Query 011112
Match_columns 493
No_of_seqs 132 out of 1462
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:15:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011112.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011112hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03092 BT1: BT1 family; Int 100.0 1E-41 2.2E-46 352.2 39.4 412 23-489 1-417 (433)
2 TIGR00788 fbt folate/biopterin 100.0 7.5E-40 1.6E-44 342.4 41.0 424 8-486 22-447 (468)
3 COG2814 AraJ Arabinose efflux 100.0 5.6E-30 1.2E-34 254.6 33.3 370 6-481 8-382 (394)
4 PRK11010 ampG muropeptide tran 100.0 2.3E-29 4.9E-34 265.2 37.4 393 6-485 7-403 (491)
5 PRK11902 ampG muropeptide tran 100.0 9.1E-29 2E-33 254.6 36.4 383 16-485 4-390 (402)
6 PRK03545 putative arabinose tr 100.0 6.4E-28 1.4E-32 247.2 33.8 354 6-456 4-359 (390)
7 TIGR02718 sider_RhtX_FptX side 100.0 3.1E-26 6.8E-31 234.7 36.3 363 13-455 3-369 (390)
8 PRK11663 regulatory protein Uh 100.0 4.4E-27 9.5E-32 244.5 30.3 375 10-455 22-402 (434)
9 TIGR00891 2A0112 putative sial 100.0 1.5E-26 3.2E-31 237.0 33.7 379 7-454 8-392 (405)
10 PRK12307 putative sialic acid 100.0 9.6E-27 2.1E-31 241.1 32.4 367 8-455 15-386 (426)
11 COG2271 UhpC Sugar phosphate p 100.0 1E-27 2.2E-32 235.5 23.5 375 8-456 26-413 (448)
12 PRK14995 methyl viologen resis 100.0 1.6E-26 3.5E-31 244.2 34.0 390 10-451 5-412 (495)
13 TIGR00792 gph sugar (Glycoside 100.0 3E-26 6.5E-31 238.1 33.5 384 27-489 16-425 (437)
14 TIGR00899 2A0120 sugar efflux 100.0 2.4E-26 5.2E-31 233.5 31.7 368 17-486 3-375 (375)
15 TIGR00900 2A0121 H+ Antiporter 100.0 2.8E-26 6.1E-31 231.3 31.4 355 17-454 5-365 (365)
16 PRK10504 putative transporter; 100.0 6.3E-26 1.4E-30 238.3 34.7 392 12-456 11-419 (471)
17 PRK11551 putative 3-hydroxyphe 100.0 5.5E-26 1.2E-30 233.9 33.1 357 8-453 12-371 (406)
18 PRK10213 nepI ribonucleoside t 100.0 9.9E-26 2.2E-30 231.3 34.8 349 9-455 18-369 (394)
19 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.5E-26 3.2E-31 238.8 28.5 381 6-454 3-397 (412)
20 PRK09556 uhpT sugar phosphate 100.0 1.3E-26 2.7E-31 243.3 27.2 376 10-451 28-411 (467)
21 TIGR01299 synapt_SV2 synaptic 100.0 5.9E-26 1.3E-30 246.2 32.3 183 8-203 164-361 (742)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 4.2E-26 9.1E-31 230.9 28.3 336 31-455 23-360 (377)
23 TIGR00901 2A0125 AmpG-related 100.0 7.1E-26 1.5E-30 229.0 29.4 335 29-437 7-356 (356)
24 TIGR00903 2A0129 major facilit 100.0 1E-25 2.2E-30 228.7 30.6 328 30-450 10-340 (368)
25 PRK10489 enterobactin exporter 100.0 1.3E-25 2.8E-30 232.2 31.5 379 16-488 22-403 (417)
26 PRK10406 alpha-ketoglutarate t 100.0 2.7E-25 5.8E-30 231.0 33.8 352 17-454 28-400 (432)
27 PRK10091 MFS transport protein 99.9 2.3E-25 5.1E-30 227.7 32.1 342 13-452 5-350 (382)
28 TIGR00893 2A0114 d-galactonate 99.9 1.6E-26 3.4E-31 235.0 22.8 368 20-454 3-375 (399)
29 PRK11273 glpT sn-glycerol-3-ph 99.9 2.6E-25 5.7E-30 232.4 32.6 356 33-455 51-413 (452)
30 PRK10642 proline/glycine betai 99.9 7.7E-25 1.7E-29 231.2 36.1 370 11-453 16-405 (490)
31 TIGR00710 efflux_Bcr_CflA drug 99.9 6.9E-25 1.5E-29 223.5 33.9 350 11-447 5-356 (385)
32 TIGR00711 efflux_EmrB drug res 99.9 2.8E-25 6.1E-30 233.9 31.5 388 13-452 4-410 (485)
33 TIGR00902 2A0127 phenyl propri 99.9 4.6E-25 1E-29 225.5 31.7 342 16-454 9-357 (382)
34 PRK15402 multidrug efflux syst 99.9 1E-24 2.2E-29 224.6 34.5 339 28-454 31-372 (406)
35 PRK05122 major facilitator sup 99.9 6.1E-25 1.3E-29 225.7 32.6 373 15-493 19-398 (399)
36 PRK11646 multidrug resistance 99.9 1.2E-24 2.5E-29 223.9 33.2 357 1-454 1-361 (400)
37 TIGR00881 2A0104 phosphoglycer 99.9 1E-25 2.2E-30 228.3 23.4 369 19-456 3-376 (379)
38 PRK10077 xylE D-xylose transpo 99.9 1.3E-24 2.9E-29 228.5 32.4 376 7-450 8-424 (479)
39 PRK09705 cynX putative cyanate 99.9 7.3E-25 1.6E-29 224.9 28.8 354 32-490 30-387 (393)
40 TIGR00897 2A0118 polyol permea 99.9 4.9E-24 1.1E-28 219.4 34.8 379 15-484 17-400 (402)
41 PRK09952 shikimate transporter 99.9 2.8E-24 6E-29 223.7 33.3 395 8-488 19-436 (438)
42 PRK15403 multidrug efflux syst 99.9 3.3E-24 7.2E-29 221.4 33.5 338 28-452 34-373 (413)
43 PRK12382 putative transporter; 99.9 2E-24 4.4E-29 221.3 30.9 360 16-481 20-385 (392)
44 PRK11195 lysophospholipid tran 99.9 3.9E-24 8.5E-29 219.4 32.9 352 13-456 5-359 (393)
45 PRK03893 putative sialic acid 99.9 1.8E-24 3.8E-29 228.6 31.1 397 8-455 17-431 (496)
46 TIGR00895 2A0115 benzoate tran 99.9 4.7E-25 1E-29 225.0 25.5 379 9-449 15-397 (398)
47 PRK11102 bicyclomycin/multidru 99.9 3.7E-24 8E-29 217.9 31.6 259 33-370 13-273 (377)
48 PRK03699 putative transporter; 99.9 1.2E-24 2.7E-29 223.3 28.0 354 7-456 3-359 (394)
49 TIGR00712 glpT glycerol-3-phos 99.9 1.6E-24 3.6E-29 225.5 29.3 373 14-455 30-411 (438)
50 PRK15011 sugar efflux transpor 99.9 6.8E-24 1.5E-28 217.7 33.0 374 8-486 13-392 (393)
51 PRK10054 putative transporter; 99.9 4.5E-24 9.8E-29 219.2 31.2 349 13-456 9-363 (395)
52 TIGR00887 2A0109 phosphate:H+ 99.9 3.4E-24 7.5E-29 226.9 31.1 426 8-490 13-494 (502)
53 PRK11652 emrD multidrug resist 99.9 1.4E-23 3.1E-28 215.2 34.3 352 9-451 6-359 (394)
54 PF07690 MFS_1: Major Facilita 99.9 3.7E-25 8E-30 222.2 21.1 347 17-443 2-352 (352)
55 PRK09669 putative symporter Ya 99.9 2.3E-23 4.9E-28 217.3 34.7 348 28-456 27-392 (444)
56 PRK09874 drug efflux system pr 99.9 1.3E-23 2.9E-28 216.1 31.8 372 8-481 10-394 (408)
57 PRK10473 multidrug efflux syst 99.9 4.9E-23 1.1E-27 211.1 35.4 351 33-485 25-377 (392)
58 PRK03633 putative MFS family t 99.9 2.9E-23 6.3E-28 212.1 33.4 340 13-455 8-350 (381)
59 PRK11043 putative transporter; 99.9 4.9E-23 1.1E-27 211.8 35.1 327 34-451 29-356 (401)
60 COG2211 MelB Na+/melibiose sym 99.9 3E-23 6.6E-28 210.6 32.8 395 7-477 8-422 (467)
61 PRK11128 putative 3-phenylprop 99.9 1.9E-23 4.1E-28 213.5 31.2 339 20-454 13-357 (382)
62 TIGR00879 SP MFS transporter, 99.9 1.1E-23 2.3E-28 220.0 29.5 393 21-455 38-448 (481)
63 PRK15075 citrate-proton sympor 99.9 1.9E-23 4E-28 217.3 30.4 366 7-455 11-397 (434)
64 PRK10429 melibiose:sodium symp 99.9 2.1E-22 4.6E-27 211.6 36.9 364 21-457 16-398 (473)
65 PRK10133 L-fucose transporter; 99.9 9.7E-23 2.1E-27 211.9 33.6 349 16-454 31-409 (438)
66 PRK09528 lacY galactoside perm 99.9 2.2E-23 4.8E-28 215.8 26.4 367 9-455 8-381 (420)
67 TIGR00892 2A0113 monocarboxyla 99.9 1.9E-22 4.1E-27 210.9 30.6 352 30-454 39-397 (455)
68 PF05977 MFS_3: Transmembrane 99.9 8.2E-22 1.8E-26 207.2 34.0 362 10-456 9-373 (524)
69 cd06174 MFS The Major Facilita 99.9 1.9E-22 4.2E-27 201.7 27.8 342 16-481 4-348 (352)
70 TIGR00898 2A0119 cation transp 99.9 1.5E-22 3.2E-27 214.6 28.4 379 35-489 113-499 (505)
71 TIGR00889 2A0110 nucleoside tr 99.9 6.5E-22 1.4E-26 204.6 31.8 351 17-455 8-374 (418)
72 PF13347 MFS_2: MFS/sugar tran 99.9 6.7E-23 1.4E-27 212.8 24.2 352 28-458 19-390 (428)
73 TIGR00882 2A0105 oligosacchari 99.9 2.5E-22 5.5E-27 206.2 27.6 361 11-455 2-373 (396)
74 PRK09848 glucuronide transport 99.9 1.4E-21 3.1E-26 204.0 32.7 381 28-489 26-432 (448)
75 TIGR00886 2A0108 nitrite extru 99.9 1.5E-22 3.3E-27 204.9 24.2 348 14-438 4-365 (366)
76 TIGR00894 2A0114euk Na(+)-depe 99.9 4.8E-23 1E-27 216.1 20.5 370 40-485 70-450 (465)
77 PRK06814 acylglycerophosphoeth 99.9 6.9E-22 1.5E-26 229.1 32.1 330 46-451 52-395 (1140)
78 TIGR00883 2A0106 metabolite-pr 99.9 2.4E-22 5.3E-27 204.6 25.0 340 33-454 15-377 (394)
79 PRK15034 nitrate/nitrite trans 99.9 2.2E-21 4.9E-26 199.6 31.7 380 5-479 28-451 (462)
80 PRK11462 putative transporter; 99.9 8.8E-21 1.9E-25 198.4 36.0 349 27-457 26-392 (460)
81 PLN00028 nitrate transmembrane 99.9 1.2E-21 2.7E-26 205.9 29.4 263 21-357 46-318 (476)
82 PF03825 Nuc_H_symport: Nucleo 99.9 9.3E-21 2E-25 193.6 33.5 382 17-489 8-400 (400)
83 PRK08633 2-acyl-glycerophospho 99.9 4.1E-21 8.9E-26 222.9 32.7 363 8-451 6-383 (1146)
84 TIGR00885 fucP L-fucose:H+ sym 99.9 4.1E-20 8.9E-25 190.6 33.8 351 13-454 5-383 (410)
85 TIGR00896 CynX cyanate transpo 99.9 3.9E-21 8.4E-26 194.3 24.3 325 31-454 20-350 (355)
86 TIGR00924 yjdL_sub1_fam amino 99.9 3.6E-20 7.7E-25 194.5 29.6 171 10-188 9-183 (475)
87 PRK10207 dipeptide/tripeptide 99.9 3.2E-20 6.9E-25 195.2 28.9 168 9-184 12-181 (489)
88 PF11700 ATG22: Vacuole efflux 99.9 1.9E-19 4.2E-24 187.4 33.8 363 49-488 73-471 (477)
