Your job contains 1 sequence.
>011109
MDTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGI
DDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV
DDERVKREAVEPEQKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQE
NMSKASDHMYPHS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011109
(493 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ... 2324 4.0e-241 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 1557 1.4e-161 2
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ... 1573 1.5e-161 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 1565 1.1e-160 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 1565 1.1e-160 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 1565 1.1e-160 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 1534 6.8e-160 2
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 1557 7.5e-160 1
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"... 1552 2.5e-159 1
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 1552 2.5e-159 1
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe... 1552 2.5e-159 1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s... 1537 9.9e-158 1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe... 1537 9.9e-158 1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe... 1535 1.6e-157 1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s... 1535 1.6e-157 1
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s... 1534 2.1e-157 1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp... 1533 2.6e-157 1
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph... 1512 4.4e-155 1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla... 1511 5.6e-155 1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe... 1508 1.2e-154 1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s... 1488 1.5e-152 1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 1484 4.1e-152 1
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe... 1386 3.3e-145 2
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s... 1386 3.3e-145 2
UNIPROTKB|F2Z4Z6 - symbol:HDAC3 "Histone deacetylase" spe... 1386 3.3e-145 2
RGD|619977 - symbol:Hdac3 "histone deacetylase 3" species... 1386 3.3e-145 2
UNIPROTKB|Q6P6W3 - symbol:Hdac3 "Histone deacetylase 3" s... 1386 3.3e-145 2
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe... 1416 6.6e-145 1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe... 1416 6.6e-145 1
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe... 1409 3.6e-144 1
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp... 1381 2.1e-143 2
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s... 1385 1.3e-141 1
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl... 1385 1.3e-141 1
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd... 1383 2.1e-141 1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s... 1383 2.1e-141 1
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe... 1382 2.6e-141 1
TAIR|locus:2098115 - symbol:HDA9 "histone deacetylase 9" ... 1381 3.4e-141 1
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic... 1370 4.9e-140 1
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist... 1370 4.9e-140 1
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric... 1359 7.2e-139 1
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie... 1352 4.0e-138 1
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe... 1317 1.7e-137 2
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 1345 2.2e-137 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 1342 4.6e-137 1
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 1327 1.8e-135 1
UNIPROTKB|D4AEB0 - symbol:Hdac3 "Histone deacetylase" spe... 1258 1.1e-131 2
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica... 1279 2.2e-130 1
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec... 1279 2.2e-130 1
UNIPROTKB|F1M4V8 - symbol:F1M4V8 "Histone deacetylase" sp... 1262 1.4e-128 1
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla... 1244 1.1e-126 1
TAIR|locus:2157111 - symbol:HDA7 "histone deacetylase7" s... 1185 2.0e-120 1
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c... 1180 6.7e-120 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 1168 1.3e-118 1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 1168 1.3e-118 1
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub... 1092 1.4e-110 1
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd... 1076 7.0e-109 1
ASPGD|ASPL0000013866 - symbol:hosA species:162425 "Emeric... 1010 6.9e-102 1
UNIPROTKB|E7ESJ6 - symbol:HDAC3 "Histone deacetylase 3" s... 715 3.9e-87 2
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 859 6.9e-86 1
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety... 864 1.3e-85 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 855 1.8e-85 1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 855 1.8e-85 1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s... 853 3.0e-85 1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe... 846 1.7e-84 1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe... 843 3.4e-84 1
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s... 834 3.1e-83 1
UNIPROTKB|Q5TEE2 - symbol:HDAC1 "Histone deacetylase 1" s... 532 3.6e-82 2
UNIPROTKB|F5GXM1 - symbol:HDAC1 "Histone deacetylase 1" s... 787 3.0e-78 1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe... 774 7.1e-77 1
RGD|1309799 - symbol:Hdac1 "histone deacetylase 1" specie... 632 7.9e-62 1
UNIPROTKB|H3BM24 - symbol:HDAC2 "Histone deacetylase 2" s... 608 2.7e-59 1
UNIPROTKB|A6NGJ7 - symbol:HDAC8 "Histone deacetylase 8" s... 581 4.2e-59 2
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 573 1.4e-55 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 573 1.4e-55 1
UNIPROTKB|A6NMT1 - symbol:HDAC8 "Histone deacetylase 8" s... 568 4.8e-55 1
UNIPROTKB|I3L5X0 - symbol:HDAC8 "Uncharacterized protein"... 568 4.8e-55 1
UNIPROTKB|E7ENE4 - symbol:HDAC8 "Histone deacetylase 8" s... 557 7.0e-54 1
CGD|CAL0001747 - symbol:HOS1 species:5476 "Candida albica... 502 4.8e-52 2
UNIPROTKB|Q59Q78 - symbol:HOS1 "Likely histone deacetylas... 502 4.8e-52 2
SGD|S000006272 - symbol:HOS1 "Class I histone deacetylase... 426 4.2e-47 2
UNIPROTKB|B4DQE7 - symbol:HDAC8 "cDNA FLJ58211, highly si... 451 1.2e-42 1
UNIPROTKB|E7EWI8 - symbol:HDAC3 "Histone deacetylase 3" s... 249 3.3e-40 2
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 420 2.3e-39 1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ... 420 2.3e-39 1
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote... 417 4.8e-39 1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr... 417 4.8e-39 1
TIGR_CMR|SPO_2177 - symbol:SPO_2177 "acetoin utilization ... 387 7.2e-36 1
UNIPROTKB|E7EVA8 - symbol:HDAC8 "Histone deacetylase 8" s... 382 2.4e-35 1
UNIPROTKB|F1RPM1 - symbol:LOC100625846 "Uncharacterized p... 374 1.7e-34 1
TAIR|locus:2076053 - symbol:hda17 "histone deacetylase 17... 372 2.8e-34 1
UNIPROTKB|E7EW22 - symbol:HDAC8 "Histone deacetylase 8" s... 368 7.4e-34 1
UNIPROTKB|F1N0W0 - symbol:HDAC3 "Uncharacterized protein"... 354 2.3e-32 1
UNIPROTKB|E5RG37 - symbol:HDAC2 "Histone deacetylase 2" s... 331 8.2e-30 1
UNIPROTKB|E5RFP9 - symbol:HDAC2 "Histone deacetylase 2" s... 325 4.2e-29 1
UNIPROTKB|E5RH52 - symbol:HDAC2 "Histone deacetylase 2" s... 325 4.2e-29 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 342 1.4e-28 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 342 1.4e-28 1
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 305 8.4e-27 1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 321 8.5e-26 1
UNIPROTKB|C9J8F0 - symbol:HDAC8 "Histone deacetylase 8" s... 295 1.1e-25 1
WARNING: Descriptions of 132 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 2324 (823.1 bits), Expect = 4.0e-241, P = 4.0e-241
Identities = 425/498 (85%), Positives = 461/498 (92%)
Query: 1 MDTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ 60
MDTGGNSL SG DGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQ+MQ
Sbjct: 1 MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60
Query: 61 VLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQT 120
VLKPFPAR+RDLCRFHADDYVSFLRSITPETQQDQ+RQLKRFNVGEDCPVFDGL+SFCQT
Sbjct: 61 VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 121 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
YAGGSVGG+VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121 YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
Query: 181 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGI 240
VDIDIHHGDGVEEAFY TDRVMTVSFHKFGDYFPGTG I+DIGY GK+YSLNVPLDDGI
Sbjct: 181 VDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGI 240
Query: 241 DDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
DDESYH LFKPI+GKVME+FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
Sbjct: 241 DDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
Query: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360
VPLLLLGGGGYTIRNVARCWCYETGVALGVEV+DKMP+HEYYEYFGPDYTLHVAPSNMEN
Sbjct: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMEN 360
Query: 361 KNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV 420
KNSRQ+LEEIRN LL LSKLQHAPSV FQERPPD+E PE DEDQEDGD+RWDPDSDMDV
Sbjct: 361 KNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKRWDPDSDMDV 420
Query: 421 DDER------VKREAVEPEQKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPS 474
DD+R VKREAVEP+ KD++GLKG+ E+ +G ++ D+S STKV ++ + ++E S
Sbjct: 421 DDDRKPIPSRVKREAVEPDTKDKDGLKGIMERGKGCEVEVDESGSTKVTGVNPVGVEEAS 480
Query: 475 IKVEQENMSKA-SDHMYP 491
+K+E+E +K ++ +P
Sbjct: 481 VKMEEEGTNKGGAEQAFP 498
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 1557 (553.2 bits), Expect = 1.4e-161, Sum P(2) = 1.4e-161
Identities = 280/437 (64%), Positives = 345/437 (78%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ AGGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
+I KVME F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--R 427
+L E L L HAP VQ Q P D+ ED D +E DP+ + + D+R+
Sbjct: 364 QRLFENLRMLPHAPGVQMQPIPEDA----VQEDSGDEEEE-DPEKRISIRNSDKRISCDE 418
Query: 428 EAVEPEQKDREGLKGMA 444
E + E + G K +A
Sbjct: 419 EFSDSEDEGEGGRKNVA 435
Score = 38 (18.4 bits), Expect = 1.4e-161, Sum P(2) = 1.4e-161
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 409 DERWDPDSDMDVDDERVKREAVEPE 433
+E+ + + + ++E+ K E EP+
Sbjct: 447 EEKEEEEKKDEKEEEKAKEEKAEPK 471
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
Identities = 291/431 (67%), Positives = 347/431 (80%)
Query: 2 DTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQV 61
D G SLPSG DG KR+V YFY+P +G+YYYGQGHPMKPHRIRM H+L+ HY L + +++
Sbjct: 4 DESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEI 63
Query: 62 LKPFPARERDLCRFHADDYVSFLRSITPETQQDQ--LRQLKRFNVGEDCPVFDGLFSFCQ 119
+P A D+ RFH+ +YV FL S++PE+ D R L+RFNVGEDCPVFDGLF FC+
Sbjct: 64 SRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCR 123
Query: 120 TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL 179
AGGS+G AVKLN DIAINW GGLHHAKK EASGFCYVNDIVL ILELLK +RVL
Sbjct: 124 ASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVL 183
Query: 180 YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDG 239
Y+DID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG IRD+G KGK+Y+LNVPL+DG
Sbjct: 184 YIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDG 243
Query: 240 IDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF 299
+DDES+ LF+P+I KVMEV++P AVVLQCGADSLSGDRLGCFNLS+KGHA+C++F+RS+
Sbjct: 244 MDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSY 303
Query: 300 NVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNME 359
NVPL++LGGGGYTIRNVARCWCYET VA+GVE D+K+P +EY+EYFGPDYTLHV PS ME
Sbjct: 304 NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPME 363
Query: 360 NKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSE-LPEADEDQEDGDER--WDP-- 414
N N+ + +E IRN LLE LS L HAPSVQFQ PP + L E ++D E + W
Sbjct: 364 NLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEDDMETRPKPRIWSGTA 423
Query: 415 --DSDMDVDDE 423
+SD D DD+
Sbjct: 424 TYESDSDDDDK 434
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 1565 (556.0 bits), Expect = 1.1e-160, P = 1.1e-160
Identities = 283/433 (65%), Positives = 346/433 (79%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWDPDSDMDVDDERVKREA 429
+L E L L HAP VQ Q P D+ +PE DED+ED D+R S D+R+ E
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSS----DKRIACEE 418
Query: 430 VEPEQKDREGLKG 442
E D EG G
Sbjct: 419 -EFSDSDEEGEGG 430
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 1565 (556.0 bits), Expect = 1.1e-160, P = 1.1e-160
Identities = 283/433 (65%), Positives = 346/433 (79%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWDPDSDMDVDDERVKREA 429
+L E L L HAP VQ Q P D+ +PE DED+ED D+R S D+R+ E
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSS----DKRIACEE 418
Query: 430 VEPEQKDREGLKG 442
E D EG G
Sbjct: 419 -EFSDSDEEGEGG 430
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 1565 (556.0 bits), Expect = 1.1e-160, P = 1.1e-160
Identities = 283/433 (65%), Positives = 346/433 (79%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWDPDSDMDVDDERVKREA 429
+L E L L HAP VQ Q P D+ +PE DED+ED D+R S D+R+ E
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSS----DKRIACEE 418
Query: 430 VEPEQKDREGLKG 442
E D EG G
Sbjct: 419 -EFSDSDEEGEGG 430
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 1534 (545.1 bits), Expect = 6.8e-160, Sum P(2) = 6.8e-160
Identities = 277/427 (64%), Positives = 338/427 (79%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
+ G K+KVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 5 SQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 64
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVK
Sbjct: 65 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVK 124
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIAINWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 125 LNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 184
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 185 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 244
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
I+ KVME+++P AVVLQCGADSLSGDRLGCFNL+IKGHA+CV++M+SFN+PLL+LGGGGY
Sbjct: 245 IMSKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGY 304
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TI+NVARCW +ET VAL + +++P ++Y+EYFGPD+ LH++P NM N+N+ LE+I+
Sbjct: 305 TIKNVARCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHISPFNMTNQNTNDYLEKIK 364
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVE 431
+L E L L HAP VQ Q P D+ ED GDE DPD + + KR A +
Sbjct: 365 QRLFENLRMLPHAPGVQMQAIPEDA----VQEDS--GDEEDDPDKRISIRAHD-KRIACD 417
Query: 432 PEQKDRE 438
E D E
Sbjct: 418 EEFSDSE 424
Score = 45 (20.9 bits), Expect = 6.8e-160, Sum P(2) = 6.8e-160
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 403 EDQEDGDERWDPDSDMDVDDERVKREAVEPEQK 435
E+++DG+E+ D + +E++ + + E K
Sbjct: 446 EEEKDGEEKKDVKEEEKASEEKMDTKGPKEELK 478
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 1557 (553.2 bits), Expect = 7.5e-160, P = 7.5e-160
Identities = 280/427 (65%), Positives = 342/427 (80%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVE 431
+L E L L HAP VQ Q P D+ +PE D ED D DPD + + KR A E
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA-IPEESGD-EDED---DPDKRISICSSD-KRIACE 417
Query: 432 PEQKDRE 438
E D E
Sbjct: 418 EEFSDSE 424
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 1552 (551.4 bits), Expect = 2.5e-159, P = 2.5e-159
Identities = 282/434 (64%), Positives = 346/434 (79%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIK-GHAECVKFMRSFNVPLLLLGGGG 310
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IK GHA+CV+F++SFN+P+L+LGGGG
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGG 303
Query: 311 YTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEI 370
YTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I
Sbjct: 304 YTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKI 363
Query: 371 RNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWDPDSDMDVDDERVKRE 428
+ +L E L L HAP VQ Q P D+ +PE DED+ED D+R S D+R+ E
Sbjct: 364 KQRLFENLRMLPHAPGVQMQVIPEDA-IPEESGDEDEEDPDKRISICSS----DKRIACE 418
Query: 429 AVEPEQKDREGLKG 442
E D EG G
Sbjct: 419 E-EFSDSDEEGEGG 431
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 1552 (551.4 bits), Expect = 2.5e-159, P = 2.5e-159
Identities = 282/434 (64%), Positives = 346/434 (79%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIK-GHAECVKFMRSFNVPLLLLGGGG 310
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IK GHA+CV+F++SFN+P+L+LGGGG
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGG 303
Query: 311 YTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEI 370
YTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I
Sbjct: 304 YTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKI 363
Query: 371 RNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWDPDSDMDVDDERVKRE 428
+ +L E L L HAP VQ Q P D+ +PE DED+ED D+R S D+R+ E
Sbjct: 364 KQRLFENLRMLPHAPGVQMQVIPEDA-IPEESGDEDEEDPDKRISICSS----DKRIACE 418
Query: 429 AVEPEQKDREGLKG 442
E D EG G
Sbjct: 419 E-EFSDSDEEGEGG 431
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 1552 (551.4 bits), Expect = 2.5e-159, P = 2.5e-159
Identities = 282/434 (64%), Positives = 346/434 (79%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIK-GHAECVKFMRSFNVPLLLLGGGG 310
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IK GHA+CV+F++SFN+P+L+LGGGG
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGG 303
Query: 311 YTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEI 370
YTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I
Sbjct: 304 YTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKI 363
Query: 371 RNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWDPDSDMDVDDERVKRE 428
+ +L E L L HAP VQ Q P D+ +PE DED+ED D+R S D+R+ E
Sbjct: 364 KQRLFENLRMLPHAPGVQMQVIPEDA-IPEESGDEDEEDPDKRISICSS----DKRIACE 418
Query: 429 AVEPEQKDREGLKG 442
E D EG G
Sbjct: 419 E-EFSDSDEEGEGG 431
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
Identities = 274/449 (61%), Positives = 349/449 (77%)
Query: 5 GNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKP 64
G + G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P
Sbjct: 92 GEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRP 151
Query: 65 FPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGG 124
A ++ ++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GG
Sbjct: 152 HKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG 211
Query: 125 SVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDID 184
SV GAVKLN D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DID
Sbjct: 212 SVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDID 271
Query: 185 IHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDES 244
IHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDES
Sbjct: 272 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDES 331
Query: 245 YHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLL 304
Y +FKPII KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL
Sbjct: 332 YGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLL 391
Query: 305 LLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSR 364
+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+
Sbjct: 392 MLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTP 451
Query: 365 QLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DD 422
+ +E+I+ +L E L L HAP VQ Q P D+ D EDG+ DPD + + D
Sbjct: 452 EYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASD 506
Query: 423 ERVK--REAVEPEQKDREGLKGMAEQARG 449
+R+ E + E + G + +A+ +G
Sbjct: 507 KRIACDEEFSDSEDEGEGGRRNVADHKKG 535
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
Identities = 274/449 (61%), Positives = 349/449 (77%)
Query: 5 GNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKP 64
G + G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P
Sbjct: 60 GEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRP 119
Query: 65 FPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGG 124
A ++ ++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GG
Sbjct: 120 HKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG 179
Query: 125 SVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDID 184
SV GAVKLN D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DID
Sbjct: 180 SVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDID 239
Query: 185 IHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDES 244
IHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDES
Sbjct: 240 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDES 299
Query: 245 YHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLL 304
Y +FKPII KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL
Sbjct: 300 YGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLL 359
Query: 305 LLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSR 364
+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+
Sbjct: 360 MLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTP 419
Query: 365 QLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DD 422
+ +E+I+ +L E L L HAP VQ Q P D+ D EDG+ DPD + + D
Sbjct: 420 EYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASD 474
Query: 423 ERVK--REAVEPEQKDREGLKGMAEQARG 449
+R+ E + E + G + +A+ +G
Sbjct: 475 KRIACDEEFSDSEDEGEGGRRNVADHKKG 503
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 1535 (545.4 bits), Expect = 1.6e-157, P = 1.6e-157
Identities = 273/440 (62%), Positives = 347/440 (78%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 187 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--REA 429
L E L L HAP VQ Q P D+ D EDG+ DPD + + D+R+ E
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASDKRIACDEEF 421
Query: 430 VEPEQKDREGLKGMAEQARG 449
+ E + G + +A+ +G
Sbjct: 422 SDSEDEGEGGRRNVADHKKG 441
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 1535 (545.4 bits), Expect = 1.6e-157, P = 1.6e-157
Identities = 273/440 (62%), Positives = 347/440 (78%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 187 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--REA 429
L E L L HAP VQ Q P D+ D EDG+ DPD + + D+R+ E
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASDKRIACDEEF 421
Query: 430 VEPEQKDREGLKGMAEQARG 449
+ E + G + +A+ +G
Sbjct: 422 SDSEDEGEGGRRNVADHKKG 441
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 1534 (545.1 bits), Expect = 2.1e-157, P = 2.1e-157
Identities = 271/426 (63%), Positives = 345/426 (80%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K++VCY+YD +VGNYYYGQGHPMKPHRIRMTH L+ +YGL + M++ +P A ++
Sbjct: 5 GTKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMT 64
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+DDYV FLR+I P+ + +Q++RFNVGEDCPVFDGL+ FCQ +GGSV GAVKLN
Sbjct: 65 KYHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLN 124
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
DIAINWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 125 KQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 184
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKPI+
Sbjct: 185 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIM 244
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P A+ LQCGADSLSGDRLGCFNL++KGHA+CV+FM+ +N+PLLL+GGGGYTI
Sbjct: 245 CKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTI 304
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET ALGVE+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + L++I+ +
Sbjct: 305 RNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTR 364
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPE 433
L E + + HAP VQ Q P D+ +P+ D D ED E D + D+R++R+ +
Sbjct: 365 LYENMRMIPHAPGVQMQPIPEDA-IPD-DSDAEDEAENPDKRISIMAQDKRIQRDDEFSD 422
Query: 434 QKDREG 439
+D EG
Sbjct: 423 SED-EG 427
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 1533 (544.7 bits), Expect = 2.6e-157, P = 2.6e-157
Identities = 273/440 (62%), Positives = 346/440 (78%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 187 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ ++FN+PLL+LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--REA 429
L E L L HAP VQ Q P D+ D EDG+ DPD + + D+R+ E
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASDKRIACDEEF 421
Query: 430 VEPEQKDREGLKGMAEQARG 449
+ E + G + +A+ +G
Sbjct: 422 SDSEDEGEGGRRNVADHKKG 441
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
Identities = 276/464 (59%), Positives = 353/464 (76%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K++VCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ +F
Sbjct: 6 KKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 65
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+D+YV FLRSI P+ + +Q++RFNVGEDCPVFDGL+ FCQ AGGSV AVKLN
Sbjct: 66 HSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQ 125
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
+I INW GGLHHAKK EASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGVEEAF
Sbjct: 126 ASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAF 185
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N+PL DG+DD++Y +F PII K
Sbjct: 186 YTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISK 245
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
VME F+P AVVLQCGADSL+GDRLGCFNL++KGH +CV+F++ +N+P L++GGGGYTIRN
Sbjct: 246 VMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRN 305
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
V+RCW YET VAL VE+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+N+L
Sbjct: 306 VSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLF 365
Query: 376 EYLSKLQHAPSVQFQERPPDSELPEAD-EDQEDGDERWDPDSDMD---VDDERVKREAVE 431
E L L HAP VQ Q P D+ E+D ED+ D D+R P SD D V + E
Sbjct: 366 ENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRL-PQSDKDKRIVPENEYSDSEDE 424
Query: 432 PE--QKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPI-DE 472
E ++D KG ++ R + D+ S K +S I DE
Sbjct: 425 GEGGRRDNRSYKGQRKRPR----LDKDTNSNKASSETSSEIKDE 464
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 279/433 (64%), Positives = 342/433 (78%)
Query: 15 VKRKVCYFYDP-EVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
V K+ FY +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 11 VSLKLPLFYSSGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 70
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVG--GAVK 131
++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ AGGSVG AVK
Sbjct: 71 KYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVGPASAVK 130
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 131 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 190
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 191 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 250
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 251 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 310
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 311 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 370
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWDPDSDMDVDDERVKREA 429
+L E L L HAP VQ Q P D+ +PE DED+ED D+R S D+R+ E
Sbjct: 371 QRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSS----DKRIACEE 425
Query: 430 VEPEQKDREGLKG 442
E D EG G
Sbjct: 426 -EFSDSDEEGEGG 437
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 1508 (535.9 bits), Expect = 1.2e-154, P = 1.2e-154
Identities = 269/439 (61%), Positives = 343/439 (78%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+K+K C F ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ +
Sbjct: 8 IKQKKCVFSSGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 67
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
+H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 68 YHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNR 127
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEA
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
Query: 195 FYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
FYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 188 FYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTIR
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307
Query: 315 NVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
NVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +L
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--REAV 430
E L L HAP VQ Q P D+ D EDG+ DPD + + D+R+ E
Sbjct: 368 FENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASDKRIACDEEFS 422
Query: 431 EPEQKDREGLKGMAEQARG 449
+ E + G + +A+ +G
Sbjct: 423 DSEDEGEGGRRNVADHKKG 441
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 1488 (528.9 bits), Expect = 1.5e-152, P = 1.5e-152
Identities = 268/440 (60%), Positives = 341/440 (77%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVS + FPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 187 AFYTTDRVMTVSEVSMVNNFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--REA 429
L E L L HAP VQ Q P D+ D EDG+ DPD + + D+R+ E
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASDKRIACDEEF 421
Query: 430 VEPEQKDREGLKGMAEQARG 449
+ E + G + +A+ +G
Sbjct: 422 SDSEDEGEGGRRNVADHKKG 441
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
Identities = 270/465 (58%), Positives = 348/465 (74%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
RKV YFYD EVGN+YYG HPMKPHR+RMTH L+ +YG+ + MQ+ +P A E +L FH
Sbjct: 4 RKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTNFH 63
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
+DDY++FL+ +TP+ D +QL +FNV EDCPVFDG+++FCQ +GGS+G AVK+N
Sbjct: 64 SDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNSKE 123
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
D+AINWAGGLHHAKK EASGFCY NDIVL+ILELLK HERVLY+DIDIHHGDGVEEAFY
Sbjct: 124 SDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEAFY 183
Query: 197 TTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKV 256
TTDRVMTVSFHK+GDYFPGTGD++DIG KGK+YSLN PL DGIDDESY +F+PII V
Sbjct: 184 TTDRVMTVSFHKYGDYFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSV 243
Query: 257 MEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNV 316
M+ +RPGAVV+QCGADSL+GDRLGCFNL+++GHA+C++F++SFNVPL++LGGGGYTI+NV
Sbjct: 244 MDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIKNV 303
Query: 317 ARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLE 376
ARCW YET + + E+ D++P ++Y EY+GP+Y LH+ P+NMEN+N++ LE+++ +LLE
Sbjct: 304 ARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLE 363
Query: 377 YLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKD 436
L L HAP+ + PPDS DED ED D R S+ D D++V + E D
Sbjct: 364 NLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVRI---SEAD-RDKKVHHQG-ELSDSD 418
Query: 437 REGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQEN 481
E G + G + A + + +S+ + PS N
Sbjct: 419 EED--GRRNYSNGLE--ATSTSRRNQVSISAYDKERPSYNSRNNN 459
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 1386 (493.0 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 246/425 (57%), Positives = 318/425 (74%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPD----SELPEADEDQEDGDERWD----PDSDMDVDDERVK 426
E L L HAPSVQ + P D EAD ++ +E + P+ D D + K
Sbjct: 363 FENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDK 422
Query: 427 REAVE 431
VE
Sbjct: 423 ESDVE 427
Score = 54 (24.1 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 390 QERPPDSEL--PEADEDQEDGDERWDPDSDMDV 420
+ER P+ PEA + DGD D +SD+++
Sbjct: 396 EERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 1386 (493.0 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 246/425 (57%), Positives = 318/425 (74%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPD----SELPEADEDQEDGDERWD----PDSDMDVDDERVK 426
E L L HAPSVQ + P D EAD ++ +E + P+ D D + K
Sbjct: 363 FENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDK 422
Query: 427 REAVE 431
VE
Sbjct: 423 ESDVE 427
Score = 54 (24.1 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 390 QERPPDSEL--PEADEDQEDGDERWDPDSDMDV 420
+ER P+ PEA + DGD D +SD+++
Sbjct: 396 EERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 1386 (493.0 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 246/425 (57%), Positives = 318/425 (74%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPD----SELPEADEDQEDGDERWD----PDSDMDVDDERVK 426
E L L HAPSVQ + P D EAD ++ +E + P+ D D + K
Sbjct: 363 FENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDK 422
Query: 427 REAVE 431
VE
Sbjct: 423 ESDVE 427
Score = 54 (24.1 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 390 QERPPDSEL--PEADEDQEDGDERWDPDSDMDV 420
+ER P+ PEA + DGD D +SD+++
