy~f~es--~~~~~~~PlvlWLnGGPGcSSl~~G-~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfi 174 (493)
++... .|..+.+.++.. ...+.++|+||.|||..|+|...|- .+.. ....+-.+++-+
T Consensus 75 ~l~~~--DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------------~~~~~g~~vv~~ 135 (388)
T PLN02511 75 CLRTP--DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------------RARSKGWRVVVF 135 (388)
T ss_pred EEECC--CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------------HHHHCCCEEEEE
Confidence 45543 355666544432 2235678999999999988743121 1110 011345789999
Q ss_pred eCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHH
Q 011108 175 ESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 175 DqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~ 240 (493)
|. .|.|-|-......+ ....++|+.+++...-.++| ..+++++|+|+||..+-.++.+
T Consensus 136 d~-rG~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 136 NS-RGCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred ec-CCCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 95 89999864322211 13456788877766666655 4689999999999987666544
No 50
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.48 E-value=4.9e-06 Score=83.09 Aligned_cols=59 Identities=10% Similarity=-0.023 Sum_probs=50.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
.+|++++.|..|.++|..-.++.++.+. +-+++++. +||+++..+|+....+|..
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~------------------------~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP------------------------PSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC------------------------ccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 5899999999999999998888887754 22667785 9999999999999999998
Q ss_pred HHcC
Q 011108 483 FLHG 486 (493)
Q Consensus 483 fl~g 486 (493)
+...
T Consensus 266 ~a~~ 269 (273)
T PLN02211 266 AAAS 269 (273)
T ss_pred HHHH
Confidence 7654
No 51
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.44 E-value=9.8e-06 Score=83.72 Aligned_cols=68 Identities=24% Similarity=0.179 Sum_probs=53.0
Q ss_pred HhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEE-cCCCccCcccChHHH
Q 011108 398 NLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTV-RGAGHLVPSDQPERA 476 (493)
Q Consensus 398 ~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV-~gAGH~vP~dqP~~a 476 (493)
.|-+..+|||++.|+.|.++|....+...+.+.= . ---.+|+.| .+|||+++.++|++.
T Consensus 283 ~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~--~------------------~~~v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 283 ALSRIKAPFLVVSITSDWLFPPAESRELAKALPA--A------------------GLRVTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred HHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh--c------------------CCceEEEEeCCCCCcchhhcCHHHH
Confidence 3334479999999999999999988888777640 0 001245556 589999999999999
Q ss_pred HHHHHHHHc
Q 011108 477 LTLISSFLH 485 (493)
Q Consensus 477 l~l~~~fl~ 485 (493)
...|.+||+
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999984
No 52
>PRK10566 esterase; Provisional
Probab=98.43 E-value=4.8e-06 Score=81.08 Aligned_cols=62 Identities=24% Similarity=0.265 Sum_probs=48.4
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
..|||+.+|+.|.++|...++...+.++-.+. ...+++.++.|+||.+. | ..++-+..
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~~ 243 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL------------------DKNLTCLWEPGVRHRIT---P-EALDAGVA 243 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------CcceEEEecCCCCCccC---H-HHHHHHHH
Confidence 47999999999999999999998888863222 12478999999999974 3 45677777
Q ss_pred HHcC
Q 011108 483 FLHG 486 (493)
Q Consensus 483 fl~g 486 (493)
||..
T Consensus 244 fl~~ 247 (249)
T PRK10566 244 FFRQ 247 (249)
T ss_pred HHHh
Confidence 7764
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=98.41 E-value=4.9e-06 Score=90.94 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=67.3
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCccccc
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy 184 (493)
.|..|.|+-+. +.+.|.||.+||.++.+.. |.-+.+ .| .+..+|+.+| ..|.|.|.
T Consensus 11 ~g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~~Vi~~D-~~G~G~S~ 66 (582)
T PRK05855 11 DGVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAP-----------LL-------ADRFRVVAYD-VRGAGRSS 66 (582)
T ss_pred CCEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHH-----------Hh-------hcceEEEEec-CCCCCCCC
Confidence 35677776543 2347999999999766655 544432 11 2347899999 57999997
Q ss_pred CCCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHH
Q 011108 185 SSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLA 238 (493)
Q Consensus 185 ~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA 238 (493)
.... .++ +.+..++|+..++...- ..++++|.|+|+||..+-.++
T Consensus 67 ~~~~~~~~---~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 67 APKRTAAY---TLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred CCCccccc---CHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHHH
Confidence 4332 222 66788889888776421 134699999999995554443
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.40 E-value=3.4e-05 Score=77.05 Aligned_cols=80 Identities=18% Similarity=0.107 Sum_probs=56.9
Q ss_pred cccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC
Q 011108 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
-.+++-+|. .|.|.|.... .+-+...+|+..+++.+.+.+|.+ .++++.|+|+||..+-.+|..
T Consensus 57 G~~v~~~Dl-~G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~------- 120 (274)
T TIGR03100 57 GFPVLRFDY-RGMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA------- 120 (274)
T ss_pred CCEEEEeCC-CCCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh-------
Confidence 378999996 6999986431 144556788888777666666554 469999999999766555421
Q ss_pred CCCceeeeeeeEecCCccCc
Q 011108 248 TKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 248 ~~~~~inLkGi~IGNg~id~ 267 (493)
.-.++|+++.||++..
T Consensus 121 ----~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 121 ----DLRVAGLVLLNPWVRT 136 (274)
T ss_pred ----CCCccEEEEECCccCC
Confidence 1248999999998653
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.38 E-value=7.4e-07 Score=84.37 Aligned_cols=57 Identities=23% Similarity=0.344 Sum_probs=50.3
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHH
Q 011108 401 ASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLI 480 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~ 480 (493)
+..+|+++++|+.|.++|....+...+.+. +..++.++++||....+.|+..-+++
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP------------------------NSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST------------------------TEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCEEEECCCCChHHHhcCHHhhhhhh
Confidence 457999999999999999998888666655 56889999999999999999999887
Q ss_pred H
Q 011108 481 S 481 (493)
Q Consensus 481 ~ 481 (493)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 5
No 56
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.35 E-value=3.2e-05 Score=78.36 Aligned_cols=274 Identities=16% Similarity=0.139 Sum_probs=157.6
Q ss_pred eEEEEEEecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEE
Q 011108 94 QYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVF 173 (493)
Q Consensus 94 ~ysGyv~v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLf 173 (493)
.-.|+.... .+..++|+.+++.+++. .+|+++||.=.++.- |--+.+ .+. .+=+.|+=
T Consensus 9 ~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~------~~G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLA------ARGFDVYA 66 (298)
T ss_pred cccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHH------hCCCEEEE
Confidence 334555543 46889999998876443 899999998666655 433221 111 13467889
Q ss_pred EeCCCCccccc-CCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCce
Q 011108 174 LESPAGVGFSY-SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTV 252 (493)
Q Consensus 174 iDqP~GvGfSy-~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~ 252 (493)
+|. .|.|.|. .... ... +-++...|+..|+...-+. ....++||+|||.||-.+...+.+. .
T Consensus 67 ~D~-RGhG~S~r~~rg--~~~-~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~----------~ 129 (298)
T COG2267 67 LDL-RGHGRSPRGQRG--HVD-SFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLARY----------P 129 (298)
T ss_pred ecC-CCCCCCCCCCcC--Cch-hHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhC----------C
Confidence 996 9999997 3221 111 3345556666655544433 4567999999999999888777654 3
Q ss_pred eeeeeeEecCCccCccc--ccchhhhh-hhhccCCChhhhhchhcccccccCCCChHHHHHHHHHHHhhcCCCcc---cc
Q 011108 253 INLKGIAIGNALIDGPT--RSMGVYEN-LWTHALNSDQTHKGIFTYCDFAREGNDTKECETFLEKASDEIGDIDI---YN 326 (493)
Q Consensus 253 inLkGi~IGNg~id~~~--~~~~~~~~-~~~~gli~~~~~~~i~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~---Yn 326 (493)
-+++|+++-+|++.... ........ +.-.+.+.+.. .++. .+
T Consensus 130 ~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~--------------------------------~~~~~~~~~ 177 (298)
T COG2267 130 PRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKL--------------------------------PVDSNLLEG 177 (298)
T ss_pred ccccEEEEECccccCChhHHHHHHHHHhccccccccccc--------------------------------ccCcccccC
Confidence 45999999999988764 11000000 00000000000 0000 00
Q ss_pred CCCCcCCCCCcCCCCCCCCCCCCCCchhHHHHHhChHHHHHHhccCCCCCcccC--ccccCCCCCCCcHHHHHHhhhcCc
Q 011108 327 IYAPICINPAFQNGSIGSVHNYDPCTDYYVEAYLNTREVQTVLHVKPTNWTACS--NLFNWTDSPSTVLPTIKNLIASGI 404 (493)
Q Consensus 327 i~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vq~ALhv~~~~w~~cs--~v~~~~d~~~s~~~~l~~Ll~~~i 404 (493)
+.. .+.+ -.......|-.+|... .+.+...|..-. ... .+..+.-....+
T Consensus 178 ~~~-~~~s----------------r~~~~~~~~~~dP~~~--~~~~~~~w~~~~~~a~~---------~~~~~~~~~~~~ 229 (298)
T COG2267 178 VLT-DDLS----------------RDPAEVAAYEADPLIG--VGGPVSRWVDLALLAGR---------VPALRDAPAIAL 229 (298)
T ss_pred cCc-chhh----------------cCHHHHHHHhcCCccc--cCCccHHHHHHHHHhhc---------ccchhccccccC
Confidence 000 0000 0011233333333110 111110111100 000 112222233479
Q ss_pred eEEEEecCCccccC-chhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccCh---HHHHHHH
Q 011108 405 RVWIYSGDVDGIVP-TTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQP---ERALTLI 480 (493)
Q Consensus 405 rVliysGd~D~ivp-~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP---~~al~l~ 480 (493)
||||.+|..|.+|. ..+...+++.+.-+. .+++.+.||.|.+-.+.+ +.+++.+
T Consensus 230 PvLll~g~~D~vv~~~~~~~~~~~~~~~~~----------------------~~~~~~~g~~He~~~E~~~~r~~~~~~~ 287 (298)
T COG2267 230 PVLLLQGGDDRVVDNVEGLARFFERAGSPD----------------------KELKVIPGAYHELLNEPDRAREEVLKDI 287 (298)
T ss_pred CEEEEecCCCccccCcHHHHHHHHhcCCCC----------------------ceEEecCCcchhhhcCcchHHHHHHHHH
Confidence 99999999999999 799999999888443 489999999999988765 5888999
Q ss_pred HHHHcCCC
Q 011108 481 SSFLHGIL 488 (493)
Q Consensus 481 ~~fl~g~~ 488 (493)
..|+....
T Consensus 288 ~~~l~~~~ 295 (298)
T COG2267 288 LAWLAEAL 295 (298)
T ss_pred HHHHHhhc
Confidence 99987654
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.31 E-value=8.3e-05 Score=69.66 Aligned_cols=104 Identities=22% Similarity=0.231 Sum_probs=66.9
Q ss_pred CCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHH
Q 011108 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (493)
Q Consensus 123 ~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (493)
.|.++++||+|+++.. +....+. +..... + .+++.+|+| |.|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6799999999999887 4331110 111111 1 899999998 999996 11 11 22223555
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 203 ~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
+..++. . +...++++.|+||||..+-.+|.+..+ .++++++.++...
T Consensus 78 ~~~~~~----~---~~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLD----A---LGLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHH----H---hCCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 555444 2 344459999999998887777766533 4777777776655
No 58
>PRK10985 putative hydrolase; Provisional
Probab=98.30 E-value=2.1e-05 Score=80.45 Aligned_cols=110 Identities=19% Similarity=0.205 Sum_probs=60.1
Q ss_pred CceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhh-hhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCccccc
Q 011108 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGA-MSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (493)
Q Consensus 106 ~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~-f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy 184 (493)
|..+.+++.+....+.++|+||.+||.+|++...+.. +.+ .+.. +-.+++-.|. .|.|-|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~------~G~~v~~~d~-rG~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQK------RGWLGVVMHF-RGCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHH------CCCEEEEEeC-CCCCCCc
Confidence 4445444444333456789999999999875432210 111 1111 1246777885 7887553
Q ss_pred CCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHH
Q 011108 185 SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 185 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~ 240 (493)
......+. .+ ..+|+..++....+++ ...+++++|+|+||..+-.++..
T Consensus 103 ~~~~~~~~-~~---~~~D~~~~i~~l~~~~---~~~~~~~vG~S~GG~i~~~~~~~ 151 (324)
T PRK10985 103 NRLHRIYH-SG---ETEDARFFLRWLQREF---GHVPTAAVGYSLGGNMLACLLAK 151 (324)
T ss_pred cCCcceEC-CC---chHHHHHHHHHHHHhC---CCCCEEEEEecchHHHHHHHHHh
Confidence 22122121 12 2456555443323334 34689999999999876555543
No 59
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.26 E-value=8.3e-06 Score=77.87 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=60.3
Q ss_pred ccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHccc
Q 011108 167 NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNK 246 (493)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~ 246 (493)
+=..|+.+|.+-+.||+..-....... .-....+|+.++++...++. .....+++|+|.||||+.+-.++.+-
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~----- 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH----- 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT-----
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc-----
Confidence 557899999766666665311111111 23457888888666554443 55667899999999999888777632
Q ss_pred CCCCceeeeeeeEecCCccCcccc
Q 011108 247 NTKNTVINLKGIAIGNALIDGPTR 270 (493)
Q Consensus 247 ~~~~~~inLkGi~IGNg~id~~~~ 270 (493)
+-.+++++.++|++|....
T Consensus 86 -----~~~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 86 -----PDRFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp -----CCGSSEEEEESE-SSTTCS
T ss_pred -----ceeeeeeeccceecchhcc
Confidence 3347999999999887654
No 60
>PLN02872 triacylglycerol lipase
Probab=98.19 E-value=1.8e-05 Score=83.29 Aligned_cols=61 Identities=18% Similarity=0.395 Sum_probs=51.2
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCcc---CcccChHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHL---VPSDQPERALTL 479 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~---vP~dqP~~al~l 479 (493)
.+||+++.|+.|.+++....+...+.|.= ...+..++++||+ ...+.|+...+.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~-----------------------~~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS-----------------------KPELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC-----------------------ccEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 58999999999999999999999988760 1256778999996 345889999999
Q ss_pred HHHHHcC
Q 011108 480 ISSFLHG 486 (493)
Q Consensus 480 ~~~fl~g 486 (493)
+..|+.+
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999874
No 61
>PLN02442 S-formylglutathione hydrolase
Probab=98.17 E-value=5.6e-05 Score=75.92 Aligned_cols=48 Identities=17% Similarity=0.079 Sum_probs=36.2
Q ss_pred cCceEEEEecCCccccCch-hHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCc
Q 011108 402 SGIRVWIYSGDVDGIVPTT-ASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVP 469 (493)
Q Consensus 402 ~~irVliysGd~D~ivp~~-gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP 469 (493)
.+.||++.+|+.|.+|+.. .++.+.+.++=.+ ...++..++|++|...
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g--------------------~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEAG--------------------APVTLRLQPGYDHSYF 264 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHcC--------------------CCeEEEEeCCCCccHH
Confidence 3689999999999999974 4666666654111 1368999999999866
No 62
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.14 E-value=0.0002 Score=71.27 Aligned_cols=129 Identities=20% Similarity=0.185 Sum_probs=87.0
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCccccc
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy 184 (493)
.|..||.-.......++-+-+|+.+||.-+-||.-|--+.. .|..+ -.-|-.+|+ .|.|+|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~-----------~l~~~------g~~v~a~D~-~GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK-----------RLAKS------GFAVYAIDY-EGHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH-----------HHHhC------CCeEEEeec-cCCCcCC
Confidence 46788886665544457778999999976655431211111 11111 234778997 9999997
Q ss_pred CCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 185 SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 185 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
+- ..|.. +-+..++|...|+..+..+ +++++.+.|+.|||+||-.+-.++.+ + +--..|+++..|+
T Consensus 98 Gl--~~yi~-~~d~~v~D~~~~~~~i~~~-~e~~~lp~FL~GeSMGGAV~Ll~~~k---~-------p~~w~G~ilvaPm 163 (313)
T KOG1455|consen 98 GL--HAYVP-SFDLVVDDVISFFDSIKER-EENKGLPRFLFGESMGGAVALLIALK---D-------PNFWDGAILVAPM 163 (313)
T ss_pred CC--cccCC-cHHHHHHHHHHHHHHHhhc-cccCCCCeeeeecCcchHHHHHHHhh---C-------Ccccccceeeecc
Confidence 43 34443 7788999998888876655 58999999999999999877666654 1 2236777766665
Q ss_pred c
Q 011108 265 I 265 (493)
Q Consensus 265 i 265 (493)
.
T Consensus 164 c 164 (313)
T KOG1455|consen 164 C 164 (313)
T ss_pred c
Confidence 4
No 63
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.13 E-value=4.8e-05 Score=79.95 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=57.5
Q ss_pred HHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcC-CCccCcccChHH
Q 011108 397 KNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRG-AGHLVPSDQPER 475 (493)
Q Consensus 397 ~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~g-AGH~vP~dqP~~ 475 (493)
+.|-+...||+|+.|+.|.++|....+...+.+.-.+ .+.+++.|.+ +||+++.++|++
T Consensus 317 ~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~--------------------~~a~l~~I~s~~GH~~~le~p~~ 376 (389)
T PRK06765 317 EALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG--------------------KYAEVYEIESINGHMAGVFDIHL 376 (389)
T ss_pred HHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEEECCCCCcchhhcCHHH
Confidence 3444457999999999999999988887777664100 2468899986 999999999999
Q ss_pred HHHHHHHHHcCC
Q 011108 476 ALTLISSFLHGI 487 (493)
Q Consensus 476 al~l~~~fl~g~ 487 (493)
....+.+||..+
T Consensus 377 ~~~~I~~FL~~~ 388 (389)
T PRK06765 377 FEKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHHHccc
Confidence 999999999764
No 64
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.95 E-value=0.00077 Score=67.27 Aligned_cols=50 Identities=20% Similarity=0.054 Sum_probs=36.3
Q ss_pred CceEEEEecCCccccCc-hhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccC
Q 011108 403 GIRVWIYSGDVDGIVPT-TASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQ 472 (493)
Q Consensus 403 ~irVliysGd~D~ivp~-~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dq 472 (493)
..+++|.+|..|..+|. ...+...+.|+=.+ ...++.++.|+||--....
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g--------------------~~v~~~~~~g~~H~f~~~~ 261 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAG--------------------QALTLRRQAGYDHSYYFIA 261 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcC--------------------CCeEEEEeCCCCccchhHH
Confidence 46899999999999998 45555555554111 1468899999999876544
No 65
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.94 E-value=2.3e-05 Score=80.99 Aligned_cols=132 Identities=16% Similarity=0.267 Sum_probs=80.1
Q ss_pred EEEEEEeCCC--CCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCC
Q 011108 109 LFYYFAESPQ--NSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSS 186 (493)
Q Consensus 109 lFy~f~es~~--~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~ 186 (493)
-.||++++++ +|++||+||++||| |.+.+.=|+.+. .-.+-|..-+...+|.+|-..=. | ..
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~-~~ 169 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--S-DE 169 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--c-cc
Confidence 4599999643 68889999999999 344444444331 11111222224489999952221 0 00
Q ss_pred CCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 187 TKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 187 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
....|++ ...++.+..+...+. -...++.++|+|-||+.+-.+..++.+.++. +. =|+.++..||++
T Consensus 170 ~~~~yPt-----QL~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~-Pk~~iLISPWv~ 236 (374)
T PF10340_consen 170 HGHKYPT-----QLRQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL----PY-PKSAILISPWVN 236 (374)
T ss_pred CCCcCch-----HHHHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC----CC-CceeEEECCCcC
Confidence 2223442 233333333333322 2456899999999999999999987665532 22 278889999999
Q ss_pred ccc
Q 011108 267 GPT 269 (493)
Q Consensus 267 ~~~ 269 (493)
+..
T Consensus 237 l~~ 239 (374)
T PF10340_consen 237 LVP 239 (374)
T ss_pred CcC
Confidence 873
No 66
>PRK10115 protease 2; Provisional
Probab=97.87 E-value=0.00023 Score=80.21 Aligned_cols=140 Identities=16% Similarity=0.081 Sum_probs=81.8
Q ss_pred EEecCCCCceEEEEEEeCCC--CCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeC
Q 011108 99 VTVDPKTGRSLFYYFAESPQ--NSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLES 176 (493)
Q Consensus 99 v~v~~~~~~~lFy~f~es~~--~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDq 176 (493)
+.+....|..+-.|++..+. .....|+||+.+||||.+... ++..+ -.+|...-=++.+=.
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~----------------~~~l~~rG~~v~~~n 481 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFS----------------RLSLLDRGFVYAIVH 481 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHH----------------HHHHHHCCcEEEEEE
Confidence 44444567777776665332 235569999999999998652 22111 123444433333333
Q ss_pred CCCcccccCCCC--C-CCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCcee
Q 011108 177 PAGVGFSYSSTK--S-DYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVI 253 (493)
Q Consensus 177 P~GvGfSy~~~~--~-~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~i 253 (493)
+.|-| .|+..- . ... .-...-+|+..... |+..-.--...++.|.|-||||..+-..+.+ + +-
T Consensus 482 ~RGs~-g~G~~w~~~g~~~--~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~---~-------Pd 547 (686)
T PRK10115 482 VRGGG-ELGQQWYEDGKFL--KKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLMGVAINQ---R-------PE 547 (686)
T ss_pred cCCCC-ccCHHHHHhhhhh--cCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHHHHHHhc---C-------hh
Confidence 67755 444210 0 010 11135667776554 4433333345689999999999865544422 1 34
Q ss_pred eeeeeEecCCccCccc
Q 011108 254 NLKGIAIGNALIDGPT 269 (493)
Q Consensus 254 nLkGi~IGNg~id~~~ 269 (493)
.+++++.+.|++|...