89 COG2223 NarK Nitrate/nitrite t 99.9 6.9E-21 1.5E-25 187.8 20.5 363 5-454 8-377 (417)
90 PF03209 PUCC: PUCC protein; 99.9 1.1E-18 2.4E-23 172.9 35.1 373 38-485 7-398 (403)
91 KOG3764 Vesicular amine transp 99.9 5.4E-22 1.2E-26 193.0 10.6 328 40-456 100-433 (464)
92 KOG1330 Sugar transporter/spin 99.9 1.5E-22 3.2E-27 201.0 6.6 176 15-203 37-216 (493)
93 KOG0569 Permease of the major 99.9 2.6E-19 5.6E-24 183.7 28.3 393 37-491 45-461 (485)
94 KOG2532 Permease of the major 99.8 2.5E-20 5.5E-25 192.9 17.8 365 39-481 66-443 (466)
95 TIGR01301 GPH_sucrose GPH fami 99.8 2E-17 4.3E-22 171.5 33.9 397 28-489 22-476 (477)
96 PF01306 LacY_symp: LacY proto 99.8 2E-18 4.4E-23 173.9 25.2 363 12-456 8-379 (412)
97 PRK09584 tppB putative tripept 99.8 1.2E-17 2.7E-22 176.4 30.1 170 11-188 21-192 (500)
98 TIGR00805 oat sodium-independe 99.8 4.3E-19 9.2E-24 191.9 16.6 307 10-370 31-412 (633)
99 KOG2533 Permease of the major 99.8 1.7E-18 3.7E-23 179.8 19.6 294 15-371 49-357 (495)
100 PF13000 Acatn: Acetyl-coenzym 99.8 7.5E-17 1.6E-21 162.0 25.3 399 15-456 4-471 (544)
101 KOG2615 Permease of the major 99.8 3.4E-17 7.3E-22 158.8 21.5 332 42-451 64-413 (451)
102 KOG0254 Predicted transporter 99.8 3.4E-16 7.4E-21 166.2 30.7 384 47-490 90-489 (513)
103 COG0738 FucP Fucose permease [ 99.8 2.5E-16 5.4E-21 154.8 26.1 358 6-456 9-388 (422)
104 COG2270 Permeases of the major 99.8 1.9E-16 4.2E-21 156.5 23.8 371 29-487 34-431 (438)
105 PRK15462 dipeptide/tripeptide 99.7 9.8E-16 2.1E-20 159.5 27.9 168 9-184 7-176 (493)
106 KOG0252 Inorganic phosphate tr 99.7 1.7E-17 3.8E-22 164.4 13.4 421 8-490 35-503 (538)
107 KOG0255 Synaptic vesicle trans 99.7 6.5E-16 1.4E-20 164.5 26.4 379 39-490 111-498 (521)
108 KOG3574 Acetyl-CoA transporter 99.7 4.6E-16 1E-20 150.3 20.7 366 12-458 32-437 (510)
109 KOG0253 Synaptic vesicle trans 99.7 3.3E-15 7.2E-20 144.2 24.9 400 8-446 75-490 (528)
110 PF00083 Sugar_tr: Sugar (and 99.7 1.2E-20 2.6E-25 197.0 -15.3 386 47-490 47-442 (451)
111 KOG2504 Monocarboxylate transp 99.7 2.2E-15 4.7E-20 158.1 22.2 367 34-454 69-452 (509)
112 TIGR00806 rfc RFC reduced fola 99.7 1.7E-14 3.8E-19 146.5 26.6 177 10-201 25-207 (511)
113 COG2807 CynX Cyanate permease 99.6 5.2E-14 1.1E-18 136.6 23.5 325 31-454 32-361 (395)
114 PF06609 TRI12: Fungal trichot 99.6 7.9E-14 1.7E-18 147.0 26.0 377 31-450 64-465 (599)
115 KOG4686 Predicted sugar transp 99.6 3.3E-15 7.1E-20 139.3 10.5 369 31-489 64-447 (459)
116 TIGR01272 gluP glucose/galacto 99.6 1.9E-13 4.1E-18 135.6 22.0 265 106-455 9-293 (310)
117 COG3104 PTR2 Dipeptide/tripept 99.5 5.4E-13 1.2E-17 135.0 19.7 175 9-190 19-199 (498)
118 PTZ00207 hypothetical protein; 99.5 6.2E-11 1.3E-15 125.9 33.7 155 33-198 49-207 (591)
119 KOG2816 Predicted transporter 99.4 5.2E-10 1.1E-14 115.8 28.6 313 58-452 75-392 (463)
120 PF03137 OATP: Organic Anion T 99.4 6.7E-14 1.5E-18 148.0 -0.9 392 13-452 5-514 (539)
121 TIGR00889 2A0110 nucleoside tr 99.3 1.5E-10 3.2E-15 119.9 19.3 179 16-203 213-409 (418)
122 KOG2325 Predicted transporter/ 99.3 6.7E-11 1.4E-15 121.2 15.3 189 7-203 30-236 (488)
123 PRK15011 sugar efflux transpor 99.3 3.5E-10 7.7E-15 116.1 21.0 157 29-198 235-392 (393)
124 TIGR00899 2A0120 sugar efflux 99.3 3.7E-10 8E-15 114.6 20.5 157 29-198 218-375 (375)
125 PRK10489 enterobactin exporter 99.3 6.9E-10 1.5E-14 114.8 21.7 161 30-202 243-405 (417)
126 PRK09556 uhpT sugar phosphate 99.2 5.2E-10 1.1E-14 117.6 19.7 177 8-194 255-446 (467)
127 TIGR00892 2A0113 monocarboxyla 99.2 2E-10 4.4E-15 120.2 16.4 174 9-191 239-415 (455)
128 TIGR00890 2A0111 Oxalate/Forma 99.2 4.3E-10 9.3E-15 113.6 17.9 170 8-188 202-373 (377)
129 PRK10642 proline/glycine betai 99.2 1.4E-09 3.1E-14 115.0 21.6 166 28-203 268-436 (490)
130 PRK03545 putative arabinose tr 99.2 1.5E-09 3.2E-14 111.2 21.0 175 6-193 200-376 (390)
131 cd06174 MFS The Major Facilita 99.2 9.3E-10 2E-14 109.8 18.9 167 16-194 180-349 (352)
132 KOG2563 Permease of the major 99.2 2.5E-09 5.4E-14 107.0 20.5 367 5-453 37-422 (480)
133 TIGR00880 2_A_01_02 Multidrug 99.2 3.5E-10 7.6E-15 97.0 11.9 125 62-198 15-140 (141)
134 PRK11663 regulatory protein Uh 99.2 1.9E-09 4.1E-14 112.2 19.6 177 11-194 243-421 (434)
135 KOG3626 Organic anion transpor 99.2 4.6E-10 9.9E-15 119.6 14.5 307 10-370 96-474 (735)
136 TIGR00897 2A0118 polyol permea 99.1 3.9E-09 8.4E-14 108.7 21.1 180 7-196 218-400 (402)
137 PRK09528 lacY galactoside perm 99.1 1.1E-09 2.3E-14 113.5 16.6 157 32-200 245-407 (420)
138 TIGR00902 2A0127 phenyl propri 99.1 4.7E-09 1E-13 107.3 21.0 173 5-192 199-374 (382)
139 PRK09705 cynX putative cyanate 99.1 3.7E-09 8.1E-14 108.5 20.1 182 9-203 203-388 (393)
140 PRK11273 glpT sn-glycerol-3-ph 99.1 4.2E-09 9E-14 110.2 20.7 186 9-202 251-442 (452)
141 PRK03699 putative transporter; 99.1 2.2E-09 4.7E-14 110.3 18.1 172 13-197 207-380 (394)
142 TIGR00893 2A0114 d-galactonate 99.1 2.9E-09 6.3E-14 107.9 18.7 177 8-192 212-394 (399)
143 PRK05122 major facilitator sup 99.1 4.8E-09 1E-13 107.7 20.3 155 31-200 237-392 (399)
144 TIGR00883 2A0106 metabolite-pr 99.1 1.7E-09 3.8E-14 109.8 16.8 163 13-185 221-389 (394)
145 PRK11010 ampG muropeptide tran 99.1 4.9E-09 1.1E-13 110.8 20.3 161 28-199 240-405 (491)
146 PRK03633 putative MFS family t 99.1 7.2E-09 1.6E-13 105.9 20.2 149 30-194 220-369 (381)
147 COG2271 UhpC Sugar phosphate p 99.1 3.5E-09 7.6E-14 105.3 16.4 178 7-192 248-429 (448)
148 PRK09952 shikimate transporter 99.1 1.1E-08 2.4E-13 106.6 21.1 165 28-200 268-436 (438)
149 PRK03893 putative sialic acid 99.1 6.1E-09 1.3E-13 110.1 19.2 149 30-188 295-444 (496)
150 TIGR01299 synapt_SV2 synaptic 99.1 1E-08 2.2E-13 112.3 21.2 133 56-201 605-738 (742)
151 PRK09874 drug efflux system pr 99.1 6.6E-09 1.4E-13 106.8 18.9 152 30-194 239-395 (408)
152 PRK11551 putative 3-hydroxyphe 99.1 1.1E-08 2.3E-13 105.3 19.8 156 28-196 238-395 (406)
153 KOG3762 Predicted transporter 99.0 3.5E-09 7.7E-14 107.8 14.7 191 280-486 360-552 (618)
154 PF05631 DUF791: Protein of un 99.0 5.4E-07 1.2E-11 88.7 28.6 178 8-199 35-219 (354)
155 TIGR00712 glpT glycerol-3-phos 99.0 1.1E-08 2.4E-13 106.5 17.4 183 9-201 249-438 (438)
156 TIGR00879 SP MFS transporter, 99.0 5.6E-09 1.2E-13 108.9 14.9 158 35-201 308-475 (481)
157 COG2223 NarK Nitrate/nitrite t 99.0 8.3E-09 1.8E-13 102.7 14.8 181 3-193 210-397 (417)
158 PRK12382 putative transporter; 99.0 3.1E-08 6.7E-13 101.5 19.6 150 29-193 235-385 (392)
159 PRK15402 multidrug efflux syst 99.0 6.7E-08 1.5E-12 99.5 21.0 173 8-189 212-387 (406)
160 TIGR00900 2A0121 H+ Antiporter 99.0 3.2E-08 7E-13 99.5 18.1 156 8-174 207-365 (365)
161 PRK10504 putative transporter; 99.0 7.6E-08 1.6E-12 101.2 21.5 159 9-176 259-419 (471)
162 PF05977 MFS_3: Transmembrane 99.0 1.4E-07 3E-12 99.8 23.4 152 29-192 237-389 (524)
163 TIGR00881 2A0104 phosphoglycer 99.0 1.6E-08 3.4E-13 102.2 15.6 163 9-179 214-379 (379)
164 PRK11902 ampG muropeptide tran 98.9 6.2E-08 1.4E-12 99.7 20.0 149 34-193 233-386 (402)
165 PF06963 FPN1: Ferroportin1 (F 98.9 2E-06 4.3E-11 88.3 30.6 381 12-444 3-410 (432)
166 TIGR00891 2A0112 putative sial 98.9 2.2E-08 4.8E-13 102.3 16.5 142 29-181 257-400 (405)
167 PLN00028 nitrate transmembrane 98.9 1.3E-08 2.8E-13 107.3 14.9 181 8-197 249-433 (476)
168 PRK10406 alpha-ketoglutarate t 98.9 7.1E-08 1.5E-12 100.3 20.3 183 7-198 238-425 (432)
169 COG2814 AraJ Arabinose efflux 98.9 9.5E-08 2.1E-12 96.0 19.3 176 6-194 206-383 (394)
170 TIGR02718 sider_RhtX_FptX side 98.9 8.7E-08 1.9E-12 98.2 19.6 174 8-189 205-383 (390)
171 PRK10054 putative transporter; 98.9 9E-09 1.9E-13 105.8 12.2 134 311-455 27-160 (395)
172 PRK10213 nepI ribonucleoside t 98.9 2.1E-07 4.6E-12 95.6 21.5 171 7-190 212-384 (394)
173 PRK11128 putative 3-phenylprop 98.9 1.7E-07 3.8E-12 95.7 20.7 166 7-187 201-369 (382)
174 TIGR00792 gph sugar (Glycoside 98.9 5.9E-08 1.3E-12 100.8 17.0 159 8-175 219-383 (437)
175 TIGR00882 2A0105 oligosacchari 98.8 1.8E-07 3.8E-12 96.1 19.0 148 32-191 237-389 (396)
176 TIGR00710 efflux_Bcr_CflA drug 98.8 2.5E-08 5.4E-13 101.4 12.5 128 318-455 31-158 (385)
177 TIGR00894 2A0114euk Na(+)-depe 98.8 1.3E-07 2.9E-12 99.2 18.4 185 7-196 257-449 (465)
178 TIGR00903 2A0129 major facilit 98.8 2.8E-07 6E-12 93.8 19.5 182 4-199 185-367 (368)
179 PRK10091 MFS transport protein 98.8 4E-07 8.6E-12 93.1 20.7 149 31-191 220-370 (382)