Sbjct: 396 EERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 1386 (493.0 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 246/425 (57%), Positives = 318/425 (74%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPD----SELPEADEDQEDGDERWD----PDSDMDVDDERVK 426
E L L HAPSVQ + P D EAD ++ +E + P+ D D + K
Sbjct: 363 FENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDK 422
Query: 427 REAVE 431
VE
Sbjct: 423 ESDVE 427
Score = 54 (24.1 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 390 QERPPDSEL--PEADEDQEDGDERWDPDSDMDV 420
+ER P+ PEA + DGD D +SD+++
Sbjct: 396 EERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 1386 (493.0 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 246/425 (57%), Positives = 318/425 (74%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPD----SELPEADEDQEDGDERWD----PDSDMDVDDERVK 426
E L L HAPSVQ + P D EAD ++ +E + P+ D D + K
Sbjct: 363 FENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDK 422
Query: 427 REAVE 431
VE
Sbjct: 423 ESDVE 427
Score = 54 (24.1 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 390 QERPPDSEL--PEADEDQEDGDERWDPDSDMDV 420
+ER P+ PEA + DGD D +SD+++
Sbjct: 396 EERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
Identities = 255/416 (61%), Positives = 325/416 (78%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR 97
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 98 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASG 157
Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN D+A+NWAGGLHHAKK EASG
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120
Query: 158 FCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTG 217
FCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTG
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG 180
Query: 218 DIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGD 277
D+RDIG KGK+Y++N P+ DGIDDESY +FKPII KVME+++P AVVLQCGADSLSGD
Sbjct: 181 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 240
Query: 278 RLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMP 337
RLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTIRNVARCW YET VAL E+ +++P
Sbjct: 241 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 300
Query: 338 QHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSE 397
++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +L E L L HAP VQ Q P D+
Sbjct: 301 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV 360
Query: 398 LPEADEDQEDGDERWDPDSDMDV--DDERVK--REAVEPEQKDREGLKGMAEQARG 449
D EDG+ DPD + + D+R+ E + E + G + +A+ +G
Sbjct: 361 --HEDSGDEDGE---DPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKG 411
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
Identities = 255/416 (61%), Positives = 325/416 (78%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR 97
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 98 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASG 157
Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN D+A+NWAGGLHHAKK EASG
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120
Query: 158 FCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTG 217
FCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTG
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG 180
Query: 218 DIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGD 277
D+RDIG KGK+Y++N P+ DGIDDESY +FKPII KVME+++P AVVLQCGADSLSGD
Sbjct: 181 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 240
Query: 278 RLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMP 337
RLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTIRNVARCW YET VAL E+ +++P
Sbjct: 241 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 300
Query: 338 QHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSE 397
++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +L E L L HAP VQ Q P D+
Sbjct: 301 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV 360
Query: 398 LPEADEDQEDGDERWDPDSDMDV--DDERVK--REAVEPEQKDREGLKGMAEQARG 449
D EDG+ DPD + + D+R+ E + E + G + +A+ +G
Sbjct: 361 --HEDSGDEDGE---DPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKG 411
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 1409 (501.1 bits), Expect = 3.6e-144, P = 3.6e-144
Identities = 253/440 (57%), Positives = 329/440 (74%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKP+I
Sbjct: 187 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVI 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
K+ E+ P V L+ +GD+ F +KGHA+CV+ +++FN+PLL+LGGGGYTI
Sbjct: 247 TKIGEITFPTKVCLEIQPVHSAGDQFWVFVYCVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--REA 429
L E L L HAP VQ Q P D+ D EDG+ DPD + + D+R+ E
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASDKRIACDEEF 421
Query: 430 VEPEQKDREGLKGMAEQARG 449
+ E + G + + + +G
Sbjct: 422 SDSEDEGEGGRRNVTDHKKG 441
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 1381 (491.2 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 241/397 (60%), Positives = 309/397 (77%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDER 411
E L L HAPSVQ + P D L D+ D +ER
Sbjct: 363 FENLKMLNHAPSVQIHDVPADL-LTYDRTDEADAEER 398
Score = 42 (19.8 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 390 QERPPDSEL--PEADEDQEDGDERWDPDS 416
+ER P+ PEA + DGD D +S
Sbjct: 396 EERGPEENYSRPEAPNEFYDGDHDNDKES 424
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 242/398 (60%), Positives = 312/398 (78%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y+LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADE-DQEDGDER 411
E L L HAPSVQ + P S+L D D+ D +ER
Sbjct: 363 FENLKMLNHAPSVQIHDVP--SDLLSYDRTDEPDPEER 398
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 248/424 (58%), Positives = 318/424 (75%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
+ YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH+
Sbjct: 4 RTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHS 63
Query: 78 DDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLC 137
+DY+ FL+ ++P Q + L FNVG DCPVF GLF FC Y G S+ GA +LNH +C
Sbjct: 64 EDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKIC 123
Query: 138 DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYT 197
DIAINWAGGLHHAKK EASGFCYVNDIV++ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 124 DIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFYL 183
Query: 198 TDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKV 256
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY LF+P+I +V
Sbjct: 184 TDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQV 243
Query: 257 MEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNV 316
++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV+F++ F +PLL+LGGGGYT+RNV
Sbjct: 244 VDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRNV 303
Query: 317 ARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKLL 375
ARCW +ET + + + D++P EY+EYF PD+TLH S +EN+NSRQ LE+IR +
Sbjct: 304 ARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVF 363
Query: 376 EYLSKLQHAPSVQFQERPPDS---ELP-EADEDQEDGDERWD-PDSD---MDVDDERVKR 427
E L L HAPSVQ ++ P D E P EAD ++ +E + P++ D D + K
Sbjct: 364 ENLKMLNHAPSVQIRDVPSDLLSYERPDEADPEERGSEENFSRPEAANEFYDGDHDHDKE 423
Query: 428 EAVE 431
VE
Sbjct: 424 SDVE 427
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
Identities = 256/441 (58%), Positives = 329/441 (74%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
KR+V Y+YD +GNYYYGQGH MKPHRIRMTH L+ +YGL +N+++ +PFPA D+ RF
Sbjct: 12 KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+D+Y++FL+S P+ + +Q+ +FNVGEDCP+FDGL+ FCQ +GGS+ A KLN
Sbjct: 72 HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
DIAINW GGLHHAKK EASGFCY NDIVL ILELLK H+RVLYVDID+HHGDGVEEAF
Sbjct: 132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMTVSFHK+GD+FPGTGD++DIG KGK YS+NVPL DGI D SY +FKPI+ K
Sbjct: 192 YTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTK 251
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
VME F P AVVLQCGADSL+GDRLG FNL++KGH EC +F RS+NVPL+++GGGGYT RN
Sbjct: 252 VMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRN 311
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
VARCW YET +A+ EV +++P ++Y+EYFGP+Y LH+ SN N+NS +L +++ ++
Sbjct: 312 VARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVI 371
Query: 376 EYLSKLQHAPSVQFQERPPDSELPEADE----DQEDGDERWDPD-SDMDVDDERVKREAV 430
L +L PSVQ + P D+ D+ DQ + D+R P +D + D+ +
Sbjct: 372 ANLEQLTFVPSVQMRPIPEDALSALNDDSLIADQANPDKRLPPQITDGMIQDDGDFYDG- 430
Query: 431 EPEQKDREGLKGMAEQARGFD 451
E E DR + A++A F+
Sbjct: 431 EREGDDRRN-ESDAKRAAQFE 450
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
Identities = 256/441 (58%), Positives = 329/441 (74%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
KR+V Y+YD +GNYYYGQGH MKPHRIRMTH L+ +YGL +N+++ +PFPA D+ RF
Sbjct: 12 KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+D+Y++FL+S P+ + +Q+ +FNVGEDCP+FDGL+ FCQ +GGS+ A KLN
Sbjct: 72 HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
DIAINW GGLHHAKK EASGFCY NDIVL ILELLK H+RVLYVDID+HHGDGVEEAF
Sbjct: 132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMTVSFHK+GD+FPGTGD++DIG KGK YS+NVPL DGI D SY +FKPI+ K
Sbjct: 192 YTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTK 251
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
VME F P AVVLQCGADSL+GDRLG FNL++KGH EC +F RS+NVPL+++GGGGYT RN
Sbjct: 252 VMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRN 311
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
VARCW YET +A+ EV +++P ++Y+EYFGP+Y LH+ SN N+NS +L +++ ++
Sbjct: 312 VARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVI 371
Query: 376 EYLSKLQHAPSVQFQERPPDSELPEADE----DQEDGDERWDPD-SDMDVDDERVKREAV 430
L +L PSVQ + P D+ D+ DQ + D+R P +D + D+ +
Sbjct: 372 ANLEQLTFVPSVQMRPIPEDALSALNDDSLIADQANPDKRLPPQITDGMIQDDGDFYDG- 430
Query: 431 EPEQKDREGLKGMAEQARGFD 451
E E DR + A++A F+
Sbjct: 431 EREGDDRRN-ESDAKRAAQFE 450
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
Identities = 242/398 (60%), Positives = 311/398 (78%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 SEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADE-DQEDGDER 411
E L L HAPSVQ + P S+L D D+ D +ER
Sbjct: 363 FENLKMLNHAPSVQIHDVP--SDLLSYDRTDEPDPEER 398
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 1381 (491.2 bits), Expect = 3.4e-141, P = 3.4e-141
Identities = 245/412 (59%), Positives = 319/412 (77%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K K+ YFYD +VG+ Y+G HPMKPHR+ MTH L+ YGL M+V +P A ++ +F
Sbjct: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+ DYV FL+ I PE Q ++ R+N+GEDCPVF+ LF FCQ YAGG++ A +LN+
Sbjct: 64 HSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNK 123
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
LCDIAINWAGGLHHAKKC+ASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 124 LCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAF 183
Query: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y TDRVMTVSFHKFGD +FPGTGD+++IG +GKFY++NVPL DGIDD S++ LF+ II
Sbjct: 184 YFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIIS 243
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
KV+E+++PGA+VLQCGADSL+ DRLGCFNLSI GHAECVKF++ FN+PLL+ GGGGYT
Sbjct: 244 KVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKE 303
Query: 315 NVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
NVARCW ETG+ L E+ +++P+++Y +YF PD++L + ++EN N++ + I+ ++
Sbjct: 304 NVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQI 363
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP---DSDMDVDDE 423
LE L +QHAPSVQ QE PPD +P+ DED+++ D R D D + DDE
Sbjct: 364 LENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDE 415
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 117/224 (52%), Positives = 165/224 (73%)
Query: 212 YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGA 271
+FPGTGD+++IG +GKFY++NVPL DGIDD S++ LF+ II KV+E+++PGA+VLQCGA
Sbjct: 201 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGA 260
Query: 272 DSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVE 331
DSL+ DRLGCFNLSI GHAECVKF++ FN+PLL+ GGGGYT NVARCW ETG+ L E
Sbjct: 261 DSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 320
Query: 332 VDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQE 391
+ +++P+++Y +YF PD++L + ++EN N++ + I+ ++LE L +QHAPSVQ QE
Sbjct: 321 LPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQE 380
Query: 392 RPPDSELPEADEDQED----------------GDERWDPDSDMD 419
PPD +P+ DED+++ DE +D D+D D
Sbjct: 381 VPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDEYFDGDNDND 424
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 247/468 (52%), Positives = 340/468 (72%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K+++ YFYD ++GNY YG GHPMKPHRIRM H+L+ +YGL + M++ + PA ++++C+F
Sbjct: 17 KKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 76
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H D+Y+ F+ + P+ ++ +FNVG+DCPVFDGLF +C GGS+ GA +LN G
Sbjct: 77 HTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRG 136
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
CDIAIN+AGGLHHAKK EASGFCY+NDIVL I+ELL+ H RVLY+DID+HHGDGVEEAF
Sbjct: 137 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 196
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMT SFHK+G++FPGTG++RDIG KGK++S+NVPL DGIDD +Y +F+P+I K
Sbjct: 197 YTTDRVMTCSFHKYGEFFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISK 256
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
++E ++P A+VLQCG DSLSGDRLGCFNLS+ GHA C+ +++SFN+P++++GGGGYT+RN
Sbjct: 257 IIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRN 316
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
VAR W YE+G+ V++ D++P +EYYEY+GPDY L V SNM N+NS + L++I ++
Sbjct: 317 VARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNII 376
Query: 376 EYLSKLQHAPSVQFQERPPDSE-LPEADEDQEDGDERWDPDSDMDVDDE-RVKREAVEPE 433
L +HAPSVQ E P D E L + +ED + S+M D + + E E +
Sbjct: 377 ANLENTKHAPSVQMNEVPNDPEDLGDVEEDTAMAIDT-KGGSEMSRDAQIQPDNEFYEDD 435
Query: 434 QKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQEN 481
+KD+ G K + + +D S +V D S P+ E K + EN
Sbjct: 436 EKDK-GEKAIIDNKH------EDQDSMQV-DKSEEPVVEQKDKPQDEN 475
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 247/468 (52%), Positives = 340/468 (72%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K+++ YFYD ++GNY YG GHPMKPHRIRM H+L+ +YGL + M++ + PA ++++C+F
Sbjct: 17 KKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 76
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H D+Y+ F+ + P+ ++ +FNVG+DCPVFDGLF +C GGS+ GA +LN G
Sbjct: 77 HTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRG 136
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
CDIAIN+AGGLHHAKK EASGFCY+NDIVL I+ELL+ H RVLY+DID+HHGDGVEEAF
Sbjct: 137 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 196
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMT SFHK+G++FPGTG++RDIG KGK++S+NVPL DGIDD +Y +F+P+I K
Sbjct: 197 YTTDRVMTCSFHKYGEFFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISK 256
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
++E ++P A+VLQCG DSLSGDRLGCFNLS+ GHA C+ +++SFN+P++++GGGGYT+RN
Sbjct: 257 IIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRN 316
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
VAR W YE+G+ V++ D++P +EYYEY+GPDY L V SNM N+NS + L++I ++
Sbjct: 317 VARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNII 376
Query: 376 EYLSKLQHAPSVQFQERPPDSE-LPEADEDQEDGDERWDPDSDMDVDDE-RVKREAVEPE 433
L +HAPSVQ E P D E L + +ED + S+M D + + E E +
Sbjct: 377 ANLENTKHAPSVQMNEVPNDPEDLGDVEEDTAMAIDT-KGGSEMSRDAQIQPDNEFYEDD 435
Query: 434 QKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQEN 481
+KD+ G K + + +D S +V D S P+ E K + EN
Sbjct: 436 EKDK-GEKAIIDNKH------EDQDSMQV-DKSEEPVVEQKDKPQDEN 475
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 1359 (483.5 bits), Expect = 7.2e-139, P = 7.2e-139
Identities = 250/482 (51%), Positives = 336/482 (69%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
++V YFYD +VGNY Y GHPMKPHRIRMTH+L+ +Y L + M++ + PA + ++ +FH
Sbjct: 26 KRVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPASKFEMTQFH 85
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
D+Y+ FL +TP+ ++ ++NVG+DCPVFDGLF FC AGGS+ GA +LN
Sbjct: 86 TDEYIDFLSKVTPDNMDAFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNK 145
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIA+NWAGGLHHAKK EASGFCYVNDIVL ILELL+ +RVLYVDID+HHGDGVEEAFY
Sbjct: 146 CDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFY 205
Query: 197 TTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKV 256
TTDRVMTVSFHK+G+YFPGTG++RDIG +GK+Y++N PL DGIDD SY +F+P+I V
Sbjct: 206 TTDRVMTVSFHKYGEYFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIKSV 265
Query: 257 MEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNV 316
ME +RP AVVLQCG DSLSGDRLGCFNLS++GHA CVK+++SFN+P L++GGGGYT+RNV
Sbjct: 266 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLIVGGGGYTMRNV 325
Query: 317 ARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLE 376
AR W +ETG+ +G + ++P ++YYEYF PDY L V PSNM+N N+R+ L++IR +++E
Sbjct: 326 ARTWAFETGILVGDNLGSELPYNDYYEYFAPDYELDVRPSNMDNANTREYLDKIRTQVVE 385
Query: 377 YLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVD------DERVKR--E 428
L + APSVQ + P + + D++ E + D D + D D+ V++ E
Sbjct: 386 NLKRTAFAPSVQMTDVPREPLVDGMDDEAEAALDDLDEDENKDKRFTKRRFDQYVEKPGE 445
Query: 429 AVEPEQKDREGLKGMAEQARGFDMIADDSISTKVLDM---SSMPIDEPSIKVEQENMSKA 485
+ E +D G+ + + + D S M + + V E M
Sbjct: 446 LSDSEDEDENAANGVTRKPAHLKRRNQANYRLDLADSGVESGMATPQDASSVADEEMDTG 505
Query: 486 SD 487
+D
Sbjct: 506 TD 507
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 1352 (481.0 bits), Expect = 4.0e-138, P = 4.0e-138
Identities = 234/414 (56%), Positives = 316/414 (76%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
KR+V YFYD +VGNY YG GHPMKPHRIRM H+L+ +YGL + M++ + PA ++++C+F
Sbjct: 18 KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H D+Y+ FL +TP+ + R+ +FNVG+DCPVFDGL+ +C GGS+ GA +LN G
Sbjct: 78 HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
CD+A+N+AGGLHHAKK EASGFCY+NDIVL I+ELL+ H RVLY+DID+HHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMT SFHK+G++FPGTG++RDIG GK Y++NVPL DGIDD +Y +F+P+I K
Sbjct: 198 YTTDRVMTCSFHKYGEFFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKK 257
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
+ME ++P AVVLQCG DSLSGDRLGCFNLS++GHA CV +++SF +P++++GGGGYT+RN
Sbjct: 258 IMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRN 317
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
VAR WC+ETG+ V +D +P +EYYEY+GPDY L V PSNM N N+ + L+++ +
Sbjct: 318 VARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNIF 377
Query: 376 EYLSKLQHAPSVQFQERPPDSE-LPEADEDQED-----GDERWDPDSDMDVDDE 423
L ++APSVQ P D+E L + +ED + G ++ D ++ D+E
Sbjct: 378 ANLENTKYAPSVQLNHTPRDAEDLGDVEEDSAEAKDTKGGSQYARDLHVEHDNE 431
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 1317 (468.7 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 235/413 (56%), Positives = 310/413 (75%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
R+V YFY+ +VGN++YG GHPMKP R+ +TH+L+ +YGL + M++ +P+ A +D+ RFH
Sbjct: 4 RRVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFH 63
Query: 77 ADDYVSFLRSITPETQQDQ----LRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL 132
+D+Y+++L+ +TP+ Q + L F+VGEDCPVFDGLF FC Y G S+ GA KL
Sbjct: 64 SDEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKL 123
Query: 133 NHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVE 192
NH DI INW+GGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DID+HHGDGV+
Sbjct: 124 NHNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQ 183
Query: 193 EAFYTTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EAFY TDRVMT SFHK+G+YF PGTGD+ +IG G++YS+NVPL +GIDD+SY +FKP
Sbjct: 184 EAFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
II +M+ +RP A+VLQCGADSL+GDRLGCF+LS KGH ECVKF++ NVP L++GGGGY
Sbjct: 244 IISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVA-PSNMENKNSRQLLEEI 370
T+RNVARCW +ET + + ++++ +P EYY++F PD+TLH S +N NS+Q LE I
Sbjct: 304 TLRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELI 363
Query: 371 RNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDE 423
+ E L QH+PSVQ + PPD +L E ++E+ DPD + V DE
Sbjct: 364 VKHVYENLKMCQHSPSVQMVQTPPDVDLEELRSNREEAS---DPDVRISVADE 413
Score = 50 (22.7 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 381 LQHAPSVQFQERPPDSELPEADEDQ--EDGDERWDPDSDMDVDD 422
L+ S + + PD + ADED+ + +E +D D D D D
Sbjct: 391 LEELRSNREEASDPDVRISVADEDKLVDAKNEFYDGDQDQDKPD 434
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 1345 (478.5 bits), Expect = 2.2e-137, P = 2.2e-137
Identities = 245/434 (56%), Positives = 321/434 (73%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K +V Y+YD + GN+YYGQGHPMKPHR+RMTH+L+ +YGL + + V++P A ++ R+
Sbjct: 7 KSRVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITRY 66
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+DDY++FLR++ + Q+ RF+VGEDCPVFDG++ FCQ GGS+ A +LN
Sbjct: 67 HSDDYINFLRNVKSDNMSTFTDQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNRQ 126
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
+IAINW GGLHHAKK EASGFCY NDIVLAILELLK H+RVLY+DID+HHGDGVEEAF
Sbjct: 127 ESEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHKRVLYIDIDVHHGDGVEEAF 186
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMTVSFHK G+YFPGTGD++D+G GK+Y+LNVPL DG+DD +Y +F+ I+G+
Sbjct: 187 YTTDRVMTVSFHKHGEYFPGTGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIMGE 246
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
VM F+P AVVLQCGADSL+GDRLG FNL+ GH +CV++M+SFNVPLLL+GGGGYTIRN
Sbjct: 247 VMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTIRN 306
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAP-SNMENKNSRQLLEEIRNKL 374
V+RCW YET +AL EV D +P H+Y++YF PDY LH+ P + + N N+ + +++ L
Sbjct: 307 VSRCWLYETAIALNQEVSDDLPLHDYFDYFIPDYKLHIKPLAALSNFNTPEFIDQTIVAL 366
Query: 375 LEYLSKLQHAPSVQFQERPP--DSELPEADE----DQEDGDERWDP-DSDMDVDDERVKR 427
LE L +L H PSVQ Q DS + DE D ++ D R + D+ V+D
Sbjct: 367 LENLKQLPHVPSVQMQSISTSCDSIVKTFDEKLIRDHQNDDVRVTQFEEDVQVEDSAEFY 426
Query: 428 EAVEPEQKDREGLK 441
+ EPE K+ + +K
Sbjct: 427 DGQEPETKNIQSMK 440
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
Identities = 242/401 (60%), Positives = 304/401 (75%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K+KV YFYD +VGNY+YG HPMKPHR+RM H L+ +Y L + + V+ P A D+ R
Sbjct: 5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64
Query: 76 HADDYVSFLRSITPETQQD-QLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
H D+Y+ FL +TP+T + Q QLK FNVG+DCPVFDGL+ FC AGGS+G A +LN
Sbjct: 65 HTDEYIEFLWRVTPDTMEKFQPHQLK-FNVGDDCPVFDGLYEFCSISAGGSIGAAQELNS 123
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
G +IAINWAGGLHHAKK EASGFCYVNDI LA LELLK H+RVLY+DID+HHGDGVEE
Sbjct: 124 GNAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEF 183
Query: 195 FYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
FYTTDRVMT SFHKFG+YFPGTG I+D G GK Y++NVPL DGIDDESY +FKP+I
Sbjct: 184 FYTTDRVMTCSFHKFGEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVIS 243
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
+M+ FRP AV+LQCG DSL+GDRLGCFNLS+KGH+ CV F++SFN+P++ +GGGGYT+R
Sbjct: 244 HIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVR 303
Query: 315 NVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
NVAR W YETG+ G E+D+ +P ++Y +Y+GPDY L+V +NMEN N+RQ L+ I +++
Sbjct: 304 NVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEI 363
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADED----QEDGDER 411
+E L L APSVQ + P D A++ +E DER
Sbjct: 364 IENLRNLSFAPSVQMHKTPGDFTFENAEKQNIAKEEIMDER 404
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
Identities = 244/413 (59%), Positives = 315/413 (76%)
Query: 6 NSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPF 65
N++ + T K +VCYF+D +VGNY+YG HPMKPHR+ +T+ L+ +YGL + M + K
Sbjct: 4 NTILNNTS--KTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKAR 61
Query: 66 PARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGS 125
PA D+ +FH++DYV FL +TPE ++ + +KRF++GEDCPVF GL+ +C Y+GGS
Sbjct: 62 PADAEDMLKFHSEDYVDFLERVTPENI-NEWKDVKRFHIGEDCPVFPGLYDYCSIYSGGS 120
Query: 126 VGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDI 185
+ GA+KLNH + DIAINW+GGLHHA+K EASGFCYVNDIVLAILELLK H RVLY+DID+
Sbjct: 121 IEGALKLNHRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDV 180
Query: 186 HHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDES 244
HHGDGV+EAFY TDRVMTVSFHKFG D+FPGTGDI +IG GK YS+NVPL DGIDD++
Sbjct: 181 HHGDGVQEAFYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKN 240
Query: 245 YHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLL 304
Y +FKP+I VM+ +RP +VLQCGADSL DRLGCFNL+IKGHAECV+F++SFN+P L
Sbjct: 241 YLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTL 300
Query: 305 LLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTL---HVA-PSNMEN 360
+LGGGGYT+RNVARCW YET V + EV++++P ++Y +++ PD+ L + P EN
Sbjct: 301 VLGGGGYTVRNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQLIPDYTGLPFKYEN 360
Query: 361 KNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWD 413
N++ LE +R K+LE L LQ APSVQ Q+ PPD + D D ED E D
Sbjct: 361 ANTKSYLESLRIKILENLRILQWAPSVQIQDVPPDIMPIDFDRD-EDSKENMD 412
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 1258 (447.9 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 232/425 (54%), Positives = 300/425 (70%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V P ++ LC H
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVKTPSRNKQEKLCPVH 62
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
+ F P++ + G + PVF GLF FC Y G S+ GA +LN+ +
Sbjct: 63 GVPLIWFSTRFGPKSLLNGSVSGSGVEEGREFPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 197 TTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RN
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKL 374
VARCW YET + + + +++P EY+EYF PD+TLH S +EN+NSRQ L++IR +
Sbjct: 303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362
Query: 375 LEYLSKLQHAPSVQFQERPPD----SELPEADEDQEDGDERWD----PDSDMDVDDERVK 426
E L L HAPSVQ + P D EAD ++ +E + P+ D D + K
Sbjct: 363 FENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDK 422
Query: 427 REAVE 431
VE
Sbjct: 423 ESDVE 427
Score = 54 (24.1 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 390 QERPPDSEL--PEADEDQEDGDERWDPDSDMDV 420
+ER P+ PEA + DGD D +SD+++
Sbjct: 396 EERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 1279 (455.3 bits), Expect = 2.2e-130, P = 2.2e-130
Identities = 238/436 (54%), Positives = 310/436 (71%)
Query: 13 DGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDL 72
D KR+V YFYD +VGNY+YG GH MKPHRIRM H+L+ +Y L + M++ + PA +L
Sbjct: 13 DPRKRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLEL 72
Query: 73 CRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL 132
+FH D+Y+ F+ +TP+ R+ FNVG+DCPVFDGL FC+ GGS+ GA +L
Sbjct: 73 TQFHTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARL 132
Query: 133 NHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVE 192
N G DIAIN+AGGLHHAKK EASGFCY NDIVL I+ELL+ H RVLY+D D+HHGDGVE
Sbjct: 133 NRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVE 192
Query: 193 EAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPI 252
EAFYT DRVMT SFHKFG++FPGTG++ DIG KGK++++N+PL DGIDD SY +F+PI
Sbjct: 193 EAFYTNDRVMTCSFHKFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPI 252
Query: 253 IGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYT 312
I K+ME ++P A+VLQCG DSLSGDRLG FNLS++GHA CV F+RS VP+++LGGGGYT
Sbjct: 253 ITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLGGGGYT 312
Query: 313 IRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
IRNVAR W +ETGV G + ++P + YYEY+ P Y L V +NM N NS++ L++I
Sbjct: 313 IRNVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKILT 372
Query: 373 KLLEYLSKLQHAPSVQFQERPPDSE-LPEADEDQEDGDERWDPDSDMDVDDERVKR--EA 429
+++ L +H PSVQ E P D E L + DED D + D+ V+ E
Sbjct: 373 QVISNLDNTKHTPSVQMNEVPLDMEDLGDVDEDMPDAIDT--KGGSQFAKDKLVQADGEF 430
Query: 430 VEPEQKDREGLKGMAE 445
+ ++KD+ G K + E
Sbjct: 431 YDDDEKDK-GEKNIQE 445
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 1279 (455.3 bits), Expect = 2.2e-130, P = 2.2e-130
Identities = 238/436 (54%), Positives = 310/436 (71%)
Query: 13 DGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDL 72
D KR+V YFYD +VGNY+YG GH MKPHRIRM H+L+ +Y L + M++ + PA +L
Sbjct: 13 DPRKRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLEL 72
Query: 73 CRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL 132
+FH D+Y+ F+ +TP+ R+ FNVG+DCPVFDGL FC+ GGS+ GA +L
Sbjct: 73 TQFHTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARL 132
Query: 133 NHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVE 192
N G DIAIN+AGGLHHAKK EASGFCY NDIVL I+ELL+ H RVLY+D D+HHGDGVE
Sbjct: 133 NRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVE 192
Query: 193 EAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPI 252
EAFYT DRVMT SFHKFG++FPGTG++ DIG KGK++++N+PL DGIDD SY +F+PI
Sbjct: 193 EAFYTNDRVMTCSFHKFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPI 252
Query: 253 IGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYT 312
I K+ME ++P A+VLQCG DSLSGDRLG FNLS++GHA CV F+RS VP+++LGGGGYT
Sbjct: 253 ITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLGGGGYT 312
Query: 313 IRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
IRNVAR W +ETGV G + ++P + YYEY+ P Y L V +NM N NS++ L++I
Sbjct: 313 IRNVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKILT 372
Query: 373 KLLEYLSKLQHAPSVQFQERPPDSE-LPEADEDQEDGDERWDPDSDMDVDDERVKR--EA 429
+++ L +H PSVQ E P D E L + DED D + D+ V+ E
Sbjct: 373 QVISNLDNTKHTPSVQMNEVPLDMEDLGDVDEDMPDAIDT--KGGSQFAKDKLVQADGEF 430
Query: 430 VEPEQKDREGLKGMAE 445
+ ++KD+ G K + E
Sbjct: 431 YDDDEKDK-GEKNIQE 445
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
Identities = 235/393 (59%), Positives = 295/393 (75%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y+YD + GNY YGQGHP+KPH+IRMTH L YGL + M++ +P A ++ ++H+DDY
Sbjct: 1 YYYDGDAGNYNYGQGHPVKPHQIRMTHNLPLSYGLYRKMEIYRPHKANAEEMTKYHSDDY 60
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA 140
+ FLR I P++ + ++Q++RFNVG+DCPVF+GL FCQ GGSV AVKLN DIA
Sbjct: 61 IKFLRFIRPDSMSEYIKQMQRFNVGQDCPVFNGLSEFCQLSTGGSVASAVKLNKQQTDIA 120
Query: 141 INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDR 200
+NWAG LHHAK EASGFCYVNDIVLAILELLK +RVL +DID HHGDG EEAFYT D
Sbjct: 121 VNWAGDLHHAKNSEASGFCYVNDIVLAILELLKYLQRVLCMDIDTHHGDGTEEAFYTADW 180
Query: 201 VMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVF 260
VMTVSFH F P TGD+RDIG KGK+Y++N PL D IDDES +FKP++ KVME
Sbjct: 181 VMTVSFHNF----PVTGDLRDIGAGKGKYYAINYPLRDCIDDESCEAIFKPVMSKVME-- 234
Query: 261 RPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCW 320
P AVVLQCG+DSLSGD LG FNL+IKGH +CV F++SFN+P+L+L GGGYTI NVARCW
Sbjct: 235 -PSAVVLQCGSDSLSGDWLGSFNLTIKGH-KCVGFVKSFNLPMLMLRGGGYTIHNVARCW 292
Query: 321 CYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSK 380
YET V L E+ +++P ++Y+EYFGPD+ LH++PSN N+N+ + LE I+ +L E L
Sbjct: 293 TYETAVTLDTEIPNELPYNDYFEYFGPDFKLHISPSNTTNQNTNEYLE-IKQRLFENLRM 351
Query: 381 LQHAPSVQFQERPPDSELPE--ADEDQEDGDER 411
L H P VQ Q P D+ +PE DED+ED D+R
Sbjct: 352 LPHVPEVQMQAIPEDA-IPEESGDEDEEDPDKR 383
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 233/344 (67%), Positives = 278/344 (80%)
Query: 103 NVGEDCPVFDGLFSFCQTYAGGSVG--GAVKLNHGLCDIAINWAGGLHHAKKCEASGFCY 160
NVGEDCPVFDGLF FCQ AGGSVG AVKLN DIA+NWAGGLHHAKK EASGFCY
Sbjct: 3 NVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCY 62
Query: 161 VNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIR 220
VNDIVLAILELLK H+RVLY+DIDIHHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+R
Sbjct: 63 VNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLR 122
Query: 221 DIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLG 280
DIG KGK+Y++N PL DGIDDESY +FKP++ KVME+F+P AVVLQCG+DSLSGDRLG
Sbjct: 123 DIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 182
Query: 281 CFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHE 340
CFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++
Sbjct: 183 CFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYND 242
Query: 341 YYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE 400
Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P D+ +PE
Sbjct: 243 YFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IPE 301
Query: 401 --ADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDREGLKG 442
DED+ED D+R S D+R+ E E D EG G
Sbjct: 302 ESGDEDEEDPDKRISICSS----DKRIACEE-EFSDSDEEGEGG 340
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 228/413 (55%), Positives = 292/413 (70%)
Query: 8 LPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPA 67
+ S DG KR+V YFY+P +G+YYYG P KP RIR+TH L+ Y L ++M++ P A
Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLA 60