T Consensus 548 lf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 548 LFHGVIAQVPFVDVVT 563 (686)
T ss_pred heeEEEecCCchhHhh
Confidence 5999999999999765
No 67
>PRK11460 putative hydrolase; Provisional
Probab=97.83 E-value=0.00074 Score=65.80 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=48.2
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
+.+|++.+|+.|.++|+...+...+.|+=.+ ...++.+++++||.+..+.-+.+.+.|++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g--------------------~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLG--------------------GDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCC--------------------CCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 5799999999999999999998888876111 14688889999999976555666666655
Q ss_pred HH
Q 011108 483 FL 484 (493)
Q Consensus 483 fl 484 (493)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 55
No 68
>PRK13604 luxD acyl transferase; Provisional
Probab=97.59 E-value=0.0026 Score=64.44 Aligned_cols=124 Identities=15% Similarity=0.220 Sum_probs=75.6
Q ss_pred CCceEEEEEEeCC-CCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccc
Q 011108 105 TGRSLFYYFAESP-QNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFS 183 (493)
Q Consensus 105 ~~~~lFy~f~es~-~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfS 183 (493)
.|..|.=|+.+.+ +++..+|+||..+| .|+....+--+ -.+=+.+=.|+|-.|.-.|+|-|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~-----------------A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGL-----------------AEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHH-----------------HHHHHHCCCEEEEecCCCCCCCC
Confidence 4678888888875 34566788888886 55543211111 12334566889999964456988
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
-++ -.+. +.....+|+.. ..+|+++. ...+++|.|+|.||..+...|. ..+++++++..|
T Consensus 80 ~G~-~~~~---t~s~g~~Dl~a-aid~lk~~---~~~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~sp 139 (307)
T PRK13604 80 SGT-IDEF---TMSIGKNSLLT-VVDWLNTR---GINNLGLIAASLSARIAYEVIN------------EIDLSFLITAVG 139 (307)
T ss_pred CCc-cccC---cccccHHHHHH-HHHHHHhc---CCCceEEEEECHHHHHHHHHhc------------CCCCCEEEEcCC
Confidence 432 2222 11112456544 34455543 2357999999999988544442 123888999888
Q ss_pred ccC
Q 011108 264 LID 266 (493)
Q Consensus 264 ~id 266 (493)
+.+
T Consensus 140 ~~~ 142 (307)
T PRK13604 140 VVN 142 (307)
T ss_pred ccc
Confidence 876
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.49 E-value=0.0011 Score=66.25 Aligned_cols=130 Identities=11% Similarity=0.057 Sum_probs=83.0
Q ss_pred CceEEEEEEeCCCCCCCCCEEEEEcCCCC---hhhhhhhhhhhcCCeEEcCCCCccccCCCCcc-ccccEEEEeCCCCcc
Q 011108 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPG---CSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANVVFLESPAGVG 181 (493)
Q Consensus 106 ~~~lFy~f~es~~~~~~~PlvlWLnGGPG---cSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn-~~anvLfiDqP~GvG 181 (493)
...+|.|+++.... ..+|+||.+||-.+ ++.-.+..+. ..+. +-.+++-+|. .|.|
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la------------------~~La~~Gy~Vl~~Dl-~G~G 68 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQA------------------RAFAAGGFGVLQIDL-YGCG 68 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHH------------------HHHHHCCCEEEEECC-CCCC
Confidence 45688888876532 34799999998532 1111011111 0122 3478999995 8999
Q ss_pred cccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEec
Q 011108 182 FSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIG 261 (493)
Q Consensus 182 fSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IG 261 (493)
.|-.... + .+.+..++|+..+ .+|++.. ...+++|.|+|+||..+..+|.+. +..++++++-
T Consensus 69 ~S~g~~~-~---~~~~~~~~Dv~~a-i~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~----------p~~v~~lVL~ 130 (266)
T TIGR03101 69 DSAGDFA-A---ARWDVWKEDVAAA-YRWLIEQ---GHPPVTLWGLRLGALLALDAANPL----------AAKCNRLVLW 130 (266)
T ss_pred CCCCccc-c---CCHHHHHHHHHHH-HHHHHhc---CCCCEEEEEECHHHHHHHHHHHhC----------ccccceEEEe
Confidence 9864322 1 1445566777664 4456543 246899999999999998887553 2348889999
Q ss_pred CCccCcccccch
Q 011108 262 NALIDGPTRSMG 273 (493)
Q Consensus 262 Ng~id~~~~~~~ 273 (493)
+|+++.......
T Consensus 131 ~P~~~g~~~l~~ 142 (266)
T TIGR03101 131 QPVVSGKQQLQQ 142 (266)
T ss_pred ccccchHHHHHH
Confidence 998886654433
No 70
>PRK11071 esterase YqiA; Provisional
Probab=97.39 E-value=0.0026 Score=60.11 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=44.9
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
..+|+|.+|+.|-+||+..+....+.. ..+.++||+|.- ...++.+..+..
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~---------------------------~~~~~~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC---------------------------RQTVEEGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc---------------------------ceEEECCCCcch--hhHHHhHHHHHH
Confidence 578999999999999999888877632 446789999998 344899999999
Q ss_pred HHc
Q 011108 483 FLH 485 (493)
Q Consensus 483 fl~ 485 (493)
|+.
T Consensus 187 fl~ 189 (190)
T PRK11071 187 FLG 189 (190)
T ss_pred Hhc
Confidence 975
No 71
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.37 E-value=0.0008 Score=64.35 Aligned_cols=28 Identities=18% Similarity=0.033 Sum_probs=24.5
Q ss_pred ceEEEEecCCccccCchhHHHHHHHCCC
Q 011108 404 IRVWIYSGDVDGIVPTTASRYSINALNL 431 (493)
Q Consensus 404 irVliysGd~D~ivp~~gt~~~i~~L~w 431 (493)
-+++|++|+.|.+||....+...+.|+-
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 4578999999999999999999888763
No 72
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.37 E-value=0.00046 Score=67.93 Aligned_cols=110 Identities=21% Similarity=0.361 Sum_probs=78.7
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHH
Q 011108 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (493)
..-|+++.+||| |.|.|.+..|.- .+..+ . ..-++-+| -.|.|-|-..+..|+ +-+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~--~---~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS-----------ELKSK--I---RCRCLALD-LRGHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH-----------HHHhh--c---ceeEEEee-ccccCccccCChhhc---CHHHHH
Confidence 456999999998 888887766651 11111 1 12248899 799999988877775 678899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 201 ~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
+|+...+++||..-| .+++|.|||+||-.+.+.|..= .--+|.|+.+.+=+
T Consensus 131 KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k---------~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 131 KDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASK---------TLPSLAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhh---------hchhhhceEEEEEe
Confidence 999999998885432 3599999999999886655421 23348888877633
No 73
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.12 E-value=0.0024 Score=61.29 Aligned_cols=59 Identities=22% Similarity=0.323 Sum_probs=42.7
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
+++|++.+|+.|.++|....+...+.|+=.+ .+++|.+++|.||.++ .+.+..+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~--------------------~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAG--------------------ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT---------------------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcC--------------------CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 5899999999999999998888777765111 1579999999999996 466777777
Q ss_pred HHc
Q 011108 483 FLH 485 (493)
Q Consensus 483 fl~ 485 (493)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 775
No 74
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.06 E-value=0.0033 Score=71.54 Aligned_cols=144 Identities=20% Similarity=0.140 Sum_probs=80.6
Q ss_pred EEEEEEecCCCCceEEEEEEeCCC--CCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCcc-ccccE
Q 011108 95 YAGYVTVDPKTGRSLFYYFAESPQ--NSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANV 171 (493)
Q Consensus 95 ysGyv~v~~~~~~~lFy~f~es~~--~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn-~~anv 171 (493)
.-+-+.+ .|-.+++++.-.++ +.+.-||+++..|||| |-.-.+. | .+..|.+.+. .-+=|
T Consensus 499 ~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~-sq~v~~~------~-------~~~~~~~~~s~~g~~v 561 (755)
T KOG2100|consen 499 EFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPG-SQSVTSK------F-------SVDWNEVVVSSRGFAV 561 (755)
T ss_pred eeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCC-cceeeee------E-------EecHHHHhhccCCeEE
Confidence 3444444 24566677776653 2345699999999998 3221000 1 1223333333 23668
Q ss_pred EEEeCCCCcccccCCC-CCCCccCChHHHHHHHHHHHHHHHHHCCCCCC-CCEEEEeccccccchHHHHHHHHHcccCCC
Q 011108 172 VFLESPAGVGFSYSST-KSDYELNGDKLTAQDSYTFLVNWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLNNKNTK 249 (493)
Q Consensus 172 LfiDqP~GvGfSy~~~-~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~-~~fyI~GESYgG~YvP~lA~~I~~~n~~~~ 249 (493)
+-|| ++|+|+.=..- ...+...++. -.+|.....+.+.+.+ +-. .++.|+|.||||... ..++.+.+
T Consensus 562 ~~vd-~RGs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGGy~t----~~~l~~~~--- 630 (755)
T KOG2100|consen 562 LQVD-GRGSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGGYLT----LKLLESDP--- 630 (755)
T ss_pred EEEc-CCCcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc--cccHHHeEEeccChHHHHH----HHHhhhCc---
Confidence 8999 89999753211 1111112333 3566677676666665 544 469999999999744 33433321
Q ss_pred CceeeeeeeEecCCccCcc
Q 011108 250 NTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 250 ~~~inLkGi~IGNg~id~~ 268 (493)
.--+|.-+..+|++|..
T Consensus 631 --~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 631 --GDVFKCGVAVAPVTDWL 647 (755)
T ss_pred --CceEEEEEEecceeeee
Confidence 12255546666666643
No 75
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.06 E-value=0.029 Score=61.26 Aligned_cols=86 Identities=10% Similarity=-0.013 Sum_probs=52.4
Q ss_pred cccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC
Q 011108 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
-..|+-|| -.|.|.|....+ -++-+.+++.++|....+. ....+++++|+|.||..+...+.......
T Consensus 220 Gf~V~~iD-wrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~-- 287 (532)
T TIGR01838 220 GHTVFVIS-WRNPDASQADKT------FDDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARG-- 287 (532)
T ss_pred CcEEEEEE-CCCCCcccccCC------hhhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhC--
Confidence 35788888 578887743211 1222334455666655543 35678999999999998765332222221
Q ss_pred CCCceeeeeeeEecCCccCcc
Q 011108 248 TKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 248 ~~~~~inLkGi~IGNg~id~~ 268 (493)
.+-.++++++.+..+|..
T Consensus 288 ---~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 288 ---DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred ---CCCccceEEEEecCcCCC
Confidence 022478888888777754
No 76
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.95 E-value=0.024 Score=58.52 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=48.8
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccCh---HHHH
Q 011108 401 ASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQP---ERAL 477 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP---~~al 477 (493)
+...||++++|+.|.++|...++.+.+.+.- ...++.++. +||+.+.+.| +.+.
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~-~gH~~~~~~~~~~~~v~ 340 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSS----------------------EDYTELSFP-GGHIGIYVSGKAQKEVP 340 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCC----------------------CCeEEEEcC-CCCEEEEECchhHhhhh
Confidence 3469999999999999999999988887651 123566665 8999998876 6677
Q ss_pred HHHHHHHcC
Q 011108 478 TLISSFLHG 486 (493)
Q Consensus 478 ~l~~~fl~g 486 (493)
.-+..||..
T Consensus 341 ~~i~~wl~~ 349 (350)
T TIGR01836 341 PAIGKWLQA 349 (350)
T ss_pred HHHHHHHHh
Confidence 777777754
No 77
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.95 E-value=0.00093 Score=66.94 Aligned_cols=113 Identities=16% Similarity=0.218 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHH
Q 011108 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (493)
.++|++|++||-.|.....+ +.. + .+.+.-....||+.+|-+.+..-.|.. . ..+...++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~--~~~------------l-~~~ll~~~~~nVi~vD~~~~~~~~y~~--a---~~~~~~v~ 93 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESW--ISD------------L-RKAYLSRGDYNVIVVDWGRGANPNYPQ--A---VNNTRVVG 93 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcH--HHH------------H-HHHHHhcCCCEEEEEECccccccChHH--H---HHhHHHHH
Confidence 56799999999766541101 000 0 011111245899999965442111211 0 01344567
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 201 ~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
+++..+|....+.. .+...+++|+|+|+|||.+-.+|.+..+ +++.|+..+|.
T Consensus 94 ~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa 146 (275)
T cd00707 94 AELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCC
Confidence 77777776655543 3445689999999999999988876522 47888887665
No 78
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.94 E-value=0.035 Score=56.18 Aligned_cols=61 Identities=23% Similarity=0.257 Sum_probs=50.5
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHH
Q 011108 402 SGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLIS 481 (493)
Q Consensus 402 ~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~ 481 (493)
...+|++..|-.+.-+|..-.....+... ...+..+++|||+|..|+|+...+++.
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~fp------------------------~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKIFP------------------------NVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHhcc------------------------chheeecccCCceeecCCHHHHHHHHH
Confidence 36899999999999998876655554433 457788999999999999999999999
Q ss_pred HHHcC
Q 011108 482 SFLHG 486 (493)
Q Consensus 482 ~fl~g 486 (493)
.|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 99864
No 79
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.79 E-value=0.011 Score=59.10 Aligned_cols=126 Identities=18% Similarity=0.275 Sum_probs=72.9
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCcccccc-----EEEEeC---
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVAN-----VVFLES--- 176 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~an-----vLfiDq--- 176 (493)
.+...-||++.-..-++.+||||.|||+=|..+- + .+-..|++.|. |+|-|+
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~-------------------~~~sg~d~lAd~~gFlV~yPdg~~~ 102 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-Q-------------------LHGTGWDALADREGFLVAYPDGYDR 102 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHH-h-------------------hcccchhhhhcccCcEEECcCcccc
Confidence 3566779999887778888999999998655443 1 12334554432 444432
Q ss_pred ---CCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCcee
Q 011108 177 ---PAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVI 253 (493)
Q Consensus 177 ---P~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~i 253 (493)
+-|.|-++...+. . .+...+..+.+.+.....+| ......+||+|-|-||.++-.|+... +-
T Consensus 103 ~wn~~~~~~~~~p~~~--~--~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~----------p~ 167 (312)
T COG3509 103 AWNANGCGNWFGPADR--R--RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEY----------PD 167 (312)
T ss_pred ccCCCcccccCCcccc--c--CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcC----------cc
Confidence 4455555432210 0 11112222333222223333 34566899999999999887777543 22
Q ss_pred eeeeeEecCCcc
Q 011108 254 NLKGIAIGNALI 265 (493)
Q Consensus 254 nLkGi~IGNg~i 265 (493)
-+.+|++..|..
T Consensus 168 ~faa~A~VAg~~ 179 (312)
T COG3509 168 IFAAIAPVAGLL 179 (312)
T ss_pred cccceeeeeccc
Confidence 277777777766
No 80
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.76 E-value=0.014 Score=57.16 Aligned_cols=64 Identities=22% Similarity=0.306 Sum_probs=49.3
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
..||||++|..|-++|+.-.++..+..+ +.....+|+||||.-..--| .-++.+++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k-----------------------~~~epl~v~g~gH~~~~~~~-~yi~~l~~ 247 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK-----------------------EKVEPLWVKGAGHNDIELYP-EYIEHLRR 247 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc-----------------------ccCCCcEEecCCCcccccCH-HHHHHHHH
Confidence 4799999999999999998877776644 12567899999999877666 56677777
Q ss_pred HHcCCCCC
Q 011108 483 FLHGILPP 490 (493)
Q Consensus 483 fl~g~~~p 490 (493)
|+.....+
T Consensus 248 f~~~~~~~ 255 (258)
T KOG1552|consen 248 FISSVLPS 255 (258)
T ss_pred HHHHhccc
Confidence 77655443
No 81
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.70 E-value=0.054 Score=61.96 Aligned_cols=100 Identities=22% Similarity=0.301 Sum_probs=67.5
Q ss_pred CCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCC--------------CCCCCCEEEEe
Q 011108 161 NNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFP--------------QYKKRDFYIAG 226 (493)
Q Consensus 161 N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP--------------~y~~~~fyI~G 226 (493)
++|=-.+=++|++.| .+|+|-|-+.-.. ...+..+|.++ +.+|+...+ .+.+-++-++|
T Consensus 272 ~~~~~~rGYaVV~~D-~RGtg~SeG~~~~-----~~~~E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G 344 (767)
T PRK05371 272 NDYFLPRGFAVVYVS-GIGTRGSDGCPTT-----GDYQEIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTG 344 (767)
T ss_pred HHHHHhCCeEEEEEc-CCCCCCCCCcCcc-----CCHHHHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEEE
Confidence 333334568999999 6999999775321 33445667666 556887421 12246899999
Q ss_pred ccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccchhhhhhhhccCC
Q 011108 227 ESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALN 284 (493)
Q Consensus 227 ESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~~gli 284 (493)
.||+|...-.+|..- +-.||.|+-..|+.+ +++|++..|++
T Consensus 345 ~SY~G~~~~~aAa~~----------pp~LkAIVp~a~is~-------~yd~yr~~G~~ 385 (767)
T PRK05371 345 KSYLGTLPNAVATTG----------VEGLETIIPEAAISS-------WYDYYRENGLV 385 (767)
T ss_pred EcHHHHHHHHHHhhC----------CCcceEEEeeCCCCc-------HHHHhhcCCce
Confidence 999999887777532 345999998887766 34555566643
No 82
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.56 E-value=0.0092 Score=63.54 Aligned_cols=81 Identities=19% Similarity=0.128 Sum_probs=53.6
Q ss_pred cccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC
Q 011108 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
.+|||-+|-| |-|-|.-.... .+...+|+++.+||....+.. .+.-.+++|.|+|+|||.+-.+|.+.
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~----~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~------ 140 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSA----AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT------ 140 (442)
T ss_pred CCEEEEEECC-CcCCCCCcccc----ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC------
Confidence 4899999975 44544211111 144677888888776544433 45567899999999999888877543
Q ss_pred CCCceeeeeeeEecCCc
Q 011108 248 TKNTVINLKGIAIGNAL 264 (493)
Q Consensus 248 ~~~~~inLkGi~IGNg~ 264 (493)
+-.|.+|.+-+|.
T Consensus 141 ----p~rV~rItgLDPA 153 (442)
T TIGR03230 141 ----KHKVNRITGLDPA 153 (442)
T ss_pred ----CcceeEEEEEcCC
Confidence 2237777777764
No 83
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.52 E-value=0.026 Score=58.08 Aligned_cols=148 Identities=18% Similarity=0.216 Sum_probs=90.2
Q ss_pred eEEEEEEecCCCCceEEEEEEeCCCC-C-CCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCcc-cccc
Q 011108 94 QYAGYVTVDPKTGRSLFYYFAESPQN-S-STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVAN 170 (493)
Q Consensus 94 ~ysGyv~v~~~~~~~lFy~f~es~~~-~-~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn-~~an 170 (493)
.++.=|+++ ....++-+.|..... + ..+|+|||+|||--|-+.. + ...+.+-.++. +.+|
T Consensus 61 v~~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--------------~-~~~y~~~~~~~a~~~~ 123 (336)
T KOG1515|consen 61 VTSKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--------------N-SPAYDSFCTRLAAELN 123 (336)
T ss_pred ceeeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--------------C-CchhHHHHHHHHHHcC
Confidence 344555554 347799999987653 3 5899999999997776642 0 01222222333 5566
Q ss_pred EEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHH-HHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCC
Q 011108 171 VVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVN-WLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTK 249 (493)
Q Consensus 171 vLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~-f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~ 249 (493)
.+-|= |+|--+.+ ..++. .-++.-+.+.-++.+ |+...=..+ +++|+|.|-||-.+-.+|.+..+..
T Consensus 124 ~vvvS----VdYRLAPE-h~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~---- 191 (336)
T KOG1515|consen 124 CVVVS----VDYRLAPE-HPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK---- 191 (336)
T ss_pred eEEEe----cCcccCCC-CCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----
Confidence 65543 44443322 22432 222222222233333 665543333 4999999999999999999998753
Q ss_pred CceeeeeeeEecCCccCcccc
Q 011108 250 NTVINLKGIAIGNALIDGPTR 270 (493)
Q Consensus 250 ~~~inLkGi~IGNg~id~~~~ 270 (493)
...+.|+|+++.-|++....-
T Consensus 192 ~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 192 LSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred CCCcceEEEEEEecccCCCCC
Confidence 136789999999888776543
No 84
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.41 E-value=0.016 Score=57.96 Aligned_cols=247 Identities=15% Similarity=0.180 Sum_probs=121.6
Q ss_pred CCCEEEEEcC-CCChhh-hhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHH
Q 011108 122 TNPLLLWLNG-GPGCSS-LGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (493)
Q Consensus 122 ~~PlvlWLnG-GPGcSS-l~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (493)
++|.+|=.+- |.-.-| . -++|.- | .-..-.+.+-++-|| +.|-..--..-.++|.--+.++.