180 TIGR00711 efflux_EmrB drug res 98.8 2.4E-07 5.1E-12 97.6 17.9 158 9-174 253-412 (485)
181 PRK15075 citrate-proton sympor 98.8 4.3E-07 9.2E-12 94.6 19.5 140 28-176 256-398 (434)
182 PRK12307 putative sialic acid 98.8 5.9E-07 1.3E-11 93.0 20.1 144 29-183 250-394 (426)
183 TIGR00896 CynX cyanate transpo 98.8 3.3E-07 7.1E-12 92.6 17.5 156 7-174 193-350 (355)
184 TIGR02332 HpaX 4-hydroxyphenyl 98.8 1.9E-07 4.1E-12 96.5 16.0 162 13-185 244-409 (412)
185 PF07690 MFS_1: Major Facilita 98.8 5.3E-08 1.2E-12 97.4 11.5 129 317-455 22-150 (352)
186 PF01770 Folate_carrier: Reduc 98.8 3.8E-06 8.2E-11 85.0 24.6 171 15-201 9-186 (412)
187 PF11700 ATG22: Vacuole efflux 98.8 9.1E-07 2E-11 92.7 20.9 171 23-200 295-471 (477)
188 TIGR00924 yjdL_sub1_fam amino 98.7 4.3E-08 9.2E-13 103.2 10.8 136 310-455 29-170 (475)
189 TIGR01272 gluP glucose/galacto 98.7 7.7E-07 1.7E-11 88.3 19.1 162 7-183 136-301 (310)
190 TIGR00886 2A0108 nitrite extru 98.7 1.1E-07 2.3E-12 96.2 12.8 130 314-453 24-153 (366)
191 PRK11646 multidrug resistance 98.7 3.5E-07 7.7E-12 94.1 16.8 147 31-189 229-380 (400)
192 PRK10077 xylE D-xylose transpo 98.7 3.7E-07 8.1E-12 96.0 17.2 158 35-201 295-462 (479)
193 PRK06814 acylglycerophosphoeth 98.7 6.1E-07 1.3E-11 104.7 19.2 173 8-188 222-413 (1140)
194 TIGR00895 2A0115 benzoate tran 98.7 9.7E-07 2.1E-11 89.8 17.9 129 28-169 268-397 (398)
195 PRK08633 2-acyl-glycerophospho 98.7 9.1E-07 2E-11 103.3 20.0 167 9-187 230-400 (1146)
196 PRK10473 multidrug efflux syst 98.7 1.9E-07 4E-12 95.7 12.6 126 319-454 30-155 (392)
197 PRK09848 glucuronide transport 98.7 8E-07 1.7E-11 92.9 17.3 162 7-175 224-391 (448)
198 TIGR00898 2A0119 cation transp 98.7 1.2E-06 2.5E-11 93.1 18.6 148 39-201 351-499 (505)
199 TIGR00887 2A0109 phosphate:H+ 98.7 5.1E-07 1.1E-11 95.8 15.6 133 62-202 352-494 (502)
200 PRK14995 methyl viologen resis 98.6 9.4E-07 2E-11 93.7 17.5 156 8-172 256-413 (495)
201 PRK11043 putative transporter; 98.6 4.5E-07 9.9E-12 93.1 12.8 127 319-455 33-159 (401)
202 PRK15034 nitrate/nitrite trans 98.6 3E-06 6.6E-11 87.9 18.5 185 3-194 244-451 (462)
203 KOG4686 Predicted sugar transp 98.6 3.1E-06 6.8E-11 80.0 16.3 136 35-183 289-428 (459)
204 PRK10207 dipeptide/tripeptide 98.6 2.8E-07 6.1E-12 97.3 10.4 133 314-455 37-172 (489)
205 KOG2504 Monocarboxylate transp 98.6 1.5E-06 3.3E-11 91.7 15.7 178 9-197 296-476 (509)
206 PRK09584 tppB putative tripept 98.6 4.6E-07 9.9E-12 96.1 11.8 159 288-455 17-179 (500)
207 PRK15462 dipeptide/tripeptide 98.5 3.3E-07 7.2E-12 96.0 10.4 133 314-455 32-167 (493)
208 PRK11195 lysophospholipid tran 98.5 5E-06 1.1E-10 85.4 18.7 139 31-183 226-366 (393)
209 PRK10133 L-fucose transporter; 98.5 5E-06 1.1E-10 86.7 18.6 139 31-184 279-420 (438)
210 PRK15403 multidrug efflux syst 98.5 1.3E-06 2.7E-11 90.5 13.8 151 319-487 43-194 (413)
211 PF03825 Nuc_H_symport: Nucleo 98.5 1.2E-05 2.5E-10 82.6 20.7 159 8-178 204-370 (400)
212 PRK09669 putative symporter Ya 98.5 4.8E-06 1E-10 86.9 18.1 163 5-175 223-391 (444)
213 TIGR00806 rfc RFC reduced fola 98.5 8.3E-07 1.8E-11 91.1 11.7 153 316-485 50-203 (511)
214 PF02487 CLN3: CLN3 protein; 98.5 5E-05 1.1E-09 76.9 23.8 128 54-198 67-197 (402)
215 PRK11102 bicyclomycin/multidru 98.5 1.4E-05 3E-10 81.2 20.2 128 32-168 216-345 (377)
216 PRK11652 emrD multidrug resist 98.5 1.5E-06 3.2E-11 89.1 12.6 127 319-455 35-161 (394)
217 PF13347 MFS_2: MFS/sugar tran 98.5 2.8E-06 6E-11 88.3 14.7 161 7-175 221-387 (428)
218 KOG2532 Permease of the major 98.5 4.9E-06 1.1E-10 86.8 16.2 180 8-193 255-443 (466)
219 TIGR00885 fucP L-fucose:H+ sym 98.4 1.5E-06 3.4E-11 89.7 12.2 128 317-451 28-155 (410)
220 TIGR00880 2_A_01_02 Multidrug 98.4 1.3E-06 2.8E-11 74.6 8.8 109 336-454 7-115 (141)
221 PRK10429 melibiose:sodium symp 98.4 1E-05 2.2E-10 85.3 17.0 159 9-175 229-396 (473)
222 TIGR00901 2A0125 AmpG-related 98.4 6.6E-06 1.4E-10 83.0 15.0 135 13-156 211-355 (356)
223 TIGR00769 AAA ADP/ATP carrier 98.4 0.00044 9.4E-09 72.1 28.5 147 11-170 7-189 (472)
224 KOG0637 Sucrose transporter an 98.4 2.5E-06 5.4E-11 85.9 11.5 136 31-169 53-202 (498)
225 PF06813 Nodulin-like: Nodulin 98.3 2.9E-05 6.4E-10 73.9 16.9 160 30-199 21-184 (250)
226 COG2270 Permeases of the major 98.3 2.3E-05 5.1E-10 78.5 16.5 166 21-199 264-431 (438)
227 TIGR01301 GPH_sucrose GPH fami 98.3 5.4E-06 1.2E-10 86.6 11.7 172 315-487 28-221 (477)
228 COG2807 CynX Cyanate permease 98.3 5.1E-05 1.1E-09 74.7 17.5 173 8-192 205-380 (395)
229 TIGR00926 2A1704 Peptide:H+ sy 98.3 1.8E-05 3.9E-10 85.9 15.9 155 34-192 11-177 (654)
230 KOG0569 Permease of the major 98.2 6.6E-05 1.4E-09 78.0 17.5 177 16-203 274-461 (485)
231 PF01306 LacY_symp: LacY proto 98.2 0.0002 4.2E-09 73.0 19.6 185 4-201 213-405 (412)
232 COG0477 ProP Permeases of the 98.2 0.00024 5.1E-09 68.3 19.7 157 20-186 11-174 (338)
233 KOG2615 Permease of the major 98.1 4.4E-06 9.6E-11 82.3 6.9 114 324-451 65-181 (451)
234 KOG3764 Vesicular amine transp 98.1 9.9E-06 2.1E-10 80.3 9.0 141 322-480 101-242 (464)
235 TIGR00805 oat sodium-independe 98.1 3.4E-06 7.4E-11 91.8 5.9 165 319-486 60-282 (633)
236 TIGR00788 fbt folate/biopterin 98.0 2.1E-05 4.6E-10 82.7 9.3 129 38-174 280-415 (468)
237 PRK11462 putative transporter; 98.0 0.00062 1.3E-08 71.5 20.3 161 7-175 224-390 (460)
238 COG2211 MelB Na+/melibiose sym 97.8 0.00039 8.5E-09 71.7 14.5 159 9-174 234-398 (467)
239 KOG3762 Predicted transporter 97.8 0.0002 4.3E-09 73.8 11.3 164 16-192 376-542 (618)
240 COG0738 FucP Fucose permease [ 97.7 0.00024 5.3E-09 71.0 11.2 140 304-451 25-165 (422)
241 KOG0255 Synaptic vesicle trans 97.7 0.00021 4.6E-09 76.2 11.4 148 320-488 111-258 (521)
242 KOG3098 Uncharacterized conser 97.7 0.0097 2.1E-07 61.5 22.4 105 54-171 58-163 (461)
243 PF03209 PUCC: PUCC protein; 97.7 0.0032 6.9E-08 63.5 17.9 152 30-189 228-390 (403)
244 KOG1330 Sugar transporter/spin 97.6 6.4E-06 1.4E-10 83.2 -2.0 123 320-454 61-185 (493)
245 PF06609 TRI12: Fungal trichot 97.6 0.0027 5.8E-08 67.9 16.8 184 11-203 310-560 (599)
246 KOG2533 Permease of the major 97.6 0.00047 1E-08 72.4 10.9 160 319-490 73-233 (495)
247 KOG0254 Predicted transporter 97.5 0.00065 1.4E-08 72.4 11.0 144 328-488 90-233 (513)
248 PTZ00207 hypothetical protein; 97.5 0.00098 2.1E-08 71.5 11.8 127 318-450 53-180 (591)
249 PF00854 PTR2: POT family; In 97.4 0.00081 1.8E-08 68.5 10.5 110 82-191 3-117 (372)
250 COG3104 PTR2 Dipeptide/tripept 97.3 0.00048 1E-08 70.8 6.6 149 322-488 56-209 (498)
251 PF12832 MFS_1_like: MFS_1 lik 97.3 0.0012 2.5E-08 50.9 7.3 65 17-86 6-72 (77)
252 KOG2563 Permease of the major 97.3 0.0022 4.9E-08 65.0 11.0 164 321-492 74-242 (480)
253 PF06779 DUF1228: Protein of u 97.2 0.0019 4.2E-08 50.3 7.9 73 24-101 5-78 (85)
254 PF00083 Sugar_tr: Sugar (and 97.2 1.4E-05 3E-10 83.4 -6.1 151 325-487 44-194 (451)
255 KOG4332 Predicted sugar transp 97.1 0.014 3E-07 55.4 13.6 149 19-181 45-204 (454)
256 PF03219 TLC: TLC ATP/ADP tran 97.0 0.21 4.5E-06 52.6 23.0 153 9-171 22-205 (491)
257 PF05631 DUF791: Protein of un 96.9 0.019 4.1E-07 57.1 13.7 125 320-455 62-192 (354)
258 PF06813 Nodulin-like: Nodulin 96.9 0.01 2.2E-07 56.6 11.2 155 318-485 28-185 (250)
259 KOG0253 Synaptic vesicle trans 96.9 0.0011 2.3E-08 65.6 4.3 124 63-200 399-523 (528)
260 KOG2325 Predicted transporter/ 96.7 0.0087 1.9E-07 62.1 9.5 179 294-481 37-225 (488)
261 PF12832 MFS_1_like: MFS_1 lik 96.7 0.006 1.3E-07 46.9 6.3 56 311-367 20-75 (77)
262 PF05978 UNC-93: Ion channel r 96.6 0.1 2.2E-06 46.0 14.8 102 56-170 47-149 (156)
263 COG3202 ATP/ADP translocase [E 96.4 1.4 3.1E-05 45.7 27.7 150 10-172 26-210 (509)
264 TIGR00939 2a57 Equilibrative N 96.0 2.3 5E-05 44.3 25.1 115 333-448 313-430 (437)
265 KOG0252 Inorganic phosphate tr 96.0 0.0045 9.8E-08 63.0 2.9 130 63-203 366-504 (538)
266 PF03092 BT1: BT1 family; Int 96.0 0.044 9.6E-07 57.0 10.4 133 315-455 13-153 (433)
267 TIGR00926 2A1704 Peptide:H+ sy 96.0 0.059 1.3E-06 58.9 11.4 161 316-481 12-178 (654)
268 KOG3810 Micronutrient transpor 95.9 0.11 2.4E-06 51.3 11.5 123 67-202 64-188 (433)
269 PRK03612 spermidine synthase; 95.8 0.92 2E-05 48.4 19.7 160 16-185 19-185 (521)
270 PF05978 UNC-93: Ion channel r 94.9 0.19 4.2E-06 44.2 9.1 104 336-450 46-149 (156)
271 TIGR00769 AAA ADP/ATP carrier 94.9 0.85 1.8E-05 47.8 15.3 127 325-451 41-190 (472)