Query: 68 RERDLCRFHADDYVSFLRSITPETQQDQ----LRQLKRFNVGEDC--PVFDGLFSFCQTY 121
D +FH+ +Y++FL+S+TPET D LKRFNV D PVF LF +C+ Y
Sbjct: 61 DASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAY 120
Query: 122 AGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYV 181
AGGS+ A KLN DIAINWAGG+HH KK +ASGF YVND+VLAILELLK +RVLY+
Sbjct: 121 AGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYI 180
Query: 182 DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID 241
+I HGD VEEAF TDRVMTVSFHK GD TGDI D G KG++YSLN PL DG+D
Sbjct: 181 EIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLD 236
Query: 242 DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNV 301
D S LF P+I + ME++ P +VLQCGADSL+GD G FNLSIKGH +C++++RSFNV
Sbjct: 237 DFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNV 296
Query: 302 PLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENK 361
PL++LGGGGYT+ NVARCWCYET +A+G ++D+ +P ++Y +YF PDY LH+ P+N +N
Sbjct: 297 PLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNL 356
Query: 362 NSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP 414
N+R + +R LL LS + HAPSV FQ+ P S+ EA E D ++R DP
Sbjct: 357 NTRLDIITMRETLLAQLSLVMHAPSVPFQDTPSSSQATEAAE--VDMEKRNDP 407
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 1180 (420.4 bits), Expect = 6.7e-120, P = 6.7e-120
Identities = 220/408 (53%), Positives = 288/408 (70%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K++V Y D +VGNY+YG HPMKPHRI +T+ L+ YGL M V P A ++ F
Sbjct: 25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEF 84
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H +DY+ FL+ +TP+ + + ++FN+G+DCPVFDG + F Q AG S+ + KL G
Sbjct: 85 HREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQG 144
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
DIAINW+GGLHHAK+ EASGFCYVNDIVLAIL +L+ RVLY+DIDIHHGDGV++AF
Sbjct: 145 QTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAF 204
Query: 196 YTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y +DRV+TVSFHK+ GD+FP TG+ + G GK+++LNVPL+DGI DE Y LFK II
Sbjct: 205 YESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIE 264
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
+ F+P A+VLQCGADSL DRLG FNLSI H ECV+F RSFN+P+L++GGGGYT+R
Sbjct: 265 PTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLR 324
Query: 315 NVARCWCYETGVALGVEVDDKMPQHE-YYEYFGPDYTLHVA-PSNMENKNSRQLLEEIRN 372
NVAR WCYET + + ++ ++P+ YYE+F PDYTLH + +ENKN+ + LE++R
Sbjct: 325 NVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTLHPRLTTKIENKNTPKALEDLRI 384
Query: 373 KLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV 420
+ LE L L APSVQ Q+ PPD +ED+ DE D D+ V
Sbjct: 385 RALEQLRYLGGAPSVQMQQIPPDLTGHLEEEDERLNDEYLDKAVDVRV 432
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
Identities = 218/422 (51%), Positives = 298/422 (70%)
Query: 11 GTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARER 70
GT+ K V Y Y+PEV ++YG HPMKP R+ +T L+ Y L + M + P A +
Sbjct: 30 GTNN-KYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKD 88
Query: 71 DLCRFHADDYVSFLRSITPETQQDQLRQ-LKRFNVGEDCPVFDGLFSFCQTYAGGSVGGA 129
+L FH++DY+ FL+SITPE + L +FN+G+DCP+FDG++ + YAG S+
Sbjct: 89 ELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDAT 148
Query: 130 VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGD 189
KL G+ DIAINW+GGLHHAKK E SGFCYVNDIVL+I+ LL+ H RV+Y+DID+HHGD
Sbjct: 149 RKLISGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGD 208
Query: 190 GVEEAFYTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 248
GV+EAFY TDRVMTVSFHK+ G++FPGTG + ++G GK Y++NVPL DGIDDESY L
Sbjct: 209 GVQEAFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRL 268
Query: 249 FKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG 308
FK I+ ++ F+P +V QCGADSL DRLGCFNL+I+ H ECVKF++SF +P+L++GG
Sbjct: 269 FKSIMEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGG 328
Query: 309 GGYTIRNVARCWCYETGVALGVEVDDKMPQH-EYYEYFGPDYTLHVA-PSNMENKNSRQL 366
GGYT RNV+R WCYET V V +D K+P + Y++FGPDY+LH ++NKNS++
Sbjct: 329 GGYTPRNVSRLWCYETSVLNDVNLDHKIPNYLPTYDWFGPDYSLHPQLDGRIDNKNSKKY 388
Query: 367 LEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVK 426
L+ ++ ++E + L HAPSVQ E PPD L ED++ + + + DM+ D++ +K
Sbjct: 389 LQSVQTTIMEQIRYLNHAPSVQMYEIPPD--LTGLTEDEDKAIQ--ELNEDMERDEKIMK 444
Query: 427 RE 428
E
Sbjct: 445 DE 446
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
Identities = 218/422 (51%), Positives = 298/422 (70%)
Query: 11 GTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARER 70
GT+ K V Y Y+PEV ++YG HPMKP R+ +T L+ Y L + M + P A +
Sbjct: 30 GTNN-KYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKD 88
Query: 71 DLCRFHADDYVSFLRSITPETQQDQLRQ-LKRFNVGEDCPVFDGLFSFCQTYAGGSVGGA 129
+L FH++DY+ FL+SITPE + L +FN+G+DCP+FDG++ + YAG S+
Sbjct: 89 ELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDAT 148
Query: 130 VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGD 189
KL G+ DIAINW+GGLHHAKK E SGFCYVNDIVL+I+ LL+ H RV+Y+DID+HHGD
Sbjct: 149 RKLISGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGD 208
Query: 190 GVEEAFYTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 248
GV+EAFY TDRVMTVSFHK+ G++FPGTG + ++G GK Y++NVPL DGIDDESY L
Sbjct: 209 GVQEAFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRL 268
Query: 249 FKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG 308
FK I+ ++ F+P +V QCGADSL DRLGCFNL+I+ H ECVKF++SF +P+L++GG
Sbjct: 269 FKSIMEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGG 328
Query: 309 GGYTIRNVARCWCYETGVALGVEVDDKMPQH-EYYEYFGPDYTLHVA-PSNMENKNSRQL 366
GGYT RNV+R WCYET V V +D K+P + Y++FGPDY+LH ++NKNS++
Sbjct: 329 GGYTPRNVSRLWCYETSVLNDVNLDHKIPNYLPTYDWFGPDYSLHPQLDGRIDNKNSKKY 388
Query: 367 LEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVK 426
L+ ++ ++E + L HAPSVQ E PPD L ED++ + + + DM+ D++ +K
Sbjct: 389 LQSVQTTIMEQIRYLNHAPSVQMYEIPPD--LTGLTEDEDKAIQ--ELNEDMERDEKIMK 444
Query: 427 RE 428
E
Sbjct: 445 DE 446
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 205/418 (49%), Positives = 294/418 (70%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
+V Y ++ +V +Y+YG HPMKP R+ +T L++ YGL + M + + A +L +FH+
Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86
Query: 78 DDYVSFLRSITPETQQDQLR-QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
+DYV+FL ++PE R L+ FN+G+DCP+F L+ + Y G S+ KL +
Sbjct: 87 EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
DIAINW+GGLHHAKK SGFCYVNDIVL+IL LL+ H R+LY+DID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206
Query: 197 TTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TTDRV T+SFHK+ G++FPGTGD+ +IG KGK ++LNVPL+DGIDD+SY LFK I+
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
++ F+P +V QCGADSL DRLGCFNL+IK H ECVKF++SF +P+L++GGGGYT RN
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326
Query: 316 VARCWCYETGVALGVEVDDKMPQH-EYYEYFGPDYTLHVAPSNM-ENKNSRQLLEEIRNK 373
V+R W YETG+ V + + +P+ + + FGPDY+L+ ++ ENKNS++LLE+IR +
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSLYPMLDDLYENKNSKKLLEDIRIR 386
Query: 374 LLEYLSKLQHAPSVQFQ-ERPPDSELPEADEDQEDGDERWDPDSDMDVDD--ERVKRE 428
LE + LQ APSV+ E P ++ E+++ + + +++ D + E +++E
Sbjct: 387 CLENIRYLQGAPSVRMDAECIPTQDISALTEEEDKIIQEMNEETEADSSNRLEEMEKE 444
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 218/430 (50%), Positives = 282/430 (65%)
Query: 9 PSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPAR 68
P G D KR V Y+Y +VG+++YGQ HPMKP R+ + + L+ Y + + M V++
Sbjct: 21 PDGADVKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLD 80
Query: 69 ERDLCRFHADDYVSFLRSITPE---TQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGS 125
D+ FH +DYV+FL+++TP+ T D + L++FN+GEDCP+F GL+ +C YAGGS
Sbjct: 81 AADISVFHTEDYVNFLQTVTPKLGLTMPDDV--LRQFNIGEDCPIFAGLWDYCTLYAGGS 138
Query: 126 VGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDI 185
V GA +LNH + DI INW GGLHHAKK EASGFCYVNDIVL ILELLK H+RVLY+DIDI
Sbjct: 139 VEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDI 198
Query: 186 HHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESY 245
HHGDGV+EAF +DRVMTVSFH+FG YFPG+G I D G GK++++NVPL I DE Y
Sbjct: 199 HHGDGVQEAFNNSDRVMTVSFHRFGQYFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPY 258
Query: 246 HYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLL 305
LF+ +I V E F P A+VLQCG+DSL DRLG F LS HA VK+++S PL++
Sbjct: 259 LKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMV 318
Query: 306 LGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYE-YFGPDYTLHVAPSNMENKNSR 364
LGGGGYT+RNVARCW ETGV LG+ +DD++P Y YF P M + NS
Sbjct: 319 LGGGGYTLRNVARCWALETGVILGLRMDDEIPGTSLYSHYFTPRLLRPNLVPKMNDANSA 378
Query: 365 QLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDER 424
L I + L L ++ APSVQ Q L E ++ +E+ ER S ++ E
Sbjct: 379 AYLASIEKETLACLRMIRGAPSVQMQNIV-GIRLDEIEQIEEN--ERLQKSSKSSIEYEV 435
Query: 425 VK-REAVEPE 433
K E +E E
Sbjct: 436 GKVSEKMEEE 445
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 198/411 (48%), Positives = 272/411 (66%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
+V + +P V +++GQ HPMKP R+ +T L+ YG+ M + A +L FH
Sbjct: 38 RVSWHANPAVELHHFGQSHPMKPWRLTLTKQLVLAYGMHHAMDLYHCRAATVEELSDFHT 97
Query: 78 DDYVSFLRSITP------ETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
DY+ FL+++ P + +D + RFN G+DCP+FDGLF +C YAG S+ A K
Sbjct: 98 SDYLDFLQTVVPGDMNDAQASKDFSENIVRFNFGDDCPIFDGLFQYCSLYAGASLDAARK 157
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
L + DIAINW+GGLHHAKK EASGFCYVNDIVLAIL+LL+ H RV+Y+DID+HHGDGV
Sbjct: 158 LCNNQADIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRIHPRVMYIDIDVHHGDGV 217
Query: 192 EEAFYTTDRVMTVSFHKFG--DYFPGTGDIRDIG----YSKGKFYSLNVPLDDGIDDESY 245
E+AF++TDRV+TVSFHK+ ++FPGTG + G + G +++NVPL DGIDDESY
Sbjct: 218 EQAFWSTDRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDGIDDESY 277
Query: 246 HYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLL 305
LFK ++G + FRP A+VLQCGADSL DRLGCFNL++ H CV + ++F +P+L+
Sbjct: 278 VQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTKTFGLPMLV 337
Query: 306 LGGGGYTIRNVARCWCYETGVALGVE--VDDKMPQH-EYYEYFGPDYTLHVAPSNM---E 359
+GGGGYT RNV+R W +ET + + + ++ +P + + +FGPD++L S M E
Sbjct: 338 VGGGGYTPRNVSRAWAHETSILIDAQDKINPVIPSNVAFRNHFGPDFSLFPPLSEMRKLE 397
Query: 360 NKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDE 410
NKNSR L I + E L LQ APSVQ PPD L +E +++ +E
Sbjct: 398 NKNSRAYLATIVQTITEQLRYLQAAPSVQMSVIPPDL-LGLREETEKEIEE 447
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 715 (256.8 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 125/173 (72%), Positives = 153/173 (88%)
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
+CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EAF
Sbjct: 47 ICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 106
Query: 196 YTTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I
Sbjct: 107 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVIN 166
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG 307
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LG
Sbjct: 167 QVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG 219
Score = 175 (66.7 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNM 59
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKM 45
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 156/355 (43%), Positives = 225/355 (63%)
Query: 19 VCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
V Y Y PE P R M H+L+ Y LL +M ++KP A ++ FH D
Sbjct: 16 VAYVYSPEYAALC--DSLCKVPKRASMVHSLIEAYSLLDHMMIIKPKVASMEEMASFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G C
Sbjct: 74 AYLQHLQKVSEEGDDDHPESVE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLLDGKCK 132
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTT 198
+AINW GG HHAKK EASGFCY+ND VL IL L ++ +R+LY+D+D+HHGDGVE+AF T
Sbjct: 133 VAINWPGGWHHAKKDEASGFCYLNDAVLGILRLRQKFDRILYIDLDLHHGDGVEDAFSFT 192
Query: 199 DRVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVM 257
+VMTVS HKF +FPGTGD+ DIG KG++YS+NVP+ DGI DE Y+ + + ++ +V
Sbjct: 193 SKVMTVSLHKFSPGFFPGTGDVTDIGLGKGRYYSVNVPIQDGIQDEKYYQICETVLKEVY 252
Query: 258 EVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVA 317
F P AVVLQ GAD+++GD + FN++ +G +C+K++ + + L+LGGGGY + N A
Sbjct: 253 AAFNPEAVVLQLGADTIAGDPMCSFNMTPEGVGKCLKYVLQWQLATLILGGGGYNLANTA 312
Query: 318 RCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
RCW Y TGV LG + ++P HE++ +GPDY L + PS ++N Q ++EI N
Sbjct: 313 RCWTYLTGVILGRTLSSEIPDHEFFTEYGPDYVLEITPSCRPDRNDPQRIQEILN 367
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 864 (309.2 bits), Expect = 1.3e-85, P = 1.3e-85
Identities = 158/343 (46%), Positives = 226/343 (65%)
Query: 31 YYGQGHPMKPHRIR--MTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSIT 88
+ GQ +P + M H+L+ YGLL+ M+V+KP A ++ FH D Y+ L I+
Sbjct: 1023 FSGQSFDAEPVELAASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKIS 1082
Query: 89 PETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLH 148
+ D Q F +G DCPV +G+F + G ++ A L G CD+AINWAGG H
Sbjct: 1083 QDGDNDD-PQSADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWH 1141
Query: 149 HAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
HAKK EASGFCYVND VL IL+L ++++RVLYVD+D+HHGDGVE+AF T +VMTVS HK
Sbjct: 1142 HAKKDEASGFCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHK 1201
Query: 209 FGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVL 267
F +FPGTGD+ D G KG++Y++NVP +DG+ D+ Y F ++ +V +F P AVV+
Sbjct: 1202 FSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVM 1261
Query: 268 QCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVA 327
Q GAD+++GD + FN++ G A+C+ ++ + +P LLLGGGGY + N ARCW Y TG
Sbjct: 1262 QLGADTMAGDPMCSFNMTSVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTV 1321
Query: 328 LGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEI 370
LG + ++P HE++ +GPDY+L ++PS ++N Q LE +
Sbjct: 1322 LGQTLSSEIPDHEFFTEYGPDYSLEISPSCRPDRNESQHLERV 1364
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 155/354 (43%), Positives = 230/354 (64%)
Query: 21 YFYDPEVGNYYYGQGHPMK-PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADD 79
Y Y PE Y +K P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE---YVSICDSLVKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 80 YVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDI 139
Y+ L+ ++ E +D ++ + +G DCP +G+F + GG++ A L G C +
Sbjct: 75 YLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKV 133
Query: 140 AINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTD 199
AINW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS 193
Query: 200 RVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVME 258
+VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V +
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQ 253
Query: 259 VFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVAR 318
F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N AR
Sbjct: 254 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTAR 313
Query: 319 CWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
CW Y TGV LG + ++P HE++ +GPDY L + PS ++N +++I N
Sbjct: 314 CWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILN 367
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 155/354 (43%), Positives = 230/354 (64%)
Query: 21 YFYDPEVGNYYYGQGHPMK-PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADD 79
Y Y PE Y +K P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE---YVSICDSLVKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 80 YVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDI 139
Y+ L+ ++ E +D ++ + +G DCP +G+F + GG++ A L G C +
Sbjct: 75 YLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKV 133
Query: 140 AINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTD 199
AINW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS 193
Query: 200 RVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVME 258
+VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V +
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQ 253
Query: 259 VFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVAR 318
F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N AR
Sbjct: 254 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTAR 313
Query: 319 CWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
CW Y TGV LG + ++P HE++ +GPDY L + PS ++N +++I N
Sbjct: 314 CWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILN 367
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 154/355 (43%), Positives = 227/355 (63%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTT 198
+AINW+GG HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDGVE+AF T
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFT 192
Query: 199 DRVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVM 257
+VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+ + + ++ +V
Sbjct: 193 SKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVY 252
Query: 258 EVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVA 317
+ F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N A
Sbjct: 253 QAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTA 312
Query: 318 RCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
RCW Y TGV LG + ++P HE++ +GPDY L + PS ++N +++I N
Sbjct: 313 RCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILN 367
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 152/353 (43%), Positives = 226/353 (64%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y Y PE + P R M H+L+ Y L + M+++KP A ++ FH D Y
Sbjct: 56 YIYSPEYVSMC--DSLAKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAY 113
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA 140
+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C +A
Sbjct: 114 LQHLQKVSQEGDDDHPDSVE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVA 172
Query: 141 INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDR 200
INW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +
Sbjct: 173 INWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSK 232
Query: 201 VMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEV 259
VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V
Sbjct: 233 VMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIA 292
Query: 260 FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARC 319
F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N ARC
Sbjct: 293 FNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARC 352
Query: 320 WCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
W Y TGV LG + ++P HE++ +GPDY L + PS ++N +++I N
Sbjct: 353 WTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILN 405
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 151/353 (42%), Positives = 226/353 (64%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y Y PE + P R M H+L+ Y L + M+++KP A ++ FH D Y
Sbjct: 18 YIYSPEYVSVC--DSLAKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAY 75
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA 140
+ L+ ++ + D ++ + +G DCP +G+F + G ++ A L G+C +A
Sbjct: 76 LQHLQKVSEDGDDDHPDSIE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVA 134
Query: 141 INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDR 200
INW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +
Sbjct: 135 INWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 201 VMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEV 259
VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V
Sbjct: 195 VMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYIA 254
Query: 260 FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARC 319
F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N ARC
Sbjct: 255 FNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARC 314
Query: 320 WCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
W Y TGV LG + ++P HE++ +GPDY L + PS ++N +++I N
Sbjct: 315 WTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILN 367
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 150/353 (42%), Positives = 225/353 (63%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y Y PE + P R M H+L+ Y L + M+++KP A ++ FH D Y
Sbjct: 18 YIYSPEYVSVC--DSLAKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAY 75
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA 140
+ L+ ++ + D ++ + +G DCP +G+F + G ++ A L G+C +A
Sbjct: 76 LQHLQKVSEDGDDDHPDSIE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVA 134
Query: 141 INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDR 200
INW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +
Sbjct: 135 INWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 201 VMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEV 259
VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ D I DE Y+++ + ++ +V
Sbjct: 195 VMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIA 254
Query: 260 FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARC 319
F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N ARC
Sbjct: 255 FNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARC 314
Query: 320 WCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
W Y TGV LG + ++P HE++ +GPDY L + PS ++N +++I N
Sbjct: 315 WTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILN 367
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 532 (192.3 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 97/116 (83%), Positives = 106/116 (91%)
Query: 129 AVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHG 188
AVKLN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHG
Sbjct: 96 AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG 155
Query: 189 DGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDES 244
DGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDES
Sbjct: 156 DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDES 211
Score = 311 (114.5 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKR 101
+ ++H+DDY+ FLRSI P+ + +Q++R
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQR 93
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 145/237 (61%), Positives = 185/237 (78%)
Query: 202 MTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFR 261
MTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP++ KVME+F+
Sbjct: 1 MTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQ 60
Query: 262 PGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWC 321
P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW
Sbjct: 61 PSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWT 120
Query: 322 YETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKL 381
YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L
Sbjct: 121 YETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRML 180
Query: 382 QHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDRE 438
HAP VQ Q P D+ +PE D ED D DPD + + KR A E E D E
Sbjct: 181 PHAPGVQMQAIPEDA-IPEESGD-EDED---DPDKRISICSSD-KRIACEEEFSDSE 231
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 143/330 (43%), Positives = 208/330 (63%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y Y PE + P R M H+L+ Y L + M+++KP A ++ FH D Y
Sbjct: 18 YIYSPEYVSMC--DSLAKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAY 75
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA 140
+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C +A
Sbjct: 76 LQHLQKVSQEGDDDHPDSVE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVA 134
Query: 141 INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDR 200
INW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +
Sbjct: 135 INWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 201 VMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEV 259
VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V
Sbjct: 195 VMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIA 254
Query: 260 FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG--GGYTIRNVA 317
F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGG GGY + N A
Sbjct: 255 FNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTA 314
Query: 318 RCWCYETGVALGVEVDDKMPQHEYYEYFGP 347
RCW Y TGV LG + ++P HE P
Sbjct: 315 RCWTYLTGVILGKTLSSEIPDHEVKSCLSP 344
>RGD|1309799 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007492 "endoderm development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0009913 "epidermal cell
differentiation" evidence=ISO] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0021766 "hippocampus
development" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034599 "cellular response to oxidative stress" evidence=IDA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=ISO] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISO] [GO:0061198 "fungiform papilla
formation" evidence=ISO] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;IMP] [GO:0070933 "histone H4 deacetylation"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] Pfam:PF00850 RGD:1309799 RGD:619975
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0045892 GO:GO:0008285
GO:GO:0043234 GO:GO:0032403 GO:GO:0042493 GO:GO:0034599
GO:GO:0043524 GO:GO:0000785 GO:GO:0070932 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF321129 IPI:IPI00201536 UniGene:Rn.123394
ProteinModelPortal:Q99PA2 STRING:Q99PA2 InParanoid:Q99PA2
OMA:KCIACEE Genevestigator:Q99PA2 Uniprot:Q99PA2
Length = 256
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 122/220 (55%), Positives = 161/220 (73%)
Query: 233 NVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAEC 292
N PL DGIDDESY +FKP++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+C
Sbjct: 1 NYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKC 60
Query: 293 VKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLH 352
V+F++SFN+P+L+LGG GYTI NVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH
Sbjct: 61 VEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLH 120
Query: 353 VAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDE 410
++PSNM N+N+ + LE+I+ +L E L L H P VQ Q P D+ +PE DED+ED D+
Sbjct: 121 ISPSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPEDA-IPEESGDEDEEDPDK 179
Query: 411 RWDPDSDMDVDDERVKREAVEPEQKDREGLKGMAEQARGF 450
P S D+ + E P+ D EG +G E + F
Sbjct: 180 ---PISICS-SDKCIACEEEFPDS-DEEG-EGGRENSSNF 213
>UNIPROTKB|H3BM24 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
Ensembl:ENST00000425835 Bgee:H3BM24 Uniprot:H3BM24
Length = 161
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 105/156 (67%), Positives = 127/156 (81%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ ++H+
Sbjct: 1 KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHS 60
Query: 78 DDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLC 137
D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 61 DEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQT 120
Query: 138 DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLK 173
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK
Sbjct: 121 DMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLK 156
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 581 (209.6 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 102/200 (51%), Positives = 144/200 (72%)
Query: 144 AGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMT 203
A LH + EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDGVE+AF T +VMT
Sbjct: 47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMT 106
Query: 204 VSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRP 262
VS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+ + + ++ +V + F P
Sbjct: 107 VSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNP 166
Query: 263 GAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCY 322
AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N ARCW Y
Sbjct: 167 KAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTY 226
Query: 323 ETGVALGVEVDDKMPQHEYY 342
TGV LG + ++P HE++
Sbjct: 227 LTGVILGKTLSSEIPDHEFF 246
Score = 43 (20.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQ 60
Y Y PE Y + P R M H+L+ Y L + M+
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMR 55
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/324 (38%), Positives = 182/324 (56%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQ--NMQVLKPFPARERDLCRF 75
+ Y + + YG HP K R + L+ YGL++ N+++L A E L F
Sbjct: 4 RTALIYSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTF 63
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGE-DCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
HA DY+ LR + + D R R+ +G+ D PVF GL+ + + AGG++ A +
Sbjct: 64 HAPDYLDRLREFS---ESDDARADFRYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAE 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
DIA N AGG HHA + +ASGF Y+ND V+AI LL++ RV Y+DID HHGDGV+EA
Sbjct: 121 EGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRV+T+S H+ G YF PGTG + G G YS+N+PL DD + F +
Sbjct: 181 FYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDEVA 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
++ + P +V Q GAD+ D L ++ + ++ +++ +P + +GGGGY +
Sbjct: 241 FPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIPWVAVGGGGYNL 300
Query: 314 RNVARCWCYETGVALGVEVDDKMP 337
NVAR W GV GVE+ ++P
Sbjct: 301 VNVARAWTLAWGVMNGVELPPRLP 324
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/324 (38%), Positives = 182/324 (56%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQ--NMQVLKPFPARERDLCRF 75
+ Y + + YG HP K R + L+ YGL++ N+++L A E L F
Sbjct: 4 RTALIYSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTF 63
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGE-DCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
HA DY+ LR + + D R R+ +G+ D PVF GL+ + + AGG++ A +
Sbjct: 64 HAPDYLDRLREFS---ESDDARADFRYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAE 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
DIA N AGG HHA + +ASGF Y+ND V+AI LL++ RV Y+DID HHGDGV+EA
Sbjct: 121 EGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRV+T+S H+ G YF PGTG + G G YS+N+PL DD + F +
Sbjct: 181 FYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDEVA 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
++ + P +V Q GAD+ D L ++ + ++ +++ +P + +GGGGY +
Sbjct: 241 FPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIPWVAVGGGGYNL 300
Query: 314 RNVARCWCYETGVALGVEVDDKMP 337
NVAR W GV GVE+ ++P
Sbjct: 301 VNVARAWTLAWGVMNGVELPPRLP 324
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 105/231 (45%), Positives = 147/231 (63%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTT 198
+AINW+GG HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDGVE+AF T
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFT 192
Query: 199 DRVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 248
+VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+ +
Sbjct: 193 SKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 103/229 (44%), Positives = 147/229 (64%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y Y PE + P R M H+L+ Y L + M+++KP A ++ FH D Y
Sbjct: 18 YIYSPEYVSMC--DSLAKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAY 75
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA 140
+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C +A
Sbjct: 76 LQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVA 134
Query: 141 INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDR 200
INW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +
Sbjct: 135 INWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 201 VMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 248
VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++
Sbjct: 195 VMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHI 243
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 103/235 (43%), Positives = 147/235 (62%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTT 198
+AINW+GG HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDGVE+AF T
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFT 192
Query: 199 DRVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPI 252
+VMTVS HKF +FPG D+ D+G KG++YS+NVP+ DGI DE Y+ + + +
Sbjct: 193 SKVMTVSLHKFSPGFFPGKSDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESV 247
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 502 (181.8 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 110/292 (37%), Positives = 175/292 (59%)
Query: 100 KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD-----IAINWAGGLHHAKKCE 154
+++ + DC F L + Q A S+ A K+ + + IA+NW GG HH K
Sbjct: 148 EKYGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSH 207
Query: 155 ASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYF 213
A+GFCYVND+VL+I L K V Y+D+D+HHGDGVE AF + +V T S H++ ++
Sbjct: 208 AAGFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFY 267
Query: 214 PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADS 273
PGTG ++ S+ Y N+P + G++D S ++ K I+ ++ F P A+V+QCG D