T Consensus 22 ~kp~ilT~HDvGlNh~scF-~~ff~~--~------------~m~~i~~~f~i~Hi~-aPGqe~ga~~~p~~y~yPsmd~L 85 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCF-QGFFNF--E------------DMQEILQNFCIYHID-APGQEEGAATLPEGYQYPSMDQL 85 (283)
T ss_dssp TS-EEEEE--TT--HHHHC-HHHHCS--H------------HHHHHHTTSEEEEEE--TTTSTT-----TT-----HHHH
T ss_pred CCceEEEeccccccchHHH-HHHhcc--h------------hHHHHhhceEEEEEe-CCCCCCCcccccccccccCHHHH
Confidence 7899999985 444444 2 133321 1 112234678899999 67777654444455332388899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccchhhhhhh
Q 011108 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLW 279 (493)
Q Consensus 200 A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~ 279 (493)
|+++-+.|..| +-+.+.=+|+--|......+|..- +-.+-|+++.|+... ..++.++++
T Consensus 86 Ae~l~~Vl~~f-------~lk~vIg~GvGAGAnIL~rfAl~~----------p~~V~GLiLvn~~~~----~~gw~Ew~~ 144 (283)
T PF03096_consen 86 AEMLPEVLDHF-------GLKSVIGFGVGAGANILARFALKH----------PERVLGLILVNPTCT----AAGWMEWFY 144 (283)
T ss_dssp HCTHHHHHHHH-------T---EEEEEETHHHHHHHHHHHHS----------GGGEEEEEEES---S-------HHHHHH
T ss_pred HHHHHHHHHhC-------CccEEEEEeeccchhhhhhccccC----------ccceeEEEEEecCCC----CccHHHHHH
Confidence 99988866633 335789999987776666677433 334889998876544 445555554
Q ss_pred h---------ccCCChhhhhchhcccccccCCCChHHHHHHHHHHHhhc-CCCccccCCCCcCCCCCcCCCCCCCCCCCC
Q 011108 280 T---------HALNSDQTHKGIFTYCDFAREGNDTKECETFLEKASDEI-GDIDIYNIYAPICINPAFQNGSIGSVHNYD 349 (493)
Q Consensus 280 ~---------~gli~~~~~~~i~~~C~~~~~~~~~~~C~~~~~~~~~~~-g~in~Yni~~~~C~~~~~~~~~~~~~~~~d 349 (493)
+ +|+- +...+.+.. --|.... ...-.++.+.+.+.. ..+|+-|+
T Consensus 145 ~K~~~~~L~~~gmt-~~~~d~Ll~-h~Fg~~~--~~~n~Dlv~~yr~~l~~~~Np~Nl---------------------- 198 (283)
T PF03096_consen 145 QKLSSWLLYSYGMT-SSVKDYLLW-HYFGKEE--EENNSDLVQTYRQHLDERINPKNL---------------------- 198 (283)
T ss_dssp HHHH-------CTT-S-HHHHHHH-HHS-HHH--HHCT-HHHHHHHHHHHT-TTHHHH----------------------
T ss_pred HHHhcccccccccc-cchHHhhhh-ccccccc--ccccHHHHHHHHHHHhcCCCHHHH----------------------
Confidence 3 2221 111111100 0010000 000011222222222 22333332
Q ss_pred CCchhHHHHHhChHHHHHHhccCCCCCcccCccccCCCCCCCcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHC
Q 011108 350 PCTDYYVEAYLNTREVQTVLHVKPTNWTACSNLFNWTDSPSTVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINAL 429 (493)
Q Consensus 350 pc~~~~~~~ylN~~~Vq~ALhv~~~~w~~cs~v~~~~d~~~s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L 429 (493)
..++..|.+|.|.-..+.. .+.|||++.|+.-.-.. .+...-..|
T Consensus 199 ---~~f~~sy~~R~DL~~~~~~------------------------------~~c~vLlvvG~~Sp~~~--~vv~~ns~L 243 (283)
T PF03096_consen 199 ---ALFLNSYNSRTDLSIERPS------------------------------LGCPVLLVVGDNSPHVD--DVVEMNSKL 243 (283)
T ss_dssp ---HHHHHHHHT-----SECTT------------------------------CCS-EEEEEETTSTTHH--HHHHHHHHS
T ss_pred ---HHHHHHHhccccchhhcCC------------------------------CCCCeEEEEecCCcchh--hHHHHHhhc
Confidence 1356777777654433211 14899999999854332 234455666
Q ss_pred CCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHHHHcCCC
Q 011108 430 NLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISSFLHGIL 488 (493)
Q Consensus 430 ~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~fl~g~~ 488 (493)
+= ..-|++.|.++|=+|-.+||+...+.|+-||+|.-
T Consensus 244 dp----------------------~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 244 DP----------------------TKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp -C----------------------CCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred Cc----------------------ccceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 51 13499999999999999999999999999999864
No 85
>PRK10162 acetyl esterase; Provisional
Probab=96.36 E-value=0.03 Score=57.18 Aligned_cols=63 Identities=11% Similarity=0.043 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 200 A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
+.+.+.++.+..+++ .....+++|+|+|.||+.+-.+|.+..+... .+..++|+++..|+++.
T Consensus 135 ~~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 334444444444333 2344689999999999999999887755421 13457889888888774
No 86
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.28 E-value=0.14 Score=51.72 Aligned_cols=69 Identities=25% Similarity=0.377 Sum_probs=54.8
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCc--ccChHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVP--SDQPERALTLI 480 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP--~dqP~~al~l~ 480 (493)
+.||+||+|..|.++|+..++..++++-=.|. .+++|.++.+++|+.. ...| .++.-|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~-------------------a~V~~~~~~~~~H~~~~~~~~~-~a~~Wl 278 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG-------------------ADVEYVRYPGGGHLGAAFASAP-DALAWL 278 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC-------------------CCEEEEecCCCChhhhhhcCcH-HHHHHH
Confidence 68999999999999999999999988652220 2589999999999965 4555 566777
Q ss_pred HHHHcCCCCCC
Q 011108 481 SSFLHGILPPS 491 (493)
Q Consensus 481 ~~fl~g~~~p~ 491 (493)
..-+.|++.++
T Consensus 279 ~~rf~G~~~~~ 289 (290)
T PF03583_consen 279 DDRFAGKPATS 289 (290)
T ss_pred HHHHCCCCCCC
Confidence 77778887764
No 87
>COG0400 Predicted esterase [General function prediction only]
Probab=96.27 E-value=0.089 Score=50.50 Aligned_cols=59 Identities=20% Similarity=0.302 Sum_probs=45.0
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
+.||++.+|..|.+||..-+++..+.|.=.+. +..+.++. .||.++. +.++.+++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~--------------------~v~~~~~~-~GH~i~~----e~~~~~~~ 200 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGA--------------------DVEVRWHE-GGHEIPP----EELEAARS 200 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCC--------------------CEEEEEec-CCCcCCH----HHHHHHHH
Confidence 79999999999999999999998887762222 45666777 9999975 45555555
Q ss_pred HHcC
Q 011108 483 FLHG 486 (493)
Q Consensus 483 fl~g 486 (493)
|+.+
T Consensus 201 wl~~ 204 (207)
T COG0400 201 WLAN 204 (207)
T ss_pred HHHh
Confidence 6654
No 88
>PLN00021 chlorophyllase
Probab=96.22 E-value=0.015 Score=59.35 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=68.8
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHH
Q 011108 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (493)
Q Consensus 120 ~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (493)
....|+||++||+.+.+.. |..+.+ .+. +| -+.|+.+|-+ | ++..+.. .+-+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~-g--~~~~~~~------~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY-T--LAGPDGT------DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC-C--cCCCCch------hhHHH
Confidence 3568999999999776554 433322 011 11 2567777753 3 3221111 22234
Q ss_pred HHHHHHHHHHHHHH-CC---CCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 200 AQDSYTFLVNWLER-FP---QYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 200 A~d~~~fL~~f~~~-fP---~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
+.++..+|.+-++. .| +....+++|+|+|+||+.+-.+|....+.. ....+++++..+|+...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccccc
Confidence 55666666654433 22 234467999999999999988886553321 23568898888887554
No 89
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.18 E-value=0.019 Score=48.78 Aligned_cols=65 Identities=26% Similarity=0.325 Sum_probs=53.0
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
..+||+.+|+.|.++|+.+.+...+.|. +-.++++.|+||-+-...=.-+.+++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~ 89 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDD 89 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHH
Confidence 4899999999999999999999999876 3478999999999985443566777777
Q ss_pred HHcCCCCCC
Q 011108 483 FLHGILPPS 491 (493)
Q Consensus 483 fl~g~~~p~ 491 (493)
||..-.+|.
T Consensus 90 yl~~G~lP~ 98 (103)
T PF08386_consen 90 YLLDGTLPA 98 (103)
T ss_pred HHHcCCCCC
Confidence 776555654
No 90
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.10 E-value=0.039 Score=56.60 Aligned_cols=129 Identities=17% Similarity=0.204 Sum_probs=70.6
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhh--hhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcc-
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYG--AMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVG- 181 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G--~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvG- 181 (493)
.|..++=|+..-++.....|.||.++|..|.+..-.. .+...|= =+|.+| +.|-|
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~---------------------~vl~~d-~rGqg~ 122 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGY---------------------AVLAMD-VRGQGG 122 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT----------------------EEEEE---TTTSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCe---------------------EEEEec-CCCCCC
Confidence 4566777777655445778999999998777543100 1222232 244555 45555
Q ss_pred cccC------CCCCCCccCC---------hHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHccc
Q 011108 182 FSYS------STKSDYELNG---------DKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNK 246 (493)
Q Consensus 182 fSy~------~~~~~~~~~~---------d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~ 246 (493)
.|-. ....++...+ -..+..|.+. ...|+...|+.-.+++.++|+|-||-..-.+|.. ..
T Consensus 123 ~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r-avd~l~slpevD~~rI~v~G~SqGG~lal~~aaL-d~--- 197 (320)
T PF05448_consen 123 RSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR-AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL-DP--- 197 (320)
T ss_dssp SS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH-HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH-SS---
T ss_pred CCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH-HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh-Cc---
Confidence 1110 0000110000 1234566666 4457788999999999999999999988777653 11
Q ss_pred CCCCceeeeeeeEecCCccCc
Q 011108 247 NTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 247 ~~~~~~inLkGi~IGNg~id~ 267 (493)
.+++++...|++.+
T Consensus 198 -------rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 198 -------RVKAAAADVPFLCD 211 (320)
T ss_dssp -------T-SEEEEESESSSS
T ss_pred -------cccEEEecCCCccc
Confidence 27778777766543
No 91
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.02 E-value=0.036 Score=61.01 Aligned_cols=131 Identities=19% Similarity=0.161 Sum_probs=81.9
Q ss_pred CCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCcc-ccccEEEEeCCCCcccc
Q 011108 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANVVFLESPAGVGFS 183 (493)
Q Consensus 105 ~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn-~~anvLfiDqP~GvGfS 183 (493)
.|..|+..++... +....|+||.++|-...+.... +.. . ....-|. +-+.|+-+| ..|.|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~~------~~~--------~-~~~~~l~~~Gy~vv~~D-~RG~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLRW------GLD--------K-TEPAWFVAQGYAVVIQD-TRGRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhcc------ccc--------c-ccHHHHHhCCcEEEEEe-ccccccC
Confidence 4677887766543 2346799999997533221100 000 0 0011122 458899999 5999999
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
-+.... + + ...++|+.+++ +|+.+-|. ...++.++|+||||..+-.+|.. + +-.||+++..++
T Consensus 68 ~g~~~~-~---~-~~~~~D~~~~i-~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~-------~~~l~aiv~~~~ 130 (550)
T TIGR00976 68 EGEFDL-L---G-SDEAADGYDLV-DWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---Q-------PPALRAIAPQEG 130 (550)
T ss_pred CCceEe-c---C-cccchHHHHHH-HHHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---C-------CCceeEEeecCc
Confidence 754221 1 2 45788888744 47776553 34689999999999876666542 1 235999999888
Q ss_pred ccCccc
Q 011108 264 LIDGPT 269 (493)
Q Consensus 264 ~id~~~ 269 (493)
..|...
T Consensus 131 ~~d~~~ 136 (550)
T TIGR00976 131 VWDLYR 136 (550)
T ss_pred ccchhH
Confidence 877443
No 92
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.36 E-value=0.054 Score=51.77 Aligned_cols=101 Identities=18% Similarity=0.184 Sum_probs=67.1
Q ss_pred EEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccc-cccEEEEeCCCCcccccCCCCCCCccCChHHHHHHH
Q 011108 125 LLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDS 203 (493)
Q Consensus 125 lvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~-~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~ 203 (493)
.|+++++|=|.++. |--+.. ...+ ..+|..|+ +.|-+- . .... .+-++.|++.
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~------------------~l~~~~~~v~~i~-~~~~~~---~--~~~~-~si~~la~~y 55 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLAR------------------ALPDDVIGVYGIE-YPGRGD---D--EPPP-DSIEELASRY 55 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHH------------------HHTTTEEEEEEEC-STTSCT---T--SHEE-SSHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHH------------------hCCCCeEEEEEEe-cCCCCC---C--CCCC-CCHHHHHHHH
Confidence 57899988776555 433321 0112 47889999 466651 1 1111 3778888877
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 204 ~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
.+.++ +.-|+ .|++|+|+|+||..+=.+|.++.++. ...+.+++.++.
T Consensus 56 ~~~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~ 103 (229)
T PF00975_consen 56 AEAIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSP 103 (229)
T ss_dssp HHHHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCS
T ss_pred HHHhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCC
Confidence 76665 33322 39999999999999999999987764 347788888754
No 93
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.25 E-value=0.43 Score=46.61 Aligned_cols=59 Identities=19% Similarity=0.233 Sum_probs=47.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
..+|.++.|+.|.+|...-...|-+..+ +.+++-++ ..|||-+.+|.+..+..+.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~l~~f-dGgHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFTLRVF-DGGHFFLNQQREEVLARLEQ 231 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCceEEEe-cCcceehhhhHHHHHHHHHH
Confidence 6899999999999999886666665433 24555554 55999999999999999998
Q ss_pred HHc
Q 011108 483 FLH 485 (493)
Q Consensus 483 fl~ 485 (493)
.+.
T Consensus 232 ~l~ 234 (244)
T COG3208 232 HLA 234 (244)
T ss_pred Hhh
Confidence 885
No 94
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.97 E-value=0.086 Score=51.08 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=36.5
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 204 ~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
...|.+.+......-.+++|++|.|-||...-.||... +--+.++++..|.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~----------pd~faa~a~~sG~ 131 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY----------PDLFAAVAVVSGV 131 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC----------CccceEEEeeccc
Confidence 33445555544456677899999999999888888655 3347888887765
No 95
>COG1647 Esterase/lipase [General function prediction only]
Probab=94.94 E-value=0.14 Score=49.23 Aligned_cols=62 Identities=18% Similarity=0.335 Sum_probs=51.2
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccC-hHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQ-PERALTLIS 481 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dq-P~~al~l~~ 481 (493)
-.+++|..|..|-++|..+.....+.+.-.-+ .+.+..++||-+-.|. .+...+-+-
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~K----------------------eL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESDDK----------------------ELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCCcc----------------------eeEEEccCCceeecchhHHHHHHHHH
Confidence 58999999999999999999999999874444 6788999999998876 456667777
Q ss_pred HHHcC
Q 011108 482 SFLHG 486 (493)
Q Consensus 482 ~fl~g 486 (493)
+||.+
T Consensus 239 ~FL~~ 243 (243)
T COG1647 239 TFLEK 243 (243)
T ss_pred HHhhC
Confidence 77753
No 96
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.85 E-value=1.2 Score=48.29 Aligned_cols=87 Identities=23% Similarity=0.350 Sum_probs=65.2
Q ss_pred cHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEe-cCeEEEEEcCCCccC--
Q 011108 392 VLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAY-QGLTLVTVRGAGHLV-- 468 (493)
Q Consensus 392 ~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y-~~Ltf~tV~gAGH~v-- 468 (493)
.-|.|....++|=|+++|+|..|.++|..+|..+.+++.-. .+|-...- +=+.|..|+|.||--
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~-------------~g~~~~~v~dF~RlF~vPGm~HC~gG 408 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVAR-------------MGGALADVDDFYRLFMVPGMGHCGGG 408 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHh-------------cccccccccceeEEEecCCCcccCCC
Confidence 34678888889999999999999999999999999886511 11111111 125789999999985
Q ss_pred cccChHHHHHHHHHHHcCCCCCC
Q 011108 469 PSDQPERALTLISSFLHGILPPS 491 (493)
Q Consensus 469 P~dqP~~al~l~~~fl~g~~~p~ 491 (493)
|-..|-.+|..+.+|+.+-.-|+
T Consensus 409 ~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 409 PGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCCCCCCHHHHHHHHHhCCCCCC
Confidence 44567789999999998766564
No 97
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.69 E-value=0.26 Score=49.08 Aligned_cols=123 Identities=15% Similarity=0.232 Sum_probs=81.6
Q ss_pred CCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCC--CCCccCChHHHH
Q 011108 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTK--SDYELNGDKLTA 200 (493)
Q Consensus 123 ~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~--~~~~~~~d~~~A 200 (493)
+++++|+-|=||.-.. |--|.+ .|..+- +....|+=+.. +|.-.+..+.. .+....+-++..
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish-~Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISH-AGHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecC-CCCcCCcccccccCCCCccCHHHHH
Confidence 6899999999999988 766654 344332 55666776664 55444433310 011224888889
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCccc
Q 011108 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (493)
Q Consensus 201 ~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~ 269 (493)
+.-++||.++....+ ..+.+++|.|||-|+..+-.+..+.. ....+++++++-=|.|....
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-------~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-------DLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-------ccCCceeEEEEeCCcccccc
Confidence 999999998887643 25679999999998876666665553 12456777776666665443
No 98
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.19 E-value=0.14 Score=49.17 Aligned_cols=120 Identities=22% Similarity=0.297 Sum_probs=79.2
Q ss_pred eEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCC
Q 011108 108 SLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSST 187 (493)
Q Consensus 108 ~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~ 187 (493)
.|.=|.+.+++ +.|.+|.++|--|- || -+.- ..+ .++. +=..||+-+|- .|-|.|.+..
T Consensus 66 tL~a~~~~~E~---S~pTlLyfh~NAGN--mG--hr~~------i~~--~fy~-----~l~mnv~ivsY-RGYG~S~Gsp 124 (300)
T KOG4391|consen 66 TLDAYLMLSES---SRPTLLYFHANAGN--MG--HRLP------IAR--VFYV-----NLKMNVLIVSY-RGYGKSEGSP 124 (300)
T ss_pred eEeeeeecccC---CCceEEEEccCCCc--cc--chhh------HHH--HHHH-----HcCceEEEEEe-eccccCCCCc
Confidence 45455555443 78999999987554 32 2211 000 0111 23578999995 9999998765
Q ss_pred CCC-CccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 188 KSD-YELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 188 ~~~-~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
+.. .. .|.++| ..++-..|...++++++.|.|-||.-+-.+|++-.+ .+.++++-|-+++
T Consensus 125 sE~GL~--lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~----------ri~~~ivENTF~S 185 (300)
T KOG4391|consen 125 SEEGLK--LDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD----------RISAIIVENTFLS 185 (300)
T ss_pred ccccee--ccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEeeccchh----------heeeeeeechhcc
Confidence 532 21 344333 334556788999999999999999999888875433 4889999987766
Q ss_pred c
Q 011108 267 G 267 (493)
Q Consensus 267 ~ 267 (493)
-
T Consensus 186 I 186 (300)
T KOG4391|consen 186 I 186 (300)
T ss_pred c
Confidence 4
No 99
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=94.06 E-value=0.39 Score=45.67 Aligned_cols=61 Identities=15% Similarity=0.065 Sum_probs=47.5
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
.++++|.+|..|..|+-... -||..+. ..-.+...+..+|....--|+....++..
T Consensus 216 kcPtli~hG~kDp~~~~~hv-~fi~~~~-----------------------~~a~~~~~peGkHn~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 216 KCPTLIMHGGKDPFCGDPHV-CFIPVLK-----------------------SLAKVEIHPEGKHNFHLRYAKEFNKLVLD 271 (277)
T ss_pred cCCeeEeeCCcCCCCCCCCc-cchhhhc-----------------------ccceEEEccCCCcceeeechHHHHHHHHH
Confidence 69999999999999986633 2333222 12356778899999999999999999999
Q ss_pred HHcCC
Q 011108 483 FLHGI 487 (493)
Q Consensus 483 fl~g~ 487 (493)
|++..
T Consensus 272 Fl~~~ 276 (277)
T KOG2984|consen 272 FLKST 276 (277)
T ss_pred HHhcc
Confidence 99764
No 100
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.05 E-value=0.24 Score=51.90 Aligned_cols=132 Identities=20% Similarity=0.296 Sum_probs=80.8
Q ss_pred EEEEecCCCCceEEEEEEeCCC----CCCCCCEEEEEcCCCChhhhh-----hhhhhhcCCeEEcCCCCccccCCCCccc
Q 011108 97 GYVTVDPKTGRSLFYYFAESPQ----NSSTNPLLLWLNGGPGCSSLG-----YGAMSELGPFRVNKDGKTLFRNNYAWNN 167 (493)
Q Consensus 97 Gyv~v~~~~~~~lFy~f~es~~----~~~~~PlvlWLnGGPGcSSl~-----~G~f~E~GP~~v~~~~~~l~~N~~sWn~ 167 (493)
=+|...+ .|.-..=|+..... +..++|+||.|.|=.|.|.-. ....++.| |++
T Consensus 96 eii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~---------------- 157 (409)
T KOG1838|consen 96 EIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV---------------- 157 (409)
T ss_pred EEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE----------------
Confidence 3444432 23334446554332 357889999999988888632 23345555 332
Q ss_pred cccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC
Q 011108 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
+-.- +.|.|-|--++..-|.. + -.+|+-++++---++||+ +++|.+|.|+||..+- .++-+..+
T Consensus 158 ----VVfN-~RG~~g~~LtTpr~f~a-g---~t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~iL~---nYLGE~g~- 221 (409)
T KOG1838|consen 158 ----VVFN-HRGLGGSKLTTPRLFTA-G---WTEDLREVVNHIKKRYPQ---APLFAVGFSMGGNILT---NYLGEEGD- 221 (409)
T ss_pred ----EEEC-CCCCCCCccCCCceeec-C---CHHHHHHHHHHHHHhCCC---CceEEEEecchHHHHH---HHhhhccC-
Confidence 2222 79999998776665542 3 245666666655577776 6899999999998654 33333222
Q ss_pred CCCceeeeeeeEecCCcc
Q 011108 248 TKNTVINLKGIAIGNALI 265 (493)
Q Consensus 248 ~~~~~inLkGi~IGNg~i 265 (493)
+. -=..|++|-|||-
T Consensus 222 --~~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 222 --NT-PLIAAVAVCNPWD 236 (409)
T ss_pred --CC-CceeEEEEeccch
Confidence 12 2378888888883
No 101
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=93.94 E-value=0.11 Score=45.36 Aligned_cols=42 Identities=33% Similarity=0.457 Sum_probs=34.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCcc
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHL 467 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~ 467 (493)
.+||++..|+.|.++|....+...+.++ ..-+++.|.|++|+
T Consensus 104 ~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------GPKELYIIPGAGHF 145 (145)
T ss_dssp TSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------SSEEEEEETTS-TT
T ss_pred CCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------CCcEEEEeCCCcCc
Confidence 4699999999999999999999888877 13378999999996
No 102
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.76 E-value=0.26 Score=53.21 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHH
Q 011108 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAY 239 (493)
Q Consensus 200 A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~ 239 (493)
....++++++-.+.|- -..+++.|+|||+||+.+-.++.
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhh
Confidence 3344556666666663 35568999999999987655443
No 103
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=93.60 E-value=0.3 Score=52.01 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=66.9
Q ss_pred ccccEEEEeCCCCcccccCCCC---CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHH
Q 011108 167 NVANVVFLESPAGVGFSYSSTK---SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (493)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~---~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~ 243 (493)
-.|-|++|| .+=-|-|..... ..+.--+.+|+-+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+..