272 KOG1237 H+/oligopeptide sympor 94.5 0.29 6.4E-06 52.6 10.9 156 31-190 58-238 (571)
273 KOG2816 Predicted transporter 94.3 0.17 3.7E-06 52.9 8.5 131 335-486 70-201 (463)
274 KOG1479 Nucleoside transporter 93.0 11 0.00023 38.6 18.2 32 336-369 292-323 (406)
275 KOG3098 Uncharacterized conser 92.7 6.6 0.00014 40.9 16.8 155 7-167 236-409 (461)
276 PF02487 CLN3: CLN3 protein; 92.2 4.1 8.9E-05 41.7 14.3 146 12-171 248-396 (402)
277 PF06779 DUF1228: Protein of u 92.0 0.47 1E-05 37.0 5.7 55 316-370 16-70 (85)
278 PF01770 Folate_carrier: Reduc 91.2 9.1 0.0002 39.3 15.6 124 315-452 27-155 (412)
279 PF03137 OATP: Organic Anion T 90.4 0.068 1.5E-06 57.2 -0.6 162 319-481 30-246 (539)
280 COG0477 ProP Permeases of the 88.9 4.1 9E-05 38.4 10.8 118 327-452 39-158 (338)
281 KOG3880 Predicted small molecu 88.7 0.69 1.5E-05 45.1 4.8 125 54-195 70-197 (409)
282 PF07672 MFS_Mycoplasma: Mycop 87.2 10 0.00022 36.3 11.6 31 419-449 235-265 (267)
283 KOG3626 Organic anion transpor 83.8 4.5 9.8E-05 44.4 8.5 69 8-76 389-460 (735)
284 KOG4332 Predicted sugar transp 83.8 15 0.00033 35.4 10.9 132 315-457 60-198 (454)
285 KOG0637 Sucrose transporter an 83.7 0.3 6.5E-06 50.1 -0.4 132 315-447 56-200 (498)
286 PF06963 FPN1: Ferroportin1 (F 80.8 57 0.0012 33.9 15.0 129 32-166 280-412 (432)
287 KOG2601 Iron transporter [Inor 76.4 94 0.002 31.7 16.1 171 9-188 25-217 (503)
288 PF00854 PTR2: POT family; In 73.9 8.3 0.00018 39.0 6.6 63 412-482 55-120 (372)
289 PF01733 Nucleoside_tran: Nucl 73.9 1.3 2.7E-05 43.9 0.6 113 333-446 188-304 (309)
290 PF07672 MFS_Mycoplasma: Mycop 70.9 62 0.0014 31.0 11.1 105 56-169 151-265 (267)
291 PRK03612 spermidine synthase; 70.4 37 0.00081 36.2 10.7 129 322-456 45-176 (521)
292 COG3202 ATP/ADP translocase [E 58.5 2.1E+02 0.0046 30.2 13.0 128 325-452 59-210 (509)
293 PF03219 TLC: TLC ATP/ADP tran 52.7 1.3E+02 0.0028 31.9 10.7 64 117-182 292-355 (491)
294 TIGR00939 2a57 Equilibrative N 51.0 1.3E+02 0.0029 31.3 10.5 57 108-167 373-429 (437)
295 TIGR02230 ATPase_gene1 F0F1-AT 42.1 1.3E+02 0.0028 24.3 6.7 35 150-184 47-85 (100)
296 TIGR01667 YCCS_YHJK integral m 35.1 2.3E+02 0.0051 31.5 9.8 59 59-121 37-95 (701)
297 TIGR01666 YCCS hypothetical me 33.0 3E+02 0.0065 30.7 10.1 58 61-122 39-96 (704)
298 PF13000 Acatn: Acetyl-coenzym 31.2 6.8E+02 0.015 26.7 12.6 57 115-174 413-469 (544)
299 PF06912 DUF1275: Protein of u 28.4 4.6E+02 0.0099 23.9 16.6 35 148-183 164-198 (209)
300 KOG3574 Acetyl-CoA transporter 25.3 4.4E+02 0.0095 27.2 8.7 54 124-180 386-439 (510)
301 KOG3810 Micronutrient transpor 22.7 5.8E+02 0.013 26.0 8.9 145 8-171 237-384 (433)
302 COG5336 Uncharacterized protei 21.4 1.8E+02 0.0038 23.8 4.2 43 51-97 48-90 (116)
303 PF04226 Transgly_assoc: Trans 20.4 2E+02 0.0043 19.6 3.8 30 161-190 6-39 (48)
No 1
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=100.00 E-value=1e-41 Score=352.24 Aligned_cols=412 Identities=37% Similarity=0.592 Sum_probs=347.1
Q ss_pred HhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcc
Q 011112 23 QGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNA 101 (493)
Q Consensus 23 ~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~ 101 (493)
||+.. +...++.+++++++|+++++.+.+.++..+||.+||++|.++|.+|++|+|||+|++++.++..++...++..+
T Consensus 1 qG~~~~l~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~ 80 (433)
T PF03092_consen 1 QGFAGGLSRLAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP 80 (433)
T ss_pred CChhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence 45554 78888999999999999999999999999999999999999999999999999999999999888777777776
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Q 011112 102 FFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLL 181 (493)
Q Consensus 102 ~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~ 181 (493)
..+.+.....++.++..+|.+.+|++.|+++.|..++||.+ ||..++..+.+..+|.+++..++|.+.+..+++..|.+
T Consensus 81 ~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i 159 (433)
T PF03092_consen 81 ASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLI 159 (433)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehH
Confidence 54456666777888899999999999999999999987755 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhcc
Q 011112 182 FTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQ 261 (493)
Q Consensus 182 ~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (493)
.+.++.+..+..++++|+++... +.+.....+ + + .+.
T Consensus 160 ~~~~~~l~~~~~~~~~~e~~~~~-~~~~~~~~~-------------~-----~--------~~~---------------- 196 (433)
T PF03092_consen 160 SAALPLLMLIVALFLLEERKVRP-ADEVFSFGK-------------E-----E--------VPC---------------- 196 (433)
T ss_pred HHHHHHHHHHHHHHhhhhccccc-cchhhcccc-------------c-----c--------cch----------------
Confidence 88887777766555544322211 000000000 0 0 000
Q ss_pred CCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHH-HHHHHHhcccCCCcceeeeeeccCC---CCHHHHHHHHHHHH
Q 011112 262 IPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMA-WFFLAHVAVPNLSTVMFYYQTEILN---LEASFLGTARVVGW 337 (493)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~g---~s~~~~gl~~~~~~ 337 (493)
.....|+..+++|+.+++|.++...+ +.++.............+|..+.++ +|+...|.+..++.
T Consensus 197 -----------~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~ 265 (433)
T PF03092_consen 197 -----------LFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGS 265 (433)
T ss_pred -----------hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHH
Confidence 00135777888999999999998877 5555343333333336677777777 99999999999999
Q ss_pred HHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhh
Q 011112 338 VGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQ 417 (493)
Q Consensus 338 ~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 417 (493)
++.++|..++.++.++.+.|+++....++..+.++..+.++.++|...|+++.+++++...+...++++.++|...+++|
T Consensus 266 ~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~ 345 (433)
T PF03092_consen 266 IASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAAR 345 (433)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888777888889988899999999999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCCCC
Q 011112 418 LCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKGAT 489 (493)
Q Consensus 418 ~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 489 (493)
+||++.|||.+++..++.|+|..++..++..+.+.+|+++.+|++++.++++++++.++|+.++++||++++
T Consensus 346 lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 346 LCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 999999999999999999999999999999999999998889999999999999999999999988887654
No 2
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=100.00 E-value=7.5e-40 Score=342.43 Aligned_cols=424 Identities=31% Similarity=0.488 Sum_probs=335.2
Q ss_pred hchhHHH-HHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCCCCchhHHHHH
Q 011112 8 FGVSFLW-LICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 8 ~~~~~~~-~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
++++..+ ++...|+.+|+.++...++.+++++++|+|+++++.+.++..+||.+||+||+++||+|++|+|||+|++++
T Consensus 22 ~~~~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~ 101 (468)
T TIGR00788 22 FHPRVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLS 101 (468)
T ss_pred CCcchHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHH
Confidence 4566665 445579999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSL-VPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 87 ~~l~~-~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
.++.. ++...++..+ +......+.+++.+++.+.+|++.|+++.|..+ |+++.++..+++.+...++|.++|+.+
T Consensus 102 ~~l~~~~~~~~l~~~~---~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 102 GLLGSAILYGLLPGKV---SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred HHHHHHHHHHhccccc---chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 87763 4333333222 234444557889999999999999999999998 456777778888888889999999999
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhh
Q 011112 166 GGYALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKK 245 (493)
Q Consensus 166 ~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (493)
+|.+.++++||.+|++.+.+.++..+..+++||+++....+. ++++ . .. .. ..+.