Sbjct: 268 PGTGSLKS---SRENTY--NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDG 322
Query: 274 LSGDRLGCFNLSIKGHAECVKFMRS-FN-VPLLLLGGGGYTIRNVARCWCYETGVALGV- 330
L+ D +N++IKG+ + + ++ S F+ +P++LLGGGGY+ A+CW Y TG LGV
Sbjct: 323 LALDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVS 382
Query: 331 EVD--DKMPQHEYYEYFGPD----YTLHVA-PSNMENKNSRQLLEEIRNKLL 375
++D D +P+H+ + + D +T H + PS M++ NS + L +I+ LL
Sbjct: 383 DIDTWDILPEHKNLDAYEKDGFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434
Score = 55 (24.4 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 37 PMKPHRIRMTHALLAHYGLLQNMQ-VLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
P R + L+ Y L+ + +PA+ +DL +H D++V L P T D+
Sbjct: 67 PSNKGRQSLVLGLIEAYKLIDLCDGTIDIYPAQTKDLTTYHDDEFVKHLMG--PRTFLDK 124
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 502 (181.8 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 110/292 (37%), Positives = 175/292 (59%)
Query: 100 KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD-----IAINWAGGLHHAKKCE 154
+++ + DC F L + Q A S+ A K+ + + IA+NW GG HH K
Sbjct: 148 EKYGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSH 207
Query: 155 ASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYF 213
A+GFCYVND+VL+I L K V Y+D+D+HHGDGVE AF + +V T S H++ ++
Sbjct: 208 AAGFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFY 267
Query: 214 PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADS 273
PGTG ++ S+ Y N+P + G++D S ++ K I+ ++ F P A+V+QCG D
Sbjct: 268 PGTGSLKS---SRENTY--NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDG 322
Query: 274 LSGDRLGCFNLSIKGHAECVKFMRS-FN-VPLLLLGGGGYTIRNVARCWCYETGVALGV- 330
L+ D +N++IKG+ + + ++ S F+ +P++LLGGGGY+ A+CW Y TG LGV
Sbjct: 323 LALDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVS 382
Query: 331 EVD--DKMPQHEYYEYFGPD----YTLHVA-PSNMENKNSRQLLEEIRNKLL 375
++D D +P+H+ + + D +T H + PS M++ NS + L +I+ LL
Sbjct: 383 DIDTWDILPEHKNLDAYEKDGFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434
Score = 55 (24.4 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 37 PMKPHRIRMTHALLAHYGLLQNMQ-VLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
P R + L+ Y L+ + +PA+ +DL +H D++V L P T D+
Sbjct: 67 PSNKGRQSLVLGLIEAYKLIDLCDGTIDIYPAQTKDLTTYHDDEFVKHLMG--PRTFLDK 124
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 426 (155.0 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 89/231 (38%), Positives = 132/231 (57%)
Query: 98 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASG 157
+ K++N+ DCP+F L +CQ G ++ L+ I INW GG HHA K ASG
Sbjct: 160 ETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASG 219
Query: 158 FCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD-YFPG 215
FCY+ND+VL I L K ++ YVD D+HHGDGVE+AF + ++ T+S H + +FPG
Sbjct: 220 FCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPG 279
Query: 216 TGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLS 275
TG + D K +N+PL G DD + I+ ++E P A++++CG D L
Sbjct: 280 TGSLSDSRKDKNV---VNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLL 336
Query: 276 GDRLGCFNLSIKGHAECV-KFMRSF-NVPLLLLGGGGYTIRNVARCWCYET 324
GDR + L+I+G + + M+S+ + LLGGGGY ++R + Y T
Sbjct: 337 GDRFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387
Score = 84 (34.6 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 37 PMKPH-RIRMTHALLAHYGLLQNMQVLKPFP-ARERDLCRFHADDYVSFL 84
P H + ++T++L+ Y LLQ+ + FP AR+ DL FH+ Y+ +L
Sbjct: 20 PCNNHQKSQLTYSLINAYDLLQHFDEVLTFPYARKDDLLEFHSKSYIDYL 69
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 77/172 (44%), Positives = 117/172 (68%)
Query: 202 MTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVF 260
MTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+ + + ++ +V + F
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAF 60
Query: 261 RPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCW 320
P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N ARCW
Sbjct: 61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCW 120
Query: 321 CYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRN 372
Y TGV LG + ++P HE++ +GPDY L + PS ++N +++I N
Sbjct: 121 TYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILN 172
>UNIPROTKB|E7EWI8 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854 ChiTaRS:HDAC3
IPI:IPI00930193 ProteinModelPortal:E7EWI8 SMR:E7EWI8
Ensembl:ENST00000523353 ArrayExpress:E7EWI8 Bgee:E7EWI8
Uniprot:E7EWI8
Length = 128
Score = 249 (92.7 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
+ V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 77 ADDYVSFL 84
++DY L
Sbjct: 63 SEDYTDSL 70
Score = 208 (78.3 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 38/64 (59%), Positives = 51/64 (79%)
Query: 272 DSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVE 331
DSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+RNVA YET + +
Sbjct: 68 DSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVAT---YETSLLVEEA 124
Query: 332 VDDK 335
+ ++
Sbjct: 125 ISEE 128
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 104/313 (33%), Positives = 156/313 (49%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
K Y + +Y + HP+ P R + L+ +L+ +++ P A ++L H
Sbjct: 4 KAYLIYSDDYLSYRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHD 63
Query: 78 DDYVSFLRSIT--PETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
YV + +++ PE RF +G ED PVF G+ AGGS GA +
Sbjct: 64 PAYVEAVMNLSKNPENVNGS-----RFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYE 118
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
G D N AGGLHHA + ASGFC ND+ +AI + ++ +V YVD+D HHGDGV+
Sbjct: 119 GEADHVFNIAGGLHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWL 178
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY+ V+T+S H+ G Y FPGTG I ++G +N+PL+ +D+S+ + + I+
Sbjct: 179 FYSDPGVLTISIHETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIV 238
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPL-----LLLGG 308
+++ F+P +V Q G DS D L + E K + + L GG
Sbjct: 239 PELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGG 298
Query: 309 GGYTI-RNVARCW 320
GGY R V R W
Sbjct: 299 GGYDYWRVVPRAW 311
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 104/313 (33%), Positives = 156/313 (49%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
K Y + +Y + HP+ P R + L+ +L+ +++ P A ++L H
Sbjct: 4 KAYLIYSDDYLSYRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHD 63
Query: 78 DDYVSFLRSIT--PETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
YV + +++ PE RF +G ED PVF G+ AGGS GA +
Sbjct: 64 PAYVEAVMNLSKNPENVNGS-----RFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYE 118
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
G D N AGGLHHA + ASGFC ND+ +AI + ++ +V YVD+D HHGDGV+
Sbjct: 119 GEADHVFNIAGGLHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWL 178
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY+ V+T+S H+ G Y FPGTG I ++G +N+PL+ +D+S+ + + I+
Sbjct: 179 FYSDPGVLTISIHETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIV 238
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPL-----LLLGG 308
+++ F+P +V Q G DS D L + E K + + L GG
Sbjct: 239 PELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGG 298
Query: 309 GGYTI-RNVARCW 320
GGY R V R W
Sbjct: 299 GGYDYWRVVPRAW 311
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 98/311 (31%), Positives = 156/311 (50%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
+ Y + Y + HP R+ +T+ LL G + Q++ P A + ++ H ++Y
Sbjct: 5 FIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEY 64
Query: 81 VSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDI 139
++ ++ + + + +G ED P+F + GG++ + G
Sbjct: 65 INAVKRAGEGKLEKSIAMT--YGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSGKVKH 122
Query: 140 AINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE-RVLYVDIDIHHGDGVEEAFYTT 198
A+N GGLHH + +ASGFC ND +A+ + K++ RVLY+D D HHGDGV+ +FY
Sbjct: 123 ALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDD 182
Query: 199 DRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVM 257
V T+S H+ G Y FPGTG + + G G YS NVPLD +DES+ ++ ++ +V
Sbjct: 183 PNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVA 242
Query: 258 EVFRPGAVVLQCGADSLSGDRLG--CFNLSIKGHAECVKFMRSFNVPL-----LLLGGGG 310
F+P ++ Q GAD+ D L C ++I + E K R + +GGGG
Sbjct: 243 AYFKPDIILTQNGADAHYYDPLTHLCATMNI--YREIPKLAREIANEYCEGRWIAVGGGG 300
Query: 311 YTI-RNVARCW 320
Y R V R W
Sbjct: 301 YDHWRVVPRAW 311
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 98/311 (31%), Positives = 156/311 (50%)
Query: 21 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
+ Y + Y + HP R+ +T+ LL G + Q++ P A + ++ H ++Y
Sbjct: 5 FIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEY 64
Query: 81 VSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDI 139
++ ++ + + + +G ED P+F + GG++ + G
Sbjct: 65 INAVKRAGEGKLEKSIAMT--YGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSGKVKH 122
Query: 140 AINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE-RVLYVDIDIHHGDGVEEAFYTT 198
A+N GGLHH + +ASGFC ND +A+ + K++ RVLY+D D HHGDGV+ +FY
Sbjct: 123 ALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDD 182
Query: 199 DRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVM 257
V T+S H+ G Y FPGTG + + G G YS NVPLD +DES+ ++ ++ +V
Sbjct: 183 PNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVA 242
Query: 258 EVFRPGAVVLQCGADSLSGDRLG--CFNLSIKGHAECVKFMRSFNVPL-----LLLGGGG 310
F+P ++ Q GAD+ D L C ++I + E K R + +GGGG
Sbjct: 243 AYFKPDIILTQNGADAHYYDPLTHLCATMNI--YREIPKLAREIANEYCEGRWIAVGGGG 300
Query: 311 YTI-RNVARCW 320
Y R V R W
Sbjct: 301 YDHWRVVPRAW 311
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 110/309 (35%), Positives = 152/309 (49%)
Query: 32 YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPET 91
YG HP+ R+ L G Q AR L FH DY++ L+ E
Sbjct: 13 YGAVHPLAIPRVSTVIDLCRAMGWFAPGQYRTSPRARPAALRAFHTPDYIAALQQA--EA 70
Query: 92 QQDQLRQLK-RFNVGE-DCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHH 149
+Q + + R +G PVF ++ T AGGS+ A + G N GG HH
Sbjct: 71 EQAVSEETRARHGLGTLPNPVFAEMYRRPATAAGGSLLAAELVARG--HRVFNPGGGTHH 128
Query: 150 AKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
A GFCY+ND VLAIL L + RV YVDID HH DGV AF + V +S H+
Sbjct: 129 GFADRAGGFCYLNDPVLAILALQRLGCARVAYVDIDAHHCDGVASAFQGSQTVRMISIHE 188
Query: 209 FGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQ 268
+P TG + D + G +LN+P+ ++D +Y + +I + FRP AVVLQ
Sbjct: 189 -ARRWPFTGALEDD--AGGA--ALNLPVARDLNDSAYALILDRLILPAVAGFRPDAVVLQ 243
Query: 269 CGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 328
CGAD+++ D L LS H + V+ + + LL+LGGGGY +VAR W
Sbjct: 244 CGADAVAEDPLSRLALSNCAHRDTVRALAALCPRLLVLGGGGYNPWSVARAWTGVWATLS 303
Query: 329 GVEVDDKMP 337
G E+ D++P
Sbjct: 304 GAEIPDRLP 312
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 83/214 (38%), Positives = 118/214 (55%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTT 198
+AINW+GG HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDG T
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG------TG 186
Query: 199 DRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSL 232
D V V K G Y+ I+D G K+Y +
Sbjct: 187 D-VSDVGLGK-GRYYSVNVPIQD-GIQDEKYYQI 217
Score = 325 (119.5 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 59/132 (44%), Positives = 89/132 (67%)
Query: 199 DRVMTVSFH-KFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVM 257
+R++ V GD GTGD+ D+G KG++YS+NVP+ DGI DE Y+ + + ++ +V
Sbjct: 170 ERILYVDLDLHHGD---GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVY 226
Query: 258 EVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVA 317
+ F P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGGGGY + N A
Sbjct: 227 QAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTA 286
Query: 318 RCWCYETGVALG 329
RCW Y TGV LG
Sbjct: 287 RCWTYLTGVILG 298
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 67/142 (47%), Positives = 98/142 (69%)
Query: 202 MTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVF 260
MTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V F
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAF 60
Query: 261 RPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG--GGYTIRNVAR 318
P AVVLQ GAD+++GD + FN++ G +C+K++ + + L+LGG GGY + N AR
Sbjct: 61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTAR 120
Query: 319 CWCYETGVALGVEVDDKMPQHE 340
CW Y TGV LG + ++P HE
Sbjct: 121 CWTYLTGVILGKTLSSEIPDHE 142
>TAIR|locus:2076053 [details] [associations]
symbol:hda17 "histone deacetylase 17" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0016575
"histone deacetylation" evidence=IEA] INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL353818 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 HSSP:Q9BY41 HOGENOM:HOG000112868
ProtClustDB:CLSN2684485 EMBL:BT014712 IPI:IPI00519666 PIR:T48929
RefSeq:NP_190035.1 UniGene:At.66492 ProteinModelPortal:Q9LXN8
SMR:Q9LXN8 PaxDb:Q9LXN8 EnsemblPlants:AT3G44490.1 GeneID:823574
KEGG:ath:AT3G44490 TAIR:At3g44490 InParanoid:Q9LXN8 OMA:GGECVEY
PhylomeDB:Q9LXN8 Genevestigator:Q9LXN8 Uniprot:Q9LXN8
Length = 158
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 67/145 (46%), Positives = 100/145 (68%)
Query: 282 FNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEY 341
F++ GHAECVKF++ FN+PLL+ GGGGYT NVARCW ETG+ L E+ +++ +++Y
Sbjct: 3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDY 62
Query: 342 YEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEA 401
+YF PD++L + ++EN N++ + I+ ++LE L +QHAPSVQ QE PPD +P+
Sbjct: 63 IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDF 122
Query: 402 DEDQEDGDERWDP---DSDMDVDDE 423
DED+++ D R D D + DDE
Sbjct: 123 DEDEQNPDVRVDQRSRDKQIQRDDE 147
>UNIPROTKB|E7EW22 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
Length = 185
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 70/171 (40%), Positives = 101/171 (59%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGD 189
+AINW+GG HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGD
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGD 183
>UNIPROTKB|F1N0W0 [details] [associations]
symbol:HDAC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0000122 GO:GO:0032922 GO:GO:0046329
GO:GO:0031490 GO:GO:0005876 GO:GO:0016575 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 OMA:GGECVEY
GeneTree:ENSGT00530000062889 GO:GO:0033558 EMBL:DAAA02020441
EMBL:DAAA02020442 IPI:IPI00688242 Ensembl:ENSBTAT00000023086
Uniprot:F1N0W0
Length = 163
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 71/162 (43%), Positives = 100/162 (61%)
Query: 280 GCFNLSIKGHA-ECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQ 338
GC+ +G ECV++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P
Sbjct: 1 GCWGQRDRGRGGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPY 60
Query: 339 HEYYEYFGPDYTLHVAPSN-MENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPD-- 395
EY+EYF PD+TLH S +EN+NSRQ L++IR + E L L HAPSVQ + P D
Sbjct: 61 SEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLL 120
Query: 396 --SELPEADEDQEDGDERWD----PDSDMDVDDERVKREAVE 431
EAD ++ +E + P+ D D + K VE
Sbjct: 121 TYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVE 162
>UNIPROTKB|E5RG37 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976554 ProteinModelPortal:E5RG37 SMR:E5RG37
Ensembl:ENST00000523628 ArrayExpress:E5RG37 Bgee:E5RG37
Uniprot:E5RG37
Length = 103
Score = 331 (121.6 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 58/103 (56%), Positives = 76/103 (73%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR 97
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 98 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA 140
Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN D+A
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMA 103
>UNIPROTKB|E5RFP9 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00974336 ProteinModelPortal:E5RFP9 SMR:E5RFP9
Ensembl:ENST00000521163 ArrayExpress:E5RFP9 Bgee:E5RFP9
Uniprot:E5RFP9
Length = 109
Score = 325 (119.5 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 14 GVKRKVCYFYDP-------EVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFP 66
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P
Sbjct: 7 GGKKKVCYYYDVCVFSILGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK 66
Query: 67 ARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCP 109
A ++ ++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCP
Sbjct: 67 ATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCP 109
>UNIPROTKB|E5RH52 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00980006 ProteinModelPortal:E5RH52 SMR:E5RH52
Ensembl:ENST00000521610 ArrayExpress:E5RH52 Bgee:E5RH52
Uniprot:E5RH52
Length = 100
Score = 325 (119.5 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 56/96 (58%), Positives = 73/96 (76%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR 97
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 98 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 96
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 342 (125.4 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 97/350 (27%), Positives = 170/350 (48%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGL-----LQNMQVLKPF----PARE-- 69
Y +V Y Y HP P RI + L G+ L + + PF P RE
Sbjct: 129 YHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREAT 188
Query: 70 -RDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGG 128
++ + H++D++ F++S T + +DQL LK G+ V + + + GG++
Sbjct: 189 SEEILQVHSEDHLKFIQS-TEDMSRDQL--LKETETGDSIYVNNDSYLSAKLSCGGTIEA 245
Query: 129 AVKLNHGLC--DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH----ERVLYVD 182
+ G +AI G HHA+ +GFC +++ +A +LK + R++ VD
Sbjct: 246 CKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVD 304
Query: 183 IDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGT--GDIRDIGYSKGKFYSLNVPL-D 237
DIHHG+G ++AFY RV+ +S H+F G ++PGT GD+ +G G+ +++N+P
Sbjct: 305 WDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRS 364
Query: 238 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMR 297
G+ D Y Y F II V+ F P +++ G D+ GD +G +++ G+ ++
Sbjct: 365 SGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLK 424
Query: 298 SF-NVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKM---PQHEYYE 343
L ++ GGY + ++++ V +G ++ + PQ E E
Sbjct: 425 GIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTITLRPQAEAIE 474
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 342 (125.4 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 97/350 (27%), Positives = 170/350 (48%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGL-----LQNMQVLKPF----PARE-- 69
Y +V Y Y HP P RI + L G+ L + + PF P RE
Sbjct: 129 YHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREAT 188
Query: 70 -RDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGG 128
++ + H++D++ F++S T + +DQL LK G+ V + + + GG++
Sbjct: 189 SEEILQVHSEDHLKFIQS-TEDMSRDQL--LKETETGDSIYVNNDSYLSAKLSCGGTIEA 245
Query: 129 AVKLNHGLC--DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH----ERVLYVD 182
+ G +AI G HHA+ +GFC +++ +A +LK + R++ VD
Sbjct: 246 CKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVD 304
Query: 183 IDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGT--GDIRDIGYSKGKFYSLNVPL-D 237
DIHHG+G ++AFY RV+ +S H+F G ++PGT GD+ +G G+ +++N+P
Sbjct: 305 WDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRS 364
Query: 238 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMR 297
G+ D Y Y F II V+ F P +++ G D+ GD +G +++ G+ ++
Sbjct: 365 SGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLK 424
Query: 298 SF-NVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKM---PQHEYYE 343
L ++ GGY + ++++ V +G ++ + PQ E E
Sbjct: 425 GIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTITLRPQAEAIE 474
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 305 (112.4 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 94/316 (29%), Positives = 147/316 (46%)
Query: 23 YDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVS 82
YDP G + HP R+R ++L + ++ PA +L FH +Y+
Sbjct: 28 YDP--GFLDVLEKHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIE 85
Query: 83 FLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTY-----AGGSVGGAVK--LN-H 134
L + D+ GE C + G F ++ A G+ A++ L+ H
Sbjct: 86 KL------VEADKS--------GERCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILDCH 131
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVE 192
G A+ G HH++ +A G+C++N+ LA+ L RV +DID+H+G+G
Sbjct: 132 GKIAYALVRPPG-HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTA 190
Query: 193 EAFYTTDRVMTVSFH----KFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 248
E FYT+D+V+TVS H +G P G I ++G G Y+LNVPL +G D Y Y
Sbjct: 191 EGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDRGYEYA 250
Query: 249 FKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPL 303
++ + F P VVL G DS + D G +L++ G+ + MR + L
Sbjct: 251 MNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHGRL 310
Query: 304 LLLGGGGYTIRNVARC 319
L++ GGY + A C
Sbjct: 311 LMVQEGGYHVTYAAYC 326
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 321 (118.1 bits), Expect = 8.5e-26, P = 8.5e-26
Identities = 92/329 (27%), Positives = 160/329 (48%)
Query: 18 KVCYFYDPEVGNY--YYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
KVCY YD ++ + GHP +P RI+ H + YGLL+ M+ L P A ++C
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCP-VFDGLFSFCQTYAGGSVGGAV---- 130
H +V+ +R + ++ +N P FD C T A G V AV
Sbjct: 603 HTRAHVNTVRRLLGREPKELHDAAGIYNSVYLHPRTFD-----CATLAAGLVLQAVDSVL 657
Query: 131 --KLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIH 186
+ G+C++ G HHA++ GFC N++ +A ++ ERVL VD D+H
Sbjct: 658 RGESRSGICNVR---PPG-HHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVH 713
Query: 187 HGDGVEEAFYTTDRVMTVSFHKF--GDYFP-GT-GDIRDIGYSKGKFYSLNVPLDD-GID 241
HG+G + F + +V+ +S H++ G +FP G G+ +G G+ +++N+P + G+
Sbjct: 714 HGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMG 773
Query: 242 DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-N 300
D Y F+ +I + F P V++ G D+ GD LG ++ +G+ ++ + +
Sbjct: 774 DLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALAS 833
Query: 301 VPLLLLGGGGYTIRNVARCWCYETGVALG 329
+++ GGY + +++ T LG
Sbjct: 834 GRIIVCLEGGYNVNSISYAMTMCTKTLLG 862
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 74/316 (23%), Positives = 139/316 (43%)
Query: 15 VKRKVCYFYDPEVGNY--YYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDL 72
V++ YD + + + + H P R L + L A + ++
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 73 CRFHADDYVSFLRSITPETQQDQLRQLK-RFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
R H +++ L+ + +++ +L R+ + + F +G ++
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRY---DSIYIHPSTFELSLLASGSTIELVDH 228
Query: 132 LNHGLCD--IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHH 187
L G +AI G HHA K E +G+C+ N++ LA L H +R+L +D D+HH
Sbjct: 229 LVAGKAQNGMAIIRPPG-HHAMKAEYNGYCFFNNVALATQHALDVHKLQRILIIDYDVHH 287
Query: 188 GDGVEEAFYTTDRVMTVSFHKF--GDYFPGT--GDIRDIGYSKGKFYSLNVPLD-DGIDD 242
G G + FY RV+ S H+F G ++P D IG G Y+ NVPL+ G+ +
Sbjct: 288 GQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTN 347
Query: 243 ESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVK-FMRSFNV 301
Y +F+ ++ V F+P +++ G D+ G G ++ + + +R +
Sbjct: 348 GDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADA 407
Query: 302 PLLLLGGGGYTIRNVA 317
+ ++ GGY + ++A
Sbjct: 408 RVAVVLEGGYCLDSLA 423
>UNIPROTKB|C9J8F0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00878343
ProteinModelPortal:C9J8F0 SMR:C9J8F0 STRING:C9J8F0 PRIDE:C9J8F0
Ensembl:ENST00000421523 BindingDB:C9J8F0 ArrayExpress:C9J8F0
Bgee:C9J8F0 Uniprot:C9J8F0
Length = 132
Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 54/133 (40%), Positives = 81/133 (60%)
Query: 45 MTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNV 104
M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E D ++ + +
Sbjct: 1 MVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGL 59
Query: 105 GEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDI 164
G DCP +G+F + G ++ A L G+C +AINW+GG HHAKK EASGFCY+ND
Sbjct: 60 GYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDA 119
Query: 165 VLAILELLKQHER 177
VL IL L ++ ER
Sbjct: 120 VLGILRLRRKFER 132
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 312 (114.9 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 92/337 (27%), Positives = 164/337 (48%)
Query: 29 NYY-YGQGHPMKPHRIRMTHALLAHYGLLQNM---------QVLKPFPAR---ERDLCRF 75
+Y+ Y HP P RI + +LA GL+ + ++ P R ++
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 134
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H +++ F+ S T + +++L LK G+ + ++ + GG++ + G
Sbjct: 135 HTKEHLEFIES-TEKMSREEL--LKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEG 191
Query: 136 LC--DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH----ERVLYVDIDIHHGD 189
+A+ G HHA+ A GFC +++ +A +LK + R++ +D DIHHG+
Sbjct: 192 RVKNSLAVVRPPG-HHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGN 250
Query: 190 GVEEAFYTTDRVMTVSFHKF--GDYFPGT--GDIRDIGYSKGKFYSLNV--PLDDGIDDE 243
G +++FY D+V+ VS H+F G Y+PGT G G KG+ ++ N+ P+ G+ D
Sbjct: 251 GTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVG-GVGDA 309
Query: 244 SYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLG-CF-NLSIKGH-AECVKFMRSFN 300
Y + F+ ++ + F+P V++ G D+ GD +G C S GH +K + N
Sbjct: 310 EYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLARGN 369
Query: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMP 337
+ ++L GGY + +AR V +G E D++P
Sbjct: 370 LCVVL--EGGYNLDAIARSALSVAKVLIG-EPPDELP 403
>TAIR|locus:2098105 [details] [associations]
symbol:hda10 "histone deacetylase 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 EMBL:AL138652 IPI:IPI00526042
PIR:T47441 RefSeq:NP_190052.1 UniGene:At.53729 HSSP:Q9BY41
ProteinModelPortal:Q9M1N8 SMR:Q9M1N8 EnsemblPlants:AT3G44660.1
GeneID:823592 KEGG:ath:AT3G44660 TAIR:At3g44660
HOGENOM:HOG000112868 InParanoid:Q9M1N8 OMA:WQLERTK PhylomeDB:Q9M1N8
ProtClustDB:CLSN2684485 Genevestigator:Q9M1N8 Uniprot:Q9M1N8
Length = 142
Score = 284 (105.0 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 52/118 (44%), Positives = 79/118 (66%)
Query: 309 GGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLE 368
GGYT NVARCW ETG+ L E+ +++P+++Y +YF PD++L + ++EN N++ +
Sbjct: 14 GGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYIS 73
Query: 369 EIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP---DSDMDVDDE 423
I+ ++LE L +QHAPSVQ QE PPD +P+ DED+++ D R D D + DDE
Sbjct: 74 SIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRVDQRSRDKQIQRDDE 131
>UNIPROTKB|E5RHE7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00979387 ProteinModelPortal:E5RHE7 SMR:E5RHE7
Ensembl:ENST00000522371 ArrayExpress:E5RHE7 Bgee:E5RHE7
Uniprot:E5RHE7
Length = 86
Score = 282 (104.3 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 47/86 (54%), Positives = 64/86 (74%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR 97
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 98 QLKRFNVGEDCPVFDGLFSFCQTYAG 123
Q++RFNVGEDCPVFDGLF FCQ G
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTG 86
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 295 (108.9 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 122/484 (25%), Positives = 221/484 (45%)
Query: 16 KRKVCYFYDPEVGNYYYGQGH-PMK-PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
+RKV YD + + G ++ P RIR+ L G+ Q VL A ++ L
Sbjct: 57 QRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGVTQRCVVLGGSKAEDKHLK 116
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
H +V+ ++SI+ T++ R+ K + + + G AG V A K+
Sbjct: 117 LVHTKKHVNLVKSIS--TKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVVKVAEKVA 174
Query: 134 HGL--CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDIDIH 186
G C AI G HHA+ EA GFC N++ +A LL + +++L VD DIH
Sbjct: 175 EGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIH 233
Query: 187 HGDGVEEAFYTTDRVMTVSFHKF--GDYFP-GT-GDIRDIGYSKGKFYSLNVPLDDG-ID 241
HG+G ++ F+ RV+ S H+ G ++P G GD +G G+ +++NVP + G
Sbjct: 234 HGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGGCG 293
Query: 242 DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-N 300
D Y ++ I+ V + F+P ++L G D+ GD LG ++ G++ +K + F +
Sbjct: 294 DADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEFAH 353
Query: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360
++L GGY + ++ + + + V ++DK +H +
Sbjct: 354 GKIVLALEGGYNLESLGK----SSLACVQVLLEDKQ--------------IHGSSETYPL 395
Query: 361 KNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWD----PDS 416
+++R++++ +R +L Y L + + + P +E AD + +E D
Sbjct: 396 ESTRRVIQAVRERLCTYWPSLDASMASNENLKNPSAERNSADALLREVEELKSLMAARDG 455
Query: 417 DMDVDDERVKREAVEPEQKDREGLKG-MAEQARGFDMIADDSISTKVLDMSSMPIDEPSI 475
+++ + +K + E E ++E G M +AR D+I + K+ + DE
Sbjct: 456 ELEARRKELKAKNKELEANEKELEAGLMLIRARE-DVIC--GLHAKIESLQQER-DEAVA 511
Query: 476 KVEQ 479
K E+
Sbjct: 512 KAER 515
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 292 (107.8 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 98/362 (27%), Positives = 164/362 (45%)
Query: 34 QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARE---RDLCRFHADDYVSFLRSITPE 90
Q HP +P R+R A LA G+ + P ARE ++L H ++V + + T +
Sbjct: 169 QPHPERPDRLRAIAASLATAGVFPGRCL--PINAREITKQELQMVHTSEHVDAVDT-TSQ 225
Query: 91 TQQDQLRQLKRFNV--GEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLH 148
N + GL C A G VK L + G H
Sbjct: 226 LLYSYFTSDTYANEYSARAARLAAGL---CADLATDIFTGRVKNGFAL----VRPPG--H 276
Query: 149 HAKKCEASGFCYVNDI-VLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH 207
HA A GFC N+ V A++ ++VL VD D+HHG+G +E F V+ +S H
Sbjct: 277 HAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLH 336
Query: 208 KF--GDYFPGTGDIRDIGYSKGKFYSLNVPLD-DGIDDESYHYLFKPIIGKVMEVFRPGA 264
+ G+++PGTG ++G + G+ Y +NVP G+ D+ Y + F+ ++ + F P
Sbjct: 337 RHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDF 396
Query: 265 VVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-NVPLLLLGGGGYTIRNVARCWCYE 323
V++ G D+ GD LGC +++ G++ + + +L++ GGY +R+++
Sbjct: 397 VIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAV 456
Query: 324 TGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNS-----RQLLEEIRNKLLEYL 378
V LG ++++P G L V +E S +LL E+ +L+E
Sbjct: 457 IKVLLGENPENELPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENK 516
Query: 379 SK 380
S+
Sbjct: 517 SE 518
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 273 (101.2 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 80/293 (27%), Positives = 137/293 (46%)
Query: 35 GHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQD 94
GH P R +L+ GL + + + A E DL R H+ Y+ ++++
Sbjct: 42 GHAESPETKRRLKSLMDVSGLTRQLHLRSAAAATEDDLLRVHSAAYLQRFKALSDAGGG- 100
Query: 95 QLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGL-HHAKKC 153
++G++ PV G + Q AG ++ + G D A + + HH +
Sbjct: 101 --------HLGDEAPVGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTRD 152
Query: 154 EASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD 211
+A GFC++ +I +AI +H +V +D D+HHG+G + F V+T+S H+ G
Sbjct: 153 QAMGFCFLANIAIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQDGC 212
Query: 212 YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGA 271
+ PG G +D G G ++N+PL G ++Y Y + I+ +E F P +++ CG
Sbjct: 213 FPPGYGGEQDRGRGAGLGCNINIPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVACGY 272
Query: 272 DSLSGDRLGCFNL---SIKGHAECVKFM--RSFNVPLLLLGGGGYTIRNVARC 319
D+ + D L L S + +C+K R L+L+ GGY+ V C
Sbjct: 273 DANAVDPLARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFC 325
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 289 (106.8 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 88/307 (28%), Positives = 143/307 (46%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
HP P RI + LL + A E +L H+ ++S ++S ++ +
Sbjct: 463 HPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKS----SEHMK 518
Query: 96 LRQLKRFNVGEDCPVFDGLFSF-CQTYAGGSV-GGAVKLNHGLCD--IAINWAGGLHHAK 151
R L R E +F S+ C A GS A + G +AI G HHA+
Sbjct: 519 PRDLNRLG-DEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPG-HHAE 576
Query: 152 KCEASGFCYVNDIVLAIL---ELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
K A GFC+ N L + ++ RVL VD D+HHG+G + F D V+ +S H+
Sbjct: 577 KDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHR 636
Query: 209 FGD--YFPGTGDIR-D-IGYSKGKFYSLNVPLDDG-IDDESYHYLFKPIIGKVMEVFRPG 263
+ D +FP + D D +G KG+ Y++N+P + G + D Y F ++ + F P
Sbjct: 637 YEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPE 696
Query: 264 AVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP-LLLLGGGGYTIRNVARCWCY 322
V++ G D+ GD LG F ++ +G+A + S +L++ GGY + +++
Sbjct: 697 LVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSM 756