T Consensus 58 ~~a~~v~lE-HRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP- 135 (434)
T PF05577_consen 58 FGALVVALE-HRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP- 135 (434)
T ss_dssp HTEEEEEE---TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T-
T ss_pred cCCcEEEee-hhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC-
Confidence 357799999 588888874221 122224889999999999999888887667789999999999987776666552
Q ss_pred cccCCCCceeeeeeeEecCCccCcccccchhhhh
Q 011108 244 NNKNTKNTVINLKGIAIGNALIDGPTRSMGVYEN 277 (493)
Q Consensus 244 ~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~ 277 (493)
--+.|.+--.|.+....+...+.+.
T Consensus 136 ---------~~~~ga~ASSapv~a~~df~~y~~~ 160 (434)
T PF05577_consen 136 ---------HLFDGAWASSAPVQAKVDFWEYFEV 160 (434)
T ss_dssp ---------TT-SEEEEET--CCHCCTTTHHHHH
T ss_pred ---------CeeEEEEeccceeeeecccHHHHHH
Confidence 2377888888888877766655553
No 104
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=92.81 E-value=0.15 Score=50.77 Aligned_cols=84 Identities=24% Similarity=0.175 Sum_probs=60.7
Q ss_pred cccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC
Q 011108 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
=..+|..| ..|+|-|.+.-.. ...+.++|.++ +.+|+.+-|-- +-++-++|.||+|......|..-
T Consensus 57 GY~vV~~D-~RG~g~S~G~~~~-----~~~~e~~D~~d-~I~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~------ 122 (272)
T PF02129_consen 57 GYAVVVQD-VRGTGGSEGEFDP-----MSPNEAQDGYD-TIEWIAAQPWS-NGKVGMYGISYGGFTQWAAAARR------ 122 (272)
T ss_dssp T-EEEEEE--TTSTTS-S-B-T-----TSHHHHHHHHH-HHHHHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT------
T ss_pred CCEEEEEC-CcccccCCCcccc-----CChhHHHHHHH-HHHHHHhCCCC-CCeEEeeccCHHHHHHHHHHhcC------
Confidence 46789999 6999999876432 25667888888 77899887444 44799999999999888887622
Q ss_pred CCCceeeeeeeEecCCccCccc
Q 011108 248 TKNTVINLKGIAIGNALIDGPT 269 (493)
Q Consensus 248 ~~~~~inLkGi~IGNg~id~~~ 269 (493)
+-.||.|+..-+..|...
T Consensus 123 ----~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 ----PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -----TTEEEEEEESE-SBTCC
T ss_pred ----CCCceEEEecccCCcccc
Confidence 445999999988877665
No 105
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=92.40 E-value=0.081 Score=55.67 Aligned_cols=83 Identities=17% Similarity=0.092 Sum_probs=55.6
Q ss_pred ccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHccc
Q 011108 167 NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNK 246 (493)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~ 246 (493)
+-.+||=+| =.|+|+|.... + + +..+-++..+..|+...|+.-..++.++|-|.||.|++.+|..=.
T Consensus 217 rGiA~LtvD-mPG~G~s~~~~---l---~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~---- 283 (411)
T PF06500_consen 217 RGIAMLTVD-MPGQGESPKWP---L---T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED---- 283 (411)
T ss_dssp CT-EEEEE---TTSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT----
T ss_pred CCCEEEEEc-cCCCcccccCC---C---C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc----
Confidence 446899999 58999985321 1 1 112345667888899999999999999999999999999986421
Q ss_pred CCCCceeeeeeeEecCCccCcc
Q 011108 247 NTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 247 ~~~~~~inLkGi~IGNg~id~~ 268 (493)
-.|||++.-.|.++..
T Consensus 284 ------~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 284 ------PRLKAVVALGAPVHHF 299 (411)
T ss_dssp ------TT-SEEEEES---SCG
T ss_pred ------cceeeEeeeCchHhhh
Confidence 2289987777666543
No 106
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=92.22 E-value=1.2 Score=45.07 Aligned_cols=47 Identities=19% Similarity=0.173 Sum_probs=38.2
Q ss_pred CCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCccc
Q 011108 217 YKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (493)
Q Consensus 217 y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~ 269 (493)
...+++.|+|+|-||+.+-.+|....+.. ....++.++..|++|...
T Consensus 149 ~dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 149 IDPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CCccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 34678999999999999999999886652 344788888899988776
No 107
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=92.04 E-value=1.8 Score=47.77 Aligned_cols=56 Identities=16% Similarity=0.125 Sum_probs=43.1
Q ss_pred HHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCc
Q 011108 394 PTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVP 469 (493)
Q Consensus 394 ~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP 469 (493)
-.+..|-+...|.++.+|-.|--|-+.-|...++.|.=.|| --....+++--|++-
T Consensus 793 ~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagK--------------------pyeL~IfP~ERHsiR 848 (867)
T KOG2281|consen 793 GHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGK--------------------PYELQIFPNERHSIR 848 (867)
T ss_pred HHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCC--------------------ceEEEEccccccccC
Confidence 34445555678999999999999999999999999874443 235678888888863
No 108
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=92.03 E-value=3.9 Score=41.18 Aligned_cols=63 Identities=24% Similarity=0.256 Sum_probs=47.2
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
..|||++.||.-.-+.. +...-.+|+= .+-|++.|.++|-++..+||....+-|+-
T Consensus 246 kc~vllvvGd~Sp~~~~--vv~~n~~Ldp----------------------~~ttllk~~d~g~l~~e~qP~kl~ea~~~ 301 (326)
T KOG2931|consen 246 KCPVLLVVGDNSPHVSA--VVECNSKLDP----------------------TYTTLLKMADCGGLVQEEQPGKLAEAFKY 301 (326)
T ss_pred cccEEEEecCCCchhhh--hhhhhcccCc----------------------ccceEEEEcccCCcccccCchHHHHHHHH
Confidence 58999999998533221 2222234441 13489999999999999999999999999
Q ss_pred HHcCCCC
Q 011108 483 FLHGILP 489 (493)
Q Consensus 483 fl~g~~~ 489 (493)
|+.|.-+
T Consensus 302 FlqG~Gy 308 (326)
T KOG2931|consen 302 FLQGMGY 308 (326)
T ss_pred HHccCCc
Confidence 9999764
No 109
>COG4099 Predicted peptidase [General function prediction only]
Probab=91.78 E-value=1.6 Score=44.01 Aligned_cols=46 Identities=17% Similarity=0.002 Sum_probs=30.7
Q ss_pred HHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 211 LERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 211 ~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
+...+..-..++|++|-|-||.-.=+++.+..+ -+.+.+...|--|
T Consensus 260 las~ynID~sRIYviGlSrG~~gt~al~~kfPd----------fFAaa~~iaG~~d 305 (387)
T COG4099 260 LASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD----------FFAAAVPIAGGGD 305 (387)
T ss_pred HhhccCcccceEEEEeecCcchhhHHHHHhCch----------hhheeeeecCCCc
Confidence 344556667789999999999887777765533 3555555544433
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=90.88 E-value=0.25 Score=46.50 Aligned_cols=63 Identities=19% Similarity=0.177 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHH---HCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 198 LTAQDSYTFLVNWLE---RFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~---~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
...+|+.+++.-..+ ++ ++...+++|+|+|-||+.+-.++.++.+.. ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 345555554433222 22 356679999999999999999998887764 1239999999999887
No 111
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.73 E-value=0.6 Score=40.95 Aligned_cols=62 Identities=18% Similarity=0.270 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
..+.+.+.|.++.++.| ..++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+.
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCcccc
Confidence 44566677777777765 56899999999999999999999887532 2466788888877663
No 112
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=90.72 E-value=0.46 Score=41.36 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=56.5
Q ss_pred EEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCcc-ccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHH
Q 011108 125 LLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDS 203 (493)
Q Consensus 125 lvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn-~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~ 203 (493)
+||++||+.|.... +..+.+ .+. +-.+++.+|. .|.|.+.. ...++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~------------------~l~~~G~~v~~~~~-~~~~~~~~-----------~~~~~~~ 49 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE------------------ALAEQGYAVVAFDY-PGHGDSDG-----------ADAVERV 49 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH------------------HHHHTTEEEEEESC-TTSTTSHH-----------SHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH------------------HHHHCCCEEEEEec-CCCCccch-----------hHHHHHH
Confidence 68999999776554 444443 112 2367888884 66665511 1123333
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 204 ~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
++.+. ...+ ..++++++|+|.||..+..++.+- ..+++++.-+|
T Consensus 50 ~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-----------~~v~~~v~~~~ 93 (145)
T PF12695_consen 50 LADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-----------PRVKAVVLLSP 93 (145)
T ss_dssp HHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-----------TTESEEEEESE
T ss_pred HHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-----------cceeEEEEecC
Confidence 33222 3333 567999999999999888877632 23777777666
No 113
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=90.38 E-value=0.41 Score=46.72 Aligned_cols=74 Identities=12% Similarity=0.123 Sum_probs=50.6
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCC-CCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCccc
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQY-KKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y-~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~ 269 (493)
.|.+.|...-..|..|++..-+. ..++++|.+||+|+..+-.....+...... ....-+|..|++.+|-+|...
T Consensus 67 ~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 67 YDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHHH
Confidence 44555555555566666554333 567999999999999888877777665431 011237889999999988754
No 114
>PLN02454 triacylglycerol lipase
Probab=89.94 E-value=0.89 Score=48.00 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 196 DKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 196 d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
...+.+++...++...+++|.++. .++|+|||.||-.+-..|..|...... ...+++..|..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 345778889999999998887643 699999999999999988888765321 124567788888877654
No 115
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.37 E-value=1.2 Score=43.75 Aligned_cols=96 Identities=25% Similarity=0.471 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCC----Ccc--ccccEEEEeCCCCcccccCCCCCCCccC
Q 011108 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNY----AWN--NVANVVFLESPAGVGFSYSSTKSDYELN 194 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~----sWn--~~anvLfiDqP~GvGfSy~~~~~~~~~~ 194 (493)
.++|+++|+-|-||-++. | +|.|- .|..|-- -|+ ...+ .+-|+-.=-+-+.+..+. .
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y---~~F~~--------~L~~~l~~r~~~wtIsh~~H---~~~P~sl~~~~s~~~~ei--f 89 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-Y---TEFAR--------HLHLNLIDRLPVWTISHAGH---ALMPASLREDHSHTNEEI--F 89 (301)
T ss_pred CCceEEEEecCCCCchhH-H---HHHHH--------HHHHhcccccceeEEecccc---ccCCcccccccccccccc--c
Confidence 779999999999999765 4 33321 1222211 222 1111 122311111111111122 3
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHH
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLA 238 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA 238 (493)
+.++..+.=.+|+.++.- +++++||.|||-|...+-++-
T Consensus 90 sL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGaYm~Lqil 128 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGAYMVLQIL 128 (301)
T ss_pred chhhHHHHHHHHHHHhCC-----CCCEEEEEecchhHHHHHHHh
Confidence 666677777788876653 578999999998876554433
No 116
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=89.32 E-value=7.4 Score=37.65 Aligned_cols=180 Identities=21% Similarity=0.157 Sum_probs=107.8
Q ss_pred EEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCC
Q 011108 171 VVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN 250 (493)
Q Consensus 171 vLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~ 250 (493)
.+-+| =.|-|-|-++= +|- +-...|+|+...+|-|-. ....=-.|.|||=||--+--.|.++.+- .
T Consensus 65 ~fRfD-F~GnGeS~gsf--~~G--n~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~-----~ 130 (269)
T KOG4667|consen 65 AFRFD-FSGNGESEGSF--YYG--NYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI-----R 130 (269)
T ss_pred EEEEE-ecCCCCcCCcc--ccC--cccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc-----h
Confidence 45566 57888775432 221 334467999887775543 2211246889999999999999998661 2
Q ss_pred ceeeeeeeEecCCccCcccccchhhhhhhhccCCChhhhhchhcccccccCCCChHHHHHHHHHHHhhcCCCccccCCCC
Q 011108 251 TVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAREGNDTKECETFLEKASDEIGDIDIYNIYAP 330 (493)
Q Consensus 251 ~~inLkGi~IGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Yni~~~ 330 (493)
..||+.|=-.+-..|....+ ..+.++.-..|.|+-...+
T Consensus 131 ~viNcsGRydl~~~I~eRlg-~~~l~~ike~Gfid~~~rk---------------------------------------- 169 (269)
T KOG4667|consen 131 NVINCSGRYDLKNGINERLG-EDYLERIKEQGFIDVGPRK---------------------------------------- 169 (269)
T ss_pred heEEcccccchhcchhhhhc-ccHHHHHHhCCceecCccc----------------------------------------
Confidence 35676665444433322211 2233333333332211100
Q ss_pred cCCCCCcCCCCCCCCCCCC-CCchhHHHHHhChHHHHHHhccCCCCCcccCccccCCCCCCCcHHHHHHhhhcCceEEEE
Q 011108 331 ICINPAFQNGSIGSVHNYD-PCTDYYVEAYLNTREVQTVLHVKPTNWTACSNLFNWTDSPSTVLPTIKNLIASGIRVWIY 409 (493)
Q Consensus 331 ~C~~~~~~~~~~~~~~~~d-pc~~~~~~~ylN~~~Vq~ALhv~~~~w~~cs~v~~~~d~~~s~~~~l~~Ll~~~irVliy 409 (493)
..+. -.+..-+...||-.-+++-+.++ ...|||-.
T Consensus 170 ---------------G~y~~rvt~eSlmdrLntd~h~aclkId-----------------------------~~C~VLTv 205 (269)
T KOG4667|consen 170 ---------------GKYGYRVTEESLMDRLNTDIHEACLKID-----------------------------KQCRVLTV 205 (269)
T ss_pred ---------------CCcCceecHHHHHHHHhchhhhhhcCcC-----------------------------ccCceEEE
Confidence 0000 01122345566655555545444 37999999
Q ss_pred ecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccCh
Q 011108 410 SGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQP 473 (493)
Q Consensus 410 sGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP 473 (493)
+|-.|-|||...+..+.+.+. |=.+-.|.||-|.--.+|-
T Consensus 206 hGs~D~IVPve~AkefAk~i~------------------------nH~L~iIEgADHnyt~~q~ 245 (269)
T KOG4667|consen 206 HGSEDEIVPVEDAKEFAKIIP------------------------NHKLEIIEGADHNYTGHQS 245 (269)
T ss_pred eccCCceeechhHHHHHHhcc------------------------CCceEEecCCCcCccchhh
Confidence 999999999999999998876 3367889999998766653
No 117
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=87.97 E-value=0.82 Score=43.15 Aligned_cols=44 Identities=20% Similarity=0.239 Sum_probs=34.5
Q ss_pred CCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccc
Q 011108 216 QYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSM 272 (493)
Q Consensus 216 ~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~ 272 (493)
++....+.|.|.|.||.|+-.+|.+. +++. ++.||.+.|.....
T Consensus 55 ~~~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 55 ELKPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred hCCCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHHH
Confidence 44555699999999999999999765 2555 67799999877543
No 118
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=87.83 E-value=2.2 Score=48.83 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccc-cCC--------CCC--C
Q 011108 122 TNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFS-YSS--------TKS--D 190 (493)
Q Consensus 122 ~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfS-y~~--------~~~--~ 190 (493)
..|+|+++||=.|.... +-.+.+ .|.. +-..++-+| ..|.|-| ... ..+ .
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~-----------~La~------~Gy~VIaiD-lpGHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAG-----------TLAA------AGVATIAID-HPLHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHH-----------HHHh------CCcEEEEeC-CCCCCccccccccccccccccCccc
Confidence 35899999996666554 322221 1110 124577778 4677777 321 011 1
Q ss_pred Ccc--------CChHHHHHHHHHHHHHHH------HH---CCCCCCCCEEEEeccccccchHHHHHH
Q 011108 191 YEL--------NGDKLTAQDSYTFLVNWL------ER---FPQYKKRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 191 ~~~--------~~d~~~A~d~~~fL~~f~------~~---fP~y~~~~fyI~GESYgG~YvP~lA~~ 240 (493)
|.+ .+-++.+.|+.......- ++ +..+...++++.|||.||..+..++..
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 210 156788889887544332 11 334667899999999999999988843
No 119
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=86.78 E-value=1.5 Score=39.44 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
.+++++...+++...++| ..+++|+|||.||..+-.+|..+..+.. ....+-+..|.|-+
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 344555555555555545 4579999999999999999988866521 12244555555443
No 120
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.91 E-value=1.8 Score=41.70 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 200 A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
.+++...+...++++| ..+++++|||.||-.+..+|..+.++. ...+++.+..|.|-+.
T Consensus 111 ~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 111 YNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 3344455555555544 557999999999999988888876653 2455888888887764
No 121
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=85.65 E-value=4.9 Score=48.72 Aligned_cols=102 Identities=11% Similarity=0.154 Sum_probs=66.1
Q ss_pred CCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHH
Q 011108 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (493)
Q Consensus 123 ~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (493)
.|-++.++|++|.+.. |..+.+. ......++-+|.| |.|-+. ... .+.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~------------------l~~~~~v~~~~~~-g~~~~~---~~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRY------------------LDPQWSIYGIQSP-RPDGPM---QTA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHh------------------cCCCCcEEEEECC-CCCCCC---CCC---CCHHHHHHH
Confidence 4668899998887665 5444421 1234677888874 565431 111 266778888
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCC
Q 011108 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (493)
Q Consensus 203 ~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 263 (493)
..+.++. .. ...++++.|+|+||..+-.+|.++.++. ..+..+++.++
T Consensus 1122 ~~~~i~~---~~---~~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~ 1169 (1296)
T PRK10252 1122 HLATLLE---QQ---PHGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDT 1169 (1296)
T ss_pred HHHHHHh---hC---CCCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecC
Confidence 7776663 11 2358999999999999999998876542 33556655554
No 122
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=84.05 E-value=1.8 Score=45.45 Aligned_cols=68 Identities=25% Similarity=0.309 Sum_probs=44.5
Q ss_pred cccEEEEe-------CCCCcccccCCCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHH
Q 011108 168 VANVVFLE-------SPAGVGFSYSSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAY 239 (493)
Q Consensus 168 ~anvLfiD-------qP~GvGfSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~ 239 (493)
.|-|+|+| +|.|.- ||.+.. -.|. +.+|+-.|.-+ |..++++-+.=+..++..+|-||||+...-+-.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRl 186 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRL 186 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHHHHHh
Confidence 57788988 455555 443322 2343 67777777766 555676654445679999999999965544433
No 123
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=83.54 E-value=0.32 Score=50.16 Aligned_cols=105 Identities=14% Similarity=0.239 Sum_probs=58.8
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCcc-ccccEEEEeCCCCcccccCCCCCCCccCChHH
Q 011108 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANVVFLESPAGVGFSYSSTKSDYELNGDKL 198 (493)
Q Consensus 120 ~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn-~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~ 198 (493)
..++|+++.+||=-+..+.. ..+. .+..+-+... ...|||.||--.|..-.|... ..+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHH
Confidence 36789999999833222110 0111 1222222222 478999999755554444321 124556
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHH
Q 011108 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (493)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~ 243 (493)
+++.+-.||......+ .+...+++|.|+|.|+|.+-..+.++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 7777777777666443 4556789999999999999888887755
No 124
>PLN02571 triacylglycerol lipase
Probab=83.22 E-value=3.2 Score=43.97 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC----CCCceeeeeeeEecCCccCc
Q 011108 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN----TKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~----~~~~~inLkGi~IGNg~id~ 267 (493)
.+.++++..|+.+++++|.. ..+++|+|||.||-.+-..|..|....-. ..+..+++..+..|.|-+..
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 45678888888888888765 34799999999999998888888653211 01224567778888777653
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=83.15 E-value=0.93 Score=43.29 Aligned_cols=73 Identities=16% Similarity=0.120 Sum_probs=53.0
Q ss_pred CCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeee
Q 011108 178 AGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKG 257 (493)
Q Consensus 178 ~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkG 257 (493)
+-|||-+++..- +.+++..|+..+++--++.||.-+ .+-+.|||-|.|.+.+...++ +++ .+.|
T Consensus 101 asvgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~--r~p-------rI~g 164 (270)
T KOG4627|consen 101 ASVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQ--RSP-------RIWG 164 (270)
T ss_pred EEeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHh--cCc-------hHHH
Confidence 446777766432 778999999999987788887655 499999999999888877774 222 2667
Q ss_pred eEecCCccC
Q 011108 258 IAIGNALID 266 (493)
Q Consensus 258 i~IGNg~id 266 (493)
+++-.|+-+
T Consensus 165 l~l~~GvY~ 173 (270)
T KOG4627|consen 165 LILLCGVYD 173 (270)
T ss_pred HHHHhhHhh
Confidence 777666543
No 126
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=82.98 E-value=2.1 Score=45.95 Aligned_cols=41 Identities=15% Similarity=0.003 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHH
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~ 240 (493)
++..+++.+.+...+++ +..+++.|.|||+||-++-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~---~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKA---SGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHH---cCCCCEEEEEECHhHHHHHHHHHH
Confidence 44667777777777775 456799999999999888777654
No 127
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=82.33 E-value=2.7 Score=44.16 Aligned_cols=60 Identities=20% Similarity=0.228 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCC-CCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 198 LTAQDSYTFLVNWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~y~~-~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
..|-|...+|..-.++||..+. .|....|.|||| |...|+.+| .|-.+.||+=-.++.-|
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~---------aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKI---------APWLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhh---------CccceeEEEecCccccc
Confidence 4799999999999999999986 788889999988 455666666 24456666555555544
No 128
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=82.10 E-value=9.3 Score=30.61 Aligned_cols=79 Identities=19% Similarity=0.173 Sum_probs=52.0
Q ss_pred CceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccC
Q 011108 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (493)
Q Consensus 106 ~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~ 185 (493)
|..||+..+..++. .+.+|+.++|--..|.. |..|.+ .|.. +-.+|+-+|+ .|.|.|-.