T Consensus 178 ~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~-----~~~~------------~-~~-~~------~~~~ 232 (468)
T TIGR00788 178 GGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRI-----GTYL------------E-MN-MA------LLTL 232 (468)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccc-----cccc------------h-hh-hh------hhhh
Confidence 999999999999999988877766555667888652110000 0000 0 00 00 0000
Q ss_pred hhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCC
Q 011112 246 NKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLE 325 (493)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s 325 (493)
...+..++..+++++.+++|.++..+++.++.+...++....++++.++.+|+|
T Consensus 233 --------------------------~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s 286 (468)
T TIGR00788 233 --------------------------GVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGG 286 (468)
T ss_pred --------------------------hHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCC
Confidence 000123444556777788999988777766633344555555555667789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHH
Q 011112 326 ASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQ 405 (493)
Q Consensus 326 ~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 405 (493)
+.+.|+...+.+++.+++....+++.+|.+.|+.+.++.++..++.+....+...++...+.++.+++++...+.++..+
T Consensus 287 ~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g 366 (468)
T TIGR00788 287 PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQ 366 (468)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHH
Confidence 99999998888899999999999999999999999999998887765544455566655556666667777788888888
Q ss_pred hhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhccc
Q 011112 406 FKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIP 485 (493)
Q Consensus 406 ~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (493)
+.++|.++++++.+|++.+|+.+++++++.++|..+++.+++.+.+.+|...++|++++..+.++.++.++++.++.++|
T Consensus 367 ~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP 446 (468)
T TIGR00788 367 LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLP 446 (468)
T ss_pred HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred C
Q 011112 486 K 486 (493)
Q Consensus 486 ~ 486 (493)
+
T Consensus 447 ~ 447 (468)
T TIGR00788 447 R 447 (468)
T ss_pred C
Confidence 5
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-30 Score=254.63 Aligned_cols=370 Identities=18% Similarity=0.167 Sum_probs=282.6
Q ss_pred hhhchhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 6 NVFGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
+...+..++.+....|..+...++-..+.|-+.+|+|+|..+.|+.+++|.+++.+ .|+...+.||+ .||+.++
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-----~Rr~lLl 82 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-----ERRRLLL 82 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----chHHHHH
Confidence 44567777778888888888776556666777999999999999999999999988 79999999995 6888999
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
....+++++.+++++++ +++.+.+.|++.++..+...+...++..++. |+++|++++++...+.+++.++|..
T Consensus 83 ~~l~lFi~~n~l~alAp----~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv---pp~~~~~Aiaiv~~G~tlA~v~GvP 155 (394)
T COG2814 83 GLLALFIVSNLLSALAP----SFAVLLLARALAGLAHGVFWSIAAALAARLV---PPGKRGRALALVFTGLTLATVLGVP 155 (394)
T ss_pred HHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CccchhhHHHHHHHHHHHHHHHhcc
Confidence 99999999999999997 6889999999999999999999999999999 5699999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhh
Q 011112 165 LGGYALTNIEIDRIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKR 243 (493)
Q Consensus 165 i~g~l~~~~gw~~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (493)
+|.++.+.+|||+.|++.++++++..+. +..+| +++..+. +
T Consensus 156 LGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~~~~----------------------------~--------- 197 (394)
T COG2814 156 LGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-PSEISGS----------------------------L--------- 197 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCC----------------------------C---------
Confidence 9999999999999999999888777654 45678 1111100 0
Q ss_pred hhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCC
Q 011112 244 KKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILN 323 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g 323 (493)
+ . +. ++..+.+|+|+++...+..++........++...+++++..|
T Consensus 198 -~-------~----------------------~~----~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g 243 (394)
T COG2814 198 -P-------G----------------------PL----RTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAG 243 (394)
T ss_pred -C-------c----------------------ch----hHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccC
Confidence 0 0 11 234567899999887766666454444455555667788899
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHH
Q 011112 324 LEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 324 ~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
+|.+..++.....+++.++|+.++||+.|| +.|+.+.....++.+..+. +.... .+.+..+....+
T Consensus 244 ~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~-l~~~~--------~~~~~~~~~~~~---- 309 (394)
T COG2814 244 FSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA-LTFTG--------ASPALALALLFL---- 309 (394)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH-HHHhc--------chHHHHHHHHHH----
Confidence 999999999999999999999999999999 8888887776666654332 11111 111111111111
Q ss_pred HHhhHhHH-HHHHhhcCC--CCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhh
Q 011112 404 NQFKFMPF-LILSGQLCP--PGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAF 480 (493)
Q Consensus 404 ~~~~~~~~-~~~~~~~~p--~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (493)
-++...|. +.+..+..+ |+.+..+.+++.+..|+|...|..+||.+.|++|+.. .....++..+++.+.
T Consensus 310 wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~--------~~~~~a~l~~~a~~~ 381 (394)
T COG2814 310 WGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAA--------TGWVGAALLLLALLL 381 (394)
T ss_pred HHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHHHHHH
Confidence 22233332 344444444 7889999999999999999999999999999987643 234455555555555
Q ss_pred h
Q 011112 481 L 481 (493)
Q Consensus 481 ~ 481 (493)
.
T Consensus 382 ~ 382 (394)
T COG2814 382 A 382 (394)
T ss_pred H
Confidence 4
No 4
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.98 E-value=2.3e-29 Score=265.21 Aligned_cols=393 Identities=14% Similarity=0.122 Sum_probs=270.7
Q ss_pred hhhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccC-CCCchhHH
Q 011112 6 NVFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIK-GRKRIPYL 83 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~-g~~rr~~i 83 (493)
+.+++++.+.+...+|.+|+.. +....++.+++ +.|.|.+++|.+ +....++..+|+||+++||+... ..|||+++
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~-~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~l 84 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFF-SLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWL 84 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHcccccCCCCchHHH
Confidence 4467777787889999999975 66666666655 579999999985 66777887899999999996332 23566788
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS 163 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~ 163 (493)
+.+.+..+++...+++.+. ..+.+.+.+.+++.+++.+.++++.++++.|..+ +++|+++.++...+..+|.++++
T Consensus 85 l~~~i~~~~~~~~~a~~~~-~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~---~~~rg~~~~i~~~g~~lG~llg~ 160 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLEP-GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLP---AEERGAGAAISVLGYRLAMLVSG 160 (491)
T ss_pred HHHHHHHHHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---hhhhHHHHHHHHHHHHHHHHHHH
Confidence 8888888888777766532 2356677788889999999999999999999984 58899999999999999999999
Q ss_pred HHHHHhhc-cccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhh
Q 011112 164 LLGGYALT-NIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKK 242 (493)
Q Consensus 164 ~i~g~l~~-~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (493)
.+++++.+ ..|||.+|++.+++.++..+..+++||+++..+. + ++ .
T Consensus 161 ~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~--------~-------------------~~------~ 207 (491)
T PRK11010 161 GLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPV--------P-------------------KT------L 207 (491)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc--------c-------------------cc------h
Confidence 99999998 5799999999887766665555557775432100 0 00 0
Q ss_pred hhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccC
Q 011112 243 RKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEIL 322 (493)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 322 (493)
+ . +.. .++.+.+++|+.+...+..++............++|+.+..
T Consensus 208 --~-------~----------------------~~~---~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~ 253 (491)
T PRK11010 208 --E-------Q----------------------AVV---APLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGV 253 (491)
T ss_pred --h-------h----------------------hHH---HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 0 001 12333455666655443333322221111222344555568
Q ss_pred CCCHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHH
Q 011112 323 NLEASFLGTAR-VVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVD 401 (493)
Q Consensus 323 g~s~~~~gl~~-~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 401 (493)
|+|..+.|... ..+.++.+++.++++++.||+++|+.+..+.++..+..+....+... .++.........+..
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~------~~~~~~l~~~~~l~~ 327 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT------DKNLYSMGAAVFFEN 327 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc------cccHHHHHHHHHHHH
Confidence 99999999985 57778999999999999999999888777666555433221111110 011111111122333
Q ss_pred HHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh
Q 011112 402 AVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (493)
.+.++...+..++.++.++++.+++.+|+.++..++|+.+++.+.|.+.|.+|+ ...+.+.+++++++.+..
T Consensus 328 ~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~--------~~~f~~~~~~~l~~l~~~ 399 (491)
T PRK11010 328 LCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGW--------PTFYLFSVAAAVPGLLLL 399 (491)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh--------HHHHHHHHHHHHHHHHHH
Confidence 344445555678889999999999999999999999999888899999998764 223445555555555554
Q ss_pred hccc
Q 011112 482 FLIP 485 (493)
Q Consensus 482 ~~l~ 485 (493)
.+++
T Consensus 400 ~~~~ 403 (491)
T PRK11010 400 LVCR 403 (491)
T ss_pred HHHH
Confidence 4444
No 5
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=9.1e-29 Score=254.55 Aligned_cols=383 Identities=15% Similarity=0.135 Sum_probs=260.8
Q ss_pred HHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCC-CCchhHHHHHHHHHHHH
Q 011112 16 ICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKG-RKRIPYLVISTVLSLVP 93 (493)
Q Consensus 16 ~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g-~~rr~~ii~~~~l~~~~ 93 (493)
+...|+.||+.. +....+|.++++ .|+|.+++|++ +....++.++|+||+++||++..+ .|||++++.+.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~-~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFF-SLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHH-HHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 457899999985 888889999886 69999999986 556667888999999999985432 25667899998888888
Q ss_pred HHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 011112 94 WLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN- 172 (493)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~- 172 (493)
...+++.+.. .+.+.+.+..++.+++.+.++++.++++.|..+ +++|+++.++...+..+|.++++.+++.+.+.
T Consensus 82 ~~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~---~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~ 157 (402)
T PRK11902 82 IAAMAFCPPH-AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLH---PEERGAGAAVKVLGYRLAMLVSGGLALWLADRV 157 (402)
T ss_pred HHHHHhcCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 8877776432 245566666667788899999999999999984 58899999999999999999999999999885
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhh
Q 011112 173 IEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKK 252 (493)
Q Consensus 173 ~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (493)
.|||..|++.+++.++..+..++.||++++++. + ++ .+
T Consensus 158 ~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~--------~-------------------~~--------~~------- 195 (402)
T PRK11902 158 LGWGNTYLLMAGLMLAGALTTLWAPEPEVPARP--------P-------------------RS--------LG------- 195 (402)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc--------c-------------------ch--------hH-------
Confidence 599999999887765554444566765433210 0 00 00
Q ss_pred hhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHH
Q 011112 253 RMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTA 332 (493)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~ 332 (493)
. +.+ +++.+.+|||.++..++..++............+++..++.|++++++|++
T Consensus 196 ~----------------------~~~---~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~ 250 (402)
T PRK11902 196 E----------------------AVV---GPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIV 250 (402)
T ss_pred H----------------------HHH---HHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 0 111 133456788887665544333222111111112334556689999999998
Q ss_pred H-HHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHH
Q 011112 333 R-VVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPF 411 (493)
Q Consensus 333 ~-~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~ 411 (493)
. ..+.++.+++.++.+++.||+++|+.+..+.++..+..+........ .++.+.......+..++.++...+.