Query: 323 ETGVALG 329
T + LG
Sbjct: 757 CTSMLLG 763
Score = 251 (93.4 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 80/305 (26%), Positives = 142/305 (46%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
HP P R+ +L GLL ++ E +L H +YV ++S T +++
Sbjct: 82 HPECPARVSTVMEMLETEGLLGRCVQVEARAVTEDELLLVHTKEYVELMKS-TQNMTEEE 140
Query: 96 LRQL-KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK-LNHGLCD-IAINWAGGLHHAKK 152
L+ L +++ + + G FS G + K + L + +IN G HHA+
Sbjct: 141 LKTLAEKY---DSVYLHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRPPG-HHAQA 196
Query: 153 CEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF- 209
+ +GFC N++ +A K+H +RVL VD D+HHG G++ F V+ S H++
Sbjct: 197 DKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYE 256
Query: 210 -GDYFPGT--GDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAV 265
G ++P D +G G+ Y++N+P + G++ Y F+ ++ V F+P V
Sbjct: 257 DGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPVAYEFQPQLV 316
Query: 266 VLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRNVARCWCYET 324
++ G D++ GD G +S + + ++ L+L GGY +++ A C
Sbjct: 317 LVAAGFDAVIGDPKGGMQVSPECFSILTHMLKGVAQGRLVLALEGGYNLQSTAEGVCASM 376
Query: 325 GVALG 329
LG
Sbjct: 377 RSLLG 381
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 286 (105.7 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 92/324 (28%), Positives = 151/324 (46%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
YD ++ ++Y + HP P RI L GL L PA + +L H+ +Y
Sbjct: 494 YDQQMMDHYNLWDSHHPEMPQRILRIMRRLEELGLAGRCLALPARPATDAELLACHSAEY 553
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGED----CPVFDGLFSFCQTYAGGS--VGGAVKLNH 134
VS +R+ T++ + R+L R D CP G F+ Q AG + + AV
Sbjct: 554 VSRIRA----TEKMRTRELHREGANYDSIYICP---GTFACAQLAAGAACRLVEAVLAGE 606
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAI--LELLKQHE-RVLYVDIDIHHGDGV 191
L IA+ G HHA++ A GFC+ N + +A + + H R+L VD D+HHG+G
Sbjct: 607 VLNGIAVVRPPG-HHAERDSACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGT 665
Query: 192 EEAFYTTDRVMTVSFHKF--GDYFP-GT-GDIRDIGYSKGKFYSLNVPLDDG-IDDESYH 246
+ F V+ +S H++ G +FP G G IG + G +++NV + + D Y
Sbjct: 666 QHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGPRVGDPEYL 725
Query: 247 YLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-NVPLLL 305
+ ++ + F P V++ G D+ GD LG +S + +A + N ++L
Sbjct: 726 AAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLLMGLANGRIIL 785
Query: 306 LGGGGYTIRNVARCWCYETGVALG 329
+ GGY + +++ T LG
Sbjct: 786 ILEGGYNLISISESMAACTRSLLG 809
Score = 231 (86.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 80/307 (26%), Positives = 136/307 (44%)
Query: 24 DPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYV 81
D ++ ++ + P P R+ L GLL + A + +L H+ +Y+
Sbjct: 101 DEQLNEFHCLWDDSFPEGPERLHAIKEQLMQEGLLDRCVSFQARFAEKEELMLVHSLEYI 160
Query: 82 SFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL---CD 138
+ + T + +LR L + + + ++ C A GSV V G
Sbjct: 161 DLMET-TQYMNEGELRVLA--DTYDSVYLHPNSYT-CACLASGSVLRLVDAVLGAEIRNG 216
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFY 196
+AI G HHA+ G+C N + LA ++H+ RVL VD D+HHG G + F
Sbjct: 217 MAIIRPPG-HHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFD 275
Query: 197 TTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKP 251
V+ S H++ G ++P + G+ +G+ Y++NVP + G+ D Y F
Sbjct: 276 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLH 335
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGG 310
++ V F+P V++ G D+L GD G + G A+ + L+L GG
Sbjct: 336 LLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGG 395
Query: 311 YTIRNVA 317
Y +R++A
Sbjct: 396 YNLRSLA 402
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 280 (103.6 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 90/325 (27%), Positives = 149/325 (45%)
Query: 23 YDPEVGNY--YYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
YD + N+ + HP P RI L GL L P PA E +L H+ +Y
Sbjct: 485 YDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEY 544
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV--GGAVKLNHG-LC 137
V LR+ T++ + R+L R + FD ++ T+A + G A +L L
Sbjct: 545 VGHLRA----TEKMKTRELHR-----ESSNFDSIYICPSTFACAQLATGAACRLVEAVLS 595
Query: 138 DIAINWAGGL----HHAKKCEASGFCYVNDIVLAI--LELLKQHE-RVLYVDIDIHHGDG 190
+N A + HHA++ A GFC+ N + +A + + H R+L VD D+HHG+G
Sbjct: 596 GEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNG 655
Query: 191 VEEAFYTTDRVMTVSFHKF--GDYFP--GTGDIRDIGYSKGKFYSLNVPLDDG-IDDESY 245
+ F V+ VS H++ G +FP G IG + G +++NV + + D Y
Sbjct: 656 TQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADY 715
Query: 246 HYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-NVPLL 304
+ ++ + F P V++ G D+ GD LG +S +G+A + + ++
Sbjct: 716 LAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRII 775
Query: 305 LLGGGGYTIRNVARCWCYETGVALG 329
L+ GGY + +++ T LG
Sbjct: 776 LILEGGYNLTSISESMAACTRSLLG 800
Score = 227 (85.0 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 80/307 (26%), Positives = 134/307 (43%)
Query: 24 DPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYV 81
D ++ ++ + P P R+ L GLL + A + +L H+ +Y+
Sbjct: 91 DEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYI 150
Query: 82 SFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL---CD 138
+ + T + +LR L + + + +S C A GSV V G
Sbjct: 151 DLMET-TQYMNEGELRVLA--DTYDSVYLHPNSYS-CACLASGSVLRLVDAVLGAEIRNG 206
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFY 196
+AI G HHA+ G+C N + +A ++H RVL VD D+HHG G + F
Sbjct: 207 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFD 265
Query: 197 TTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKP 251
V+ S H++ G ++P + G+ +G+ Y++NVP + G+ D Y F
Sbjct: 266 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLH 325
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGG 310
++ V F+P V++ G D+L GD G + G A+ + L+L GG
Sbjct: 326 VLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGG 385
Query: 311 YTIRNVA 317
Y +R +A
Sbjct: 386 YNLRALA 392
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 280 (103.6 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 90/325 (27%), Positives = 149/325 (45%)
Query: 23 YDPEVGNY--YYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
YD + N+ + HP P RI L GL L P PA E +L H+ +Y
Sbjct: 499 YDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEY 558
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV--GGAVKLNHG-LC 137
V LR+ T++ + R+L R + FD ++ T+A + G A +L L
Sbjct: 559 VGHLRA----TEKMKTRELHR-----ESSNFDSIYICPSTFACAQLATGAACRLVEAVLS 609
Query: 138 DIAINWAGGL----HHAKKCEASGFCYVNDIVLAI--LELLKQHE-RVLYVDIDIHHGDG 190
+N A + HHA++ A GFC+ N + +A + + H R+L VD D+HHG+G
Sbjct: 610 GEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNG 669
Query: 191 VEEAFYTTDRVMTVSFHKF--GDYFP--GTGDIRDIGYSKGKFYSLNVPLDDG-IDDESY 245
+ F V+ VS H++ G +FP G IG + G +++NV + + D Y
Sbjct: 670 TQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADY 729
Query: 246 HYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-NVPLL 304
+ ++ + F P V++ G D+ GD LG +S +G+A + + ++
Sbjct: 730 LAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRII 789
Query: 305 LLGGGGYTIRNVARCWCYETGVALG 329
L+ GGY + +++ T LG
Sbjct: 790 LILEGGYNLTSISESMAACTRSLLG 814
Score = 227 (85.0 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 80/307 (26%), Positives = 134/307 (43%)
Query: 24 DPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYV 81
D ++ ++ + P P R+ L GLL + A + +L H+ +Y+
Sbjct: 105 DEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYI 164
Query: 82 SFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL---CD 138
+ + T + +LR L + + + +S C A GSV V G
Sbjct: 165 DLMET-TQYMNEGELRVLA--DTYDSVYLHPNSYS-CACLASGSVLRLVDAVLGAEIRNG 220
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFY 196
+AI G HHA+ G+C N + +A ++H RVL VD D+HHG G + F
Sbjct: 221 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFD 279
Query: 197 TTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKP 251
V+ S H++ G ++P + G+ +G+ Y++NVP + G+ D Y F
Sbjct: 280 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLH 339
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGG 310
++ V F+P V++ G D+L GD G + G A+ + L+L GG
Sbjct: 340 VLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGG 399
Query: 311 YTIRNVA 317
Y +R +A
Sbjct: 400 YNLRALA 406
>RGD|619976 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0006344 "maintenance of chromatin silencing" evidence=ISO]
[GO:0006476 "protein deacetylation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0009913
"epidermal cell differentiation" evidence=ISO] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=ISO] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO;IMP] [GO:0016358 "dendrite development"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=ISO;IMP]
[GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581 "NuRD complex"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031072 "heat shock
protein binding" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0034605 "cellular response to heat" evidence=IEP]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO] [GO:0042220 "response
to cocaine" evidence=IEP] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042733 "embryonic digit morphogenesis"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=ISO] [GO:0055013 "cardiac muscle cell
development" evidence=ISO] [GO:0060044 "negative regulation of
cardiac muscle cell proliferation" evidence=ISO] [GO:0060297
"regulation of sarcomere organization" evidence=ISO] [GO:0060789
"hair follicle placode formation" evidence=ISO] [GO:0061029 "eyelid
development in camera-type eye" evidence=ISO] [GO:0061198
"fungiform papilla formation" evidence=ISO] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0090311 "regulation of protein deacetylation"
evidence=ISO] RGD:619976 GO:GO:0045892 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0034605 GO:GO:0042493 GO:GO:0042220
GO:GO:0000785 GO:GO:0031072 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 GO:GO:0010977 EMBL:AF321130 IPI:IPI00914263
UniGene:Rn.1797 ProteinModelPortal:Q99PA1 DIP:DIP-46498N
STRING:Q99PA1 PhosphoSite:Q99PA1 InParanoid:Q99PA1
Genevestigator:Q99PA1 Uniprot:Q99PA1
Length = 174
Score = 251 (93.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 51/132 (38%), Positives = 80/132 (60%)
Query: 322 YETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKL 381
YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +L E L L
Sbjct: 1 YETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRML 60
Query: 382 QHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV--DDERVK--REAVEPEQKDR 437
HAP VQ Q P D+ D EDG+ DPD + + D+R+ E + E +
Sbjct: 61 PHAPGVQMQAIPEDAV--HEDSGDEDGE---DPDKRISIRASDKRIACDEEFSDSEDEGE 115
Query: 438 EGLKGMAEQARG 449
G + +A+ +G
Sbjct: 116 GGRRNVADHKKG 127
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 273 (101.2 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 82/302 (27%), Positives = 140/302 (46%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNM----QVLKPFPARE---RDLCRFHADDYVSFLRSIT 88
HP P R+ + G + N+ V PARE +L + H+ + + + T
Sbjct: 77 HPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTN-T 135
Query: 89 PETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV---GGAVKLNHGLCDIAINWAG 145
+ + L L++ + D ++ +FC A GS AV A+
Sbjct: 136 EKMSHEDLANLEKIS---DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPP 192
Query: 146 GLHHAKKCEASGFCYVNDIVLAILELLKQH----ERVLYVDIDIHHGDGVEEAFYTTDRV 201
G HHA+ + GFC N++ + +L++ +RVL VD DIHHG+G + AFY V
Sbjct: 193 G-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNV 251
Query: 202 MTVSFHKF--GDYFPGT--GDIRDIGYSKGKFYSLNVPLD-DGIDDESYHYLFKPIIGKV 256
+ VS H++ G ++PGT G + G G ++N+P G+ D Y Y F+ ++ V
Sbjct: 252 LYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPV 311
Query: 257 MEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ CG D+ +GD +G F L+ +A + + + + GGY + +
Sbjct: 312 AYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDS 371
Query: 316 VA 317
++
Sbjct: 372 IS 373
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 280 (103.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 89/321 (27%), Positives = 145/321 (45%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
YDP + +Y + HP P R+ L GL L PA + +L H+ +Y
Sbjct: 498 YDPAMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHSAEY 557
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGG---AVKLNHGLC 137
V LR+ ++ R+ F+ CP F+ C A GSV AV L
Sbjct: 558 VGRLRATEKMKTRELHREGSNFDSIYICP---STFA-CAQLATGSVCRLVEAVLAREVLN 613
Query: 138 DIAINWAGGLHHAKKCEASGFCYVNDIVLAI--LELLKQHE-RVLYVDIDIHHGDGVEEA 194
A+ G HHA++ A GFC+ N + +A + + H R+L VD D+HHG+G +
Sbjct: 614 GTAVVRPPG-HHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHI 672
Query: 195 FYTTDRVMTVSFHKF--GDYFP-GT-GDIRDIGYSKGKFYSLNVPLDDG-IDDESYHYLF 249
F V+ +S H++ G +FP G G +G + G +++NV + + D Y +
Sbjct: 673 FEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGDADYLAAW 732
Query: 250 KPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-NVPLLLLGG 308
++ + F P V++ G D+ GD LG +S +G+A + N ++L+
Sbjct: 733 HRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRVVLILE 792
Query: 309 GGYTIRNVARCWCYETGVALG 329
GGY + +++ T LG
Sbjct: 793 GGYNLTSISESMAACTRSLLG 813
Score = 240 (89.5 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 82/308 (26%), Positives = 138/308 (44%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
+D ++ ++ + P P R+ L GLL + A + +L H+ +Y
Sbjct: 104 FDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVSFQARFAEKEELMLVHSLEY 163
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV---GGAVKLNHGLC 137
+ + + T + +LR L + + + ++ C A GSV AV N
Sbjct: 164 IDLMET-TQYMNEGELRILA--DTYDSVYLHPNSYT-CACLASGSVLRLVDAVLRNEIRN 219
Query: 138 DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAF 195
+AI G HHA+ G+C N + +A ++H ERVL VD D+HHG G + F
Sbjct: 220 GMAIVRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFTF 278
Query: 196 YTTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFK 250
V+ S H++ G ++P + IG+ +G+ Y++NVP + G+ D Y F
Sbjct: 279 DQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIAAFL 338
Query: 251 PIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GG 309
++ V F+P V++ G D+L GD G + G A+ + L+L G
Sbjct: 339 RLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAGGKLILSLEG 398
Query: 310 GYTIRNVA 317
GY +R +A
Sbjct: 399 GYNLRALA 406
Score = 42 (19.8 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDE 423
+KL+E L L+ +++ E+ P+S++PE E+ G+ D D V +E
Sbjct: 987 SKLIENLRTLEL--NIE-AEKAPESQIPE--EEGLLGEAAGGQDVDDSVLNE 1033
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 268 (99.4 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 90/322 (27%), Positives = 152/322 (47%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDL-CRFHADD 79
YD ++ +++ + HP P RI L GL + L PA + +L C H+ +
Sbjct: 486 YDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAELLC--HSAE 543
Query: 80 YVSFLRSITPETQQDQLRQLKRFNVGEDCP-VFDGLFSFCQTYAGGS--VGGAVKLNHGL 136
++ LR+ T++ + R+L+R D + F+ Q AG + + AV L
Sbjct: 544 HLERLRA----TEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVL 599
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAI--LELLKQHE-RVLYVDIDIHHGDGVEE 193
+A+ G HHA+ A GFC+ N + +A + + H R+L VD DIHHG+G +
Sbjct: 600 NGVAVVRPPG-HHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQH 658
Query: 194 AFYTTDRVMTVSFHKF--GDYFP-GT-GDIRDIGYSKGKFYSLNVPLDDG-IDDESYHYL 248
F V+ +S H++ G +FP G G IG + G +++NV + + D Y
Sbjct: 659 IFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGDADYLAA 718
Query: 249 FKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECV-KFMRSFNVPLLLLG 307
+ ++ V F P V++ G D+ GD LG +S +G+A + M N ++L+
Sbjct: 719 WHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANGHIILIL 778
Query: 308 GGGYTIRNVARCWCYETGVALG 329
GGY + +++ T LG
Sbjct: 779 EGGYNLTSISESMAACTRSLLG 800
Score = 234 (87.4 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 78/308 (25%), Positives = 140/308 (45%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
+D ++ ++ + P +P R+ L GLL + A + +L H+ +Y
Sbjct: 90 FDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEY 149
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK--LNHGLCD 138
+ + + T +++L L + + + ++ C A GSV V L + +
Sbjct: 150 IDLMET-TQYMNEEELHVLA--DTYDSVYLHPNSYT-CACLASGSVLRLVDAVLEAEIRN 205
Query: 139 -IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAF 195
+AI G HHA+ G+C N + +A ++H+ RVL VD D+HHG G++ AF
Sbjct: 206 GMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAF 264
Query: 196 YTTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFK 250
V+ S H++ G ++P + G +G+ Y++NVP + G+ D Y F
Sbjct: 265 DQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYIAAFL 324
Query: 251 PIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GG 309
++ V F+P V++ G D+L GD G + G A+ + L+L G
Sbjct: 325 HVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAEGKLILSLEG 384
Query: 310 GYTIRNVA 317
GY + ++A
Sbjct: 385 GYNLHSLA 392
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 266 (98.7 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 85/305 (27%), Positives = 136/305 (44%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
HP P RI L GL +L PA + +L H+ +YV LR+ +D
Sbjct: 502 HPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTRDL 561
Query: 96 LRQLKRFNVGEDCPVFDGLFSFCQTYAGGS--VGGAVKLNHGLCDIAINWAGGLHHAKKC 153
R+ F CP F+ Q G + + AV L IAI G HHA+
Sbjct: 562 HREGANFESIYICP---STFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPG-HHAEPD 617
Query: 154 EASGFCYVNDIVLAILE---LLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF- 209
A GFC+ N + +A + + R+L VD D+HHG+G + F V+ VS H++
Sbjct: 618 AACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYD 677
Query: 210 -GDYFP-GT-GDIRDIGYSKGKFYSLNVPLDDG-IDDESYHYLFKPIIGKVMEVFRPGAV 265
G +FP G G +G + G +++NVP + + D Y + ++ + F P V
Sbjct: 678 RGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRMGDADYLATWHRLVLPIAYEFNPELV 737
Query: 266 VLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-NVPLLLLGGGGYTIRNVARCWCYET 324
++ G D+ GD LG ++ +G+A + ++L+ GGY + +++ T
Sbjct: 738 LISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLTSISESMAACT 797
Query: 325 GVALG 329
LG
Sbjct: 798 HSLLG 802
Score = 229 (85.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 81/312 (25%), Positives = 139/312 (44%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
+D ++ +++ + P P R+ L GLL + A + +L H+ +Y
Sbjct: 89 FDEQLNDFHCLWDDSFPENPERLHAIKEQLILEGLLGRCVSFQARFAEKEELMLVHSLEY 148
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL---C 137
+ + + T + +LR L + + +S C A GSV V G
Sbjct: 149 IDLMET-TQYMNEGELRVLA--GTYDSVYLHPNSYS-CACLATGSVLRLVDAVMGAEIRN 204
Query: 138 DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAF 195
+A+ G HHA++ G+C N + +A K+H +R+L VD D+HHG G + F
Sbjct: 205 GMAVIRPPG-HHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQFIF 263
Query: 196 YTTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFK 250
V+ S H++ G ++P + G+ +G+ Y++NVP + G+ D Y F
Sbjct: 264 DQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFL 323
Query: 251 PIIGKVMEVFRPGAVVLQCGADSLSGD---RLGCFNLSIKGHAECVKFMRSFNVPLLLLG 307
I+ V F+P V++ G D+L GD R G + + G A F+ L+L
Sbjct: 324 HILLPVAFEFQPQLVLVAAGFDALHGDPKVRQGEMSATPAGFAHLTHFLMGLAGGKLILS 383
Query: 308 -GGGYTIRNVAR 318
GGY + +A+
Sbjct: 384 LEGGYNLHALAK 395
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 264 (98.0 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 87/321 (27%), Positives = 145/321 (45%)
Query: 23 YDPEVGNY--YYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
YD ++ ++ + HP P RI L GL +L PA + +L H+ +Y
Sbjct: 484 YDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEY 543
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGS---VGGAVKLNHGLC 137
V LR+ +D R+ F+ CP F+ C A G+ + AV L
Sbjct: 544 VEHLRTTEKMKTRDLHREGANFDSIYICP---STFA-CAKLATGAACRLVEAVLSGEVLN 599
Query: 138 DIAINWAGGLHHAKKCEASGFCYVNDIVLAI--LELLKQHE-RVLYVDIDIHHGDGVEEA 194
IA+ G HHA+ A GFC+ N + +A +++ R+L VD D+HHG+G +
Sbjct: 600 GIAVVRPPG-HHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHI 658
Query: 195 FYTTDRVMTVSFHKF--GDYFP-GT-GDIRDIGYSKGKFYSLNVPLDDG-IDDESYHYLF 249
F V+ VS H++ G +FP G G +G G +++NVP + + D Y +
Sbjct: 659 FEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDADYLAAW 718
Query: 250 KPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-NVPLLLLGG 308
++ + F P V++ G D+ GD LG ++ +G+A + ++L+
Sbjct: 719 HRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILE 778
Query: 309 GGYTIRNVARCWCYETGVALG 329
GGY + +++ T LG
Sbjct: 779 GGYNLASISESMAACTHSLLG 799
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 82/309 (26%), Positives = 137/309 (44%)
Query: 23 YDPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
+D ++ +++ + P P R+ L GLL + A + +L H+ +Y
Sbjct: 89 FDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVHSLEY 148
Query: 81 VSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL---C 137
+ + + T + +LR L + + +S C A GSV V G
Sbjct: 149 IDLMET-TQYMNEGELRVLAE--TYDSVYLHPNSYS-CACLATGSVLRLVDALMGAEIRN 204
Query: 138 DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAF 195
+A+ G HHA+ G+C N + +A K+H +RVL VD D+HHG G + F
Sbjct: 205 GMAVIRPPG-HHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFIF 263
Query: 196 YTTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFK 250
V+ S H++ G ++P + IG+ +G+ Y++NVP + G+ D Y F
Sbjct: 264 DQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAAFL 323
Query: 251 PIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GG 309
I+ V F+P V++ G D+L GD G + G A + L+L G
Sbjct: 324 HILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILSLEG 383
Query: 310 GYTIRNVAR 318
GY +R +A+
Sbjct: 384 GYNLRALAK 392
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 236 (88.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 73/264 (27%), Positives = 123/264 (46%)
Query: 70 RDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGA 129
+D+ D+ +S + P + L Q + CPV + + A +V GA
Sbjct: 78 KDIPEDWGDEVMSNIFVREPNALRGVLAQAACYLADGSCPVGESTWRAAYWSAQSAVAGA 137
Query: 130 VKLNHGL-CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHG 188
L G A+ G HHA+ A GFCY+N+ +A L ++ RV +D D+HHG
Sbjct: 138 QALLDGEPAAYALCRPPG-HHARSEAAGGFCYLNNAAIAAQVLRDKYARVAVLDTDMHHG 196
Query: 189 DGVEEAFYTTDRVMTVSFHKFGD---YFPGT-GDIRDIGYSKGKFYSLNVPLDDGIDDES 244
G++E FY V+ VS H GD ++PG G + G G+ Y+LN+P+ G +
Sbjct: 197 QGIQEIFYERADVLYVSVH--GDPTNFYPGVAGFAEERGAGAGEGYNLNLPMAHGASEGD 254
Query: 245 YHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLL 304
+ + + + ++ F +VL G D D ++ G A + +RS +P L
Sbjct: 255 FLARLEQAL-EAVKAFDAEVLVLSLGFDIYELDPQSKVAVTRDGFAILGQRIRSLGLPCL 313
Query: 305 LLGGGGYTIRNV---ARCWCYETG 325
++ GGY + ++ AR + ++G
Sbjct: 314 IVQEGGYHLESLEDNARAFFADSG 337
Score = 40 (19.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 31 YYGQGHPMKPHRI--RMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLR 85
YY +G P + R + A + L V +P A L H Y++FL+
Sbjct: 17 YYSRGQMRIPQEVPERAQRLVQAAHSL--GFAVEQPRDAGMAPLLAVHGAPYLAFLQ 71
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 253 (94.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 84/308 (27%), Positives = 146/308 (47%)
Query: 39 KPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQ 98
+P R+ L GL Q L P A E +L H+ +YVS LR T +LR
Sbjct: 27 RPERLTAALRRLQQGGLEQRCLQLAPREASEAELGLVHSPEYVSLLRG-TQALDTQELRA 85
Query: 99 LKRFNVGEDCPVFDGLFSFCQTY--AGGSVGGAVKLNHGLCDIAINWAGGL-----HHAK 151
L G+ +D ++ T+ A +VG A++L + A++ L HH++
Sbjct: 86 LS----GQ----YDAVYFHPSTFHCARLAVGAALQLVDAVLMGAVHNGLALVRPPGHHSQ 137
Query: 152 KCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF 209
+ A+GFC N++ +A ++H +R+L VD D+HHG G++ F V+ S+H++
Sbjct: 138 RAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRY 197
Query: 210 --GDYFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGA 264
G ++P D +G KG+ +++N+P + G+ + Y F ++ V F P
Sbjct: 198 EHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEFDPEL 257
Query: 265 VVLQCGADSLSGDRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYTIRNVARCWC 321
V++ G DS GD G + + GH + ++ + V +L GGY + ++++ C
Sbjct: 258 VLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGRVCAVL--EGGYHLESLSQSVC 315
Query: 322 YETGVALG 329
LG
Sbjct: 316 MVVRALLG 323
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 256 (95.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 68/207 (32%), Positives = 108/207 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q + L VD D+HHG+G ++AFY+ RV+ +
Sbjct: 802 HHAEESTPMGFCYFNSVAIAA-KLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYI 860
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 861 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTI 313
F P V++ G D++ G LG +NLS K K + V L L GG T
Sbjct: 921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLT- 979
Query: 314 RNVARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 980 ---AICDASEACVSALLGNELDP-LPE 1002
>UNIPROTKB|A6NGT0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00642981
ProteinModelPortal:A6NGT0 SMR:A6NGT0 STRING:A6NGT0
Ensembl:ENST00000373560 ArrayExpress:A6NGT0 Bgee:A6NGT0
Uniprot:A6NGT0
Length = 156
Score = 229 (85.7 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 46/136 (33%), Positives = 71/136 (52%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKKCE 154
+AINW+GG HHAKK E
Sbjct: 133 VAINWSGGWHHAKKYE 148
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 254 (94.5 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 71/215 (33%), Positives = 111/215 (51%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQ--H-ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q H + L VD D+HHG+G ++AFY+ V+ V
Sbjct: 770 HHAEESTPMGFCYFNSVAIAA-KLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYV 828
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 829 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 888
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTI 313
F P V++ G D++ G LG +NLS K K + V L L GG T
Sbjct: 889 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLT- 947
Query: 314 RNVARCWCYETGVA--LGVEVD---DKMPQHEYYE 343
A C E V+ LG E+D +K+ Q Y+
Sbjct: 948 ---AICDASEACVSALLGNELDPLPEKVLQQRPYD 979
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 239 (89.2 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 68/249 (27%), Positives = 112/249 (44%)
Query: 35 GHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQD 94
GH P R +L+ GL + V P E D+ R H++ Y+ ++++
Sbjct: 14 GHAESPESKRRFKSLMDVSGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLSDAGGG- 72
Query: 95 QLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD--IAINWAGGLHHAKK 152
N GE P G + AG + G D A++ G HHA +
Sbjct: 73 --------NAGEFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPG-HHAMR 123
Query: 153 CEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG 210
+ GFC + +I +AI + RV +D D+HHG+G ++ FY + V+T+S H+
Sbjct: 124 DGSMGFCLLANIAIAIEAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQEN 183
Query: 211 DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCG 270
+ PG+G + G G+ +LNV L G +SY ++ + FRP +++ CG
Sbjct: 184 CFPPGSGSGSERGAGAGEGANLNVNLLPGAGHQSYIDAMDILVLPALHAFRPELIIVACG 243
Query: 271 ADSLSGDRL 279
D+ + D L
Sbjct: 244 LDANNFDPL 252
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 253 (94.1 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 67/207 (32%), Positives = 107/207 (51%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +
Sbjct: 772 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 830
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 831 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 890
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTI 313
F P V++ G D++ G LG +NLS K K + V L L GG T
Sbjct: 891 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLT- 949
Query: 314 RNVARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 950 ---AICDASEACVSALLGNELDP-LPE 972
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 253 (94.1 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 67/207 (32%), Positives = 107/207 (51%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +
Sbjct: 780 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 838
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 839 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 898
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTI 313
F P V++ G D++ G LG +NLS K K + V L L GG T
Sbjct: 899 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLT- 957
Query: 314 RNVARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 958 ---AICDASEACVSALLGNELDP-LPE 980
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 253 (94.1 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 67/207 (32%), Positives = 107/207 (51%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +
Sbjct: 789 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 847
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 848 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 907
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTI 313
F P V++ G D++ G LG +NLS K K + V L L GG T
Sbjct: 908 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLT- 966
Query: 314 RNVARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 967 ---AICDASEACVSALLGNELDP-LPE 989
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 253 (94.1 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 67/207 (32%), Positives = 107/207 (51%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +
Sbjct: 798 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 856
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 857 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 916
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTI 313
F P V++ G D++ G LG +NLS K K + V L L GG T
Sbjct: 917 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLT- 975
Query: 314 RNVARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 976 ---AICDASEACVSALLGNELDP-LPE 998
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 252 (93.8 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 75/243 (30%), Positives = 122/243 (50%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA++ A GFC+ N + + L Q ++L VD+D+HHG+G ++AFY ++ +S
Sbjct: 782 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 841
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H++ G++FPG+G ++G G+ Y++N+ G+D D Y F+ I+ V +
Sbjct: 842 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKE 901
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYTIR 314
F P V++ G D+L G LG + ++ K GH + + + V L L GG T
Sbjct: 902 FDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAI 961
Query: 315 NVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
A C LG E++ P E D LH +P NM S Q + EI++
Sbjct: 962 CDASEAC--VNALLGNELE---PLAE-------DI-LHQSP-NMNAVISLQKIIEIQSMS 1007
Query: 375 LEY 377
L++
Sbjct: 1008 LKF 1010
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 246 (91.7 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 56/180 (31%), Positives = 96/180 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA++ A GFC+ N + + L Q ++L VD+D+HHG+G ++AFY ++ +S
Sbjct: 210 HHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 269
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H++ G++FPG+G ++G G+ Y++N+ G+D D Y F+ ++ V
Sbjct: 270 LHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVARE 329
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIK----GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D+L G LG + ++ K GH + + + + V L L GG T
Sbjct: 330 FDPDMVLVSAGFDALEGHTPPLGGYKVTAKCNGFGHLTKQLMTLANGRVALALEGGHDLT 389
>UNIPROTKB|A6ND12 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
KO:K11405 EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00645419
RefSeq:NP_001159894.1 ProteinModelPortal:A6ND12 SMR:A6ND12
STRING:A6ND12 PRIDE:A6ND12 Ensembl:ENST00000373556 UCSC:uc022byw.1
ArrayExpress:A6ND12 Bgee:A6ND12 Uniprot:A6ND12
Length = 158
Score = 226 (84.6 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/134 (33%), Positives = 70/134 (52%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKK 152
+AINW+GG HHAKK
Sbjct: 133 VAINWSGGWHHAKK 146
>UNIPROTKB|A6NJR3 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
KO:K11405 EMBL:AL133500 EMBL:BX295542 IPI:IPI00515065
UniGene:Hs.310536 DNASU:55869 GeneID:55869 KEGG:hsa:55869
HGNC:HGNC:13315 PharmGKB:PA37766 ChiTaRS:HDAC8 GenomeRNAi:55869
NextBio:61182 RefSeq:NP_001159892.1 ProteinModelPortal:A6NJR3
SMR:A6NJR3 STRING:A6NJR3 Ensembl:ENST00000373554 UCSC:uc022byx.1
BindingDB:A6NJR3 ArrayExpress:A6NJR3 Bgee:A6NJR3 Uniprot:A6NJR3
Length = 146
Score = 226 (84.6 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/134 (33%), Positives = 70/134 (52%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHAD 78