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~~------~G~~V~~~D~-rGhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE-----------FLAE------QGYAVFAYDH-RGHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH-----------HHHh------CCCEEEEECC-CcCCCCCC
Confidence 35688877776532 78999999987444444 544442 2222 2457889995 99999975
Q ss_pred CCCCCCccCChHHHHHHHHHHHH
Q 011108 186 STKSDYELNGDKLTAQDSYTFLV 208 (493)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~ 208 (493)
... +. .+-++..+|+..|++
T Consensus 60 ~rg--~~-~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 60 KRG--HI-DSFDDYVDDLHQFIQ 79 (79)
T ss_pred ccc--cc-CCHHHHHHHHHHHhC
Confidence 432 22 266788888887763
No 129
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=81.58 E-value=14 Score=39.23 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHH-CCCCC-CCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 200 AQDSYTFLVNWLER-FPQYK-KRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 200 A~d~~~fL~~f~~~-fP~y~-~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
.+.+.+=|.-|.++ |+-.. ..+..|+|.||||.-+-++|.+- +-.+.+++...|.+
T Consensus 266 ~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~----------Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 266 WLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHW----------PERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhC----------cccccEEEEeccce
Confidence 33333444445543 43222 24589999999999887777553 33367777766643
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=80.85 E-value=4.1 Score=41.90 Aligned_cols=61 Identities=25% Similarity=0.249 Sum_probs=43.3
Q ss_pred ccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCC-CCCCCCEEEEeccccccchHH
Q 011108 167 NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFP-QYKKRDFYIAGESYAGHYVPQ 236 (493)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP-~y~~~~fyI~GESYgG~YvP~ 236 (493)
..+|||..- .+|||+|-+.. +-++.+.|- +++.++++..+ .-+.+.+.+-|+|-||-....
T Consensus 170 ~~aNvl~fN-YpGVg~S~G~~-------s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFN-YPGVGSSTGPP-------SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEEC-CCccccCCCCC-------CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 468999999 79999996543 334455554 44666665533 356789999999999986554
No 131
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=80.35 E-value=13 Score=35.90 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHC--CCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeee-EecCCccCccc
Q 011108 198 LTAQDSYTFLVNWLERF--PQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGI-AIGNALIDGPT 269 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~f--P~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi-~IGNg~id~~~ 269 (493)
+.++.+-+.++..++.. ..-..+++.|.|||+||.-+-.+.. ..... .-++++| .+|.|...+..
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~-~~~~~------~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALS-LPNYD------PDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHh-ccccc------cccEEEEEEEcCCCCCccc
Confidence 44555555555555543 2335678999999999974433332 11111 2234444 46666665543
No 132
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=80.03 E-value=25 Score=36.11 Aligned_cols=122 Identities=24% Similarity=0.314 Sum_probs=69.6
Q ss_pred eEEEEEEeCCCCCCCCCEEEEEcCCCChhh--hhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccC
Q 011108 108 SLFYYFAESPQNSSTNPLLLWLNGGPGCSS--LGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (493)
Q Consensus 108 ~lFy~f~es~~~~~~~PlvlWLnGGPGcSS--l~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~ 185 (493)
-.+.|... + ....+|+||-+||==|.|. ..-|++.+ +.+. -..++-.+ -.|.|.+-.
T Consensus 62 ~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~------------~~~r------g~~~Vv~~-~Rgcs~~~n 120 (345)
T COG0429 62 IDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMRA------------LSRR------GWLVVVFH-FRGCSGEAN 120 (345)
T ss_pred EEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHHH------------HHhc------CCeEEEEe-cccccCCcc
Confidence 34555442 2 2245699999999555443 21222221 2221 14566667 488887754
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
....-| +.++. +|+..||..-.++|| .++||.+|-|.||. +||..+-+.-+. .....++++-+|+
T Consensus 121 ~~p~~y-h~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d----~~~~aa~~vs~P~ 185 (345)
T COG0429 121 TSPRLY-HSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD----LPLDAAVAVSAPF 185 (345)
T ss_pred cCccee-cccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC----cccceeeeeeCHH
Confidence 333333 22433 677666654445554 48999999999995 456666555322 2336677776665
No 133
>PRK04940 hypothetical protein; Provisional
Probab=79.43 E-value=2.5 Score=39.60 Aligned_cols=40 Identities=13% Similarity=0.193 Sum_probs=32.2
Q ss_pred CCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccc
Q 011108 220 RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSM 272 (493)
Q Consensus 220 ~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~ 272 (493)
+++.|+|.|-||.|+..||.+. .++.+ +.||.+.|.....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~aV-LiNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQV-IFNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCEE-EECCCCChHHHHH
Confidence 4789999999999999999875 25555 6799999976433
No 134
>PLN02753 triacylglycerol lipase
Probab=79.23 E-value=4.9 Score=43.68 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHHHHHHHHHCCC--CCCCCEEEEeccccccchHHHHHHHHHccc--CCCCceeeeeeeEecCCccC
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQ--YKKRDFYIAGESYAGHYVPQLAYTILLNNK--NTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~--y~~~~fyI~GESYgG~YvP~lA~~I~~~n~--~~~~~~inLkGi~IGNg~id 266 (493)
+...+.+++...++..++.+|. .....++|+|||.||-.+-..|..|..... ......+++.-+..|.|-+.
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 4456788889999999988763 235689999999999999999888865321 11122455667777766554
No 135
>PLN02719 triacylglycerol lipase
Probab=77.66 E-value=5.5 Score=43.18 Aligned_cols=71 Identities=18% Similarity=0.242 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC--CCCEEEEeccccccchHHHHHHHHHcccC--CCCceeeeeeeEecCCccCc
Q 011108 197 KLTAQDSYTFLVNWLERFPQYK--KRDFYIAGESYAGHYVPQLAYTILLNNKN--TKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~--~~~fyI~GESYgG~YvP~lA~~I~~~n~~--~~~~~inLkGi~IGNg~id~ 267 (493)
..+.+++...|+..++.+|.+. ...++|+|||.||-.+-..|..|.+..-. .....+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 4567788888999999888753 35799999999999999999888764211 11123456667777665543
No 136
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=76.80 E-value=3.5 Score=39.55 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceee-eeeeEecCCccC
Q 011108 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN-LKGIAIGNALID 266 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~in-LkGi~IGNg~id 266 (493)
-.-.|+..+...|++.++ ++|||+|+|||=|+..+-.|-+...+.+.. .-. +..++||-+++.
T Consensus 75 ~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~~~pl----~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIAGDPL----RKRLVAAYLIGYPVTV 138 (207)
T ss_pred hhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhcCchH----HhhhheeeecCccccH
Confidence 345688889999999864 479999999999999887776655443321 111 455666655443
No 137
>COG0627 Predicted esterase [General function prediction only]
Probab=76.07 E-value=8.4 Score=39.45 Aligned_cols=130 Identities=21% Similarity=0.219 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCc--cccC-CCCccccccEEEEeCCCCcccccCCCCCCCccCChHH
Q 011108 122 TNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKT--LFRN-NYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKL 198 (493)
Q Consensus 122 ~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~--l~~N-~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~ 198 (493)
.+.-|+|+.+|..|..- ++.+.++++-..+... +.-+ -.-+....++--|+ |+|.|.|+-.+...-+. ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc-ccC-
Confidence 34445555566888741 2334444443222211 1111 22344555566667 69999998443221100 111
Q ss_pred HHHHHHHHHH-----HHHHHCCCCCC-CCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 199 TAQDSYTFLV-----NWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 199 ~A~d~~~fL~-----~f~~~fP~y~~-~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.-+.+.||. .|.+.||--++ ..-.|+|+|+||+=+-.+|.+-.++ ++.+.=-.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR----------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch----------hceecccccccccc
Confidence 234444443 56667774432 2568999999999888888654322 55555556666655
No 138
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=74.06 E-value=4 Score=39.15 Aligned_cols=47 Identities=17% Similarity=0.267 Sum_probs=36.2
Q ss_pred HHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 207 LVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 207 L~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
-.+|++..|+...+++-|.|-|.||-++-.+|.+.. .++.++..+|.
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-----------~i~avVa~~ps 55 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-----------QISAVVAISPS 55 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-----------SEEEEEEES--
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-----------CccEEEEeCCc
Confidence 456888999999999999999999999999998762 47777776654
No 139
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=73.74 E-value=18 Score=32.91 Aligned_cols=77 Identities=14% Similarity=0.140 Sum_probs=47.7
Q ss_pred ccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHccc
Q 011108 167 NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNK 246 (493)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~ 246 (493)
...+++.+|. .|.|.+-... .+.+..+++....+. ... ...+++++|+|+||..+-.+|.++..+.
T Consensus 24 ~~~~v~~~~~-~g~~~~~~~~------~~~~~~~~~~~~~l~---~~~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~~- 89 (212)
T smart00824 24 GRRDVSALPL-PGFGPGEPLP------ASADALVEAQAEAVL---RAA---GGRPFVLVGHSSGGLLAHAVAARLEARG- 89 (212)
T ss_pred CCccEEEecC-CCCCCCCCCC------CCHHHHHHHHHHHHH---Hhc---CCCCeEEEEECHHHHHHHHHHHHHHhCC-
Confidence 3467888884 5666542211 144445555444443 222 3468999999999999999998876542
Q ss_pred CCCCceeeeeeeEecCC
Q 011108 247 NTKNTVINLKGIAIGNA 263 (493)
Q Consensus 247 ~~~~~~inLkGi~IGNg 263 (493)
..++++++.+.
T Consensus 90 ------~~~~~l~~~~~ 100 (212)
T smart00824 90 ------IPPAAVVLLDT 100 (212)
T ss_pred ------CCCcEEEEEcc
Confidence 23566655543
No 140
>PF03283 PAE: Pectinacetylesterase
Probab=73.06 E-value=24 Score=36.90 Aligned_cols=147 Identities=20% Similarity=0.208 Sum_probs=76.1
Q ss_pred EEEEEeCCCCCCCCCEEEEEcCCCChhhhhh---hhhhhcCCeE-----EcCCCC---ccccCCCCccccccEEEEeCCC
Q 011108 110 FYYFAESPQNSSTNPLLLWLNGGPGCSSLGY---GAMSELGPFR-----VNKDGK---TLFRNNYAWNNVANVVFLESPA 178 (493)
Q Consensus 110 Fy~f~es~~~~~~~PlvlWLnGGPGcSSl~~---G~f~E~GP~~-----v~~~~~---~l~~N~~sWn~~anvLfiDqP~ 178 (493)
.|++-++. ...++-+||.|.||-.|.+..- -...++|-.. +..+|- .-..||.=+ ..|++||= =
T Consensus 38 ~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~vp--Y 112 (361)
T PF03283_consen 38 GYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFVP--Y 112 (361)
T ss_pred cEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEEE--e
Confidence 36666652 3456799999999989987420 1122334221 111220 122354222 26778884 4
Q ss_pred CcccccCCCCC--CCccCChHHHHHHHHHHHHHHH-HH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceee
Q 011108 179 GVGFSYSSTKS--DYELNGDKLTAQDSYTFLVNWL-ER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (493)
Q Consensus 179 GvGfSy~~~~~--~~~~~~d~~~A~d~~~fL~~f~-~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~in 254 (493)
=+|-+++-+.. .+...+..-....+++.+.+++ +. +++ ..++.|+|.|-||.=+..-+.++.+.-.. ...
T Consensus 113 C~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~----~~~ 186 (361)
T PF03283_consen 113 CDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS----SVK 186 (361)
T ss_pred cCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc----Cce
Confidence 44444432211 1110011112333444444444 44 433 35799999999998887777777665321 345
Q ss_pred eeeeEecCCccCc
Q 011108 255 LKGIAIGNALIDG 267 (493)
Q Consensus 255 LkGi~IGNg~id~ 267 (493)
++++.=..-++|.
T Consensus 187 v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 187 VKCLSDSGFFLDN 199 (361)
T ss_pred EEEeccccccccc
Confidence 6666555445544
No 141
>PLN02761 lipase class 3 family protein
Probab=72.96 E-value=9.9 Score=41.35 Aligned_cols=70 Identities=14% Similarity=0.115 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-CC--CCEEEEeccccccchHHHHHHHHHcccC---CCCceeeeeeeEecCCccC
Q 011108 197 KLTAQDSYTFLVNWLERFPQY-KK--RDFYIAGESYAGHYVPQLAYTILLNNKN---TKNTVINLKGIAIGNALID 266 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y-~~--~~fyI~GESYgG~YvP~lA~~I~~~n~~---~~~~~inLkGi~IGNg~id 266 (493)
..+.+++...++...+.+|.. ++ -.++|+|||.||-.+-..|..|...+-. .....+++.-+..|.|=+.
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 456778888899888887643 22 3599999999999999888888654321 0123456667777766554
No 142
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=71.70 E-value=72 Score=32.21 Aligned_cols=90 Identities=16% Similarity=0.072 Sum_probs=54.1
Q ss_pred HHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccce--eCCccccEEEEe---cCeEEEEEcCCCcc
Q 011108 393 LPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWY--TNDEVGGYVEAY---QGLTLVTVRGAGHL 467 (493)
Q Consensus 393 ~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~--~~~~v~Gy~~~y---~~Ltf~tV~gAGH~ 467 (493)
++.|+.|-+..+||++.-|-.|.++--.-.+...... .+.+.+.--. .+++.---.+++ ..-.-|.|..-||+
T Consensus 202 ~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf 279 (297)
T PF06342_consen 202 KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHF 279 (297)
T ss_pred HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChH
Confidence 4667777777899999999999988766666665543 2211111000 000100001111 12345788999999
Q ss_pred CcccChHHHHHHHHHHH
Q 011108 468 VPSDQPERALTLISSFL 484 (493)
Q Consensus 468 vP~dqP~~al~l~~~fl 484 (493)
..-.||+-.-+.+.+.+
T Consensus 280 ~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 280 QQKFRADLIAEAIKKMF 296 (297)
T ss_pred HhHHHHHHHHHHHHHhh
Confidence 99999988777777654
No 143
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=71.67 E-value=7.2 Score=36.92 Aligned_cols=63 Identities=11% Similarity=0.175 Sum_probs=50.5
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
+-+++|.|+-..++.+.++ .+.+++.++|-|+|.-.+|.+..++...- +-.++++.+-.+-..
T Consensus 46 tP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~------r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAAL------RARVAQVVLLSPSTT 108 (192)
T ss_pred CHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHH------HhheeEEEEeccCCc
Confidence 7789999999988888876 57889999999999999999998886553 334777776655433
No 144
>KOG3101 consensus Esterase D [General function prediction only]
Probab=70.13 E-value=49 Score=32.07 Aligned_cols=128 Identities=19% Similarity=0.227 Sum_probs=62.1
Q ss_pred ceeEEEEEEecC----CCCceEEEEEEeCCCCCCC--CCEEEEEcCCCChhhhhhhhhh----------hcCCeEEcCCC
Q 011108 92 FDQYAGYVTVDP----KTGRSLFYYFAESPQNSST--NPLLLWLNGGPGCSSLGYGAMS----------ELGPFRVNKDG 155 (493)
Q Consensus 92 ~~~ysGyv~v~~----~~~~~lFy~f~es~~~~~~--~PlvlWLnGGPGcSSl~~G~f~----------E~GP~~v~~~~ 155 (493)
.+.+-|+..|-. +.+-.|=|-.+-.+..|+. -|+|.||.| --|.- -+|. +.|=-.|.+|.
T Consensus 7 nk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSG-LTCT~---~Nfi~Ksg~qq~As~hgl~vV~PDT 82 (283)
T KOG3101|consen 7 NKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSG-LTCTH---ENFIEKSGFQQQASKHGLAVVAPDT 82 (283)
T ss_pred cccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecC-Ccccc---hhhHhhhhHHHhHhhcCeEEECCCC
Confidence 455666666642 2233565654444444444 499999986 35542 2232 34555566653
Q ss_pred C----ccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHH-HCCCCCCCCEEEEecccc
Q 011108 156 K----TLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLE-RFPQYKKRDFYIAGESYA 230 (493)
Q Consensus 156 ~----~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~-~fP~y~~~~fyI~GESYg 230 (493)
. .+.-.+-|| |=-.|.|| |.+.+.+-. ...-+.-+.+.+=|-+-+. .+-.+-..+.-|+|||+|
T Consensus 83 SPRG~~v~g~~esw---------DFG~GAGF-YvnAt~epw-~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMG 151 (283)
T KOG3101|consen 83 SPRGVEVAGDDESW---------DFGQGAGF-YVNATQEPW-AKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMG 151 (283)
T ss_pred CCCccccCCCcccc---------cccCCcee-EEecccchH-hhhhhHHHHHHHHHHHHhccccccccchhcceeccccC
Confidence 1 122223344 43456666 333332211 1212222222222222222 222333446899999999
Q ss_pred ccch
Q 011108 231 GHYV 234 (493)
Q Consensus 231 G~Yv 234 (493)
||=+
T Consensus 152 GhGA 155 (283)
T KOG3101|consen 152 GHGA 155 (283)
T ss_pred CCce
Confidence 9944
No 145
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=69.65 E-value=7 Score=37.95 Aligned_cols=39 Identities=18% Similarity=0.356 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHH
Q 011108 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (493)
Q Consensus 201 ~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~ 243 (493)
+...++|.+..+.+|+ +++|+|||=||..+-+.|..+.+
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 4555677777776654 59999999999999888887544
No 146
>PLN02408 phospholipase A1
Probab=69.44 E-value=11 Score=39.20 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
...+++.+-+++.++.+|.. ...++|+|||.||-.+-..|..|...-.. ...+.-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCcc
Confidence 45667778888888888764 24699999999999999888888654211 113445556655544
No 147
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=69.30 E-value=13 Score=35.78 Aligned_cols=58 Identities=19% Similarity=0.095 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 200 AQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 200 A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.+.+.+=|..|+++ |+-...+ .+|+|.|+||.-+-.+|.+- +--+.+++.-.|.+++.
T Consensus 95 ~~~l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~----------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 95 ETFLTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRH----------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHS----------TTTESEEEEESEESETT
T ss_pred ceehhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhC----------ccccccccccCcccccc
Confidence 33344445555553 5444444 89999999999888888664 33488888888887766
No 148
>PRK14566 triosephosphate isomerase; Provisional
Probab=68.52 E-value=13 Score=36.95 Aligned_cols=61 Identities=21% Similarity=0.353 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.+.|+++..|+++++...-+.....+=|. |||---|.-+..|.... ++.|++||.+-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 45689999999999976411112233444 99999999999997754 499999999998874
No 149
>PLN02802 triacylglycerol lipase
Probab=67.99 E-value=12 Score=40.68 Aligned_cols=64 Identities=8% Similarity=0.069 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
.+.+++..-++.+++.+|.. ...++|+|||.||-.+-..|..|...... .+.+..+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 45667777788888876542 24699999999999999888888655321 234556666665544
No 150
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=67.75 E-value=12 Score=36.25 Aligned_cols=62 Identities=27% Similarity=0.377 Sum_probs=49.1
Q ss_pred ceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChH---HHHHHH
Q 011108 404 IRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPE---RALTLI 480 (493)
Q Consensus 404 irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~---~al~l~ 480 (493)
.++++.+|..|.+||....+...+...- .......+.+++|....+.+. .++.-+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~----------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 290 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE----------------------RPKKLLFVPGGGHIDLYDNPPAVEQALDKL 290 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc----------------------CCceEEEecCCccccccCccHHHHHHHHHH
Confidence 8999999999999999888887776541 135788999999999986655 677777
Q ss_pred HHHHcCC
Q 011108 481 SSFLHGI 487 (493)
Q Consensus 481 ~~fl~g~ 487 (493)
..|+...
T Consensus 291 ~~f~~~~ 297 (299)
T COG1073 291 AEFLERH 297 (299)
T ss_pred HHHHHHh
Confidence 7777543
No 151
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=67.63 E-value=15 Score=35.50 Aligned_cols=59 Identities=27% Similarity=0.415 Sum_probs=45.4
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccCh--HHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQP--ERALTLI 480 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP--~~al~l~ 480 (493)
.+|-|-+-|+.|.++|..-++..++.-. + ..+...-.||+||.-.| +.+...|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------------~-a~vl~HpggH~VP~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------------D-ATVLEHPGGHIVPNKAKYKEKIADFI 217 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------------C-CeEEecCCCccCCCchHHHHHHHHHH
Confidence 5889999999999999998888777643 2 15788999999998765 4566666
Q ss_pred HHHHcC
Q 011108 481 SSFLHG 486 (493)
Q Consensus 481 ~~fl~g 486 (493)
+.++..
T Consensus 218 ~~~~~~ 223 (230)
T KOG2551|consen 218 QSFLQE 223 (230)
T ss_pred HHHHHh
Confidence 666543
No 152
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=67.36 E-value=36 Score=35.62 Aligned_cols=136 Identities=21% Similarity=0.393 Sum_probs=84.4
Q ss_pred CCceEEEEEEeCCCC---CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcc
Q 011108 105 TGRSLFYYFAESPQN---SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVG 181 (493)
Q Consensus 105 ~~~~lFy~f~es~~~---~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvG 181 (493)
.|-.++|.-+..... ..-.|| |.+||=||.= =-|..+=|..-++.... ..+.| .++|| .=|-+|-|
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~Pl-Ll~HGwPGsv----~EFykfIPlLT~p~~hg-~~~d~----~FEVI-~PSlPGyg 200 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPL-LLLHGWPGSV----REFYKFIPLLTDPKRHG-NESDY----AFEVI-APSLPGYG 200 (469)
T ss_pred cceeEEEEEecCCccccCCcccce-EEecCCCchH----HHHHhhhhhhcCccccC-Cccce----eEEEe-ccCCCCcc
Confidence 466788887754422 233455 5689999862 33444446544432100 00111 23443 34578999
Q ss_pred cccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEec
Q 011108 182 FSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIG 261 (493)
Q Consensus 182 fSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IG 261 (493)
||-..+..++ +..++|.=+...+. .+.-++|||=|--||.....-+|+.. +-|+.|+=+-
T Consensus 201 wSd~~sk~GF---n~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLy----------PenV~GlHln 260 (469)
T KOG2565|consen 201 WSDAPSKTGF---NAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLY----------PENVLGLHLN 260 (469)
T ss_pred cCcCCccCCc---cHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhc----------chhhhHhhhc
Confidence 9887665554 66777776665444 35667999999889988888888776 5567777777
Q ss_pred CCccCccccc
Q 011108 262 NALIDGPTRS 271 (493)
Q Consensus 262 Ng~id~~~~~ 271 (493)
+....+....