T Consensus 251 ~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~ 324 (402)
T PRK11902 251 NKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT------PKHLWTMALAIGIENLCGGMGTAAF 324 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc------CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 44556788999999999999999988877666555443222111110 0111211111222333444555555
Q ss_pred HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhccc
Q 011112 412 LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIP 485 (493)
Q Consensus 412 ~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (493)
.+..+.+++++..++.++++++..++++..++.++|.+.|.+|+. ..+.+.+++++++.+.++..+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~--------~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 325 VALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWP--------GFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--------HHHHHHHHHHHHHHHHHHHHh
Confidence 666777777777788889988888899887788999999998753 344555566666655554444
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=6.4e-28 Score=247.20 Aligned_cols=354 Identities=16% Similarity=0.105 Sum_probs=239.9
Q ss_pred hhhchhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 6 NVFGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
|..+|...+.+.+..+..........++.|.+++++|.|+++.|+..+.+.+++.+ ++++|+++||+ +||+.+.
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~ 78 (390)
T PRK03545 4 RKVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-----ERRKLLI 78 (390)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----ChHHHHH
Confidence 33455545544444444332222233334556888999999999999999988876 78899999995 6788888
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
.+.++.+++.+.+++.+ +++.+++.|+++|++.+...+..++++.|..+ +++|++++|+...+.++|..+|+.
T Consensus 79 ~~~~~~~~~~~~~~~~~----~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~---~~~r~~~~g~~~~~~~~g~~ig~~ 151 (390)
T PRK03545 79 GLFVLFIASHVLSALAW----NFTVLLISRIGIAFAHAIFWSITASLAIRVAP---AGKKAQALSLLATGTALAMVLGLP 151 (390)
T ss_pred HHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---hhhhhhHHHHHHHHHHHHHHHHhh
Confidence 89888888888888765 57788999999999998888888999999884 589999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhh
Q 011112 165 LGGYALTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKR 243 (493)
Q Consensus 165 i~g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (493)
+++.+.+++|||++|++.+++.++..+.. .++||++++++
T Consensus 152 l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~--------------------------------------- 192 (390)
T PRK03545 152 LGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS--------------------------------------- 192 (390)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---------------------------------------
Confidence 99999999999999999887766655433 33454322110
Q ss_pred hhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCC
Q 011112 244 KKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILN 323 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g 323 (493)
. +.+ +..+.+|+|.++......++............+++..+..|
T Consensus 193 ---------~----------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 237 (390)
T PRK03545 193 ---------G----------------------SLK----SLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAG 237 (390)
T ss_pred ---------c----------------------hHH----HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 011 12345667766543332222111111112223445556689
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHH
Q 011112 324 LEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 324 ~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
+|..+.+.......++.+++.++.+++.||+++|+.. .+..+..++........ ++.+.......+....
T Consensus 238 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 238 LSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA---------NSEWHLSVLSIFWGIA 307 (390)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh---------chHHHHHHHHHHHHHH
Confidence 9999999887778889999999999999999876543 44333333221111110 1111111111122222
Q ss_pred HHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 404 NQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 404 ~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
.........+.+.+..| +.+++++|+++...++|..+|+.++|.+.|.+|+.
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~ 359 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLS 359 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh
Confidence 11112223456667666 58899999999999999999999999999988764
No 7
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=3.1e-26 Score=234.69 Aligned_cols=363 Identities=18% Similarity=0.168 Sum_probs=236.8
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCC-CCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKG-RKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g-~~rr~~ii~~~~l~ 90 (493)
.+.+...|+.||+. ++....++.+++ +.|.|.+++|.+ ++..+++..+++|+++.||+...+ .|||.|++....+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~-~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFL-PLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHH-HHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 45577889999998 577777777766 579999999975 666778888888888888864443 35666655555444
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
.++...++..........++....++.++..+.+|+..|++..|..+ .++++...+....+..+|.++|+.+.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~---~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~ 157 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFN---GRTLAKGNAVQIAGVMIGFFGGGAGTLVLF 157 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333333221111122233445556778889999999999888663 467777788888888899999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhh
Q 011112 171 TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQ 250 (493)
Q Consensus 171 ~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
++.|||..|++.+++.++..+..++.+|++++++ + + + +
T Consensus 158 ~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~---------~-~-----------------~----------~----- 195 (390)
T TIGR02718 158 GKFGQRPAFLLVACVPLASLVCVLWLKDRAVASP---------E-A-----------------P----------L----- 195 (390)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcc---------c-c-----------------c----------h-----
Confidence 9999999999998777665555555544322110 0 0 0 0
Q ss_pred hhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 251 KKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
. ..+++++.+|+|.++......++............+.|..| .|+|+++.|
T Consensus 196 -------------------------~---~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig 246 (390)
T TIGR02718 196 -------------------------A---RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIG 246 (390)
T ss_pred -------------------------h---hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHH
Confidence 0 01134556788887665544444333222222233455555 799999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHh
Q 011112 331 TARVVG-WVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFM 409 (493)
Q Consensus 331 l~~~~~-~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 409 (493)
...... ....+++..+.+++.||+++|+.+..+.++..+..+........+. .+..........+..+..+..+.
T Consensus 247 ~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~ 322 (390)
T TIGR02718 247 RLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWL----APGIAVAWSCSAFGSLITGITSV 322 (390)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc----CCcHHHHHHHHHHHHHHHHHHHH
Confidence 986554 4577778889999999999999988776655333222111111000 01111111111122223344444
Q ss_pred HHHHHHhhcCCC-CchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 410 PFLILSGQLCPP-GIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 410 ~~~~~~~~~~p~-~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
+.++.+++.+++ +.+|+.+++.++..++|..++|.++|.+.|..|+
T Consensus 323 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~ 369 (390)
T TIGR02718 323 AIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGY 369 (390)
T ss_pred HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 556666777776 8999999999999999999999999999998764
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=4.4e-27 Score=244.50 Aligned_cols=375 Identities=13% Similarity=0.073 Sum_probs=238.5
Q ss_pred hhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 10 VSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 10 ~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
++..+...+.++...++. .....++.+ .+++|.|.++.|+..+.+.+++.+ +++.|+++||+ +||+.+..+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----g~r~~~~~~~ 95 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-----NARYFMGIGL 95 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-----CCchhHHHHH
Confidence 344444555566666654 444444444 667999999999999999999887 79999999995 5777888888
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011112 88 VLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g 167 (493)
++..++.+++++.+ +++.+.+.|++.+++.+...+..++++.|..+ +++|++++++.+....+|..+++.+++
T Consensus 96 ~~~~~~~~~~~~~~----~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~---~~~rg~~~~~~~~~~~~g~~~~~~~~~ 168 (434)
T PRK11663 96 IATGIINILFGFSS----SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYS---RTERGGWWAIWNTAHNVGGALIPLVVG 168 (434)
T ss_pred HHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHccchHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888777664 56777888999998888887888899888874 588999999999999999999999999
Q ss_pred HhhccccHHHHHHHHHHHHHHHHH-HhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhh
Q 011112 168 YALTNIEIDRIFLLFTVLPAIQLL-SCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKN 246 (493)
Q Consensus 168 ~l~~~~gw~~~f~~~~~~~~l~~i-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (493)
++.+++|||+.|++.+++.++..+ ..+++||++++.+.+.+ ...++ +.++ .++ + .+++.
T Consensus 169 ~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~-----~~~~--~~~-----~-------~~~~~ 228 (434)
T PRK11663 169 AIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSV-GEWRH-----DALE--LAQ-----Q-------QEGAG 228 (434)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCc-ccccc-----cccc--cch-----h-------ccccC
Confidence 999999999999988876655543 33456776533210000 00000 0000 000 0 00000
Q ss_pred hhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCH
Q 011112 247 KKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEA 326 (493)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~ 326 (493)
. +.++.++ ...+++|+++...+..++.+..........+.|+.++.|+|.
T Consensus 229 ------~----------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 278 (434)
T PRK11663 229 ------L----------------------SRKEILT--KYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDL 278 (434)
T ss_pred ------C----------------------ChhhhHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCH
Confidence 0 1122111 124577777765443333232222222334556666689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChhHHHH-HHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHH
Q 011112 327 SFLGTARVVGWVGLMLGTYTYNGYLKRL--KLRRILL-LTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 327 ~~~gl~~~~~~~~~~l~~~~~~~~~~~~--~~r~~l~-~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
.+.+.......++.+++.++.+++.||+ +.|+... ...+...+. ...+..... ..............+.
T Consensus 279 ~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~g~~ 350 (434)
T PRK11663 279 VTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS-VGSLWLMPF-------ASYVMQAACFFTIGFF 350 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH-HHHHHHccc-------ccHHHHHHHHHHHHHH
Confidence 9988887777888999999999999997 3333322 111111111 111111110 1111110011111111
Q ss_pred HHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 404 NQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 404 ~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.............|..|++.+|+..|+.++..++|..++|.+.|.+.|++|+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~ 402 (434)
T PRK11663 351 VFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHW 402 (434)
T ss_pred HhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhccc
Confidence 1000111234567889999999999999999999999999999999998764
No 9
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=1.5e-26 Score=237.05 Aligned_cols=379 Identities=12% Similarity=0.073 Sum_probs=248.6
Q ss_pred hhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
..+|+....+.+.++.++++. ..... .+.+++++|.|.++.|+..+++.++..+ +|++|+++||+ +||+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-----g~r~~~~ 81 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALV-LAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-----GRRLPMV 81 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHH
Confidence 366777777778888888875 44444 4556888999999999999999988887 89999999995 5777888
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
.+.++..++.+.+++.+ +++.+++.|++.|++.+...+...+++.|..+ +++|+++.++......+|.++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~----~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~ 154 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAP----GYITMFIARLVIGIGMGGEYGSSAAYVIESWP---KHLRNKASGLLISGYAVGAVVAAQ 154 (405)
T ss_pred HHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCC---hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 88888888887777764 56778899999999999999999999999884 489999999999999999999999
Q ss_pred HHHHhhcccc--HHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhh
Q 011112 165 LGGYALTNIE--IDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKK 242 (493)
Q Consensus 165 i~g~l~~~~g--w~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (493)
+++.+.++.+ ||+.|++.++..++..+.....||+++.++.+++... .++. .++.. .
T Consensus 155 l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~-----------~ 213 (405)
T TIGR00891 155 VYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKAL--VRTM--------VDILY-----------G 213 (405)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhh--hhhH--------HHHHh-----------c
Confidence 9999988766 9999988665544443444456776543311100000 0000 00000 0
Q ss_pred hhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccc--hHHHHHHHHHHHhcccCCCcceeeeeec
Q 011112 243 RKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPE--ILRPMAWFFLAHVAVPNLSTVMFYYQTE 320 (493)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (493)
..+ . .....++.....++..+++. +.......+.............+.|..+
T Consensus 214 ~~~-------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (405)
T TIGR00891 214 GEH-------R-------------------IANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKA 267 (405)
T ss_pred cch-------h-------------------hhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 000 0 00000100011111111111 1111111111111112222334556666
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHH
Q 011112 321 ILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALV 400 (493)
Q Consensus 321 ~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~ 400 (493)
+.|+|..+.+.+.....++.+++.++.+++.||+++|+.+..+.++..+..... .... +..........+.