Y Y PE Y + P R M H+L+ Y L + M+++KP A ++ FH D
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 79 DYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD 138
Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C
Sbjct: 74 AYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK 132
Query: 139 IAINWAGGLHHAKK 152
+AINW+GG HHAKK
Sbjct: 133 VAINWSGGWHHAKK 146
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 257 (95.5 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 85/324 (26%), Positives = 150/324 (46%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPAR-----------ERDLCRFHADDYVSFL 84
HP P RI + L GL+ +++ +P AR E ++ H + +F+
Sbjct: 146 HPEDPRRIYYIYKELCRAGLVDDIESTRPLVARPLKRIHARNATEEEISLVHTAAHYAFV 205
Query: 85 RSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD------ 138
S T + ++L L+ D F+ L +F + SVGGA++ +
Sbjct: 206 ES-TKDMSDEELIALEHTR---DSIYFNNL-TFASSLL--SVGGAIETCLAVATRKVKNA 258
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDIDIHHGDGVEE 193
IA+ G HHA+ + GFC N++ +A + +Q +++ +D D+HHG+G+++
Sbjct: 259 IAVIRPPG-HHAEHDKTMGFCLFNNVSVAA-RVCQQRLGLSCRKIMILDWDVHHGNGIQK 316
Query: 194 AFYTTDRVMTVSFHKF--GDYFPGT--GDIRDIGYSKGKFYSLNVPL-DDGIDDESYHYL 248
AFY V+ +S H + G ++PG GD G G+ ++N+P G+ D Y Y
Sbjct: 317 AFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPWPSQGMGDGDYIYA 376
Query: 249 FKPIIGKVMEVFRPGAVVLQCGADSLSGDRLG-CF-NLSIKGH-AECVKFMRSFNVPLLL 305
F ++ + + F P V++ G D+ +GD LG CF + H + + V + L
Sbjct: 377 FHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHMLMTLAQGKVAVCL 436
Query: 306 LGGGGYTIRNVARCWCYETGVALG 329
GGY R++++ T +G
Sbjct: 437 --EGGYNFRSISKSALAVTKTLMG 458
Score = 37 (18.1 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 409 DERWDPDSDMDVDDERVKREAVEPEQK 435
++R +P+S+ +++ VKR + K
Sbjct: 738 EDRIEPESEETEEEKPVKRSPTKAAPK 764
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 251 (93.4 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 76/255 (29%), Positives = 126/255 (49%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +
Sbjct: 795 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 853
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 854 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 913
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ G D++ G LG +NLS K K + ++L GG+ +
Sbjct: 914 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDL-- 971
Query: 316 VARCWCYETGVA--LGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
A C E V+ LG E++ P P+ LH P N N+ +E++
Sbjct: 972 TAICDASEACVSALLGNELE---PL--------PEKVLHQRP----NANAVHSMEKVMGI 1016
Query: 374 LLEYLSKLQH-APSV 387
EY LQ +P+V
Sbjct: 1017 HSEYWRCLQRLSPTV 1031
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 247 (92.0 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 63/205 (30%), Positives = 109/205 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY+ V+ +
Sbjct: 386 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 444
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 445 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 504
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ G D++ G LG +NLS + K + ++L GG+ +
Sbjct: 505 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDL-- 562
Query: 316 VARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 563 TAICDASEACVSALLGNELDP-LPE 586
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 250 (93.1 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 56/178 (31%), Positives = 97/178 (54%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA++ A GFC+ N + + L Q ++L VD+D+HHG+G ++AFY ++ +S
Sbjct: 784 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 843
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H++ G++FPG+G ++G G+ Y++N+ G+D D Y F+ ++ V +
Sbjct: 844 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKE 903
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D+L G LG + ++ K GH + + + +V L L GG T
Sbjct: 904 FDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLTKQLMTLADGHVVLALEGGHDLT 961
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 248 (92.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 63/200 (31%), Positives = 105/200 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA A GFC+ N + +A +L +QH ++L VD D+HHG+G ++ FY RV+ +
Sbjct: 650 HHADHSTAMGFCFFNSVAIACRQL-QQHGKASKILIVDWDVHHGNGTQQTFYQDPRVLYI 708
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ +
Sbjct: 709 SLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAR 768
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ G D+ G LG +++S K + + S ++L GG+ +
Sbjct: 769 EFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDL-- 826
Query: 316 VARCWCYETGVA--LGVEVD 333
A C E VA LG +VD
Sbjct: 827 TAICDASEACVAALLGNKVD 846
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 243 (90.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 61/199 (30%), Positives = 104/199 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA A GFC+ N + +A +L +Q + ++L VD D+HHG+G ++ FY V+ +S
Sbjct: 705 HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTFYQDPNVLYIS 764
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ +
Sbjct: 765 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 824
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRNV 316
F P V++ G D+ G LG +++S K + + S ++L GG+ +
Sbjct: 825 FSPDLVLVSAGFDAAEGHPPPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDL--T 882
Query: 317 ARCWCYETGVA--LGVEVD 333
A C E VA LG +VD
Sbjct: 883 AICDASEACVAALLGNKVD 901
Score = 52 (23.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 23/77 (29%), Positives = 32/77 (41%)
Query: 2 DTGGNSLPSGTDGVKRKVCYFYDPEVG-NYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ 60
+T G+S PS + D E G N G + R+R+ LA + LL +
Sbjct: 233 ETLGDSSPSSSSTPASGCSSPNDSEHGPNPVLGS-EALLGQRLRLQETSLAPFALLPTIT 291
Query: 61 VLKPFPARERDLCRFHA 77
+ P PAR R HA
Sbjct: 292 LGLPAPARADGDRRTHA 308
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 247 (92.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 73/248 (29%), Positives = 123/248 (49%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +
Sbjct: 794 HHAEESTPMGFCYFNSVAVAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 852
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G++ D Y F+ ++ +
Sbjct: 853 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIAN 912
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ G D++ G LG +NLS K K + L+L GG+ +
Sbjct: 913 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRLVLALEGGHDL-- 970
Query: 316 VARCWCYETGVA--LGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
A C E V+ LG E++ P P+ LH P N +S + + +I +K
Sbjct: 971 TAICDASEACVSALLGNELE---PL--------PEKVLHQRP-NANAVHSMEKVMDIHSK 1018
Query: 374 LLEYLSKL 381
L +L
Sbjct: 1019 YWRCLQRL 1026
>UNIPROTKB|E5RGV4 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00978755 ProteinModelPortal:E5RGV4 SMR:E5RGV4
Ensembl:ENST00000518690 ArrayExpress:E5RGV4 Bgee:E5RGV4
Uniprot:E5RGV4
Length = 71
Score = 220 (82.5 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 36/71 (50%), Positives = 53/71 (74%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR 97
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 98 QLKRFNVGEDC 108
Q++RFNVGEDC
Sbjct: 61 QMQRFNVGEDC 71
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 243 (90.6 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 75/305 (24%), Positives = 142/305 (46%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQL 99
P R+ +++ L +GL Q + + A E+++ H+++Y+ ++ TP ++L
Sbjct: 83 PERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLAHSEEYLEAVKQ-TPGMNVEELMAF 141
Query: 100 -KRFNVGEDCPVFDGLFSFCQTYAGGS---VGGAVK--LNHGLCDIAINWAGGLHHAKKC 153
K++N D ++ + AG + V +K + +G+ + G HH+++
Sbjct: 142 SKKYN---DVYFHQNIYHCAKLAAGATLQLVDSVMKREVRNGMA--LVRPPG--HHSQRS 194
Query: 154 EASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG- 210
A+GFC N++ +A L K + R+L VD D+HHG G++ F V+ S+H++
Sbjct: 195 AANGFCVFNNVAIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEH 254
Query: 211 -DYFPGT--GDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVV 266
++P D +G KG +++N+P + G+ + Y F ++ V F P V+
Sbjct: 255 QSFWPNLPESDYSSVGKGKGSGFNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELVI 314
Query: 267 LQCGADSLSGDRLG--CFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYET 324
+ G DS GD G C I H + + ++L GG Y + ++ + C
Sbjct: 315 VSAGFDSAIGDPEGEMCALPEIFAHLTHLLMPLAAGKMCVVLEGG-YNLTSLGQSVCQTV 373
Query: 325 GVALG 329
LG
Sbjct: 374 HSLLG 378
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 243 (90.6 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 71/241 (29%), Positives = 120/241 (49%)
Query: 66 PARE---RDLCRFHADDYVSFLRSITPETQQDQLRQL-KRFNVGEDCPVFDGLFSFCQTY 121
PARE ++C H + +++ ++ + QLR+L K + G+ V+ G +F +
Sbjct: 147 PAREATKEEICLVHYAKHYDWVKELSTKPTA-QLRRLTKELDKGQTS-VYVGSLTFEASL 204
Query: 122 --AGGSVGGAVKLNHGLCD--IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-- 175
AGG++ + G A+ G HHA++ A GFC N++ +A ++
Sbjct: 205 ISAGGAIETCKSIVSGQIKNGFAVIRPPG-HHAEQDSAMGFCIFNNVPIAAKVCQAEYPE 263
Query: 176 --ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH--KFGDYFPGT--------GDIRDIG 223
++VL +D D+HHG+G++ FY V+ +S H K G+++PG G I G
Sbjct: 264 ICQKVLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCG 323
Query: 224 YSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLG-C 281
G ++N+ DD G+ D Y F+ II + F P V++ G D+ +GD+LG C
Sbjct: 324 SGPGLGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQLGGC 383
Query: 282 F 282
F
Sbjct: 384 F 384
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 241 (89.9 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 372 HHAEESTAMGFCFFNSVAITT-KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 430
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 431 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 490
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 491 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 549
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 236 (88.1 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 68/242 (28%), Positives = 115/242 (47%)
Query: 148 HHAKKCEAS--GFCYVNDIVLAI--LELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMT 203
HHA + GFC +N++ + + L +K +++ +D D+HHGDG ++ FY V+
Sbjct: 107 HHATRTVYGNRGFCNINNVAITVDYLRWVKGVKKIAIIDTDVHHGDGTQDIFYHDPDVLF 166
Query: 204 VSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRP 262
+S H+ G +PGTG I + G ++N+PL G DE YL + + ++E F+P
Sbjct: 167 ISLHQDGRTLYPGTGFIDEAGTPNAYGTTINLPLPPGSGDEEILYLLEEAVLPILEEFQP 226
Query: 263 GAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCY 322
++ G D+ D L ++ +G+ + ++ P L + GGY+I
Sbjct: 227 EFIINSAGQDNHYSDPLARMAVTARGYGRITELIK----PDLAVLEGGYSIEGALPYVNL 282
Query: 323 ETGVALGVEVDDKM--PQHEYYEYFG--PDYTLHVAPSNMENKNSRQ-LLEEIRNKLLEY 377
+AL E +K+ P+ EY DY +A +E R+ L EE + K Y
Sbjct: 283 AILLALYGESYEKVVEPKGLPLEYRARHKDYAKKLAAVTLERWRMREELAEEEKRKHNGY 342
Query: 378 LS 379
S
Sbjct: 343 YS 344
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 250 (93.1 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 64/205 (31%), Positives = 107/205 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q + L VD D+HHG+G ++AFY V+ +
Sbjct: 801 HHAEESTPMGFCYFNSVAIAA-KLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYI 859
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 860 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 919
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ G D++ G LG +NLS K K + ++L GG+ +
Sbjct: 920 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDL-- 977
Query: 316 VARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 978 TAICDASEACVSALLGNELDP-LPE 1001
Score = 40 (19.1 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 51 AHYGLLQNMQVLKPFPAR 68
AH LLQ+M +L+ PA+
Sbjct: 409 AHNPLLQHMVLLEQTPAQ 426
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 243 (90.6 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 58/179 (32%), Positives = 97/179 (54%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 823 HHAEESTAMGFCFFNSVAITA-KLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 881
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ + +
Sbjct: 882 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQ 941
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 942 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 1000
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 240 (89.5 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 536 HHAEESTAMGFCFFNSVAITA-KLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYI 594
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 595 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 654
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 655 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 713
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 240 (89.5 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 618 HHAEESTAMGFCFFNSVAITA-KLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYI 676
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 677 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 736
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 737 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 795
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 240 (89.5 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 618 HHAEESTAMGFCFFNSVAITA-KLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYI 676
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 677 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 736
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 737 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 795
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 241 (89.9 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 821 HHAEESTAMGFCFFNSVAITA-KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYI 879
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 880 SLHRYDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 939
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 940 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 998
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 240 (89.5 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 62/200 (31%), Positives = 103/200 (51%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA A GFC+ N + +A +L +QH ++L VD D+HHG+G ++ FY V+ +
Sbjct: 656 HHADHSTAMGFCFFNSVAIACRQL-QQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYI 714
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ +
Sbjct: 715 SLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAR 774
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVK-FMRSFNVPLLLLGGGGYTIRN 315
F P V++ G D+ G LG +++S K + M ++L GG+ +
Sbjct: 775 EFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDL-- 832
Query: 316 VARCWCYETGVA--LGVEVD 333
A C E VA LG +VD
Sbjct: 833 TAICDASEACVAALLGNKVD 852
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 240 (89.5 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 60/199 (30%), Positives = 104/199 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA A GFC+ N + +A +L +Q + ++L +D D+HHG+G ++ FY V+ +S
Sbjct: 668 HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDVHHGNGTQQTFYQDPSVLYIS 727
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ +
Sbjct: 728 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIARE 787
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRNV 316
F P V++ G D+ G LG +++S K + + S ++L GG+ +
Sbjct: 788 FSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDL--T 845
Query: 317 ARCWCYETGVA--LGVEVD 333
A C E VA LG +VD
Sbjct: 846 AICDASEACVAALLGNKVD 864
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 240 (89.5 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 54/176 (30%), Positives = 94/176 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA A GFC+ N + +A +L +Q + ++L VD D+HHG+G ++ FY V+ +S
Sbjct: 669 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 728
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ +
Sbjct: 729 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 788
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
F P V++ G D+ G LG +++S A+C +M L+ L GG +
Sbjct: 789 FSPDLVLVSAGFDAAEGHPAPLGGYHVS----AKCFGYMTQ---QLMNLAGGAVVL 837
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 240 (89.5 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 54/176 (30%), Positives = 94/176 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA A GFC+ N + +A +L +Q + ++L VD D+HHG+G ++ FY V+ +S
Sbjct: 725 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 784
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ +
Sbjct: 785 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 844
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
F P V++ G D+ G LG +++S A+C +M L+ L GG +
Sbjct: 845 FSPDLVLVSAGFDAAEGHPAPLGGYHVS----AKCFGYMTQ---QLMNLAGGAVVL 893
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 241 (89.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 832 HHAEESTAMGFCFFNSVAITA-KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 890
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 891 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 950
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 951 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 1009
Score = 46 (21.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 380 KLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDREG 439
+LQ Q++P + + ++ E + W R REA E ++ E
Sbjct: 1026 ELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQKFAAGLGRSLREAQAGETEEAET 1085
Query: 440 LKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQE 480
+ MA + G A+ + + + S P +EP +EQE
Sbjct: 1086 VSAMALLSVG----AEQAQAAAAREHSPRPAEEP---MEQE 1119
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 241 (89.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 835 HHAEESTAMGFCFFNSVAITT-KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 893
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 894 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 953
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 954 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 1012
Score = 45 (20.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 380 KLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDREG 439
+LQ Q++P + + ++ E + W R REA E ++ E
Sbjct: 1029 ELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAET 1088
Query: 440 LKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQE 480
+ MA + G A+ + + + S P +EP +EQE
Sbjct: 1089 VSAMALLSVG----AEQAQAAAAREHSPRPAEEP---MEQE 1122
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 247 (92.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 63/205 (30%), Positives = 109/205 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY+ V+ +
Sbjct: 802 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 860
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ +
Sbjct: 861 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ G D++ G LG +NLS + K + ++L GG+ +
Sbjct: 921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDL-- 978
Query: 316 VARCWCYETGVA--LGVEVDDKMPQ 338
A C E V+ LG E+D +P+
Sbjct: 979 TAICDASEACVSALLGNELDP-LPE 1002
Score = 38 (18.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 51 AHYGLLQNMQVLKPFPAR 68
AH LLQ+M +L+ PA+
Sbjct: 409 AHSPLLQHMVLLEQPPAQ 426
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 238 (88.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 61/200 (30%), Positives = 104/200 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY+ V+ +
Sbjct: 741 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYL 799
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G +++N+ G++ D Y F ++ +
Sbjct: 800 SLHRYDDGNFFPGSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGDADYLAAFTSVVMPIAN 859
Query: 259 VFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRN 315
F P V++ G D++ G LG + L+ K K + L+L GG+ +
Sbjct: 860 EFSPDVVLVSSGFDAVEGHPPPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDL-- 917
Query: 316 VARCWCYETGVA--LGVEVD 333
A C E V+ LG E+D
Sbjct: 918 TAICDASEACVSALLGNELD 937
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 240 (89.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 800 HHAEESTAMGFCFFNSVAITT-KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 858
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 859 SLHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 918
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 919 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 977
Score = 45 (20.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 380 KLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDREG 439
+LQ Q++P + + ++ E + W R REA E ++ E
Sbjct: 994 ELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAET 1053
Query: 440 LKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQE 480
+ MA + G A+ + + + S P +EP +EQE
Sbjct: 1054 VSAMALLSVG----AEQAQAAAAREHSPRPAEEP---MEQE 1087
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 234 (87.4 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 86/318 (27%), Positives = 154/318 (48%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARE---RDLCRFHADDYVSFLRSITPETQQDQL 96
P R+ ++ L Y L++ P PARE ++ H+ +++ +S +T ++
Sbjct: 30 PERLSASYEQLQCYHLVERCV---PVPAREGSEEEILLVHSSEHLEAAKST--QTMNEE- 83
Query: 97 RQLKRFNVGEDCPVFDGLFSFCQTY--AGGSVGGAVKL-----NHGLCD-IAINWAGGLH 148
+LKR + G +D F TY A +VG A++L + +C+ +A+ G H
Sbjct: 84 -ELKRIS-GN----YDSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-H 136
Query: 149 HAKKCEASGFCYVNDIVLAI-LELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 206
H+++ A+GFC N++ +A LK +R+L VD D+HHG G + F V+ S+
Sbjct: 137 HSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSW 196
Query: 207 HKFG--DYFPGT--GDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFR 261
H++ +++P D +G KGK +++N+P + G+ + Y F ++ V F
Sbjct: 197 HRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFEFD 256
Query: 262 PGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKF-MRSFNVPLLLLGGGGYTIRNVARCW 320
P V++ G DS GD G N + + A F M+ + L ++ GGY +++++
Sbjct: 257 PELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKLCVILEGGYHLKSLSESV 316
Query: 321 CYETGVALGVEVDDKMPQ 338
C L D +PQ
Sbjct: 317 CMTVKTLLR----DPLPQ 330
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 240 (89.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 827 HHAEESTAMGFCFFNSVAITT-KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 885
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 886 SLHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 945
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 946 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 1004
Score = 45 (20.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 380 KLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDREG 439
+LQ Q++P + + ++ E + W R REA E ++ E
Sbjct: 1021 ELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAET 1080
Query: 440 LKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQE 480
+ MA + G A+ + + + S P +EP +EQE
Sbjct: 1081 VSAMALLSVG----AEQAQAAAAREHSPRPAEEP---MEQE 1114
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 239 (89.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
HHA++ A GFC+ N + + +LL+Q +VL VD DIHHG+G ++AFY V+ +
Sbjct: 832 HHAEESTAMGFCFFNSVAITA-KLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 890
Query: 205 SFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVME 258
S H++ G++FPG+G ++G G Y++NV G+D D Y F+ ++ +
Sbjct: 891 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAH 950
Query: 259 VFRPGAVVLQCGADSLSG--DRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYT 312
F P V++ G D++ G LG ++++ + GH + + V L L GG T
Sbjct: 951 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT 1009
Score = 46 (21.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 380 KLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDREG 439
+LQ Q++P + + ++ E + W R REA E ++ E
Sbjct: 1026 ELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQKFAAGLGRSLREAQAGETEEAET 1085
Query: 440 LKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQE 480
+ MA + G A+ + + + S P +EP +EQE
Sbjct: 1086 VSAMALLSVG----AEQAQAAAAREHSPRPAEEP---MEQE 1119
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 236 (88.1 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 85/308 (27%), Positives = 143/308 (46%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA++ A GFC+ N I + L + ++L VD+D+HHG+G ++AFY ++ VS
Sbjct: 783 HHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVS 842
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H++ G++FPG+G ++G G+ +++N+ G+D D Y F+ +I
Sbjct: 843 LHRYDEGNFFPGSGAPNEVGSGPGEGFNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANE 902
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIK--GHA--ECVKFMRSFNVPLLLLGGGGYTI 313
F P V++ G D++ G LG + ++ K GH + +K + V L L GG T
Sbjct: 903 FDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLLK-LADGRVVLALEGGHDLTA 961
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
A C LG E++ P P+ +H P NM S + EI++K
Sbjct: 962 ICDASEACINA--LLGNELE---PL--------PEDIVHQIP-NMNAIASLKKTTEIQSK 1007
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERV-----KRE 428
+ SV+ P D L E+ + + + E + + VD E+ R
Sbjct: 1008 YWK---------SVEPYSVPVDCALAESQKREREETETVSAMASLSVDVEQCFPQEGSRA 1058
Query: 429 AVEPEQKD 436
A EP +++
Sbjct: 1059 AGEPMEEE 1066
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 233 (87.1 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 89/317 (28%), Positives = 136/317 (42%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPF-PARERDLCRFHADDYVSFLRSITPETQQD 94
HP RI L +L+ VL F + DL H V L +TQ+D
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 95 QLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL-NHGLCDIAINWAGGL----HH 149
Q ++++ VF F A V L N + + A N + HH
Sbjct: 94 INSQCEKYD-----SVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHH 148
Query: 150 AKKCEASGFCYVNDIVLAILE-LLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
A GFC N++ A E ER+L VD+D+HHG G + FY RV+ S H+
Sbjct: 149 ADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHR 208
Query: 209 F--GDYFPGT--GDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPG 263
G ++P D IG KG Y+ N+ L++ G D Y + ++ + F P
Sbjct: 209 HEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPH 268
Query: 264 AVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTIRNVA--R 318
V++ G D+L GD LG L+ G++ + ++S + ++L GG + I VA R
Sbjct: 269 FVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAVQR 328
Query: 319 CWCYETGVA-LGVEVDD 334
C G A +E+++
Sbjct: 329 CVRVLLGYAPFSIELNE 345
Score = 231 (86.4 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 89/339 (26%), Positives = 150/339 (44%)
Query: 3 TGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQ-GHPMKPHRIRMTHALLAHYGLLQNMQV 61
T + +P T+ ++ + YF + + ++ + HP KP R R L G+L+
Sbjct: 417 TASDVIP--TENMETLI-YFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVD 473
Query: 62 LK-PFPARERDLCRFHADDYVSFLRSITPETQQDQ--LRQL-KRFNVGEDCPVFDGLFSF 117
A ++ H + LR T ET +D+ + + K FN +
Sbjct: 474 RNCERIATNEEIRLVHTKKMLEHLR--TTETMKDEELMEEAEKEFN---SIYLTRDTLKV 528
Query: 118 CQTYAGG---SVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQ 174
+ G SV + + G + + HHA ++SGFC N++ +A ++
Sbjct: 529 ARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRR 588
Query: 175 HE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFP-GTG-DIRDIGYSKGK 228
H+ RVL +D D+HHG+G +E FY VM +S H+ G+++P G D D+G G+
Sbjct: 589 HKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGE 648
Query: 229 FYSLNVPLDDGID--DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSI 286
S+NVP G+ D Y F+ +I + F P V++ G D+ D LG + ++
Sbjct: 649 GMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTP 707
Query: 287 KGHAECVKFMRSF---NVPLLLLGGGGYT-IRNVARCWC 321
+ A + S + +L GG T I N A+ C
Sbjct: 708 ETFALMTYQLSSLAGGRIITVLEGGYNLTSISNSAQAVC 746
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 233 (87.1 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 89/317 (28%), Positives = 136/317 (42%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPF-PARERDLCRFHADDYVSFLRSITPETQQD 94
HP RI L +L+ VL F + DL H V L +TQ+D
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 95 QLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL-NHGLCDIAINWAGGL----HH 149
Q ++++ VF F A V L N + + A N + HH
Sbjct: 94 INSQCEKYD-----SVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHH 148
Query: 150 AKKCEASGFCYVNDIVLAILE-LLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
A GFC N++ A E ER+L VD+D+HHG G + FY RV+ S H+
Sbjct: 149 ADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHR 208
Query: 209 F--GDYFPGT--GDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPG 263
G ++P D IG KG Y+ N+ L++ G D Y + ++ + F P
Sbjct: 209 HEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPH 268
Query: 264 AVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTIRNVA--R 318
V++ G D+L GD LG L+ G++ + ++S + ++L GG + I VA R
Sbjct: 269 FVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAVQR 328
Query: 319 CWCYETGVA-LGVEVDD 334
C G A +E+++
Sbjct: 329 CVRVLLGYAPFSIELNE 345
Score = 231 (86.4 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 89/339 (26%), Positives = 150/339 (44%)
Query: 3 TGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQ-GHPMKPHRIRMTHALLAHYGLLQNMQV 61
T + +P T+ ++ + YF + + ++ + HP KP R R L G+L+
Sbjct: 417 TASDVIP--TENMETLI-YFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVD 473
Query: 62 LK-PFPARERDLCRFHADDYVSFLRSITPETQQDQ--LRQL-KRFNVGEDCPVFDGLFSF 117
A ++ H + LR T ET +D+ + + K FN +
Sbjct: 474 RNCERIATNEEIRLVHTKKMLEHLR--TTETMKDEELMEEAEKEFN---SIYLTRDTLKV 528
Query: 118 CQTYAGG---SVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQ 174
+ G SV + + G + + HHA ++SGFC N++ +A ++
Sbjct: 529 ARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRR 588
Query: 175 HE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFP-GTG-DIRDIGYSKGK 228
H+ RVL +D D+HHG+G +E FY VM +S H+ G+++P G D D+G G+
Sbjct: 589 HKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGE 648
Query: 229 FYSLNVPLDDGID--DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSI 286
S+NVP G+ D Y F+ +I + F P V++ G D+ D LG + ++
Sbjct: 649 GMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTP 707
Query: 287 KGHAECVKFMRSF---NVPLLLLGGGGYT-IRNVARCWC 321
+ A + S + +L GG T I N A+ C
Sbjct: 708 ETFALMTYQLSSLAGGRIITVLEGGYNLTSISNSAQAVC 746
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 231 (86.4 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 52/176 (29%), Positives = 92/176 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA A GFC+ N + +A +L ++ + ++L VD D+HHG+G ++ FY V+ +S
Sbjct: 668 HHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYIS 727
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEV 259
H+ G++FPG+G ++G G+ +++N+ G+D D Y F+ ++ +
Sbjct: 728 LHRHDDGNFFPGSGAADEVGAGPGEGFNVNIAWTGGLDPPMGDPEYLAAFRTVVMPIAHE 787
Query: 260 FRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
F P V++ G D+ G LG + +S A+C +M L+ L GG +
Sbjct: 788 FSPDVVLVSAGFDAADGHPPPLGGYKVS----AKCFGYMTK---QLMSLAGGAIVL 836
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 231 (86.4 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 89/339 (26%), Positives = 150/339 (44%)
Query: 3 TGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQ-GHPMKPHRIRMTHALLAHYGLLQNMQV 61
T + +P T+ ++ + YF + + ++ + HP KP R R L G+L+
Sbjct: 415 TASDVIP--TENMETLI-YFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVD 471
Query: 62 LK-PFPARERDLCRFHADDYVSFLRSITPETQQDQ--LRQL-KRFNVGEDCPVFDGLFSF 117
A ++ H + LR T ET +D+ + + K FN +
Sbjct: 472 RNCERIATNEEIRLVHTKKMLEHLR--TTETMKDEELMEEAEKEFN---SIYLTRDTLKV 526
Query: 118 CQTYAGG---SVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQ 174
+ G SV + + G + + HHA ++SGFC N++ +A ++
Sbjct: 527 ARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRR 586
Query: 175 HE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFP-GTG-DIRDIGYSKGK 228
H+ RVL +D D+HHG+G +E FY VM +S H+ G+++P G D D+G G+
Sbjct: 587 HKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGE 646
Query: 229 FYSLNVPLDDGID--DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSI 286
S+NVP G+ D Y F+ +I + F P V++ G D+ D LG + ++
Sbjct: 647 GMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTP 705
Query: 287 KGHAECVKFMRSF---NVPLLLLGGGGYT-IRNVARCWC 321
+ A + S + +L GG T I N A+ C
Sbjct: 706 ETFALMTYQLSSLAGGRIITVLEGGYNLTSISNSAQAVC 744