T Consensus 261 m~~~~s~~s~ 270 (469)
T KOG2565|consen 261 MCFVNSPFST 270 (469)
T ss_pred ccccCCcHHH
Confidence 7766665543
No 153
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=66.14 E-value=14 Score=36.28 Aligned_cols=66 Identities=21% Similarity=0.209 Sum_probs=41.6
Q ss_pred cccEEEEeCCCCcccccCCCCCCCccCChHHHH-HHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHH
Q 011108 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTA-QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLA 238 (493)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A-~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA 238 (493)
=+.||-.| =.|+|-|.....+.... .-.+-| .|+-..|. ++++ .....+.|..||||||+..=-++
T Consensus 57 Gf~Vlt~d-yRG~g~S~p~~~~~~~~-~~~DwA~~D~~aal~-~~~~--~~~~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 57 GFEVLTFD-YRGIGQSRPASLSGSQW-RYLDWARLDFPAALA-ALKK--ALPGHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred CceEEEEe-cccccCCCccccccCcc-chhhhhhcchHHHHH-HHHh--hCCCCceEEeeccccceeecccc
Confidence 46788899 59999998655443222 223333 35554444 3433 23457999999999999665444
No 154
>PLN02324 triacylglycerol lipase
Probab=65.57 E-value=18 Score=38.43 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCC-----CCceeeeeeeEecCCccCc
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNT-----KNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~-----~~~~inLkGi~IGNg~id~ 267 (493)
..+-+++..-|+..++.+|... ..++|+|||.||-.+...|..|....... ....+++.-+..|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 4466677788888888876532 36999999999999988888886642110 1124556666666665543
No 155
>PRK14567 triosephosphate isomerase; Provisional
Probab=64.70 E-value=19 Score=35.70 Aligned_cols=61 Identities=21% Similarity=0.294 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.+.++++..|+++++..+-+-....+=|. |||-.-|.=+..|++.. ++.|++||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 45789999999999976521112233343 99999999999997753 489999999998764
No 156
>PLN02847 triacylglycerol lipase
Probab=64.03 E-value=14 Score=40.86 Aligned_cols=63 Identities=19% Similarity=0.303 Sum_probs=39.9
Q ss_pred ccCChHHHHHHHHHH----HHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecC
Q 011108 192 ELNGDKLTAQDSYTF----LVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGN 262 (493)
Q Consensus 192 ~~~~d~~~A~d~~~f----L~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGN 262 (493)
.+.+.-..|..++.. |++-++.+|.| ++.|+|||.||-.+.-++..+ ..++. .-+++.+..|.
T Consensus 222 AH~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilL-Re~~~----fssi~CyAFgP 288 (633)
T PLN02847 222 AHCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYIL-REQKE----FSSTTCVTFAP 288 (633)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHH-hcCCC----CCCceEEEecC
Confidence 344666666665554 44455567766 689999999999887776554 43322 33456666664
No 157
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=62.48 E-value=16 Score=37.81 Aligned_cols=56 Identities=20% Similarity=0.326 Sum_probs=39.3
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 205 TFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 205 ~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
+-++.-.+.+| +..++|+|||-||-++...|..|...... ...+++-+--|-|-+.
T Consensus 159 ~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 159 AELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCcc
Confidence 33444455655 56899999999999999999999887542 2345666666655443
No 158
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=62.48 E-value=33 Score=32.40 Aligned_cols=48 Identities=23% Similarity=0.207 Sum_probs=32.6
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccC
Q 011108 401 ASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLV 468 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~v 468 (493)
+...||++..|..|..+|....+...+.|+=.+ ..+++.+++|++|--
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~y~ga~HgF 190 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAAG--------------------VDVEVHVYPGAGHGF 190 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTT--------------------TTEEEEEETT--TTT
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhcC--------------------CcEEEEECCCCcccc
Confidence 347999999999999999998888888874211 247889999999963
No 159
>PLN00413 triacylglycerol lipase
Probab=61.40 E-value=8.9 Score=41.26 Aligned_cols=39 Identities=15% Similarity=0.335 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHH
Q 011108 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (493)
Q Consensus 202 d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~ 243 (493)
++...|++.++.+|++ +++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5566677777777654 69999999999999888876643
No 160
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=61.12 E-value=34 Score=33.22 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=54.3
Q ss_pred cEEEEeCCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCC
Q 011108 170 NVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTK 249 (493)
Q Consensus 170 nvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~ 249 (493)
+...|+-|.+.+-=-+-..-.+. .+..+-++.+.+.+..+.. ..+++.|+|.|-|+.-+-..+.++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~-~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~-- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYD-ESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP-- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccc-hHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--
Confidence 45566667754331111111122 1555566666666665554 678999999999999888888888764321
Q ss_pred CceeeeeeeEecCCc
Q 011108 250 NTVINLKGIAIGNAL 264 (493)
Q Consensus 250 ~~~inLkGi~IGNg~ 264 (493)
..-++.-+++|||.
T Consensus 76 -~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 76 -PPDDLSFVLIGNPR 89 (225)
T ss_pred -CcCceEEEEecCCC
Confidence 12578999999975
No 161
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=60.51 E-value=9.7 Score=36.14 Aligned_cols=57 Identities=26% Similarity=0.315 Sum_probs=40.5
Q ss_pred CCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHH
Q 011108 177 PAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTI 241 (493)
Q Consensus 177 P~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I 241 (493)
=.|||-|-+.-.... ++.+.|....++|+ +++|+-+. +.++|-|+|+..+.++|.+.
T Consensus 68 fRgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~~--~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 68 FRGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSAS--CWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred ccccccccCcccCCc---chHHHHHHHHHHHH---hhCCCchh--hhhcccchHHHHHHHHHHhc
Confidence 589999987654443 55555555444444 46777553 79999999999888888776
No 162
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=60.43 E-value=14 Score=34.22 Aligned_cols=43 Identities=21% Similarity=0.342 Sum_probs=35.1
Q ss_pred ceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCccc
Q 011108 404 IRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSD 471 (493)
Q Consensus 404 irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~d 471 (493)
++.+++.++.|..||+.-++.+.+.++ ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCccccc
Confidence 555899999999999999999999876 3889999999997653
No 163
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=59.64 E-value=14 Score=35.40 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcc
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNN 245 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n 245 (493)
+.+..++.+.+.|.+..+..+.- .+++-+.|||.||.++-+....+.+.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 45567777777777777665332 468999999999999987766665554
No 164
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=58.21 E-value=53 Score=35.55 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=22.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccchHHH
Q 011108 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQL 237 (493)
Q Consensus 204 ~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~l 237 (493)
++++++..+.|=. -..++-|+|||-|++-+-.+
T Consensus 165 LkWV~~NIe~FGG-Dp~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGG-DPQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCC-CccceEEeeccchHHHHHHh
Confidence 4566666777622 23479999999998866544
No 165
>PRK07868 acyl-CoA synthetase; Validated
Probab=57.58 E-value=17 Score=43.13 Aligned_cols=61 Identities=16% Similarity=0.192 Sum_probs=48.2
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEE-EEEcCCCccCcc---cChHHHH
Q 011108 402 SGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTL-VTVRGAGHLVPS---DQPERAL 477 (493)
Q Consensus 402 ~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf-~tV~gAGH~vP~---dqP~~al 477 (493)
-..|||++.|..|.++|....+.+.+.+. +..+ ..+.++|||.++ .-|+...
T Consensus 296 i~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~w 351 (994)
T PRK07868 296 ITCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------NAEVYESLIRAGHFGLVVGSRAAQQTW 351 (994)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEEeCCCCCEeeeechhhhhhhC
Confidence 46899999999999999999998877654 3355 567999999654 4566777
Q ss_pred HHHHHHHcC
Q 011108 478 TLISSFLHG 486 (493)
Q Consensus 478 ~l~~~fl~g 486 (493)
-.+..||..
T Consensus 352 p~i~~wl~~ 360 (994)
T PRK07868 352 PTVADWVKW 360 (994)
T ss_pred hHHHHHHHH
Confidence 888888873
No 166
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=57.50 E-value=8.9 Score=36.74 Aligned_cols=48 Identities=23% Similarity=0.281 Sum_probs=29.1
Q ss_pred cCceEEEEecCCccccCchhH-HHHHHHCCCCCCCCcccceeCCccccEEEEec-CeEEEEEcCCCccC
Q 011108 402 SGIRVWIYSGDVDGIVPTTAS-RYSINALNLPVEIPWYPWYTNDEVGGYVEAYQ-GLTLVTVRGAGHLV 468 (493)
Q Consensus 402 ~~irVliysGd~D~ivp~~gt-~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~-~Ltf~tV~gAGH~v 468 (493)
.+-+||+++|..|.+.|..-. +..++.|+=.+. . .++.+..++|||++
T Consensus 114 i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~-------------------~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 114 IKGPILLISGEDDQIWPSSEMAEQIEERLKAAGF-------------------PHNVEHLSYPGAGHLI 163 (213)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------EEEEETTB-S--
T ss_pred cCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC-------------------CCcceEEEcCCCCcee
Confidence 379999999999999986654 455566663222 2 47889999999996
No 167
>PLN02310 triacylglycerol lipase
Probab=57.41 E-value=22 Score=37.64 Aligned_cols=63 Identities=11% Similarity=0.133 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHCCC-CCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 199 TAQDSYTFLVNWLERFPQ-YKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~-y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
+.+++.+-++...+.+++ -....+.|+|||.||-.+-..|..|.... ..+++.-+..|.|-+.
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 445666667776666553 22347999999999999988777765432 2345666777776654
No 168
>PLN02162 triacylglycerol lipase
Probab=57.15 E-value=14 Score=39.61 Aligned_cols=40 Identities=15% Similarity=0.251 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHc
Q 011108 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (493)
Q Consensus 202 d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~ 244 (493)
.+.+.|++.+.++|. .+++|+|||.||-.+-..|..+..+
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHHc
Confidence 344556666776665 4699999999999888777665443
No 169
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=57.10 E-value=52 Score=35.65 Aligned_cols=94 Identities=17% Similarity=0.081 Sum_probs=58.6
Q ss_pred ccEEEEeCCCCcccccCCC---CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcc
Q 011108 169 ANVVFLESPAGVGFSYSST---KSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNN 245 (493)
Q Consensus 169 anvLfiDqP~GvGfSy~~~---~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n 245 (493)
|-|+.||. +=-|-|.... +.++.--+.+|+-.|+.+|++.--.+|+.-.+.+++.+|-||.|-...-+-.+..+
T Consensus 119 A~v~~lEH-RFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe-- 195 (514)
T KOG2182|consen 119 ATVFQLEH-RFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE-- 195 (514)
T ss_pred CeeEEeee-eccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--
Confidence 67888884 4445443211 11122237788999999998888888866666699999999999766555444322
Q ss_pred cCCCCceeeeeeeEecCCccCcccccch
Q 011108 246 KNTKNTVINLKGIAIGNALIDGPTRSMG 273 (493)
Q Consensus 246 ~~~~~~~inLkGi~IGNg~id~~~~~~~ 273 (493)
-+-|-+--.+-+....+...
T Consensus 196 --------l~~GsvASSapv~A~~DF~E 215 (514)
T KOG2182|consen 196 --------LTVGSVASSAPVLAKVDFYE 215 (514)
T ss_pred --------hheeecccccceeEEecHHH
Confidence 24444444555555554433
No 170
>PLN03037 lipase class 3 family protein; Provisional
Probab=56.82 E-value=24 Score=38.46 Aligned_cols=46 Identities=15% Similarity=0.162 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHCCCC-CCCCEEEEeccccccchHHHHHHHHHcc
Q 011108 200 AQDSYTFLVNWLERFPQY-KKRDFYIAGESYAGHYVPQLAYTILLNN 245 (493)
Q Consensus 200 A~d~~~fL~~f~~~fP~y-~~~~fyI~GESYgG~YvP~lA~~I~~~n 245 (493)
-+++..-++..++.+|+. ....++|+|||.||-.+--.|..|....
T Consensus 297 reQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~ 343 (525)
T PLN03037 297 SEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSV 343 (525)
T ss_pred HHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhC
Confidence 355666677777776643 3457999999999999988887776543
No 171
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=56.33 E-value=9.9 Score=36.25 Aligned_cols=49 Identities=22% Similarity=0.324 Sum_probs=32.3
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPER 475 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~ 475 (493)
.+|+|.+.|..|.+++...++...+.-. .. .-+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~-----------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD-----------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH-----------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc-----------------------CC-cEEEEECCCCcCcCChhhc
Confidence 6999999999999999888877776533 12 5678889999999987653
No 172
>PLN02934 triacylglycerol lipase
Probab=54.08 E-value=29 Score=37.72 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHc
Q 011108 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (493)
Q Consensus 202 d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~ 244 (493)
.+...|+++++.+|.+ +++|+|||.||-.+-..|..+..+
T Consensus 306 ~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHh
Confidence 4566677778877664 699999999999988887666543
No 173
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=53.47 E-value=64 Score=32.13 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=28.2
Q ss_pred CEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 221 DFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 221 ~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
++.|+|||=||+-+-.+|....+ ....+++++++..+|+=
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~-----~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNAS-----SSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcc-----cccccceeEEEEecccc
Confidence 69999999999955444433211 12357899999988875
No 174
>PRK07868 acyl-CoA synthetase; Validated
Probab=52.65 E-value=27 Score=41.44 Aligned_cols=22 Identities=32% Similarity=0.321 Sum_probs=18.9
Q ss_pred CCCEEEEeccccccchHHHHHH
Q 011108 219 KRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 219 ~~~fyI~GESYgG~YvP~lA~~ 240 (493)
..++++.|+|+||..+-.+|..
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~ 161 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAY 161 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHh
Confidence 4589999999999999887764
No 175
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=51.15 E-value=36 Score=36.78 Aligned_cols=114 Identities=20% Similarity=0.370 Sum_probs=70.0
Q ss_pred eEEEEEEeCCCCCCCCCEEEEEcCCCChhhh-hhhhhhhcC-CeEEcCCCCccccCCCCccccccEEEEeCCCCcccccC
Q 011108 108 SLFYYFAESPQNSSTNPLLLWLNGGPGCSSL-GYGAMSELG-PFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (493)
Q Consensus 108 ~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl-~~G~f~E~G-P~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~ 185 (493)
.++|+|-+.. -.-||.+.+.|==..-+. ||++|-.+| ||. ||=| |+=-|-++-
T Consensus 277 Ei~yYFnPGD---~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~PfL---------------------L~~D-pRleGGaFY 331 (511)
T TIGR03712 277 EFIYYFNPGD---FKPPLNVYFSGYRPAEGFEGYFMMKRLGAPFL---------------------LIGD-PRLEGGAFY 331 (511)
T ss_pred eeEEecCCcC---CCCCeEEeeccCcccCcchhHHHHHhcCCCeE---------------------Eeec-cccccceee
Confidence 4666665543 345999999984434442 245666665 775 4445 444454553
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCcc
Q 011108 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (493)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 265 (493)
-.+..| -+.+.+.+++-++.. .++.+++.+.|=|+|-.=+-+.++ .++=++|+||=|++
T Consensus 332 lGs~ey--------E~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga------------~l~P~AIiVgKPL~ 390 (511)
T TIGR03712 332 LGSDEY--------EQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA------------KLSPHAIIVGKPLV 390 (511)
T ss_pred eCcHHH--------HHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc------------cCCCceEEEcCccc
Confidence 333323 233334444444433 688899999999998765555553 45678899998888
Q ss_pred Cc
Q 011108 266 DG 267 (493)
Q Consensus 266 d~ 267 (493)
+-
T Consensus 391 NL 392 (511)
T TIGR03712 391 NL 392 (511)
T ss_pred ch
Confidence 74
No 176
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=49.97 E-value=1.8e+02 Score=28.97 Aligned_cols=59 Identities=12% Similarity=0.070 Sum_probs=40.8
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
+.++.|+.-.+.|. +.-|+ -|+++.|.|+||..+=.+|.++..+-+. ..-+.|.+.+..
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~~-------Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGEE-------VAFLGLLDAVPP 104 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCCe-------EEEEEEeccCCC
Confidence 55666666555554 34444 3999999999999999999999776432 445555555444
No 177
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.53 E-value=26 Score=36.44 Aligned_cols=118 Identities=18% Similarity=0.266 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhhcCCeEE----cCCCCccccCCCCccccccEEEEeCCCCcccccCCCCC--CCccC
Q 011108 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRV----NKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKS--DYELN 194 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v----~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~--~~~~~ 194 (493)
..+-+++++|| |.+=.|=+++|. +..+.- -+-|+||+....+ +|.
T Consensus 114 ~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~-------------------~~pVvFSWPS~g~l~~Yn-- 164 (377)
T COG4782 114 SAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGND-------------------GVPVVFSWPSRGSLLGYN-- 164 (377)
T ss_pred CCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCC-------------------cceEEEEcCCCCeeeecc--
Confidence 67899999998 666666677763 222211 2445555543322 332
Q ss_pred ChHHHHHHHHHHHHHHHHHCC-CCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCccc
Q 011108 195 GDKLTAQDSYTFLVNWLERFP-QYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP-~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~ 269 (493)
-|++.++.....|...++..- +-.-+++||..||+|.-.+-..-.++.-++.+ ..+..++=+++-.|-+|-+.
T Consensus 165 ~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~--~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 165 YDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADR--PLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred cchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCc--chhhhhhheEeeCCCCChhh
Confidence 444444444444444443321 12245799999999988777777776655532 14566888888888887654
No 178
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=49.26 E-value=4.1e+02 Score=29.53 Aligned_cols=29 Identities=24% Similarity=0.146 Sum_probs=26.1
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHCC
Q 011108 402 SGIRVWIYSGDVDGIVPTTASRYSINALN 430 (493)
Q Consensus 402 ~~irVliysGd~D~ivp~~gt~~~i~~L~ 430 (493)
-..+|+++.|..|-|+|+.++....+.+.
T Consensus 440 I~~Pvl~va~~~DHIvPw~s~~~~~~l~g 468 (560)
T TIGR01839 440 VKCDSFSVAGTNDHITPWDAVYRSALLLG 468 (560)
T ss_pred CCCCeEEEecCcCCcCCHHHHHHHHHHcC
Confidence 36999999999999999999998888765
No 179
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=49.10 E-value=10 Score=34.95 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=47.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhhc----CCeEEcCCCCccccCCCC--ccccccEEEEeCCCCccccc-CCC
Q 011108 121 STNPLLLWLNGGPGCSSLGYGAMSEL----GPFRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSY-SST 187 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSSl~~G~f~E~----GP~~v~~~~~~l~~N~~s--Wn~~anvLfiDqP~GvGfSy-~~~ 187 (493)
...+|=|-+.|| |||++.|++=.+. +-..+..+|-++.-.+.+ +-+-+-|=|+|...|.||-. .|+
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~~NP 148 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNP 148 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEecCC
Confidence 346799999998 9999877664332 224555566555555544 55778899999999999998 554
No 180
>PLN02429 triosephosphate isomerase
Probab=48.20 E-value=46 Score=34.09 Aligned_cols=60 Identities=20% Similarity=0.346 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 198 LTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
+.++.+..|+++|+.. +-+-....+-|. |||-.-|.-+..+... .++.|++||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 4688889999999875 322222344444 9999999999888654 3589999999998754
No 181
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=47.99 E-value=79 Score=33.65 Aligned_cols=89 Identities=19% Similarity=0.210 Sum_probs=59.7
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHH
Q 011108 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (493)
Q Consensus 120 ~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (493)
..++|+||...| |++.. .|.+- +-+=-=.+|.|+||. .=-|=|.... .|+..-+..+.
T Consensus 60 ~~drPtV~~T~G--------Y~~~~--~p~r~----------Ept~Lld~NQl~vEh-RfF~~SrP~p-~DW~~Lti~QA 117 (448)
T PF05576_consen 60 DFDRPTVLYTEG--------YNVST--SPRRS----------EPTQLLDGNQLSVEH-RFFGPSRPEP-ADWSYLTIWQA 117 (448)
T ss_pred CCCCCeEEEecC--------ccccc--Ccccc----------chhHhhccceEEEEE-eeccCCCCCC-CCcccccHhHh
Confidence 367899999987 44321 23321 112223589999996 5555555432 45544588999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccch
Q 011108 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYV 234 (493)
Q Consensus 200 A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~Yv 234 (493)
|.|.+...+.|-..+|+ ++.-+|-|=||.-.
T Consensus 118 A~D~Hri~~A~K~iY~~----kWISTG~SKGGmTa 148 (448)
T PF05576_consen 118 ASDQHRIVQAFKPIYPG----KWISTGGSKGGMTA 148 (448)
T ss_pred hHHHHHHHHHHHhhccC----CceecCcCCCceeE
Confidence 99999988888665433 69999999999854
No 182
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=47.11 E-value=11 Score=35.57 Aligned_cols=17 Identities=29% Similarity=0.784 Sum_probs=14.3
Q ss_pred CCCCEEEEEcCCCChhh
Q 011108 121 STNPLLLWLNGGPGCSS 137 (493)
Q Consensus 121 ~~~PlvlWLnGGPGcSS 137 (493)
.++|-|+|+=|||||--
T Consensus 5 ~~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGK 21 (195)
T ss_pred ccCCCEEEEEcCCCCCc
Confidence 46799999999999853
No 183
>PLN02561 triosephosphate isomerase
Probab=46.85 E-value=49 Score=32.81 Aligned_cols=60 Identities=18% Similarity=0.256 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
.+.++++..++++++.+ |..-...++-|. |||-.-|.=+..+... .++.|++||.+.+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 34688889999998864 432223345454 9999999999888654 459999999999996
No 184
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=43.94 E-value=19 Score=37.85 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=25.7
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHH
Q 011108 205 TFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTIL 242 (493)
Q Consensus 205 ~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~ 242 (493)
.-|++..+.-=+..++++.|.|||+||-++-.+-....
T Consensus 104 ~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 104 TKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 33444443321233789999999999999888776663
No 185
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=42.41 E-value=65 Score=30.13 Aligned_cols=66 Identities=21% Similarity=0.091 Sum_probs=37.7
Q ss_pred ccccEEEEeCCCC--cccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHH
Q 011108 167 NVANVVFLESPAG--VGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 167 ~~anvLfiDqP~G--vGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~ 240 (493)
+.|-|.|++-.+. ...+-.. .. --+..|.++-.|+...-... =..-.+-++|||||+.-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~--~~----~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAAS--PG----YARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccC--ch----HHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhh
Confidence 7888888854333 3322111 11 11345566666666554443 113468999999999877655544
No 186
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=40.97 E-value=92 Score=32.66 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=66.9
Q ss_pred HHHHHhChHHHHHHhccCCCCCcccCccccCCCCCCCcHHHHHHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCC
Q 011108 355 YVEAYLNTREVQTVLHVKPTNWTACSNLFNWTDSPSTVLPTIKNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVE 434 (493)
Q Consensus 355 ~~~~ylN~~~Vq~ALhv~~~~w~~cs~v~~~~d~~~s~~~~l~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~ 434 (493)
.+..+||.|..++.+.+-. -+.....| .++-+|++|--|--.....+..+.+.|.