T Consensus 268 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~ 338 (405)
T TIGR00891 268 DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPV-FAIG--------ANVAVLGLGLFFQ 338 (405)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHH-HHhC--------CchHHHHHHHHHH
Confidence 689999999998888888999999999999999999998887766543322111 1110 1111111111222
Q ss_pred HHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 401 DAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
..+..........++.|..|++.+|+.+|+.+.+.++|..++|.++|.+.|..|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 339 QMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222222223345678899999999999999999999999999999999999876
No 10
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=9.6e-27 Score=241.06 Aligned_cols=367 Identities=14% Similarity=0.131 Sum_probs=244.7
Q ss_pred hchhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
++++......+.++.++++.....+..+.+++++|.|+.+.++..+++.+++.+ +|++|+++||+ +||+.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-----g~r~~l~~~ 89 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-----GRKPLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CChHHHHHH
Confidence 566666666777788888764345555677889999999999999999999887 79999999995 678888899
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
.++..++.+.+++.+ +++.+++.|++.|++.+...+...+++.|..+ +++|+++.++...+..+|.++++.++
T Consensus 90 ~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~lg~~~~~~l~ 162 (426)
T PRK12307 90 IVAYSVGTGLSGLAS----GVIMLTLSRFIVGMGMAGEYACASTYAVESWP---KHLKSKASAFLVSGFGIGNIIAAYFM 162 (426)
T ss_pred HHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCC---HhHhhHhhhHHHHHHhHHHHHHHHHH
Confidence 998888888777764 57788999999999999888889999999884 58899999999999999999999999
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhh
Q 011112 167 GYALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKN 246 (493)
Q Consensus 167 g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (493)
+.+.++.+||+.|++..+..++........||+++..+.+.+ ++ +. ++ +.
T Consensus 163 ~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~-----~~------------~~----~~--------~~- 212 (426)
T PRK12307 163 PSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS-----GK------------GK----HS--------QS- 212 (426)
T ss_pred HHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh-----cc------------cc----cc--------cc-
Confidence 999999999999987543322211111123444322110000 00 00 00 00
Q ss_pred hhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHH---HHhcccCCCcceeeeeeccCC
Q 011112 247 KKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFL---AHVAVPNLSTVMFYYQTEILN 323 (493)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~g 323 (493)
..++.....++.+|+|.++........ ............+.|..+ .|
T Consensus 213 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 262 (426)
T PRK12307 213 -----------------------------AWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EG 262 (426)
T ss_pred -----------------------------chhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 000000123345566665432221111 111111112223445544 68
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHH
Q 011112 324 LEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 324 ~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
+++.+.+.......++.+++.++.+++.||+++|+.+..+.++..+..+.. .... ......+....+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~ 333 (426)
T PRK12307 263 FDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPL-FRIP--------QDNYLLLGACLFGLMA 333 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHHc--------cccHHHHHHHHHHHHH
Confidence 999888888777888899999999999999999998887766554432211 1111 1111111111111111
Q ss_pred HHhh-HhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 404 NQFK-FMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 404 ~~~~-~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.... ......++.|..|++.+|+++|+.+...++++.++|.++|.+.+.+|+
T Consensus 334 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~ 386 (426)
T PRK12307 334 TNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGL 386 (426)
T ss_pred hcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccH
Confidence 1111 112245678999999999999999999999999999999999998764
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1e-27 Score=235.52 Aligned_cols=375 Identities=14% Similarity=0.079 Sum_probs=269.0
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
.+++.++.+.+.|....+.. -.+.+. |.+.++.|+|.+|+|.+.+++.+.|.+ |+++|.++|| .+.|..+-.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~-p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-----~npr~fm~~ 99 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAM-PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-----SNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcc-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-----CCCceeehH
Confidence 46777777778887777765 445554 455777899999999999999999998 8999999998 467778899
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+++++.+..+++++.+ +.+.+.++.++.|...+...++....+....+ .+|||+..++++++.++|+.+.+++
T Consensus 100 gLilsai~nil~Gfs~----s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfs---r~eRG~~~siWn~shNiGGal~~~~ 172 (448)
T COG2271 100 GLILSAIVNILFGFSP----SLFLFAVLWVLNGWFQGMGWPPCARTITHWFS---RKERGTWWSIWNTSHNIGGALAPLV 172 (448)
T ss_pred HHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcC---ccccCceEEEehhhhhcccchHHHH
Confidence 9999999999999886 67788889999999989998898888888774 5999999999999999999999999
Q ss_pred H--HHhhccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhh
Q 011112 166 G--GYALTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKK 242 (493)
Q Consensus 166 ~--g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (493)
. +++.++.+||..|+..+++.++..+.. +..+++|+...-+.-.++.+|.. +++. |+
T Consensus 173 ~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~---------e~~~----~~------- 232 (448)
T COG2271 173 ALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPL---------EIYE----EE------- 232 (448)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCch---------hhhh----hh-------
Confidence 9 999999999999999999888887654 45677765543111000000000 0000 00
Q ss_pred hhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccC
Q 011112 243 RKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEIL 322 (493)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 322 (493)
++. + +. +.++.+ ..-+++||.+|.+.+..++.+..-.+.+...+.|+.+..
T Consensus 233 -~~~------~--------~l------------s~~~i~--~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k 283 (448)
T COG2271 233 -KEN------E--------GL------------TAWQIF--VKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVK 283 (448)
T ss_pred -ccC------C--------Cc------------cHHHHH--HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc
Confidence 000 0 00 223322 234689999998775544445555556666688888899
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHhhhhhhheeccccccCccCc--eEeeehhH
Q 011112 323 NLEASFLGTARVVGWVGLMLGTYTYNGYLKRL--KLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDK--TMVLYGSA 398 (493)
Q Consensus 323 g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~--~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~--~~~l~~~~ 398 (493)
|+|..++.......-++.+.|+++.|+++||. |+|...-+...+....+++..+.. ++. ++. ..
T Consensus 284 ~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~---------~~~~~~l~---~~ 351 (448)
T COG2271 284 GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA---------PNGSYLLD---AI 351 (448)
T ss_pred CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC---------CCccHHHH---HH
Confidence 99999999888888889999999999999986 444443333333222222222211 222 211 11
Q ss_pred HHHHHHHhhHhHHH---HHHhhcCCCCchHHHHHHHHHHHhh-hhhhhHhHHHHhHHhhcCC
Q 011112 399 LVDAVNQFKFMPFL---ILSGQLCPPGIEGTLFALFMSISNF-GSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 399 ~~~~~~~~~~~~~~---~~~~~~~p~~~~gt~~gl~~~~~~l-g~~~~~~i~g~l~~~~g~~ 456 (493)
....++-+.+.|.+ ....|..|++..||+.|+...++++ |.+.+...-|.+.|.+|+.
T Consensus 352 ~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~ 413 (448)
T COG2271 352 LLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWD 413 (448)
T ss_pred HHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCc
Confidence 22233334455653 3488999999999999999999999 8888999888888876653
No 12
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.96 E-value=1.6e-26 Score=244.16 Aligned_cols=390 Identities=14% Similarity=0.025 Sum_probs=260.5
Q ss_pred hhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 10 VSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 10 ~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
|..++.+++.+|+..++. +++.++|.+ .+++|.+.++.+|..+.+.+++.. .|++|+++||+ +||+.++.+.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-----Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-----GFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHH
Confidence 344556677788888885 888887766 667999999999999999999876 89999999995 6888999999
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011112 88 VLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g 167 (493)
+++.++.+.++..+ +.+.+++.|+++|+|.+...+...+.+.+... |+++|++++|+......+|..+||.++|
T Consensus 79 ~~~~~~~~~~~~a~----~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~--~~~~r~~~~g~~~~~~~~g~~~gp~lgg 152 (495)
T PRK14995 79 TLFGLASLAAAFSP----TASWLIATRALLAIGAAMIVPATLAGIRATFT--EEKQRNMALGVWAAVGSGGAAFGPLVGG 152 (495)
T ss_pred HHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888875 57788999999999998887777777766553 3589999999999999999999999999
Q ss_pred HhhccccHHHHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhh
Q 011112 168 YALTNIEIDRIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKN 246 (493)
Q Consensus 168 ~l~~~~gw~~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (493)
++.++.||||+|++...+.++..+. .+++||++++..++.| ..+... . ......
T Consensus 153 ~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d-------------------~~g~~~---~-~~~~~~-- 207 (495)
T PRK14995 153 ILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLN-------------------LGHALM---L-IVAILL-- 207 (495)
T ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC-------------------hHhHHH---H-HHHHHH--
Confidence 9999999999999987666555443 3456765422210000 000000 0 000000
Q ss_pred hhhhhhhhhhhhhccCCCCCCc------h------hHHH-HhhHH--HHHHHHHHhhcccchHHHHHHHHHHHhcccCCC
Q 011112 247 KKNQKKRMFKIRKSQIPEKNNP------L------VIQW-FHSLK--AAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLS 311 (493)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~------~------~~~~-~~~~~--~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 311 (493)
....+++. ....+.+ . ...+ .++.+ +.+.+ .+.+|+|.+....+..++.........
T Consensus 208 ------l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~ 279 (495)
T PRK14995 208 ------LVYSAKTA-LKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFE 279 (495)
T ss_pred ------HHHHHHhc-cccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHH
Confidence 00000000 0000000 0 0001 00000 00001 356788877655544443333222222
Q ss_pred cceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCce
Q 011112 312 TVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKT 391 (493)
Q Consensus 312 ~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~ 391 (493)
...+.|+++..|+|+.+.|+...+..++..+++++.+++.||+++|+.+..+.++..++... +..... .+..+
T Consensus 280 ~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~-l~~~~~------~~~~~ 352 (495)
T PRK14995 280 LLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYG-LAMTDF------STQQW 352 (495)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH-HHHhcC------CCchH
Confidence 23355667778999999999988899999999999999999999988887777666554322 111110 01111
Q ss_pred EeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 392 MVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 392 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
.......+..+..+....+....+.+..|+++++++.+++++..++|..+|+.+.|.+.+
T Consensus 353 ~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 353 QAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111112233333344455566778888999999999999999999999999999998865
No 13
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=3e-26 Score=238.10 Aligned_cols=384 Identities=14% Similarity=0.153 Sum_probs=255.6
Q ss_pred HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch-
Q 011112 27 SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR- 104 (493)
Q Consensus 27 ~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~- 104 (493)
++....+++++++++|+|+.++|.+.++..+..++ +|+.|+++||++.|+.|||++++.+.+...++..++...++..
T Consensus 16 ~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~ 95 (437)
T TIGR00792 16 AIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSA 95 (437)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCc
Confidence 35666678888999999999999999999888877 8999999999987766889999999888888877777665321
Q ss_pred -hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh-------ccccHH
Q 011112 105 -SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL-------TNIEID 176 (493)
Q Consensus 105 -~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~-------~~~gw~ 176 (493)
.....+++.+++.+++.+...++..++..|.++ +++||++..++......+|..+++.+.+.+. +..+||
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~--~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~ 173 (437)
T TIGR00792 96 TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITL--DPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWF 173 (437)
T ss_pred chHHHHHHHHHHHHHHHHHhhcccHhhCcccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHH
Confidence 124455667777788888888899999999875 4689999999999999999888777766554 246899
Q ss_pred HHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhh
Q 011112 177 RIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMF 255 (493)
Q Consensus 177 ~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
+++.+.+++.++..+.+ ++.||++++.+. ++ + + + .
T Consensus 174 ~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~--------~~------------~-----~----------~-------~-- 209 (437)
T TIGR00792 174 MFALVLALIGVVSLIICFFGTKERYSEIPK--------NI------------E-----K----------K-------L-- 209 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEecCCCCCc--------cc------------c-----c----------C-------C--
Confidence 99998887776665443 456765422100 00 0 0 0 0
Q ss_pred hhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHH
Q 011112 256 KIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVV 335 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~ 335 (493)
+.++ .+++.++||.++...+..++............++|.+..+| ++...+.....
T Consensus 210 --------------------~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 265 (437)
T TIGR00792 210 --------------------SLKQ---IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSI 265 (437)
T ss_pred --------------------CHHH---HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHH
Confidence 1222 23345678877665544444333332222334556555566 45566766666
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILS 415 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 415 (493)
..++.+++.++.+++.||+++|+.+..+.++..++.+. ..... .+.+.+.....+..+..+.......+++
T Consensus 266 ~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 336 (437)
T TIGR00792 266 AIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLI-FFFAG--------SNLPLILVLIILAGFGQNFVTGLVWALV 336 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH-HHHcc--------hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999988887766654322 21111 1111111111222222222333345566
Q ss_pred hhcCC-------CCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCcc------chHHHHHH-HHhhhhhhhhhh
Q 011112 416 GQLCP-------PGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFD------NLLLGISI-QALCTFIPIAFL 481 (493)
Q Consensus 416 ~~~~p-------~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~------~~~~~~~~-~~~~~~~~~~~~ 481 (493)
++.+| ++.+|+++|++++..++|..+++.+.|.+.+..|+....-+ ++...+.. ..++.+++.++.