Score = 230 (86.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 88/319 (27%), Positives = 136/319 (42%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPF-PARERDLCRFHADDYVSFLRSITPETQQD 94
HP RI L +L+ VL F + DL H V L +TQ+D
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 95 QLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGA-VK--LNHGLCDIAINWAGGL---- 147
+ C +D +F + G A V+ N + + A N +
Sbjct: 94 ---------INSQCEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPG 144
Query: 148 HHAKKCEASGFCYVNDIVLAILE-LLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 206
HHA GFC N++ A E ER+L VD+D+HHG G + FY RV+ S
Sbjct: 145 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 204
Query: 207 HKF--GDYFPGT--GDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFR 261
H+ G ++P D IG KG Y+ N+ L++ G D Y + ++ + F
Sbjct: 205 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 264
Query: 262 PGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF---NVPLLLLGGGGYTIRNVA- 317
P V++ G D+L GD LG L+ G++ + ++S + ++L GG + I VA
Sbjct: 265 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 324
Query: 318 -RCWCYETGVA-LGVEVDD 334
RC G A +E+++
Sbjct: 325 QRCVRVLLGYAPFSIELNE 343
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 228 (85.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 54/197 (27%), Positives = 105/197 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE----RVLYVDIDIHHGDGVEEAFYTTDRVMT 203
HHA+ +A GFC+ N++ +A+ L ++ ++ +D D+HHG+G + +F V+
Sbjct: 607 HHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLY 666
Query: 204 VSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLD-DGIDDESYHYLFKPIIGKVMEVF 260
+S H+ G++FPGTG + ++G + K ++NVP D + D Y ++ +I VM F
Sbjct: 667 MSLHRHDKGNFFPGTGSVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMASF 726
Query: 261 RPGAVVLQCGADSLSG--DRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRNVA 317
P +++ G D+ G + LG + ++ + K + ++ ++L GGY +++++
Sbjct: 727 CPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKSLLNYASGKVVLALEGGYDLKSIS 786
Query: 318 RCWCYETGVALGVEVDD 334
+ AL E DD
Sbjct: 787 EA-AQQCVQALIGESDD 802
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 202 (76.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 34/98 (34%), Positives = 61/98 (62%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA++ A GFC+ N + + L Q ++L VD+D+HHG+G ++AFY ++ +S
Sbjct: 13 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 72
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID 241
H++ G++FPG+G ++G G+ Y++N+ G+D
Sbjct: 73 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 110
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 84/305 (27%), Positives = 135/305 (44%)
Query: 44 RMTHAL--LAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKR 101
R+T AL L GL Q L A E +L H+ +YVS +R ETQ +L+
Sbjct: 30 RLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVR----ETQVLGKEELQA 85
Query: 102 FNVGEDCPVFDGLFSFCQTYAGGS---VGGAVKLNHGLCDIAINWAGGLHHAKKCEASGF 158
+ D F C A G+ + AV +A+ G HH ++ A+GF
Sbjct: 86 LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRAAANGF 144
Query: 159 CYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFP 214
C N++ +A ++H R+L VD D+HHG G++ F V+ S+H++ G ++P
Sbjct: 145 CVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWP 204
Query: 215 --GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGA 271
D +G +G +++N+P + G+ + Y F ++ + F P V++ G
Sbjct: 205 FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGF 264
Query: 272 DSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG-------GGYTIRNVARCWCYET 324
DS GD G ++ EC F + +L GG GGY + ++A C
Sbjct: 265 DSAIGDPEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTV 318
Query: 325 GVALG 329
LG
Sbjct: 319 QTLLG 323
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 221 (82.9 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 70/272 (25%), Positives = 120/272 (44%)
Query: 67 ARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV 126
A E ++ H YV ++S T + Q ++ ED V + + AG S+
Sbjct: 59 AEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKY---EDIYVNSATWHRAKLAAGASI 115
Query: 127 GGAVKLNHGLCD-IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDI 185
+ IA G HHA E GFC N++ +A ++ ++VL VD D+
Sbjct: 116 DLMTSVMAAKRPGIAFIRPPG-HHAMPDEGCGFCIFNNVAIAAKAAIQNGQKVLIVDYDV 174
Query: 186 HHGDGVEEAFYTTDR--VMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDD-GI 240
H G+G +E V +S H++ G ++P ++ G ++N+PL+ G+
Sbjct: 175 HAGNGTQECVEQMGEGNVQLISIHRYENGHFWP---NMPQTGIYHNYKNTINLPLNTIGL 231
Query: 241 DDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
D YH LF II + F+P +++ G D+ GD G ++ G A ++ +
Sbjct: 232 TDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLIDTG 291
Query: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEV 332
+P+ L GGY + +A + LG E+
Sbjct: 292 IPVAALLEGGYFLDALAADSEWVLRALLGEEI 323
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 223 (83.6 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 81/308 (26%), Positives = 144/308 (46%)
Query: 44 RMTHAL--LAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQL-K 100
R+T AL L GL + L A E +L H+ +Y++ ++ T +++L L K
Sbjct: 30 RLTAALDGLRQRGLEERCLCLSACEASEEELGLVHSPEYIALVQK-TQTLDKEELHALSK 88
Query: 101 RFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGL-----HHAKKCEA 155
++N P D C A G+ A++L + A++ L HH+++ A
Sbjct: 89 QYNAVYFHP--DTFH--CARLAAGA---ALQLVDAVLTGAVHNGLALVRPPGHHSQRAAA 141
Query: 156 SGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GD 211
+GFC N++ LA +++ +R+L VD D+HHG G++ F V+ S+H++ G
Sbjct: 142 NGFCVFNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGS 201
Query: 212 YFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVVLQ 268
++P D +G +G+ +++N+P + G+ + Y F ++ + F P V++
Sbjct: 202 FWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVS 261
Query: 269 CGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG-------GGYTIRNVARCWC 321
G DS GD G ++ EC F + +L GG GGY + ++A+ C
Sbjct: 262 AGFDSAIGDPEG----QMQATPEC--FAHLTQLLQVLAGGRICAVLEGGYHLESLAQSVC 315
Query: 322 YETGVALG 329
LG
Sbjct: 316 MMVQTLLG 323
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 223 (83.6 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 82/307 (26%), Positives = 138/307 (44%)
Query: 44 RMTHAL--LAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKR 101
R+T AL L +GL Q L A E +L H+ +YV+ L+ TQ R+L+
Sbjct: 30 RLTTALERLQQHGLKQRCLQLVAREASEAELGLVHSPEYVALLQG----TQALGTRELQA 85
Query: 102 FNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGL-----HHAKKCEAS 156
+ D C A VG A++L + A+ L HH+++ A+
Sbjct: 86 LSKEYDAVYLHPSTFHCARLA---VGAALQLVDAVLTGAVRNGLALVRPPGHHSQRATAN 142
Query: 157 GFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDY 212
GFC N++ +A ++H R+L VD D+HHG G++ F V+ S+H++ G +
Sbjct: 143 GFCVFNNVAIAAKHAQQKHGLRRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHF 202
Query: 213 FP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVVLQC 269
+P D +G +G +++N+P + G+ + Y F ++ + F P V++
Sbjct: 203 WPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAAFLHVLLPLAFEFDPELVLVSA 262
Query: 270 GADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG-------GGYTIRNVARCWCY 322
G DS GD G + EC F ++ +L GG GGY + ++++ C
Sbjct: 263 GFDSAIGDPEG----QMLATPEC--FAHLTHLLQVLAGGRVCAVLEGGYHLESLSQSVCM 316
Query: 323 ETGVALG 329
LG
Sbjct: 317 MVRALLG 323
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 217 (81.4 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 78/290 (26%), Positives = 120/290 (41%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
HP + L G L+ +++P A + DL H+++Y++ L+S + +
Sbjct: 93 HPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITE 152
Query: 96 LRQLKRF-NVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCE 154
+ + F N V L+ F + G + + G AIN GG HH
Sbjct: 153 VAPVAFFPNFLVQQKV---LYPFRKQVGGTILAAKLATERGW---AINIGGGFHHCTAER 206
Query: 155 ASGFCYVNDIVLAI-LELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY 212
GFC DI L I L+ RV+ +D+D H G+G E +RV + Y
Sbjct: 207 GGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDM-----Y 261
Query: 213 FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGAD 272
P +I Y +F V + G + Y + F+P V+ G D
Sbjct: 262 NP---EIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTD 318
Query: 273 SLSGDRLGCFNLS---IKGHAECV-KFMRSFNVPLLLLGGGGYTIRNVAR 318
L GD LG +S I E V +F R N+PL++L GGY +++ AR
Sbjct: 319 ILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGY-MKSSAR 367
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 216 (81.1 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 86/305 (28%), Positives = 132/305 (43%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y P + G + HP + +LL LL + +++ A + DL H Y
Sbjct: 19 YSPRYNITFLGLEKLHPFDAGKWGKVISLLKEEKLLSDSMLVEAREASDEDLLVVHTRRY 78
Query: 81 VSFLR---SITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGL 136
++ L+ ++ T+ + L F V V L +T GG++ G + ++ G
Sbjct: 79 LNELKWSFAVATITEIPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVDRGW 132
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEE 193
AIN GG HH GFC DI LAI L + E + VD+D H G+G E
Sbjct: 133 ---AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQGNGHER 189
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F RV + + Y PG ++K + V L+ G +D+ Y + +
Sbjct: 190 DFMGDKRVYIMDVYNRHIY-PGDR------FAK-QAIRRKVELEWGTEDDEYLQKVERNL 241
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGG 309
K ++ RP VV G D L GDRLG +S +G E V + +R +P+L++ G
Sbjct: 242 EKALQEHRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDELVFRIVRGRQLPILMVTSG 301
Query: 310 GYTIR 314
GY R
Sbjct: 302 GYQKR 306
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 211 (79.3 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 83/290 (28%), Positives = 126/290 (43%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLR---SITPETQ 92
HP + + L LL + +++ A + DL H Y++ L+ ++ T+
Sbjct: 7 HPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNELKWSFAVATITE 66
Query: 93 QDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGLCDIAINWAGGLHHAK 151
+ L F V V L +T GG++ G + + G AIN GG HH
Sbjct: 67 IPPVIFLPNFLVQRK--VLKPL----RTQTGGTIMAGKLAMERGW---AINVGGGFHHCS 117
Query: 152 KCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
GFC DI LAI L ++ E R VD+D H G+G E F RV + +
Sbjct: 118 SDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYN 177
Query: 209 FGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQ 268
Y PG ++K + V L+ G +D+ Y + + K ++ P VV
Sbjct: 178 RHIY-PGDR------FAK-QAIRRKVELEWGTEDDEYLDKVERNLQKALQEHLPDVVVYN 229
Query: 269 CGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGGGYTIR 314
G D L GDRLG ++S +G E V + +R VP+L++ GGY R
Sbjct: 230 AGTDILEGDRLGGLSISPQGIVKRDELVFRVVRGRQVPILMVTSGGYQKR 279
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 209 (78.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 76/284 (26%), Positives = 126/284 (44%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
H + R+ L GL ++Q+++P L H Y+S R + + ++
Sbjct: 19 HRFPMDKFRLLRDYLVDSGLTSDVQLMRPELCPADILALAHDPSYIS--RYLNGDLSRED 76
Query: 96 LRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK-LNHGLCDIAINWAGGLHHAKKCE 154
R+L P + L + GGS+ A + L HG+ A + AGG HHA
Sbjct: 77 QRRL-------GLPWSEALARRTVSAVGGSLLTAEQALKHGM---ACHLAGGTHHAHYDY 126
Query: 155 ASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY 212
+GFC ND+ + LL+ ++VL D D+H GDG T+ +TVS H +
Sbjct: 127 PAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILADTEDAITVSLHCEKN- 185
Query: 213 FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGAD 272
FP D ++PL G+ D +Y + ++ ++ ++P V+ G D
Sbjct: 186 FPARKAQSD----------WDIPLPMGMGDANYLNVVDDLLNYLLPFYKPDLVLYDAGVD 235
Query: 273 SLSGDRLGCFNLSIKGHA---ECV-KFMRSFNVPLLLLGGGGYT 312
D LG L+ +G A E V + S ++P++ + GGGY+
Sbjct: 236 VHKDDALGYLQLTDQGVANRDEAVLRHCLSRDIPVMGVIGGGYS 279
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 213 (80.0 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 87/305 (28%), Positives = 130/305 (42%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y P + G + HP + L LL + +++ A E DL H Y
Sbjct: 20 YSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRY 79
Query: 81 VSFLR---SITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGL 136
++ L+ ++ T+ + L F V V L +T GG++ G + + G
Sbjct: 80 LNELKWSFAVATITEIPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVERGW 133
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEE 193
AIN GG HH GFC DI LAI L ++ E R +D+D H G+G E
Sbjct: 134 ---AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHER 190
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F RV + + Y PG ++K + V L+ G +D+ Y + I
Sbjct: 191 DFMDDKRVYIMDVYNRHIY-PGDR------FAK-QAIRRKVELEWGTEDDEYLDKVERNI 242
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGG 309
K ++ P VV G D L GDRLG ++S G E V + +R +VP+L++ G
Sbjct: 243 EKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVPILMVTSG 302
Query: 310 GYTIR 314
GY R
Sbjct: 303 GYQKR 307
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 210 (79.0 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 84/290 (28%), Positives = 124/290 (42%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLR---SITPETQ 92
HP + L LL + +++ A E DL H Y++ L+ ++ T+
Sbjct: 7 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITE 66
Query: 93 QDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGLCDIAINWAGGLHHAK 151
+ L F V V L +T GG++ G + + G AIN GG HH
Sbjct: 67 IPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVERGW---AINVGGGFHHCS 117
Query: 152 KCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
GFC DI LAI L ++ E R +D+D H G+G E F RV + +
Sbjct: 118 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN 177
Query: 209 FGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQ 268
Y PG ++K + V L+ G +D+ Y + I K ++ P VV
Sbjct: 178 RHIY-PGDR------FAK-QAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYN 229
Query: 269 CGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGGGYTIR 314
G D L GDRLG ++S G E V + +R VP+L++ GGY R
Sbjct: 230 AGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKR 279
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 212 (79.7 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 87/305 (28%), Positives = 129/305 (42%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y P + G + HP + L LL + +++ A E DL H Y
Sbjct: 20 YSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRY 79
Query: 81 VSFLR---SITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGL 136
++ L+ ++ T+ + L F V V L +T GG++ G + + G
Sbjct: 80 LNELKWSFAVATITEIPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVERGW 133
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEE 193
AIN GG HH GFC DI LAI L ++ E R +D+D H G+G E
Sbjct: 134 ---AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHER 190
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F RV + + Y PG ++K + V L+ G +D+ Y + I
Sbjct: 191 DFMDDKRVYIMDVYNRHIY-PGDR------FAK-QAIRRKVELEWGTEDDEYLDKVERNI 242
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGG 309
K ++ P VV G D L GDRLG ++S G E V + +R VP+L++ G
Sbjct: 243 KKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSG 302
Query: 310 GYTIR 314
GY R
Sbjct: 303 GYQKR 307
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 209 (78.6 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 61/208 (29%), Positives = 93/208 (44%)
Query: 108 CPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLA 167
CP+ +G + A ++ GA + G + HHA A GFC++N+ +A
Sbjct: 117 CPIAEGTWEAAYWSAQSAITGADLIIQGERSAYVLSRPPGHHAFGDLAGGFCFLNNSAIA 176
Query: 168 ILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGDYFPGTGDIRDIG 223
L R +DID+HHG+G + FY D V+TVS H +F +F G R G
Sbjct: 177 AERLRAAGLRPAILDIDVHHGNGTQGIFYERDDVLTVSIHADPARFYPFFWGHAQERGAG 236
Query: 224 YSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFN 283
+G Y+LN+PL G D+ Y + +V F +V+ G D+ D
Sbjct: 237 --RGLGYNLNLPLARGTGDDDYLDTLSVALRQVAS-FGSRVLVVALGLDASIDDPFQGLA 293
Query: 284 LSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ G A + VP+L + GGY
Sbjct: 294 ITQDGFARIGAALAGTRVPVLFVQEGGY 321
Score = 40 (19.1 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSI 87
+P +P RI + A G + P A + H+ +Y++FL++I
Sbjct: 26 NPEQPRRIEVLRAGAEAAGCV----FAAPGDAGLGPIAALHSPEYLTFLQTI 73
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 218 (81.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 71/282 (25%), Positives = 135/282 (47%)
Query: 44 RMTHAL--LAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKR 101
R+T AL L GL + Q L A E +L H+ +Y++ ++ T +++L L +
Sbjct: 30 RLTAALDGLRQRGLEERCQCLSVCEASEEELGLVHSPEYIALVQK-TQTLDKEELHTLSK 88
Query: 102 FNVGEDCPVFDGLFSFCQTY--AGGSVGGAVKLNHGLCDIAINWAGGL-----HHAKKCE 154
+D ++ T+ A + G A++L + A++ L HH+++
Sbjct: 89 --------QYDAVYFHPDTFHCARLAAGAALRLVDAVLTGAVHNGVALVRPPGHHSQRAA 140
Query: 155 ASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--G 210
A+GFC N++ +A +++ +R+L VD D+HHG G++ F V+ S+H++ G
Sbjct: 141 ANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHG 200
Query: 211 DYFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVVL 267
+++P D +G +G+ +++N+P + G+ + Y F ++ + F P V++
Sbjct: 201 NFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLV 260
Query: 268 QCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGG 309
G DS GD G ++ EC + L +L GG
Sbjct: 261 SAGFDSAIGDPEG----QMQATPECFAHLTQL---LQVLAGG 295
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 81/308 (26%), Positives = 134/308 (43%)
Query: 39 KPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQ 98
+P R+ L GL Q L A E +L H+ +YV+ LR T ++L+
Sbjct: 27 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRG-TQALSTEELQA 85
Query: 99 LKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK-LNHGLC--DIAINWAGGLHHAKKCEA 155
L R D F C A G+ V + G+ +A+ G HH+++ A
Sbjct: 86 LSR---QFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPG-HHSQRAAA 141
Query: 156 SGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GD 211
+GFC N + +A ++H R+L VD DIHHG G + F V+ S+H++ G
Sbjct: 142 NGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGR 201
Query: 212 YFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVVLQ 268
++P D +G +G +++N+P + G+ + Y F ++ + F V++
Sbjct: 202 FWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVS 261
Query: 269 CGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG-------GGYTIRNVARCWC 321
G DS GD G ++ EC F + +L GG GGY + ++++ C
Sbjct: 262 AGFDSAIGDSEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVC 315
Query: 322 YETGVALG 329
LG
Sbjct: 316 MMVQALLG 323
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 81/308 (26%), Positives = 134/308 (43%)
Query: 39 KPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQ 98
+P R+ L GL Q L A E +L H+ +YV+ LR T ++L+
Sbjct: 29 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRG-TQALSTEELQA 87
Query: 99 LKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK-LNHGLC--DIAINWAGGLHHAKKCEA 155
L R D F C A G+ V + G+ +A+ G HH+++ A
Sbjct: 88 LSR---QFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPG-HHSQRAAA 143
Query: 156 SGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GD 211
+GFC N + +A ++H R+L VD DIHHG G + F V+ S+H++ G
Sbjct: 144 NGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGR 203
Query: 212 YFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVVLQ 268
++P D +G +G +++N+P + G+ + Y F ++ + F V++
Sbjct: 204 FWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVS 263
Query: 269 CGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGG-------GGYTIRNVARCWC 321
G DS GD G ++ EC F + +L GG GGY + ++++ C
Sbjct: 264 AGFDSAIGDSEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVC 317
Query: 322 YETGVALG 329
LG
Sbjct: 318 MMVQALLG 325
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 44/128 (34%), Positives = 69/128 (53%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA GFC ++ +A + H +R+ +D D+HHG+G +AF + +S
Sbjct: 201 HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLS 260
Query: 206 FHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAV 265
H+ G Y PGTG I DIG KG+ +LN+PL G D + +F+ II + F+P +
Sbjct: 261 THQDGSY-PGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDII 319
Query: 266 VLQCGADS 273
++ G D+
Sbjct: 320 LVSAGYDA 327
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 207 (77.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 55/178 (30%), Positives = 85/178 (47%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA+ A GFC N+I +A L H +R+ VD D+HHG+G + AF +V+ VS
Sbjct: 124 HHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHHGNGTQAAFRRNPQVLYVS 183
Query: 206 FHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAV 265
H++ ++PGTG + G G +N+PL G D +Y ++ FRP V
Sbjct: 184 THQY-PWYPGTGSAEETGV--GNL--VNIPLPAGTDSAAYREAVTATALPAIDRFRPELV 238
Query: 266 VLQCGADSLSGDRLGCFNLSIKGH----AECVKFM-RSFNVPLLLLGGGGYTIRNVAR 318
++ G D+ D L L+ + AE +K R ++ GGY + + R
Sbjct: 239 LISAGFDAHRDDPLADLALTEDDYGWITAELMKLADRHSGGRIVSALEGGYALEALGR 296
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 68/229 (29%), Positives = 104/229 (45%)
Query: 121 YA-GGSVGGAVKLNHGLCDIA-INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH--E 176
YA GG + G K+ G + A + HHA + GFC N++ L L L +H +
Sbjct: 94 YAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLK 153
Query: 177 RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYS-LNVP 235
RV VD D+HHG+G++ RV +S H+ +FP TGD G F + LN+P
Sbjct: 154 RVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQI-HHFPFTGD----SCEDGPFQNILNIP 208
Query: 236 LDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKF 295
L G D Y +F +I + P +++ G D+ D +G LS +G A +
Sbjct: 209 LPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRA 268
Query: 296 MRSFNVPLLLLGG-------GGYTIRNVARCWCYETGVALGVEVDDKMP 337
++ + GG GGY +A G +L V +D+ +P
Sbjct: 269 LKKTADEVC--GGKMVFSLEGGYHYLGLAE----SVGASLAVLLDEALP 311
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 68/229 (29%), Positives = 104/229 (45%)
Query: 121 YA-GGSVGGAVKLNHGLCDIA-INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH--E 176
YA GG + G K+ G + A + HHA + GFC N++ L L L +H +
Sbjct: 94 YAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLK 153
Query: 177 RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYS-LNVP 235
RV VD D+HHG+G++ RV +S H+ +FP TGD G F + LN+P
Sbjct: 154 RVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQI-HHFPFTGD----SCEDGPFQNILNIP 208
Query: 236 LDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKF 295
L G D Y +F +I + P +++ G D+ D +G LS +G A +
Sbjct: 209 LPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRA 268
Query: 296 MRSFNVPLLLLGG-------GGYTIRNVARCWCYETGVALGVEVDDKMP 337
++ + GG GGY +A G +L V +D+ +P
Sbjct: 269 LKKTADEVC--GGKMVFSLEGGYHYLGLAE----SVGASLAVLLDEALP 311
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 220 (82.5 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 58/183 (31%), Positives = 96/183 (52%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH----ERVLYVDIDIHHGDGVEEAFYTTDRVMT 203
HHA+ A GFC+ N I +A +LL+Q R+L VD D+HHG+G ++AFY + ++
Sbjct: 970 HHAEANLAMGFCFFNSIAIAA-KLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDILY 1028
Query: 204 VSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVP----LDDGIDDESYHYLFKPIIGKVM 257
+S H+ G++FPGTG + G G +++N+ L+ + D Y F+ ++ +
Sbjct: 1029 LSIHRHDDGNFFPGTGGPTECGSGAGLGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIA 1088
Query: 258 EVFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKFM-RSF----NVPLLLLGGGG 310
F P V++ G D+ +G LG +++S C FM R N ++L GG
Sbjct: 1089 RSFNPDIVLVSSGFDAATGHPAPLGGYHVS----PACFGFMTRELLQLANGKVVLALEGG 1144
Query: 311 YTI 313
Y +
Sbjct: 1145 YDL 1147
Score = 144 (55.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 62/231 (26%), Positives = 98/231 (42%)
Query: 6 NSLPSGTDGVKRKVC--YFYDPEVGNY--YYGQG--HPMKPHRIRMTHALLAHYGLLQNM 59
N PS + KV YDP + + G HP R++ A L L++
Sbjct: 810 NHQPSASGSPPHKVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRC 869
Query: 60 QVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQ-LKRFNVGEDCPVFDGL-FSF 117
L+ A + +L H + + S + + +L L V C GL
Sbjct: 870 DRLRARKATQEELQTVHTEAHAMLFGSNQCQLSRPKLENTLSASFVRLSC---GGLGVDL 926
Query: 118 CQTYAGGSVGGAVKLNHG-LCDIAINWA-GGL-----------HHAKKCEASGFCYVNDI 164
T+ A ++ G + D+A+ A G L HHA+ A GFC+ N I
Sbjct: 927 DTTWNEHHTATAARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSI 986
Query: 165 VLAILELLKQH----ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD 211
+A +LL+Q R+L VD D+HHG+G ++AFY + ++ +S H+ D
Sbjct: 987 AIAA-KLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDD 1036
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 210 (79.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 78/292 (26%), Positives = 126/292 (43%)
Query: 35 GHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQD 94
G P P R L+ GL +++++ A D+ R H Y+ R ++ ++
Sbjct: 37 GLPEAPETKRRLKNLIEVTGLHSDLEMVTGGSATIEDVLRVHPRSYIDEFRRLS-DSGGG 95
Query: 95 QLRQLKRFNVGEDCPVFDGLFSFCQTYAG---GSVGGAVKLNHGLCDIAINWAGGLHHAK 151
+L G P G F AG +V G V+ + A++ G HH
Sbjct: 96 EL--------GLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNA-YALSRPPG-HHCL 145
Query: 152 KCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
+GFC + +I +AI E K +V +D D+HHG+G E +Y D V+T+S H+
Sbjct: 146 PDWPNGFCLLANIAIAI-EAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQ 204
Query: 209 FGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQ 268
Y TG I D G G +++N+PL G +Y + +I ++ F V++
Sbjct: 205 DRCYPHDTGSIDDQGKGAGLGFNMNIPLPPGCGHNAYVEATERLIIPKLKAFDADLVIIA 264
Query: 269 CGADSLSGDRLGCFNLSIKGHAECVK-FMRSFNVPLLLLGGGGYTIRNVARC 319
CG D+ D L S + E + M+ + L+ GGY+ V C
Sbjct: 265 CGFDAGGFDPLARMMCSAETFREMTRRVMQVSDGKLVAAHEGGYSELYVPFC 316
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 208 (78.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 85/305 (27%), Positives = 129/305 (42%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y P + G + HP + L LL + +++ A E DL H Y
Sbjct: 20 YSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEAREASEEDLLVVHTRRY 79
Query: 81 VSFLR---SITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGL 136
++ L+ + T+ + L F V V L +T GG++ G + + G
Sbjct: 80 LNELKWSFVVATITEIPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVERGW 133
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEE 193
AIN GG HH GFC DI LAI L ++ E R +D+D H G+G E
Sbjct: 134 ---AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHER 190
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F RV + + Y PG ++ K V L+ G +DE Y + +
Sbjct: 191 DFMGDKRVYIMDVYNRHIY-PGDRFAKEAIRRK-------VELEWGTEDEEYLEKVERNV 242
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGG 309
+ ++ P VV G D L GDRLG ++S G E V + +R+ ++P+L++ G
Sbjct: 243 RRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSG 302
Query: 310 GYTIR 314
GY R
Sbjct: 303 GYQKR 307
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 208 (78.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 85/305 (27%), Positives = 129/305 (42%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y P + G + HP + L LL + +++ A E DL H Y
Sbjct: 20 YSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEAREASEEDLLVVHTRRY 79
Query: 81 VSFLR---SITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGL 136
++ L+ + T+ + L F V V L +T GG++ G + + G
Sbjct: 80 LNELKWSFVVATITEIPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVERGW 133
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEE 193
AIN GG HH GFC DI LAI L ++ E R +D+D H G+G E
Sbjct: 134 ---AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHER 190
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F RV + + Y PG ++ K V L+ G +DE Y + +
Sbjct: 191 DFMGDKRVYIMDVYNRHIY-PGDRFAKEAIRRK-------VELEWGTEDEEYLEKVERNV 242
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGG 309
+ ++ P VV G D L GDRLG ++S G E V + +R+ ++P+L++ G
Sbjct: 243 RRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSG 302
Query: 310 GYTIR 314
GY R
Sbjct: 303 GYQKR 307
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 203 (76.5 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 60/197 (30%), Positives = 93/197 (47%)
Query: 125 SVGGA-VKLNHGL-CDIAINWAGGLHHAKKCEASGFCYVNDIVLAI-LEL-LKQHERVLY 180
SVGG + + L +AI+ +GG HHA SGFC ND+ +A L L ++VL
Sbjct: 100 SVGGTCLTVEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLI 159
Query: 181 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGT--GDIRDIGYSKGKFYSLNVPLDD 238
+D D+HHGDG D ++T+SFH FP D+GY+
Sbjct: 160 IDSDVHHGDGTATLCAERDEIITLSFH-CDKNFPARKPASSMDVGYAN----------QT 208
Query: 239 GIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFM-- 296
G DE + F ++ + + RP ++ G D + D LG ++S A+ +FM
Sbjct: 209 G--DEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLG 266
Query: 297 --RSFNVPLLLLGGGGY 311
+ ++P+ + GGGY
Sbjct: 267 LAKQESIPIACVIGGGY 283
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 203 (76.5 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 60/197 (30%), Positives = 93/197 (47%)
Query: 125 SVGGA-VKLNHGL-CDIAINWAGGLHHAKKCEASGFCYVNDIVLAI-LEL-LKQHERVLY 180
SVGG + + L +AI+ +GG HHA SGFC ND+ +A L L ++VL
Sbjct: 100 SVGGTCLTVEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLI 159
Query: 181 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGT--GDIRDIGYSKGKFYSLNVPLDD 238
+D D+HHGDG D ++T+SFH FP D+GY+
Sbjct: 160 IDSDVHHGDGTATLCAERDEIITLSFH-CDKNFPARKPASSMDVGYAN----------QT 208
Query: 239 GIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFM-- 296
G DE + F ++ + + RP ++ G D + D LG ++S A+ +FM
Sbjct: 209 G--DEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLG 266
Query: 297 --RSFNVPLLLLGGGGY 311
+ ++P+ + GGGY
Sbjct: 267 LAKQESIPIACVIGGGY 283
>UNIPROTKB|A6ND61 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HOVERGEN:HBG057112 CTD:55869 KO:K11405
EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00642258
RefSeq:NP_001159920.1 ProteinModelPortal:A6ND61 SMR:A6ND61
STRING:A6ND61 Ensembl:ENST00000373559 UCSC:uc022byv.1
ArrayExpress:A6ND61 Bgee:A6ND61 Uniprot:A6ND61
Length = 139
Score = 168 (64.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 41/89 (46%), Positives = 52/89 (58%)
Query: 144 AGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMT 203
A LH + EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDG T D V
Sbjct: 47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG------TGD-VSD 99
Query: 204 VSFHKFGDYFPGTGDIRDIGYSKGKFYSL 232
V K G Y+ I+D G K+Y +
Sbjct: 100 VGLGK-GRYYSVNVPIQD-GIQDEKYYQI 126
Score = 124 (48.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 199 DRVMTVSFH-KFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 248
+R++ V GD GTGD+ D+G KG++YS+NVP+ DGI DE Y+ +
Sbjct: 79 ERILYVDLDLHHGD---GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 126
Score = 43 (20.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 21 YFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQ 60
Y Y PE Y + P R M H+L+ Y L + M+
Sbjct: 18 YIYSPE----YVSMCDSLAKIPKRASMVHSLIEAYALHKQMR 55
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 207 (77.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 69/253 (27%), Positives = 105/253 (41%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
H P R L+ GL +++ L+P A + + H ++ L S+ D
Sbjct: 43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGD- 101
Query: 96 LRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA-INWAGGLHHAKKCE 154
GE P + GG + + G + A + HHA
Sbjct: 102 --------AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDL 153
Query: 155 ASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY 212
A GFC + + L I + K + R+ VD D+HHG+G E F V+T+S H+ +
Sbjct: 154 AMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-DNL 212
Query: 213 FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGAD 272
FP D IG ++NVPL G +Y F+ I+ ++ F P +VL CG D
Sbjct: 213 FPL--DSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYD 270
Query: 273 SLSGDRLGCFNLS 285
+ + D LG LS
Sbjct: 271 ASAVDPLGVCMLS 283
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 207 (77.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 69/253 (27%), Positives = 105/253 (41%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ 95
H P R L+ GL +++ L+P A + + H ++ L S+ D
Sbjct: 43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGD- 101
Query: 96 LRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA-INWAGGLHHAKKCE 154
GE P + GG + + G + A + HHA
Sbjct: 102 --------AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDL 153
Query: 155 ASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY 212
A GFC + + L I + K + R+ VD D+HHG+G E F V+T+S H+ +
Sbjct: 154 AMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-DNL 212
Query: 213 FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGAD 272