T Consensus 235 gi~~~l~tp~f~~L~~ivD------------------P~~Y~~rL---~~PK~ii~atgDeFf~pD~~~~y~d~L~---- 289 (367)
T PF10142_consen 235 GITQQLDTPEFDKLMQIVD------------------PYSYRDRL---TMPKYIINATGDEFFVPDSSNFYYDKLP---- 289 (367)
T ss_pred CchhhcCCHHHHHHHHhcC------------------HHHHHHhc---CccEEEEecCCCceeccCchHHHHhhCC----
Confidence 3567888888888765432 11222333 6999999999999888889999999987
Q ss_pred CCcccceeCCccccEEEEecCeEEEEEcCCCccCcc-cChHHHHHHHHHHHcCCCCCC
Q 011108 435 IPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPS-DQPERALTLISSFLHGILPPS 491 (493)
Q Consensus 435 ~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~-dqP~~al~l~~~fl~g~~~p~ 491 (493)
+.=.+-.|+++||..-. +--+.....+.+.+.|+++|.
T Consensus 290 -------------------G~K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~~~lP~ 328 (367)
T PF10142_consen 290 -------------------GEKYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNGRPLPQ 328 (367)
T ss_pred -------------------CCeeEEeCCCCCcccchHHHHHHHHHHHHHHHcCCCCCe
Confidence 11256788999998754 334555666777788999985
No 187
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=39.41 E-value=40 Score=31.39 Aligned_cols=86 Identities=16% Similarity=0.194 Sum_probs=54.1
Q ss_pred ccEEEEeCCCCccc-ccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccC
Q 011108 169 ANVVFLESPAGVGF-SYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (493)
Q Consensus 169 anvLfiDqP~GvGf-Sy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~ 247 (493)
.++--|+-|+..+. +|.. +...-++++...+.++..+-|. .+|.|+|-|=|+..+-..+.. ...
T Consensus 40 ~~~~~V~YpA~~~~~~y~~--------S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~----~~l 104 (179)
T PF01083_consen 40 VAVQGVEYPASLGPNSYGD--------SVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSG----DGL 104 (179)
T ss_dssp EEEEE--S---SCGGSCHH--------HHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHH----TTS
T ss_pred eEEEecCCCCCCCcccccc--------cHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHh----ccC
Confidence 34555777888777 4432 5667788888999999999885 589999999999887776655 111
Q ss_pred CCCceeeeee-eEecCCccCccc
Q 011108 248 TKNTVINLKG-IAIGNALIDGPT 269 (493)
Q Consensus 248 ~~~~~inLkG-i~IGNg~id~~~ 269 (493)
.....-++.+ +++|||.-.+..
T Consensus 105 ~~~~~~~I~avvlfGdP~~~~~~ 127 (179)
T PF01083_consen 105 PPDVADRIAAVVLFGDPRRGAGQ 127 (179)
T ss_dssp SHHHHHHEEEEEEES-TTTBTTT
T ss_pred ChhhhhhEEEEEEecCCcccCCc
Confidence 1112344666 588888775433
No 188
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=38.75 E-value=33 Score=28.36 Aligned_cols=58 Identities=17% Similarity=0.256 Sum_probs=33.1
Q ss_pred EEEEEcCCCChhhhhhhhhhhc---CCeEEcCCCCccccCCCCcc--ccccEEEEeCCCCcccc
Q 011108 125 LLLWLNGGPGCSSLGYGAMSEL---GPFRVNKDGKTLFRNNYAWN--NVANVVFLESPAGVGFS 183 (493)
Q Consensus 125 lvlWLnGGPGcSSl~~G~f~E~---GP~~v~~~~~~l~~N~~sWn--~~anvLfiDqP~GvGfS 183 (493)
|=|-+.|| |||++.|++=.+. +-..+..+|-++.-.+.|-. +-+-|=|+|...|.||-
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF~ 90 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGFS 90 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcEE
Confidence 78888988 9999877664322 12233333434444444433 33446677777776663
No 189
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=38.23 E-value=39 Score=24.59 Aligned_cols=11 Identities=36% Similarity=0.283 Sum_probs=7.1
Q ss_pred ChhHHHHHHHH
Q 011108 1 MKKIIALFSWL 11 (493)
Q Consensus 1 ~~~~~~~~~~~ 11 (493)
|||+|++...+
T Consensus 2 mKk~i~~i~~~ 12 (48)
T PRK10081 2 VKKTIAAIFSV 12 (48)
T ss_pred hHHHHHHHHHH
Confidence 78888853333
No 190
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=38.02 E-value=69 Score=31.24 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=46.4
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEc-CCCccCcccCh--HHHH
Q 011108 401 ASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVR-GAGHLVPSDQP--ERAL 477 (493)
Q Consensus 401 ~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~-gAGH~vP~dqP--~~al 477 (493)
+-..||++..|+.|-+||......|-+.|+=. -.++-|++.|.+.+.-.+. .+-=.-|.|++ +.|+
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-----------~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~ 230 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKEN-----------PAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAY 230 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcC-----------cccceeEEEcCCccchhhhhccCCCChhHHHHHHHHH
Confidence 34689999999999999999998888887611 1233344444443222221 22222466665 5677
Q ss_pred HHHHHHHc
Q 011108 478 TLISSFLH 485 (493)
Q Consensus 478 ~l~~~fl~ 485 (493)
+.+.+|++
T Consensus 231 ~~~~~Wf~ 238 (242)
T KOG3043|consen 231 QRFISWFK 238 (242)
T ss_pred HHHHHHHH
Confidence 77777764
No 191
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=37.53 E-value=2.1e+02 Score=31.26 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=22.5
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeccccccchHHHH
Q 011108 205 TFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLA 238 (493)
Q Consensus 205 ~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA 238 (493)
+++++-...|- =-.+++-|+|||.||..|-.+.
T Consensus 181 ~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 181 RWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHh
Confidence 44555555552 2345799999999999886544
No 192
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=37.52 E-value=1e+02 Score=30.35 Aligned_cols=59 Identities=22% Similarity=0.401 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 198 LTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 198 ~~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
+.++++..++++++.. +.+ ....+-|. |||-.-|.=+..+.+.. ++.|++||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 4688889999999875 333 33344444 99999999888887653 489999999998743
No 193
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=37.21 E-value=35 Score=36.06 Aligned_cols=37 Identities=35% Similarity=0.679 Sum_probs=27.9
Q ss_pred ceeEEEEEEecCCCCceEEEEEEeCCCCCCCCCEE-EEEcC
Q 011108 92 FDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLL-LWLNG 131 (493)
Q Consensus 92 ~~~ysGyv~v~~~~~~~lFy~f~es~~~~~~~Plv-lWLnG 131 (493)
...-.||++.|.+ |+|.. +.|+.....+-||| +||.|
T Consensus 198 ~~~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 198 GTYKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 3457999999965 77777 77875555676876 89987
No 194
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=37.02 E-value=27 Score=28.60 Aligned_cols=28 Identities=32% Similarity=0.498 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEecccc
Q 011108 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYA 230 (493)
Q Consensus 201 ~d~~~fL~~f~~~fP~y~~~~fyI~GESYg 230 (493)
-|+|++.+.|+-++ |-.+.|.+-|+||+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 47888899999884 88889999999983
No 195
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.58 E-value=52 Score=33.15 Aligned_cols=38 Identities=16% Similarity=0.336 Sum_probs=30.6
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEecccccc
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGH 232 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~ 232 (493)
.-.+.+.-+++.+.......|+=..-++|+.|||-|..
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 34567778888888888889987777899999998754
No 196
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=36.02 E-value=31 Score=32.82 Aligned_cols=56 Identities=23% Similarity=0.275 Sum_probs=39.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcccChHHHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPSDQPERALTLISS 482 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~dqP~~al~l~~~ 482 (493)
-.+++|.+|+.|.++...-...|.+. ..++.+++.+|.|+-.-.-. ..-+.+..
T Consensus 149 P~~~lvi~g~~Ddvv~l~~~l~~~~~-------------------------~~~~~i~i~~a~HFF~gKl~-~l~~~i~~ 202 (210)
T COG2945 149 PSPGLVIQGDADDVVDLVAVLKWQES-------------------------IKITVITIPGADHFFHGKLI-ELRDTIAD 202 (210)
T ss_pred CCCceeEecChhhhhcHHHHHHhhcC-------------------------CCCceEEecCCCceecccHH-HHHHHHHH
Confidence 47899999999977776655444443 23688999999999766554 34444555
Q ss_pred HH
Q 011108 483 FL 484 (493)
Q Consensus 483 fl 484 (493)
|+
T Consensus 203 ~l 204 (210)
T COG2945 203 FL 204 (210)
T ss_pred Hh
Confidence 55
No 197
>PTZ00333 triosephosphate isomerase; Provisional
Probab=35.27 E-value=93 Score=30.85 Aligned_cols=60 Identities=18% Similarity=0.307 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
.+.++++..++++++.. |-+......-|. |||-.-|.-+..+... .++.|++||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 45788999999998864 433223344444 9999999999888664 359999999999874
No 198
>COG5510 Predicted small secreted protein [Function unknown]
Probab=35.12 E-value=51 Score=23.43 Aligned_cols=12 Identities=50% Similarity=0.670 Sum_probs=7.6
Q ss_pred ChhHHHHHHHHH
Q 011108 1 MKKIIALFSWLL 12 (493)
Q Consensus 1 ~~~~~~~~~~~~ 12 (493)
|||.+.+.+++|
T Consensus 2 mk~t~l~i~~vl 13 (44)
T COG5510 2 MKKTILLIALVL 13 (44)
T ss_pred chHHHHHHHHHH
Confidence 788777554443
No 199
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.94 E-value=49 Score=37.87 Aligned_cols=96 Identities=19% Similarity=0.230 Sum_probs=51.5
Q ss_pred EEEEEcCCCCh----hhhh--hhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHH
Q 011108 125 LLLWLNGGPGC----SSLG--YGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKL 198 (493)
Q Consensus 125 lvlWLnGGPGc----SSl~--~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~ 198 (493)
-||++-|--|+ =|++ --+-...||++-..+ ..|+++. +.+-|=|=| -||. .......+
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~----~d~~~~~-DFFaVDFnE-----e~tA------m~G~~l~d 154 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTED----RDNPFSF-DFFAVDFNE-----EFTA------MHGHILLD 154 (973)
T ss_pred eEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhc----ccCcccc-ceEEEcccc-----hhhh------hccHhHHH
Confidence 36788776663 2332 022335789984333 2466655 222221111 1221 11124556
Q ss_pred HHHHHHHHHHHHH---HHCCCCC---CCCEEEEeccccccchHH
Q 011108 199 TAQDSYTFLVNWL---ERFPQYK---KRDFYIAGESYAGHYVPQ 236 (493)
Q Consensus 199 ~A~d~~~fL~~f~---~~fP~y~---~~~fyI~GESYgG~YvP~ 236 (493)
.+|.+.+++..-+ +.-+||+ ..++.|.||||||..+-.
T Consensus 155 QtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 155 QTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 6676666655444 4445666 566999999999975543
No 200
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=34.86 E-value=1.2e+02 Score=30.03 Aligned_cols=60 Identities=20% Similarity=0.310 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.+.++++..|+++++.. |. -...++-|. |||-.-|.=+..+... .++.|++||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 35788999999999864 32 122344444 9999999999888654 3589999999998754
No 201
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=34.73 E-value=28 Score=32.84 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHH
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAY 239 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~ 239 (493)
+...+|+.. ..+|++..|+....++.++|-|+||+++-.+|.
T Consensus 76 ~~~~~~~~a-a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 76 EQVAADLQA-AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHHHHHHHH-HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HHHHHHHHH-HHHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 345555544 556777777777789999999999998877764
No 202
>PRK14565 triosephosphate isomerase; Provisional
Probab=34.47 E-value=88 Score=30.70 Aligned_cols=54 Identities=15% Similarity=0.224 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCccc
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~ 269 (493)
.+.++++..+++++. .+.-|. |||..-|.-+..+.+. -++.|++||.+.+++..
T Consensus 173 ~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 173 NDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHHH
Confidence 456888888888763 123333 9999999999988763 24899999999987653
No 203
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=34.12 E-value=1.3e+02 Score=29.83 Aligned_cols=65 Identities=34% Similarity=0.405 Sum_probs=44.3
Q ss_pred cCceEEEEecC------CccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcC--CCccCcccCh
Q 011108 402 SGIRVWIYSGD------VDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRG--AGHLVPSDQP 473 (493)
Q Consensus 402 ~~irVliysGd------~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~g--AGH~vP~dqP 473 (493)
.+++||-+.|+ .|.+||..+++..=.-++ +.+. ..+-.+|.| |.|.--.+.|
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~-------------~~~~-------~Y~e~~v~G~~a~HS~LheN~ 242 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLK-------------NRAK-------SYQEKTVTGKDAQHSQLHENP 242 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCT-------------TTSS-------EEEEEEEESGGGSCCGGGCCH
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhh-------------cccC-------ceEEEEEECCCCccccCCCCH
Confidence 47999999999 899999887754333332 1111 234466765 6999888887
Q ss_pred HHHHHHHHHHHcCC
Q 011108 474 ERALTLISSFLHGI 487 (493)
Q Consensus 474 ~~al~l~~~fl~g~ 487 (493)
.+..+|.+||-++
T Consensus 243 -~V~~~I~~FLw~k 255 (255)
T PF06028_consen 243 -QVDKLIIQFLWGK 255 (255)
T ss_dssp -HHHHHHHHHHCT-
T ss_pred -HHHHHHHHHhcCC
Confidence 6668899998664
No 204
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=32.80 E-value=58 Score=30.05 Aligned_cols=39 Identities=5% Similarity=-0.083 Sum_probs=27.9
Q ss_pred CCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccC
Q 011108 219 KRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (493)
Q Consensus 219 ~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 266 (493)
..+.+|+|||.|+.-+-..+. .+. ..+++|+++..|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~~-------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQS-------QKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HTC-------CSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hcc-------cccccEEEEEcCCCc
Confidence 457999999999987766554 222 456999999999844
No 205
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=32.33 E-value=1.8e+02 Score=29.16 Aligned_cols=94 Identities=22% Similarity=0.264 Sum_probs=57.0
Q ss_pred CCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcc--cccCCCCCCCccCCh
Q 011108 119 NSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVG--FSYSSTKSDYELNGD 196 (493)
Q Consensus 119 ~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvG--fSy~~~~~~~~~~~d 196 (493)
+++..|+|+|=-=|=.|||.+.+.|.|. ..| ++=. -+.=|| .|-| -|+- ...
T Consensus 20 s~s~~P~ii~HGigd~c~~~~~~~~~q~------------l~~-~~g~---~v~~le--ig~g~~~s~l--------~pl 73 (296)
T KOG2541|consen 20 SPSPVPVIVWHGIGDSCSSLSMANLTQL------------LEE-LPGS---PVYCLE--IGDGIKDSSL--------MPL 73 (296)
T ss_pred CcccCCEEEEeccCcccccchHHHHHHH------------HHh-CCCC---eeEEEE--ecCCcchhhh--------ccH
Confidence 3445899999666889999655677652 112 2221 123344 4555 2221 144
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHH
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~ 243 (493)
.+.++-+.+.+. ..|++. .-++|.|.|=||-.+-.++.....
T Consensus 74 ~~Qv~~~ce~v~----~m~~ls-qGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 74 WEQVDVACEKVK----QMPELS-QGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred HHHHHHHHHHHh----cchhcc-CceEEEEEccccHHHHHHHHhCCC
Confidence 455555555444 344543 479999999999988888877644
No 206
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=32.26 E-value=3.9e+02 Score=26.68 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHH
Q 011108 199 TAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQ 236 (493)
Q Consensus 199 ~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~ 236 (493)
-++.+.+-|+=|.+. . ..+..+--|+||||||-.+-.
T Consensus 116 f~~fL~~~lkP~Ie~~y-~~~~~~~~i~GhSlGGLfvl~ 153 (264)
T COG2819 116 FREFLTEQLKPFIEARY-RTNSERTAIIGHSLGGLFVLF 153 (264)
T ss_pred HHHHHHHhhHHHHhccc-ccCcccceeeeecchhHHHHH
Confidence 444444555556665 2 223345899999999998753
No 207
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=31.44 E-value=38 Score=29.92 Aligned_cols=18 Identities=28% Similarity=0.528 Sum_probs=15.2
Q ss_pred CCCCCEEEEEcCCCChhh
Q 011108 120 SSTNPLLLWLNGGPGCSS 137 (493)
Q Consensus 120 ~~~~PlvlWLnGGPGcSS 137 (493)
...+||||=|+|.||+--
T Consensus 49 ~p~KpLVlSfHG~tGtGK 66 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGK 66 (127)
T ss_pred CCCCCEEEEeecCCCCcH
Confidence 367899999999999854
No 208
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=31.39 E-value=79 Score=35.23 Aligned_cols=51 Identities=16% Similarity=0.195 Sum_probs=41.7
Q ss_pred HHhhhcCceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCcc
Q 011108 397 KNLIASGIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVPS 470 (493)
Q Consensus 397 ~~Ll~~~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP~ 470 (493)
+.|++.+.+||+..|..|..|+-..-+..-+.|.- --..++|.+|+|..-.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-----------------------~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-----------------------EVELHVIGGADHSMAI 348 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-----------------------cceEEEecCCCccccC
Confidence 45777899999999999999999998888888762 2257899999998543
No 209
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=31.20 E-value=24 Score=25.03 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=26.6
Q ss_pred cCCccCcccccchhhhhhhhccCCChhhhhchhc
Q 011108 261 GNALIDGPTRSMGVYENLWTHALNSDQTHKGIFT 294 (493)
Q Consensus 261 GNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~ 294 (493)
..|.+||.....-..+-++..|+|+.+....+.+
T Consensus 10 ~gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 10 TGGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TTSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 3488899988877788899999999998876643
No 210
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=30.92 E-value=96 Score=31.61 Aligned_cols=71 Identities=7% Similarity=0.005 Sum_probs=39.8
Q ss_pred ChHHHHHHHHHHHHHHHHHCCC-CCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccc
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQ-YKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTR 270 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~-y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~ 270 (493)
+.++-++|+-.++.-+...... +...++.|+|||=|..=+-.+..+-... .....++|+|+-.|+-|.+..
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~-----~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPS-----PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT--------CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCcc-----ccccceEEEEEeCCCCChhHh
Confidence 6677788887744433333222 4567899999999987666555433211 124669999999998776554
No 211
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=30.86 E-value=37 Score=31.42 Aligned_cols=27 Identities=37% Similarity=0.607 Sum_probs=21.4
Q ss_pred CCEEEEEcCCC--Chhhhhhhhhhhc--CCeE
Q 011108 123 NPLLLWLNGGP--GCSSLGYGAMSEL--GPFR 150 (493)
Q Consensus 123 ~PlvlWLnGGP--GcSSl~~G~f~E~--GP~~ 150 (493)
+--|+.||||| |-||+. -+|+|+ |||.
T Consensus 22 ~griVlLNG~~saGKSSiA-~A~Q~~~a~pwm 52 (205)
T COG3896 22 EGRIVLLNGGSSAGKSSIA-LAFQDLAAEPWM 52 (205)
T ss_pred CceEEEecCCCccchhHHH-HHHHHHhhcchh
Confidence 34578899998 778996 899998 7764
No 212
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=30.82 E-value=34 Score=32.20 Aligned_cols=116 Identities=16% Similarity=0.096 Sum_probs=59.3
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCc-c---CC
Q 011108 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYE-L---NG 195 (493)
Q Consensus 120 ~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~-~---~~ 195 (493)
....|+||+|||+++.++. +..-.+ +. .+. + ..-+.||..|. .|.|.+.. .-++. . ..
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~---~~------~~a-~----~~g~~Vv~Pd~-~g~~~~~~--~~~~~~~~~~~~ 71 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWG---WK------AAA-D----RYGFVLVAPEQ-TSYNSSNN--CWDWFFTHHRAR 71 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcC---hH------HHH-H----hCCeEEEecCC-cCccccCC--CCCCCCccccCC
Confidence 3568999999999876654 210000 00 000 0 12356777775 34332211 00000 0 00
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCc
Q 011108 196 DKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (493)
Q Consensus 196 d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 264 (493)
......|+..++....+++ .....+++|+|+|.||..+-.+|.+- +-.+.++++..|.
T Consensus 72 ~~~~~~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~----------p~~~~~~~~~~g~ 129 (212)
T TIGR01840 72 GTGEVESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTY----------PDVFAGGASNAGL 129 (212)
T ss_pred CCccHHHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhC----------chhheEEEeecCC
Confidence 0112334444444433444 34456899999999999877776542 2236676666554
No 213
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=30.70 E-value=42 Score=32.52 Aligned_cols=26 Identities=15% Similarity=0.268 Sum_probs=22.9
Q ss_pred CceEEEEecCCccccCchhHHHHHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINA 428 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~ 428 (493)
++|++|++|+.|..|+....+..++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 67999999999999999988877765
No 214
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=30.58 E-value=41 Score=29.34 Aligned_cols=64 Identities=20% Similarity=0.293 Sum_probs=40.6
Q ss_pred CCEEEEEcCCCChhhhhhhhh--hhcCCe--EEcCCCCccccCC--CCccccccEEEEeCCCCcccccCCC
Q 011108 123 NPLLLWLNGGPGCSSLGYGAM--SELGPF--RVNKDGKTLFRNN--YAWNNVANVVFLESPAGVGFSYSST 187 (493)
Q Consensus 123 ~PlvlWLnGGPGcSSl~~G~f--~E~GP~--~v~~~~~~l~~N~--~sWn~~anvLfiDqP~GvGfSy~~~ 187 (493)
..|=|-+.|| |||++.|++- .|.+|- .+..+|-.+.-.+ ..+-+-+.|=|+|.+.|.||-+.|+
T Consensus 39 ~~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 39 KGVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred ceEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 3566667665 8888766552 444442 3344443343333 3356678888999999999988664
No 215
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=30.39 E-value=99 Score=34.91 Aligned_cols=61 Identities=18% Similarity=0.286 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.+.|+++..|+++++.. |-+-....+=|. |||---|.-+..|.... ++.|++||.+.+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 46789999999999964 322212233333 99999999999987653 499999999988864
No 216
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=30.27 E-value=47 Score=28.13 Aligned_cols=64 Identities=19% Similarity=0.375 Sum_probs=39.4
Q ss_pred CEEEEEcCCCChhhhhhhhh--hhcCC--eEEcCCCCccccC--CCCccccccEEEEeCCCCcccccCCCC
Q 011108 124 PLLLWLNGGPGCSSLGYGAM--SELGP--FRVNKDGKTLFRN--NYAWNNVANVVFLESPAGVGFSYSSTK 188 (493)
Q Consensus 124 PlvlWLnGGPGcSSl~~G~f--~E~GP--~~v~~~~~~l~~N--~~sWn~~anvLfiDqP~GvGfSy~~~~ 188 (493)
.|=|-+.+ +|||++.|++- .|..+ ..+..++-++.-. ...+-+-+-|=|+|.+.|.||...|+.
T Consensus 25 ~LRi~v~~-~GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NPn 94 (107)
T PRK09502 25 GLRLGVRT-SGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPN 94 (107)
T ss_pred eEEEEEEC-CCcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECCC
Confidence 35555554 48888655542 34433 2334444333333 344667789999999999999986643
No 217
>COG3150 Predicted esterase [General function prediction only]
Probab=28.71 E-value=62 Score=30.20 Aligned_cols=60 Identities=13% Similarity=0.190 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccccchh
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGV 274 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~ 274 (493)
...++++.+...++ ++..++.-|.|-|-||.|+--|+.+- -|+.+ |.||-+-|.....++
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~------------Girav-~~NPav~P~e~l~gy 100 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLC------------GIRAV-VFNPAVRPYELLTGY 100 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHh------------CChhh-hcCCCcCchhhhhhh
Confidence 55667777777666 67888899999999999998888654 24444 668888887765443
No 218
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=28.23 E-value=80 Score=29.92 Aligned_cols=64 Identities=11% Similarity=0.243 Sum_probs=41.4
Q ss_pred EEEEEcCCCChhhhhhhhhh----hc--CCeEEcCCCCccccCCCC--ccccccEEEEeCCCCcccccCCCCC
Q 011108 125 LLLWLNGGPGCSSLGYGAMS----EL--GPFRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSYSSTKS 189 (493)
Q Consensus 125 lvlWLnGGPGcSSl~~G~f~----E~--GP~~v~~~~~~l~~N~~s--Wn~~anvLfiDqP~GvGfSy~~~~~ 189 (493)
|=|-+.|| |||++.|++-. |. +-..+..+|-++.-.+.| +-+-+-|=|+|...|.||.+.|...
T Consensus 25 LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPNa 96 (192)
T PRK11190 25 IRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPNA 96 (192)
T ss_pred EEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCCC
Confidence 44445554 89976666533 21 224445555455555544 5677889999999999999976543
No 219
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=27.51 E-value=21 Score=25.31 Aligned_cols=13 Identities=54% Similarity=0.595 Sum_probs=9.2
Q ss_pred ChhHHHHHHHHHH
Q 011108 1 MKKIIALFSWLLI 13 (493)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (493)
||||+.+.++++.
T Consensus 1 MkKi~~~~i~~~~ 13 (46)
T PF02402_consen 1 MKKIIFIGIFLLT 13 (46)
T ss_pred CcEEEEeHHHHHH
Confidence 8999886655544
No 220
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.34 E-value=89 Score=30.42 Aligned_cols=46 Identities=17% Similarity=0.169 Sum_probs=36.3
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHH
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTI 241 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I 241 (493)
...++..|+.. ...|+.+-|+-...++.++|-|+||+.+-.+|.+.
T Consensus 88 ~~~~~~~d~~a-~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 88 DPAEVLADIDA-ALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred CHHHHHHHHHH-HHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 34667777776 55688888887788899999999999888777553
No 221
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=26.06 E-value=42 Score=31.10 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=22.8
Q ss_pred CCCCCCEEEEeccccccchHHHHHHH
Q 011108 216 QYKKRDFYIAGESYAGHYVPQLAYTI 241 (493)
Q Consensus 216 ~y~~~~fyI~GESYgG~YvP~lA~~I 241 (493)
....-++.|-|.||||+...++|..+
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~ 110 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADEL 110 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhh
Confidence 45667999999999999999999876
No 222
>PRK15492 triosephosphate isomerase; Provisional
Probab=24.91 E-value=1.7e+02 Score=29.06 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 197 KLTAQDSYTFLVNWLE-RFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~-~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.+.+++...++++++. .+-+- ..++-|. |||-.-|.-+..|.... ++.|++||..-+++.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~--------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP--------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC--------CCCEEEeehhhcCHH
Confidence 3467888999999865 34222 3345555 99999999999997653 599999999988875
No 223
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=24.73 E-value=53 Score=31.05 Aligned_cols=64 Identities=9% Similarity=0.184 Sum_probs=41.9
Q ss_pred CEEEEEcCCCChhhhhhhh-h---hhc--CCeEEcCCCCccccCC--CCccccccEEEEeCCCCcccccCCCC
Q 011108 124 PLLLWLNGGPGCSSLGYGA-M---SEL--GPFRVNKDGKTLFRNN--YAWNNVANVVFLESPAGVGFSYSSTK 188 (493)
Q Consensus 124 PlvlWLnGGPGcSSl~~G~-f---~E~--GP~~v~~~~~~l~~N~--~sWn~~anvLfiDqP~GvGfSy~~~~ 188 (493)
.|=|-+.|| |||++.|++ | .|. +=..+..+|-++.-.+ ..+-+-+-|=|+|...|.||.+.|..
T Consensus 23 ~LRv~V~~g-GCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVNP-GTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEECC-ccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 355556664 899776665 2 232 2234444554444444 44678889999999999999997654
No 224
>COG4425 Predicted membrane protein [Function unknown]
Probab=24.69 E-value=1e+02 Score=33.19 Aligned_cols=36 Identities=17% Similarity=0.388 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEecccccc
Q 011108 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGH 232 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~ 232 (493)
.++|+-+++.+-....+.|+=..-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 468999999999999999998888899999998754
No 225
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=24.61 E-value=77 Score=34.13 Aligned_cols=75 Identities=21% Similarity=0.240 Sum_probs=50.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEec---CeEEEEEcCCC---ccCcccChHHH
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQ---GLTLVTVRGAG---HLVPSDQPERA 476 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~---~Ltf~tV~gAG---H~vP~dqP~~a 476 (493)
+++=.++-||=|..||..+. .+.. +|.+++.. .+ +. +.+.+. .+.+....|+- |.--.-.+ +.
T Consensus 373 ~~~~~~~~~DGDgTVp~~S~-~~c~--~w~g~~~~-----~~-~~-~~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~-~l 441 (473)
T KOG2369|consen 373 GLKGGIFYGDGDGTVPLVSA-SMCA--NWQGKQFN-----AG-IA-VTREEDKHQPVNLDESHGSSSAEHVDILGDE-EL 441 (473)
T ss_pred cccCceeecCCCCccchHHH-Hhhh--hhhccccc-----cc-cc-cccccccCCCccccccCCccchhhhhhccCh-HH
Confidence 46667899999999999988 5555 88888644 11 12 333332 37778888887 87666665 55
Q ss_pred HHHHHHHHcCCC
Q 011108 477 LTLISSFLHGIL 488 (493)
Q Consensus 477 l~l~~~fl~g~~ 488 (493)
++.|.+.+.+..
T Consensus 442 ~e~i~k~~~g~~ 453 (473)
T KOG2369|consen 442 LEEILKVLLGAI 453 (473)
T ss_pred HHHHHHHhccCC
Confidence 666666665543
No 226
>PRK06762 hypothetical protein; Provisional
Probab=24.32 E-value=45 Score=30.02 Aligned_cols=14 Identities=21% Similarity=0.513 Sum_probs=12.1
Q ss_pred CEEEEEcCCCChhh
Q 011108 124 PLLLWLNGGPGCSS 137 (493)
Q Consensus 124 PlvlWLnGGPGcSS 137 (493)
|.++|+.|.|||-=
T Consensus 2 ~~li~i~G~~GsGK 15 (166)
T PRK06762 2 TTLIIIRGNSGSGK 15 (166)
T ss_pred CeEEEEECCCCCCH
Confidence 78999999998854
No 227
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=23.37 E-value=93 Score=33.09 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=41.1
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcccc
Q 011108 205 TFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTR 270 (493)
Q Consensus 205 ~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~ 270 (493)
..|.+|++.- +.++.+.|-+-||..+-..+..+.+.+. +-..+++.+..+-||....
T Consensus 157 ~~l~~~i~~~----G~~v~l~GvCqgG~~~laa~Al~a~~~~-----p~~~~sltlm~~PID~~~~ 213 (406)
T TIGR01849 157 DYLIEFIRFL----GPDIHVIAVCQPAVPVLAAVALMAENEP-----PAQPRSMTLMGGPIDARAS 213 (406)
T ss_pred HHHHHHHHHh----CCCCcEEEEchhhHHHHHHHHHHHhcCC-----CCCcceEEEEecCccCCCC
Confidence 4566666542 5569999999999988877777766532 2348888888888887654
No 228
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=23.08 E-value=51 Score=34.65 Aligned_cols=38 Identities=16% Similarity=0.058 Sum_probs=23.2
Q ss_pred CEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCccc
Q 011108 221 DFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (493)
Q Consensus 221 ~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~ 269 (493)
++.++||||||--+-+.+.+- ..+|..++-+||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d-----------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD-----------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH------------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc-----------cCcceEEEeCCcccCCC
Confidence 699999999998666544432 23678888899987753
No 229
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=22.92 E-value=36 Score=37.88 Aligned_cols=39 Identities=10% Similarity=0.053 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHCCCCC-CCCEEEEeccccccchHHHHHH
Q 011108 202 DSYTFLVNWLERFPQYK-KRDFYIAGESYAGHYVPQLAYT 240 (493)
Q Consensus 202 d~~~fL~~f~~~fP~y~-~~~fyI~GESYgG~YvP~lA~~ 240 (493)
+.+.=|++..+..=+.. ++++.|+|||+||.++-+|-..
T Consensus 194 ~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 194 QTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 33344555555321223 5799999999999888877664
No 230
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=22.77 E-value=78 Score=29.88 Aligned_cols=23 Identities=26% Similarity=0.723 Sum_probs=17.2
Q ss_pred CCCCEEEEEcC--CCChhhhhhhhhh
Q 011108 121 STNPLLLWLNG--GPGCSSLGYGAMS 144 (493)
Q Consensus 121 ~~~PlvlWLnG--GPGcSSl~~G~f~ 144 (493)
..+|.+|||.| |-|=|.++ .++.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA-~ale 44 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIA-NALE 44 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHH-HHHH
Confidence 57899999999 66667775 5544
No 231
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=21.95 E-value=46 Score=32.78 Aligned_cols=61 Identities=20% Similarity=0.346 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCcc
Q 011108 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (493)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~ 268 (493)
.+.++++..++++++.. |-+-..+++-|. |||-.-|.=+..+... .++.|++||.+.+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ--------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS--------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC--------CCCCEEEEchhhhccc
Confidence 45788999999998754 211112233333 8999999888777654 3599999999998875
No 232
>PF13974 YebO: YebO-like protein
Probab=21.88 E-value=1.6e+02 Score=23.85 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHH
Q 011108 4 IIALFSWLLISTCFLTLLTEFAESNHQADNLYRLI 38 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (493)
+++++.+++|+|+-= ++.+++.|-+-|.++.
T Consensus 6 ~~~lv~livWFFVnR----aSvRANEQI~LL~~il 36 (80)
T PF13974_consen 6 LVLLVGLIVWFFVNR----ASVRANEQIELLEEIL 36 (80)
T ss_pred HHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHH
Confidence 456667777766654 4456677766666664
No 233
>TIGR02011 IscA iron-sulfur cluster assembly protein IscA. This clade is limited to the proteobacteria.
Probab=21.88 E-value=70 Score=26.92 Aligned_cols=64 Identities=19% Similarity=0.332 Sum_probs=40.4
Q ss_pred CCEEEEEcCCCChhhhhhhhh--hhcCCe--EEcCCCCccccCC--CCccccccEEEEeCCCCcccccCCC
Q 011108 123 NPLLLWLNGGPGCSSLGYGAM--SELGPF--RVNKDGKTLFRNN--YAWNNVANVVFLESPAGVGFSYSST 187 (493)
Q Consensus 123 ~PlvlWLnGGPGcSSl~~G~f--~E~GP~--~v~~~~~~l~~N~--~sWn~~anvLfiDqP~GvGfSy~~~ 187 (493)
.+|=|-+.+| |||++.|++- .|..+- .+..+|-++.-.+ ..+-+-+-|=|+|.+.|.||...|+
T Consensus 22 ~~lRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~nP 91 (105)
T TIGR02011 22 FGLRLGVKTS-GCSGMAYVLEFVDEPTPDDIVFEDKGVKIVIDGKSLQYLDGTQLDFVKEGLNEGFKFTNP 91 (105)
T ss_pred ceEEEEEeCC-CCCCEEEEeeecCCCCCCCEEEEcCCEEEEEcHHHhHHhCCCEEEEecCCCcceEEEECC
Confidence 3566666665 8998556553 344442 3344443433333 3466777889999999999998654
No 234
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=21.55 E-value=56 Score=22.91 Aligned_cols=20 Identities=20% Similarity=0.062 Sum_probs=15.9
Q ss_pred chhHHHHHhChHHHHHHhcc
Q 011108 352 TDYYVEAYLNTREVQTVLHV 371 (493)
Q Consensus 352 ~~~~~~~ylN~~~Vq~ALhv 371 (493)
....+-.-|++||||++|++
T Consensus 12 gl~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 12 GLFGLLRALRDPDVQRGLGF 31 (42)
T ss_pred CHHHHHHHHcCHHHHHHHHH
Confidence 33456778999999999985
No 235
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=21.36 E-value=5e+02 Score=27.20 Aligned_cols=107 Identities=21% Similarity=0.340 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCccccccEEEEeCCCCcccccCCCCCCCccCChHHH
Q 011108 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (493)
Q Consensus 120 ~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~~~l~~N~~sWn~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (493)
+.-+-|||...|--| |.|+|=.. ..-.+.+--..||. .|-+-|-+. .++. ++..+
T Consensus 240 ~ngq~LvIC~EGNAG--------FYEvG~m~---tP~~lgYsvLGwNh----------PGFagSTG~---P~p~-n~~nA 294 (517)
T KOG1553|consen 240 GNGQDLVICFEGNAG--------FYEVGVMN---TPAQLGYSVLGWNH----------PGFAGSTGL---PYPV-NTLNA 294 (517)
T ss_pred CCCceEEEEecCCcc--------ceEeeeec---ChHHhCceeeccCC----------CCccccCCC---CCcc-cchHH
Confidence 345689998888644 44555221 10112223334553 455544332 3443 66656
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 200 A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
++-+..|-.+=+ .|+..++.|.|.|-||.-+...|.- .-++|++++ ++-.|+
T Consensus 295 ~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvL-DAtFDD 346 (517)
T KOG1553|consen 295 ADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVL-DATFDD 346 (517)
T ss_pred HHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEe-ecchhh
Confidence 665555554433 6788899999999999988888864 345888865 344443
No 236
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=21.12 E-value=1.2e+02 Score=30.02 Aligned_cols=39 Identities=21% Similarity=0.165 Sum_probs=26.0
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHH
Q 011108 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQ 236 (493)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~ 236 (493)
+..+.|+-+...|...-+ +|.-+.+-+.|||+||.-+-.
T Consensus 81 ~~~~qa~wl~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~~~ 119 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKK---KYHFKKFNLVGHSMGGLSWTY 119 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH---CC--SEEEEEEETHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH---hcCCCEEeEEEECccHHHHHH
Confidence 445566666665554444 577789999999999986643
No 237
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=20.97 E-value=1.3e+02 Score=33.66 Aligned_cols=73 Identities=27% Similarity=0.329 Sum_probs=46.0
Q ss_pred CceEEEEecCCccccCchhHHHHHHHCCCCCCCCcccceeCCccccEEEEecCeEEEEEcCCCccCc------ccCh---
Q 011108 403 GIRVWIYSGDVDGIVPTTASRYSINALNLPVEIPWYPWYTNDEVGGYVEAYQGLTLVTVRGAGHLVP------SDQP--- 473 (493)
Q Consensus 403 ~irVliysGd~D~ivp~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~tV~gAGH~vP------~dqP--- 473 (493)
|.|.+|.+|..|.++|+.-+-+-.-.|+- ++.|- -..|.|+.|.+|=|+=. ++.+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~-------------~~eG~---~s~lrYyeV~naqHfDaf~~~pG~~~r~VP 618 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNR-------------QVEGR---ASRLRYYEVTNAQHFDAFLDFPGFDTRFVP 618 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhh-------------hhccc---ccceeEEEecCCeechhhccCCCCCccccc
Confidence 78999999999999998765443333320 11111 02488999999988722 1111
Q ss_pred -----HHHHHHHHHHH-cCCCCCC
Q 011108 474 -----ERALTLISSFL-HGILPPS 491 (493)
Q Consensus 474 -----~~al~l~~~fl-~g~~~p~ 491 (493)
.+||+++-.+| .|++||.
T Consensus 619 lh~Y~~qALd~M~a~L~~G~~LPp 642 (690)
T PF10605_consen 619 LHPYFFQALDLMWAHLKSGAALPP 642 (690)
T ss_pred ccHHHHHHHHHHHHHhhcCCCCCc
Confidence 56777665554 5777764
No 238
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=20.74 E-value=1.1e+02 Score=33.93 Aligned_cols=136 Identities=22% Similarity=0.208 Sum_probs=83.8
Q ss_pred ecCCCCceEEEEEEeCCCCCCCCCEEEEEcCCCChhhhhhhhhhhcCCeEEcCCC--C--ccccCCCCcc-ccccEEEEe
Q 011108 101 VDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDG--K--TLFRNNYAWN-NVANVVFLE 175 (493)
Q Consensus 101 v~~~~~~~lFy~f~es~~~~~~~PlvlWLnGGPGcSSl~~G~f~E~GP~~v~~~~--~--~l~~N~~sWn-~~anvLfiD 175 (493)
|.-..|-.|.==.+-. ++....|++|-+. .+|++-+... . ...+++--|. +=.-|+..|
T Consensus 24 V~MRDGvrL~~dIy~P-a~~g~~Pvll~~~---------------~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qD 87 (563)
T COG2936 24 VPMRDGVRLAADIYRP-AGAGPLPVLLSRT---------------RLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQD 87 (563)
T ss_pred EEecCCeEEEEEEEcc-CCCCCCceeEEee---------------ccccccccccCcchhhcccccceeecCceEEEEec
Confidence 3334565665544432 2347789998887 3344433211 0 0111111232 235578889
Q ss_pred CCCCcccccCCCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeee
Q 011108 176 SPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (493)
Q Consensus 176 qP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inL 255 (493)
=.|.|-|.+.-.- +. + +-++|-|+ ++.|+.+-|.- +-++-..|-||+|+-.-++|.. .+--|
T Consensus 88 -vRG~~~SeG~~~~-~~--~--~E~~Dg~D-~I~Wia~QpWs-NG~Vgm~G~SY~g~tq~~~Aa~----------~pPaL 149 (563)
T COG2936 88 -VRGRGGSEGVFDP-ES--S--REAEDGYD-TIEWLAKQPWS-NGNVGMLGLSYLGFTQLAAAAL----------QPPAL 149 (563)
T ss_pred -ccccccCCcccce-ec--c--ccccchhH-HHHHHHhCCcc-CCeeeeecccHHHHHHHHHHhc----------CCchh
Confidence 5999999876432 11 3 46778888 77899886554 4589999999999876666642 24559
Q ss_pred eeeEecCCccCcccc
Q 011108 256 KGIAIGNALIDGPTR 270 (493)
Q Consensus 256 kGi~IGNg~id~~~~ 270 (493)
|.|+.--+..|-..+
T Consensus 150 kai~p~~~~~D~y~d 164 (563)
T COG2936 150 KAIAPTEGLVDRYRD 164 (563)
T ss_pred eeecccccccccccc
Confidence 999998888886543
No 239
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=20.67 E-value=88 Score=32.19 Aligned_cols=88 Identities=24% Similarity=0.370 Sum_probs=55.8
Q ss_pred cccEEEEeCCCCcc-cccC----------CCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHH
Q 011108 168 VANVVFLESPAGVG-FSYS----------STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQ 236 (493)
Q Consensus 168 ~anvLfiDqP~GvG-fSy~----------~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~ 236 (493)
..-|+|-|+=+|+| |--. ...+-+. .+..+-.+..|.||...|+ -+..+|++|-|=|..-+-.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg-~gL~~nI~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFG-QGLVQNIREAYRFLIFNYE-----PGDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHH-HHHHHHHHHHHHHHHHhcC-----CCCeEEEeeccchhHHHHH
Confidence 56789999988887 2111 1111122 2666778888999986553 2457999999998766666
Q ss_pred HHHHHHHcccCCCCceeeeeeeEecCCccCcccccchhhhhhhhc
Q 011108 237 LAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTH 281 (493)
Q Consensus 237 lA~~I~~~n~~~~~~~inLkGi~IGNg~id~~~~~~~~~~~~~~~ 281 (493)
||--| ++ -|+++-.+ ..+++++|.|
T Consensus 139 lagmi-r~-----------------vGlls~~~--~~~~d~Aw~~ 163 (423)
T COG3673 139 LAGMI-RH-----------------VGLLSRKH--AARIDEAWAH 163 (423)
T ss_pred HHHHH-HH-----------------hhhhcccc--HHHHHHHHHH
Confidence 66544 22 23444433 5678888875
No 240
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=20.19 E-value=95 Score=32.45 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=23.3
Q ss_pred HHHHHHHC---CCCC----CCCEEEEeccccccchHHHHH
Q 011108 207 LVNWLERF---PQYK----KRDFYIAGESYAGHYVPQLAY 239 (493)
Q Consensus 207 L~~f~~~f---P~y~----~~~fyI~GESYgG~YvP~lA~ 239 (493)
|..++++- |.++ ..++-+.|+||||+-+-+++-
T Consensus 139 lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 139 LLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred HHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 44455544 6454 448999999999998877663
No 241
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=20.03 E-value=3.1e+02 Score=28.49 Aligned_cols=64 Identities=13% Similarity=0.073 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccchHHHHHHHHHcccCCCCceeeeeeeEecCCccCc
Q 011108 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (493)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~y~~~~fyI~GESYgG~YvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id~ 267 (493)
-|+..-..|-+.+..-.+ ..||+-+.|+|.|++-|=.-...+.+++.. .+--.-+++|.|....
T Consensus 200 rA~~aG~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 200 RAEKAGKVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERKAF----GLVENVVLMGAPVPSD 263 (345)
T ss_pred HHHHHHHHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcccc----CeEeeEEEecCCCCCC
Confidence 344444556565555433 778999999999999888877777666322 2323345667666543
Done!