FP D IG ++NVPL G +Y F+ I+ ++ F P +VL CG D
Sbjct: 213 FPL--DSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYD 270
Query: 273 SLSGDRLGCFNLS 285
+ + D LG LS
Sbjct: 271 ASAVDPLGVCMLS 283
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 206 (77.6 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 61/182 (33%), Positives = 86/182 (47%)
Query: 140 AINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEEAFY 196
AIN GG HH GFC DI LAI L ++ E R +D+D H G+G E F
Sbjct: 133 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 192
Query: 197 TTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKV 256
RV + + Y PG ++K + V L+ +D+ Y + + K
Sbjct: 193 GDKRVYIMDVYNRHIY-PGDR------FAK-QAIRRKVELEWATEDDEYLTKVERNLEKA 244
Query: 257 MEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLLGGGGYT 312
++ RP VV G D L GDRLG ++S +G E V + +RS VP+L++ GGY
Sbjct: 245 LQEHRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVRSLQVPILMVTSGGYQ 304
Query: 313 IR 314
R
Sbjct: 305 KR 306
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 53/192 (27%), Positives = 98/192 (51%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HH+++ A+GFC N++ +A ++H +R+L VD D+HHG G++ F V+ S
Sbjct: 16 HHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFS 75
Query: 206 FHKF--GDYFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVF 260
+H++ G ++P D +G KG+ +++N+P + G+ + Y F ++ V F
Sbjct: 76 WHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEF 135
Query: 261 RPGAVVLQCGADSLSGDRLGCFNLSIK--GH-AECVKFMRSFNVPLLLLGGGGYTIRNVA 317
P V++ G DS GD G + + GH + ++ + V +L GGY + +++
Sbjct: 136 DPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGRVCAVL--EGGYHLESLS 193
Query: 318 RCWCYETGVALG 329
+ C LG
Sbjct: 194 QSVCMVVRALLG 205
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 60/200 (30%), Positives = 90/200 (45%)
Query: 120 TYAGGSVGGA-VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE-- 176
T GG++ A + L +G ++N GG HHA SGFC +ND+ LA L +L+
Sbjct: 94 TAVGGTIMTAQLALEYGK---SLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNIS 150
Query: 177 RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVP 235
+VL D D+H GDG + V TVS H G+ FP + ++ ++
Sbjct: 151 KVLIFDADVHQGDGTAKLASNNQNVFTVSIH--GEKNFPHRKQVSNLDFA---------- 198
Query: 236 LDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKF 295
L G D Y + K F+P AV+ G D D LG ++S +G K
Sbjct: 199 LPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQGVLARDKL 258
Query: 296 MRSF----NVPLLLLGGGGY 311
+ + +P+ + GGGY
Sbjct: 259 VFDYCKLKGIPIAAVIGGGY 278
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 60/200 (30%), Positives = 90/200 (45%)
Query: 120 TYAGGSVGGA-VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE-- 176
T GG++ A + L +G ++N GG HHA SGFC +ND+ LA L +L+
Sbjct: 94 TAVGGTIMTAQLALEYGK---SLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNIS 150
Query: 177 RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVP 235
+VL D D+H GDG + V TVS H G+ FP + ++ ++
Sbjct: 151 KVLIFDADVHQGDGTAKLASNNQNVFTVSIH--GEKNFPHRKQVSNLDFA---------- 198
Query: 236 LDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKF 295
L G D Y + K F+P AV+ G D D LG ++S +G K
Sbjct: 199 LPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQGVLARDKL 258
Query: 296 MRSF----NVPLLLLGGGGY 311
+ + +P+ + GGGY
Sbjct: 259 VFDYCKLKGIPIAAVIGGGY 278
>UNIPROTKB|E5RJ04 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00964796 ProteinModelPortal:E5RJ04 SMR:E5RJ04
Ensembl:ENST00000523240 ArrayExpress:E5RJ04 Bgee:E5RJ04
Uniprot:E5RJ04
Length = 65
Score = 184 (69.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR 97
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 98 QLKRF 102
Q++RF
Sbjct: 61 QMQRF 65
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 198 (74.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 82/311 (26%), Positives = 127/311 (40%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKP-FPARERDLCR 74
+R + Y + V + HP + R L L+ + +++P P E +L R
Sbjct: 16 QRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHLKEMNLITDETLVEPNLPTFE-ELTR 74
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGA-VKLN 133
H Y L+S+ + Q+ ++ C + L + AGG+V A + L
Sbjct: 75 VHDRKY---LKSVRNPIKAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANLALK 131
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELL--KQHERVLYVDIDIHHGDGV 191
HG AIN GG HHA GFC+ DI +AI +L K + VD+D H G+G
Sbjct: 132 HGW---AINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGH 188
Query: 192 EEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFK 250
F V F F Y +P + R +F + V ++ D SY +
Sbjct: 189 ARDFADNPNVFV--FDVFNPYVYPHDREAR-------QFINRAVHVNGHTTDTSYLSELR 239
Query: 251 PIIGKVM----EVFRPGA--VVLQCGADSLSGDRLGCFNLS---IKGHAECV-KFMRSFN 300
+ + + + PG ++ G D L GD LG LS I E V +S
Sbjct: 240 KQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKG 299
Query: 301 VPLLLLGGGGY 311
+P+ ++ GGY
Sbjct: 300 IPICMVTSGGY 310
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 198 (74.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 82/311 (26%), Positives = 127/311 (40%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKP-FPARERDLCR 74
+R + Y + V + HP + R L L+ + +++P P E +L R
Sbjct: 16 QRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHLKEMNLITDETLVEPNLPTFE-ELTR 74
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGA-VKLN 133
H Y L+S+ + Q+ ++ C + L + AGG+V A + L
Sbjct: 75 VHDRKY---LKSVRNPIKAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANLALK 131
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELL--KQHERVLYVDIDIHHGDGV 191
HG AIN GG HHA GFC+ DI +AI +L K + VD+D H G+G
Sbjct: 132 HGW---AINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGH 188
Query: 192 EEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFK 250
F V F F Y +P + R +F + V ++ D SY +
Sbjct: 189 ARDFADNPNVFV--FDVFNPYVYPHDREAR-------QFINRAVHVNGHTTDTSYLSELR 239
Query: 251 PIIGKVM----EVFRPGA--VVLQCGADSLSGDRLGCFNLS---IKGHAECV-KFMRSFN 300
+ + + + PG ++ G D L GD LG LS I E V +S
Sbjct: 240 KQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKG 299
Query: 301 VPLLLLGGGGY 311
+P+ ++ GGY
Sbjct: 300 IPICMVTSGGY 310
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 195 (73.7 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 77/285 (27%), Positives = 123/285 (43%)
Query: 41 HRIRMT-HALLAHYGLLQNM-----QVLKPFPARERDLCRFHADDYVSFLRSITPETQQD 94
HR T +A L Y LL N Q P P ++ + H DYV T T
Sbjct: 19 HRFPTTKYAHLYQY-LLDNQLATPTQFHTPTPMTAEEIMQVHHRDYVEQFIDGTLATSA- 76
Query: 95 QLRQLKRFNVGEDCPVFDGLFS-FCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKC 153
L+R +G P + L + AG S+ A+ L G IA++ GG HHA
Sbjct: 77 ----LRR--IG--FPWSEALVERTLHSLAGTSLTAALALQTG---IALHLTGGYHHAHYE 125
Query: 154 EASGFCYVNDIVLAILELL--KQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD 211
SG+C ND+++A +L+ +Q ++L D D+H GDG +++ S H D
Sbjct: 126 FGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLSQLHQGIISCSIH-CKD 184
Query: 212 YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGA 271
FP S+ + ++ L G DD +Y + + ++ + +P ++ G
Sbjct: 185 NFP----------SRKQHSHYDIELVKGTDDSAYLDTVEQTLELLIRLHQPDLILYDAGV 234
Query: 272 DSLSGDRLGCFNLSIKG----HAECVKFMRSFNVPLLLLGGGGYT 312
D D LG +S +G + R+ N+P+ + GGGY+
Sbjct: 235 DIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAVIGGGYS 279
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 195 (73.7 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 77/285 (27%), Positives = 123/285 (43%)
Query: 41 HRIRMT-HALLAHYGLLQNM-----QVLKPFPARERDLCRFHADDYVSFLRSITPETQQD 94
HR T +A L Y LL N Q P P ++ + H DYV T T
Sbjct: 19 HRFPTTKYAHLYQY-LLDNQLATPTQFHTPTPMTAEEIMQVHHRDYVEQFIDGTLATSA- 76
Query: 95 QLRQLKRFNVGEDCPVFDGLFS-FCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKC 153
L+R +G P + L + AG S+ A+ L G IA++ GG HHA
Sbjct: 77 ----LRR--IG--FPWSEALVERTLHSLAGTSLTAALALQTG---IALHLTGGYHHAHYE 125
Query: 154 EASGFCYVNDIVLAILELL--KQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD 211
SG+C ND+++A +L+ +Q ++L D D+H GDG +++ S H D
Sbjct: 126 FGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLSQLHQGIISCSIH-CKD 184
Query: 212 YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGA 271
FP S+ + ++ L G DD +Y + + ++ + +P ++ G
Sbjct: 185 NFP----------SRKQHSHYDIELVKGTDDSAYLDTVEQTLELLIRLHQPDLILYDAGV 234
Query: 272 DSLSGDRLGCFNLSIKG----HAECVKFMRSFNVPLLLLGGGGYT 312
D D LG +S +G + R+ N+P+ + GGGY+
Sbjct: 235 DIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAVIGGGYS 279
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 198 (74.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 61/205 (29%), Positives = 96/205 (46%)
Query: 119 QTYAGGSV-GGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-- 175
+T GG++ G + ++ G AIN GG HH + GFC DI LAI L ++
Sbjct: 114 RTQTGGTIMAGKLAVDRGW---AINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPG 170
Query: 176 -ERVLYVDIDIHHGDGVEEAFYTTDRVMTV-SFHKFGDYFPGTGDIRDIGYSKGKFYSLN 233
+ +D+D H G+G E F RV + +++++ +PG G ++K +
Sbjct: 171 VSKATIIDLDAHQGNGHERDFMNDHRVYIMDAYNRY--IYPGDG------FAK-RAIKRK 221
Query: 234 VPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HA 290
V L+ G +D Y + + +P +V G D L GD LG +S +G
Sbjct: 222 VELEWGTEDTEYLQKVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRD 281
Query: 291 ECV-KFMRSFNVPLLLLGGGGYTIR 314
E V K RS +P+L++ GGY R
Sbjct: 282 EVVFKAARSRGIPILMVTSGGYQKR 306
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 196 (74.1 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 89/312 (28%), Positives = 131/312 (41%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y PE + G + HP + L + + ++ A E DL H Y
Sbjct: 31 YSPEYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFITDEIIVLAREASEADLLVVHTARY 90
Query: 81 VSFLR---SITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGL 136
++ L+ + T+ L L F V V L +T GG++ G + ++ G
Sbjct: 91 LNRLKWSLVVATITEIPPLLFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAIDRGW 144
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL---YVDIDIHHGDGVEE 193
AIN GG HH + GFC DI LAI L ++ E V +D+D H G+G E
Sbjct: 145 ---AINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQGNGHER 201
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F RV + + Y PG G Y+K + V LD G +D Y L K +
Sbjct: 202 DFLEDRRVYIMDVYNRHIY-PGDG------YAK-RAIKRKVELDWGTEDSEY--LQKVDL 251
Query: 254 ---GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HAECV-KFMRSFNVPLLLL 306
G + E RP ++ G D L GD LG +S +G E + + R +P+L++
Sbjct: 252 HSEGALNEA-RPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFRAARRRGIPILMV 310
Query: 307 GGGGYTIRNVAR 318
GGY + AR
Sbjct: 311 TSGGYQ-KKTAR 321
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 203 (76.5 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 34/98 (34%), Positives = 61/98 (62%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HHA++ A GFC+ N + + L Q ++L VD+D+HHG+G ++AFY ++ +S
Sbjct: 782 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPNILYIS 841
Query: 206 FHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID 241
H++ G++FPG+G ++G G+ Y++N+ G+D
Sbjct: 842 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 879
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 58/239 (24%), Positives = 102/239 (42%)
Query: 84 LRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCD-IAIN 142
LRS+ P + QL F+ G P+ G + + A ++ + +G A+
Sbjct: 97 LRSVIPTSLHGQLGYYS-FDGG--APITAGTWQAAYSAAQVALTAQAHIQNGAHSAFALC 153
Query: 143 WAGGLHHAKKCEASGFCYVNDIVLAILELLKQ-HERVLYVDIDIHHGDGVEEAFYTTDRV 201
G HHA G+CY+N+ +A L Q H +V +D+D HHG+G + FY V
Sbjct: 154 RPPG-HHAAGDLMGGYCYLNNAAIAAQAFLDQGHRKVAILDVDYHHGNGTQSIFYERSDV 212
Query: 202 MTVSFHKFGD----YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVM 257
+ S H + +F G D + G G+ ++ N PL G +++ + ++
Sbjct: 213 LFTSIHGHPEAEFPFFLGYAD--ECGEGAGEGFNFNYPLAAGSGWDAWSAALEQACNEIQ 270
Query: 258 EVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNV 316
+ +V+ G D+ D + F L + K + + P L + GGY + +
Sbjct: 271 R-YDADIIVVSLGVDTFKDDPISQFKLDSPDYLAMGKRIAALGKPTLFVMEGGYAVEEI 328
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 184 (69.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 74/272 (27%), Positives = 114/272 (41%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y P + G + HP + + L LL + +++ A + DL H Y
Sbjct: 19 YSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEAREASDEDLLVVHTRRY 78
Query: 81 VSFLR---SITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGL 136
++ L+ ++ T+ + L F V V L +T GG++ G + + G
Sbjct: 79 LNELKWSFAVATITEIPPVIFLPNFLVQRK--VLKPL----RTQTGGTIMAGKLAVERGW 132
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEE 193
AIN GG HH GFC DI LAI L ++ E R +D+D H G+G E
Sbjct: 133 ---AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHER 189
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F RV + + Y PG ++K + V L+ +D+ Y + +
Sbjct: 190 DFMGDKRVYIMDVYNRHIY-PGDR------FAK-QAIRRKVELEWATEDDEYLTKVERNL 241
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLS 285
K ++ RP VV G D L GDRLG ++S
Sbjct: 242 EKALQEHRPDVVVYNAGTDVLEGDRLGGLSIS 273
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 187 (70.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 49/176 (27%), Positives = 79/176 (44%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 206
HHA + G+CY+N+ +A + + RV +D+D HHG+G + FY V+ VS
Sbjct: 158 HHAAREYMGGYCYLNNAAIAAQHAITRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSL 217
Query: 207 HKFGD------YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVF 260
H GD YF G R G +G +LN+PL + Y + + K + F
Sbjct: 218 H--GDPAVSYPYFSGHASERGSGAGEG--CNLNLPLPKNTSWQHYRQALE-LACKQLRAF 272
Query: 261 RPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNV 316
P +V+ G D+ D + F L + + + + P L + GGY + +
Sbjct: 273 APELLVVSLGVDTFKDDPISHFLLESEDFLGMGQIIATVGTPTLFVMEGGYMVDEI 328
>UNIPROTKB|I3LHJ7 [details] [associations]
symbol:I3LHJ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 GeneTree:ENSGT00530000062889
Ensembl:ENSSSCT00000031343 Uniprot:I3LHJ7
Length = 51
Score = 169 (64.5 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 202 MTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 248
MTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHI 48
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 186 (70.5 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 61/198 (30%), Positives = 88/198 (44%)
Query: 122 AGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH----ER 177
AG + G + L++G AIN GG HH GFC DI L I+ L +Q R
Sbjct: 135 AGSILAGKLALDYGW---AINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRR 191
Query: 178 VLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLD 237
++ VD+D H G+G E F V + Y P RD + + V L
Sbjct: 192 IMIVDLDAHQGNGHERDFNNVAAVYIFDMYNAFVY-P-----RD--HVAKESIRCAVELR 243
Query: 238 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFM- 296
+ +D Y K + + + FRP VV G D L GD LG +S +G E + +
Sbjct: 244 NYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVF 303
Query: 297 ---RSFNVPLLLLGGGGY 311
R+ +P+++L GGY
Sbjct: 304 STFRALGIPVVMLLSGGY 321
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 183 (69.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 62/197 (31%), Positives = 91/197 (46%)
Query: 123 GGSVGGAVK-LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVL 179
GGS+ A + L HGL A + AGG HHA +GFC ND+ + LL+ RVL
Sbjct: 97 GGSLLAAEQALEHGL---ACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVL 153
Query: 180 YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDG 239
D D+H GDG T +TVS H + FP D ++PL G
Sbjct: 154 IFDCDVHQGDGTARILQHTADAVTVSLHCEKN-FPARKAQSD----------WDIPLPMG 202
Query: 240 IDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAEC-VKFMRS 298
+ D Y + + ++ +++P V+ G D D LG L+ G AE + MR
Sbjct: 203 MGDADYLNVVDDTLNYLLPLYQPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVMRH 262
Query: 299 F---NVPLLLLGGGGYT 312
++P++ + GGGY+
Sbjct: 263 CLGRDIPVVGVIGGGYS 279
>UNIPROTKB|E5RFI6 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976946 ProteinModelPortal:E5RFI6 SMR:E5RFI6
Ensembl:ENST00000520895 ArrayExpress:E5RFI6 Bgee:E5RFI6
Uniprot:E5RFI6
Length = 60
Score = 166 (63.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQD 94
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P+ +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE 57
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 67/254 (26%), Positives = 107/254 (42%)
Query: 35 GHPMKPHRIR-MTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQ 93
GHP + R+ + HAL L +V P A E DL R H YV+ +R P+
Sbjct: 19 GHPERVARLEHVLHALEP----LDLRRVTAPLAA-EDDLLRIHPAGYVADIRDARPDEGF 73
Query: 94 DQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKC 153
Q+ + G F + + +GG + + C AI G HHA++
Sbjct: 74 AQIDGDTFLSPGSVDAAFRAAGAVVRA-VDMVLGGEAQ--NAFC--AIRPPG--HHAERE 126
Query: 154 EASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD 211
A GFC + LA L H RV VD D+HHG+G ++ + R + ++ +
Sbjct: 127 TAMGFCLFGNAALAAKHALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQM-P 185
Query: 212 YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGA 271
+PG+G + G + G+ +N+PL G + + F+P +++ G
Sbjct: 186 LWPGSGRPDEDG-AHGQI--VNIPLAPGTGGAEMRAAYMAQAFPRLRAFKPELIIISAGF 242
Query: 272 DSLSGDRLGCFNLS 285
D+ D L N S
Sbjct: 243 DAHQDDPLANLNWS 256
>UNIPROTKB|E5RK19 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976604 ProteinModelPortal:E5RK19 SMR:E5RK19
Ensembl:ENST00000524334 ArrayExpress:E5RK19 Bgee:E5RK19
Uniprot:E5RK19
Length = 52
Score = 162 (62.1 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 38 MKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITP 89
MKPHRIRMTH LL +YGL + M++ +P A ++ ++H+D+Y+ FLRSI P
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRP 52
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 171 (65.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 64/249 (25%), Positives = 109/249 (43%)
Query: 24 DPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYV 81
D ++ ++ + P P R+ L GLL + A + +L H+ +Y+
Sbjct: 36 DEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYI 95
Query: 82 SFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL---CD 138
+ + T + +LR L + + + +S C A GSV V G
Sbjct: 96 DLMET-TQYMNEGELRVLA--DTYDSVYLHPNSYS-CACLASGSVLRLVDAVLGAEIRNG 151
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFY 196
+AI G HHA+ G+C N + +A ++H RVL VD D+HHG G + F
Sbjct: 152 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFD 210
Query: 197 TTDRVMTVSFHKF--GDYFPG--TGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKP 251
V+ S H++ G ++P + G+ +G+ Y++NVP + G+ D Y F
Sbjct: 211 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLH 270
Query: 252 IIGKV-MEV 259
++ V +EV
Sbjct: 271 VLLPVALEV 279
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 182 (69.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 61/214 (28%), Positives = 100/214 (46%)
Query: 44 RMTHAL--LAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKR 101
R+T AL L GL Q L A E +L H+ +YVS +R ETQ +L+
Sbjct: 30 RLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVR----ETQVLGKEELQA 85
Query: 102 FNVGEDCPVFDGLFSFCQTYAGGS---VGGAVKLNHGLCDIAINWAGGLHHAKKCEASGF 158
+ D F C A G+ + AV +A+ G HH ++ A+GF
Sbjct: 86 LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRAAANGF 144
Query: 159 CYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFP 214
C N++ +A ++H R+L VD D+HHG G++ F V+ S+H++ G ++P
Sbjct: 145 CVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWP 204
Query: 215 --GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESY 245
D +G +G +++N+P + G+ + Y
Sbjct: 205 FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Score = 39 (18.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 288 GHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALG 329
G+A+ V +PL GGY + ++A C LG
Sbjct: 234 GNADYVAAFLHLLLPLAF--EGGYHLESLAESVCMTVQTLLG 273
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 172 (65.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 40/138 (28%), Positives = 72/138 (52%)
Query: 184 DIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID 241
D+HHG+G ++ FY V+ +S H+ G++FPG+G + ++G G+ +++NV G+D
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLD 198
Query: 242 ----DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDR--LGCFNLSIKGHAECVKF 295
D Y F+ ++ + F P V++ G D+ G LG +++S A+C +
Sbjct: 199 PPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS----AKCFGY 254
Query: 296 MRSFNVPLLLLGGGGYTI 313
M L+ L GG +
Sbjct: 255 MTQ---QLMNLAGGAVVL 269
Score = 39 (18.8 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYV 81
HP RI+ + L GL + L+ A +L H++ +V
Sbjct: 21 HPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV 66
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HH+++ A+GFC N + +A ++H R+L VD DIHHG G + F V+ S
Sbjct: 90 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 149
Query: 206 FHKF--GDYFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLF-KPIIGKVMEV 259
+H++ G ++P D +G +G +++N+P + G+ + Y F + ++ +
Sbjct: 150 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFE 209
Query: 260 FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGG 309
F V++ G DS GD G ++ EC + L +L GG
Sbjct: 210 FNAELVLVSAGFDSAIGDSEG----QMQATPECFAHLTQL---LQVLAGG 252
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 148 HHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVS 205
HH+++ A+GFC N + +A ++H R+L VD DIHHG G + F V+ S
Sbjct: 104 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 163
Query: 206 FHKF--GDYFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLF-KPIIGKVMEV 259
+H++ G ++P D +G +G +++N+P + G+ + Y F + ++ +
Sbjct: 164 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFE 223
Query: 260 FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGG 309
F V++ G DS GD G ++ EC + L +L GG
Sbjct: 224 FNAELVLVSAGFDSAIGDSEG----QMQATPECFAHLTQL---LQVLAGG 266
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 108 (43.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 155 ASGFCYVNDIVL-AILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD- 211
+ GFC +N + + A LK + +++ +D D+HHG+G EE +S H F +
Sbjct: 1244 SQGFCLLNHVCIGAKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG 1303
Query: 212 YFPGTGD-IRDIGY-SKGKFYSLNVPLDDGIDDES 244
++PG+G + IG + +F N DD DD +
Sbjct: 1304 FYPGSGGGVGSIGVVNLNEFNEQN-DYDD--DDNN 1335
Score = 81 (33.6 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 232 LNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAE 291
+N+PLD S+ F II K+ + ++P +++ CG D+ D L L + + E
Sbjct: 1386 VNIPLDPKSSASSFLKAFSIIIDKLND-YQPELILISCGFDAHMEDHLASLCLLEENYVE 1444
Query: 292 CVKFMRSF-----NVPLLLLGGGGYTIRNVARC 319
+ +R L+ + GGY I + +C
Sbjct: 1445 ITRSLRRVADRWCKGRLVSILEGGYNINALRQC 1477
Score = 75 (31.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 33/158 (20%), Positives = 57/158 (36%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD--LC 73
+RKV Y ++ HP P R+ + + + ++K P D +
Sbjct: 1058 ERKVMALYHTTCLDHLVPDDHPESPKRLSSVIKAINDFSRQSDRLIIKNDPEEINDKWIL 1117
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV---GGAV 130
H+ +Y+ L +T + +++R L N G + S T G + G
Sbjct: 1118 TVHSPEYLRLLEDLTEKLDANEIRPLNVNNDGASTGINQFSTSTPITTTGTATVTPGSTT 1177
Query: 131 KLNHG-LCDIAINWAGGLH-HAKKCEASGFCYVNDIVL 166
+G C+ + L HA K A C D V+
Sbjct: 1178 SSTNGEQCEDGDTFVSKLSLHAAKRSAGATCQAIDNVM 1215
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 148 (57.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/183 (28%), Positives = 93/183 (50%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARE---RDLCRFHADDYVSFLRSITPETQQDQL 96
P R+ ++ L Y L++ P PARE ++ H+ +++ +S +T ++
Sbjct: 30 PERLSASYEQLQCYHLVERCV---PVPAREGSEEEILLVHSSEHLEAAKST--QTMNEE- 83
Query: 97 RQLKRFNVGEDCPVFDGLFSFCQTY--AGGSVGGAVKL-----NHGLCD-IAINWAGGLH 148
+LKR + G +D F TY A +VG A++L + +C+ +A+ G H
Sbjct: 84 -ELKRIS-GN----YDSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-H 136
Query: 149 HAKKCEASGFCYVNDIVLAI-LELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 206
H+++ A+GFC N++ +A LK +R+L VD D+HHG G + F V+ S+
Sbjct: 137 HSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSW 196
Query: 207 HKF 209
H++
Sbjct: 197 HRY 199
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 124 (48.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 48/167 (28%), Positives = 70/167 (41%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLR---SITPETQ 92
HP + L LL + +++ A E DL H Y++ L+ ++ T+
Sbjct: 7 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITE 66
Query: 93 QDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGLCDIAINWAGGLHHAK 151
+ L F V V L +T GG++ G + + G AIN GG HH
Sbjct: 67 IPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVERGW---AINVGGGFHHCS 117
Query: 152 KCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEEAF 195
GFC DI LAI L ++ E R +D+D H G+G E F
Sbjct: 118 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDF 164
>UNIPROTKB|B5MCQ6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
Length = 268
Score = 141 (54.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 47/159 (29%), Positives = 74/159 (46%)
Query: 160 YVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDI 219
Y+N++ + E ++ R +D+D H G+G E F RV + + Y PG
Sbjct: 79 YLNELKF-LFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIY-PGDR-- 134
Query: 220 RDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRL 279
++K + V L+ G +D+ Y + I K ++ P VV G D L GDRL
Sbjct: 135 ----FAK-QAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRL 189
Query: 280 GCFNLSIKG---HAECV-KFMRSFNVPLLLLGGGGYTIR 314
G ++S G E V + +R VP+L++ GGY R
Sbjct: 190 GGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKR 228
Score = 38 (18.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 23 YDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDY 80
Y P + G + HP + L LL + +++ A E DL H Y
Sbjct: 20 YSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRY 79
Query: 81 VSFLR 85
++ L+
Sbjct: 80 LNELK 84
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 53/187 (28%), Positives = 77/187 (41%)
Query: 36 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLR---SITPETQ 92
HP + L LL + +++ A E DL H Y++ L+ ++ T+
Sbjct: 7 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITE 66
Query: 93 QDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSV-GGAVKLNHGLCDIAINWAGGLHHAK 151
+ L F V V L +T GG++ G + + G AIN GG HH
Sbjct: 67 IPPVIFLPNFLVQRK--VLRPL----RTQTGGTIMAGKLAVERGW---AINVGGGFHHCS 117
Query: 152 KCEASGFCYVNDIVLAILELLKQHE---RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 208
GFC DI LAI L ++ E R +D+D H G+G E F RV + +
Sbjct: 118 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN 177
Query: 209 FGDYFPG 215
Y PG
Sbjct: 178 RHIY-PG 183
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 42/170 (24%), Positives = 72/170 (42%)
Query: 28 GNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSI 87
G + G+ HP R+ L GL ++ P + L H +++ F+
Sbjct: 12 GEHNMGEHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPIDKSLLALAHTQEHIDFVFDN 71
Query: 88 TPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAI--NWAG 145
P ++ F VGED + + + AG +V + G A
Sbjct: 72 APNEGEEN------FTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCATRPP 125
Query: 146 GLHHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEE 193
G HHA+ + GFC+ N++ +A +++ +RV VD D+HHG+G E+
Sbjct: 126 G-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 42/170 (24%), Positives = 72/170 (42%)
Query: 28 GNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSI 87
G + G+ HP R+ L GL ++ P + L H +++ F+
Sbjct: 12 GEHNMGEHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPIDKSLLALAHTQEHIDFVFDN 71
Query: 88 TPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAI--NWAG 145
P ++ F VGED + + + AG +V + G A
Sbjct: 72 APNEGEEN------FTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCATRPP 125
Query: 146 GLHHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEE 193
G HHA+ + GFC+ N++ +A +++ +RV VD D+HHG+G E+
Sbjct: 126 G-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 148 (57.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/164 (24%), Positives = 71/164 (43%)
Query: 144 AGGLHHAKKCEASGFCYVNDIVLAI--LELLKQHERVLYVDIDIHHGDGVEEAFYTTDRV 201
AG + G+C +N++ + L + R+ VD D+HHG+G +E D
Sbjct: 1214 AGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNF 1273
Query: 202 MTVSFHKFGD---YFPGTG-DIRDIGYSKGKFYS--LNVPLDDGIDDESY-HYLFKPIIG 254
+ +S H + ++PGTG D+ DI G+F LN+ L + II
Sbjct: 1274 LFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNILNIGLKRNTGSAVFLQQWMNKIIP 1333
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRS 298
+ +E ++P + L G D D L+ + + K +++
Sbjct: 1334 R-LEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFVITKMIKT 1376
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 88 TPETQQDQLRQLKRFNVGED 107
+P QQ+Q R K+ N D
Sbjct: 587 SPNNQQNQKRLRKKINASSD 606
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 122 (48.0 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 46/179 (25%), Positives = 75/179 (41%)
Query: 24 DPEVGNYY--YGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYV 81
D ++ ++ + P P R+ L GLL + A + +L H+ +Y+
Sbjct: 91 DEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYI 150
Query: 82 SFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL---CD 138
+ + T + +LR L + + + +S C A GSV V G
Sbjct: 151 DLMET-TQYMNEGELRVLA--DTYDSVYLHPNSYS-CACLASGSVLRLVDAVLGAEIRNG 206
Query: 139 IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAF 195
+AI G HHA+ G+C N + +A ++H RVL VD D+HHG G + F
Sbjct: 207 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTF 264
>MGI|MGI:1913721 [details] [associations]
symbol:Anp32e "acidic (leucine-rich) nuclear phosphoprotein
32 family, member E" species:10090 "Mus musculus" [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019212 "phosphatase inhibitor activity" evidence=IDA]
[GO:0043086 "negative regulation of catalytic activity"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913721
GO:GO:0005634 GO:GO:0016023 eggNOG:NOG322008
GeneTree:ENSGT00560000077130 HOGENOM:HOG000007361
InterPro:IPR003603 SMART:SM00446 HOVERGEN:HBG053102
InterPro:IPR025875 Pfam:PF12799 CTD:81611 GO:GO:0019212 OMA:RCVNGEI
OrthoDB:EOG4HMJBK ChiTaRS:ANP32E EMBL:U89345 EMBL:AB037685
EMBL:AK012759 EMBL:AK049647 EMBL:AK076049 EMBL:AK088401
EMBL:AK147888 EMBL:AK168380 EMBL:BC005690 EMBL:BC080684
IPI:IPI00130016 IPI:IPI00277026 RefSeq:NP_001240686.1
RefSeq:NP_075699.3 UniGene:Mm.218657 ProteinModelPortal:P97822
SMR:P97822 STRING:P97822 PhosphoSite:P97822 PaxDb:P97822
PRIDE:P97822 Ensembl:ENSMUST00000015893 Ensembl:ENSMUST00000165307
GeneID:66471 KEGG:mmu:66471 UCSC:uc008qlu.2 UCSC:uc008qlv.2
InParanoid:P97822 NextBio:321786 Bgee:P97822 Genevestigator:P97822
GermOnline:ENSMUSG00000015749 Uniprot:P97822
Length = 260
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 58/222 (26%), Positives = 90/222 (40%)
Query: 277 DRLGCFNLSIKGHAECVK---FMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEV- 332
D C N I+G + K F+ NV L L ++ + + + ++ G+EV
Sbjct: 25 DNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARLP-SLNKLRKLELSDNIISGGLEVL 83
Query: 333 DDKMPQHEYYEYFG---PDYTLHVAPSNMENKNSRQL-------LEEIRNKLLEYLSKLQ 382
+K P Y G D + A N++N S L LE+ R + E L ++
Sbjct: 84 AEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLFNCEITNLEDYRESIFELLQQIT 143
Query: 383 HAPSV-QFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERVKREAVEPEQKDREGLK 441
+ Q PDSE E D+D EDGDE + D D D E E + +D G +
Sbjct: 144 YLDGFDQEDNEAPDSE--EEDDDDEDGDED-EEDEDEDEAGPPEGYEEEEDDDEDEAGSE 200
Query: 442 -GMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQENM 482
G E+ G + D I + D + E + E+E +
Sbjct: 201 VGEGEEEVGLSYLMKDEIQDEEDDDDYVDEGEEEEEEEEEGL 242
>UNIPROTKB|F5H6R5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 IPI:IPI00790809
ProteinModelPortal:F5H6R5 SMR:F5H6R5 Ensembl:ENST00000446613
UCSC:uc011aux.2 ArrayExpress:F5H6R5 Bgee:F5H6R5 Uniprot:F5H6R5
Length = 155
Score = 105 (42.0 bits), Expect = 0.00069, P = 0.00069
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 234 VPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKG---HA 290
V L+ G +D+ Y + I K ++ P VV G D L GDRLG ++S G
Sbjct: 31 VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRD 90
Query: 291 ECV-KFMRSFNVPLLLLGGGGYTIR 314
E V + +R VP+L++ GGY R
Sbjct: 91 ELVFRMVRGRRVPILMVTSGGYQKR 115
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 493 493 0.00083 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 232
No. of states in DFA: 619 (66 KB)
Total size of DFA: 322 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.19u 0.14s 50.33t Elapsed: 00:00:03
Total cpu time: 50.25u 0.14s 50.39t Elapsed: 00:00:03
Start: Mon May 20 19:55:19 2013 End: Mon May 20 19:55:22 2013
WARNINGS ISSUED: 1