T Consensus 337 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~~~~ 416 (437)
T TIGR00792 337 ADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALFLLLAAIII 416 (437)
T ss_pred hhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654 66789999999999999999999999999998887532111 22333333 445556666655
Q ss_pred h-cccCCCC
Q 011112 482 F-LIPKGAT 489 (493)
Q Consensus 482 ~-~l~~~~~ 489 (493)
. ..|.++|
T Consensus 417 ~~~y~l~~~ 425 (437)
T TIGR00792 417 GRFYKLTEK 425 (437)
T ss_pred HHHeeCcHH
Confidence 4 6665544
No 14
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=2.4e-26 Score=233.51 Aligned_cols=368 Identities=14% Similarity=0.068 Sum_probs=236.6
Q ss_pred HHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHH
Q 011112 17 CLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPW 94 (493)
Q Consensus 17 ~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~ 94 (493)
.+.+|+.++. ++....+++++++++|.|++++|+..+.+.+...+ +|++|.++||+ .|||.+++.+.....++.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~----g~r~~~~~~~~~~~~~~~ 78 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ----GDRKGLILFCCLLAALAC 78 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCchHHHHHHHHHHHHHH
Confidence 3457777776 46667777788888999999999999988776554 89999999996 245555555666655565
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhH--HHHHHHHHHHHHHHHHHHHHHhhcc
Q 011112 95 LILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDL--QSLSWLAMAFGGICGSLLGGYALTN 172 (493)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~--~g~~~~~~~~G~~lg~~i~g~l~~~ 172 (493)
..++..+ +++.+++.|++.+.+.+...+..+++..|..++ ++|++. .+......++|.++|+.+++++.++
T Consensus 79 ~~~~~~~----~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 151 (375)
T TIGR00899 79 LLFAWNR----NYFLLLVLGVLLSSFASTANPQLFALAREHADR---TGREAVMFSSVMRAQISLAWVIGPPLAFWLALG 151 (375)
T ss_pred HHHHhcc----hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhh---cchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh
Confidence 6666654 466677788887776666777778888887642 444433 5777888899999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhh
Q 011112 173 IEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQK 251 (493)
Q Consensus 173 ~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (493)
.+||+.|++.+++.++..+.. +++||+++++++ ++ + +
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-----------------~----------~------ 189 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPG---------AL-----------------T----------R------ 189 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCccc---------cc-----------------C----------c------
Confidence 999999999887766655443 457775533210 00 0 0
Q ss_pred hhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHH
Q 011112 252 KRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGT 331 (493)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl 331 (493)
. +.+ +.+++|+.+......++............+.|..+++|.++.+.|.
T Consensus 190 -~----------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 239 (375)
T TIGR00899 190 -L----------------------EVR-------GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGL 239 (375)
T ss_pred -c----------------------hhh-------hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHH
Confidence 0 001 1223444332222212211111111122345556668999998988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHH
Q 011112 332 ARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPF 411 (493)
Q Consensus 332 ~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~ 411 (493)
.........+++.++.+++.||+++|+.+..+.++..+... ..... ++.+.......+.....+......
T Consensus 240 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 240 MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYT-GLAAD---------NSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHH-HHHHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666667777888899999999999988776554433211 11110 111111111122222223333334
Q ss_pred HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccC
Q 011112 412 LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPK 486 (493)
Q Consensus 412 ~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 486 (493)
+.+..|..|+ ++++++++++...++|..+++.++|.+.+.+|+. ..+.+.+++.+++.+...+++|
T Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 310 MLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYH--------AVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccch--------hHHHHHHHHHHHHHHHHheecC
Confidence 5667777775 5679999999999999999999999999976643 2445556666666666655554
No 15
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=2.8e-26 Score=231.29 Aligned_cols=355 Identities=16% Similarity=0.143 Sum_probs=243.4
Q ss_pred HHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHH
Q 011112 17 CLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPW 94 (493)
Q Consensus 17 ~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~ 94 (493)
....++..+.. +....++.+ .++++.++.++|+..++..++..+ +|++|+++||+ +||+.++.+.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-----g~r~~~~~~~~~~~~~~ 78 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLY-VLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-----DRKKVMIGADLIRAVLV 78 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-----chhHHHHHHHHHHHHHH
Confidence 34556666543 555555555 456899999999999999998877 89999999995 57777777777766666
Q ss_pred HHHhhcccc-hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011112 95 LILGLNAFF-RSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI 173 (493)
Q Consensus 95 ~~~~~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~ 173 (493)
..+...+.. +.+++.+++.|++.+++.+...+..++++.|..+ +++|++++++......+|.++|+.+++.+.++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 79 AVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVP---EEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555544311 1256778899999999999999999999999985 479999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhhccc--cccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhh
Q 011112 174 EIDRIFLLFTVLPAIQLLSCGLVK--ENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQK 251 (493)
Q Consensus 174 gw~~~f~~~~~~~~l~~i~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (493)
+||+.|++.++..++..+..+..+ |++++++ + + . + . +
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~-----------~-----~-------~--~------ 194 (365)
T TIGR00900 156 GIKWAIWVDAVGFAISALLIVSVRIPELAASEI---------Q-A-----------L-----S-------N--A------ 194 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccCCCccc---------c-c-----------c-----c-------h--h------
Confidence 999999887765544443333332 2221110 0 0 0 0 0 0
Q ss_pred hhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCC-cceeeeeeccCCCCHHHHH
Q 011112 252 KRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLS-TVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~g~s~~~~g 330 (493)
..++..+..+..+|+|.++......++......... ...++|.++.+|.++.+.+
T Consensus 195 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (365)
T TIGR00900 195 ------------------------VLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYG 250 (365)
T ss_pred ------------------------HHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHH
Confidence 001111123345677777655443333222221122 2345566666899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhH
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMP 410 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~ 410 (493)
.......++.+++.++.+++.||.++|+.+..+..+..+..+. ..... ++.+.......+..+.......+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~ 321 (365)
T TIGR00900 251 WVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILV-VGLTP--------PNFPLFLVLWFAIGVGYGPINVP 321 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-HHhhc--------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888899999999999999999988887765554443221 11111 11111111122233333333444
Q ss_pred HHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 411 FLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 411 ~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
..+++.+..|++.|++.+|+.++..+++..+++.++|.+.|.+|
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56788999999999999999999999999999999999998764
No 16
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=6.3e-26 Score=238.26 Aligned_cols=392 Identities=18% Similarity=0.183 Sum_probs=255.8
Q ss_pred HHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHH
Q 011112 12 FLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVL 89 (493)
Q Consensus 12 ~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l 89 (493)
.++.+...++++.++. .....++.+ .+++|.|..+.++..+.+.++..+ .|++|+++||+ +||+.++.+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~r~~~~~~~~~ 84 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSM-AQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-----GVRNIFFTAIVL 84 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----chHHHHHHHHHH
Confidence 4566777888888764 556666555 567999999999998888888776 79999999995 567777788777
Q ss_pred HHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 90 SLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
..++.+.+.+.+ +.+.+++.|++++++.+...+...+++.|..+ +++|+++.|+.....++|..+|+.++|.+
T Consensus 85 ~~~~~~~~~~~~----~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 85 FTLGSLFCALSG----TLNELLLARVLQGVGGAMMVPVGRLTVMKIVP---REQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHhC----CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 777777766654 46678899999999999988888999999874 58899999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHHHHHHHHhh-ccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhh
Q 011112 170 LTNIEIDRIFLLFTVLPAIQLLSCG-LVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKK 248 (493)
Q Consensus 170 ~~~~gw~~~f~~~~~~~~l~~i~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
.++.+||+.|++......+..+... ..|+++... .+.| ..+.. ........
T Consensus 158 ~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~-~r~~-------------------~~~~~----~~~~~~~~---- 209 (471)
T PRK10504 158 VEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQT-RRFD-------------------LSGFL----LLAVGMAT---- 209 (471)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccC-CCCC-------------------hHHHH----HHHHHHHH----
Confidence 9999999999987765555444333 334332111 0000 00000 00000000
Q ss_pred hhhhhhhhhhhccCCCCCCc-----------hhH-HHHhhHHHHHHH--HHHhhcccchHHHHHHHHHHHhcccCCCcce
Q 011112 249 NQKKRMFKIRKSQIPEKNNP-----------LVI-QWFHSLKAAIYS--LYSAFRQPEILRPMAWFFLAHVAVPNLSTVM 314 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 314 (493)
......++. ...+.. ... .+....++..++ -.+++|||.+...+...++............
T Consensus 210 ----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 284 (471)
T PRK10504 210 ----LTLALDGSK-GLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMT 284 (471)
T ss_pred ----HHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 000000 000 000000000000 1246788887766555454343332222334
Q ss_pred eeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEee
Q 011112 315 FYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVL 394 (493)
Q Consensus 315 ~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l 394 (493)
++|.+...|.++.+.++......++.+++.++.+++.||+++|+.+..+.++..+..++... ... .++.+...
T Consensus 285 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~ 357 (471)
T PRK10504 285 PVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFML-VAL------LGWYYLLP 357 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHh-ccc------cccHHHHH
Confidence 56666668999999999888888888888889999999999999998887766665332211 110 01111111
Q ss_pred ehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 395 YGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
....+.....+..+.+.+.+..+..|++.+|+++++.++..++|..+|+.++|.+.+..|+.
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 11112223333344555677888999999999999999999999999999999999987763
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=5.5e-26 Score=233.87 Aligned_cols=357 Identities=18% Similarity=0.158 Sum_probs=239.2
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++|....+....+++++++. ......+ .+.+++|.|+++.|+..+...++..+ .+++|+++||+ +||+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-----GRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCchhHHH
Confidence 45555555556677788764 5555544 45778999999999999999998887 78999999995 57777888
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.++..++.+.+.+.+ +++.+++.|++.+++.+...+...+++.|..+ +++|++++++.+....+|..+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~~~~~ 158 (406)
T PRK11551 86 SVALFGLFSLATAQAW----DFPSLLVARLLTGVGLGGALPNLIALTSEAVG---PRLRGTAVSLMYCGVPFGGALASVI 158 (406)
T ss_pred HHHHHHHHHHHHHHhc----cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777777666654 56778899999999999988889999999884 4899999999999999999999999
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhh
Q 011112 166 GGYALTNIEIDRIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRK 244 (493)
Q Consensus 166 ~g~l~~~~gw~~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (493)
++.+.+..+||+.|++.+++.++..+. .+++||++++.+.+. + + + +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~-~-----------~-----~---------- 205 (406)
T PRK11551 159 GVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAG------A-G-----------K-----Q---------- 205 (406)
T ss_pred HHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccC------c-c-----------h-----h----------
Confidence 999989899999999877665555443 345787654331000 0 0 0 0
Q ss_pred hhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCC
Q 011112 245 KNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNL 324 (493)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~ 324 (493)
+ . +..+ ..++..++++.+......++............+.|..+ .|+
T Consensus 206 ~-------~----------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~ 252 (406)
T PRK11551 206 R-------A----------------------PVLR---ALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGL 252 (406)
T ss_pred h-------h----------------------hhHH---HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCC
Confidence 0 0 0000 00000011111111111111111111111122444444 699
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHH
Q 011112 325 EASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVN 404 (493)
Q Consensus 325 s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 404 (493)
++.+.+.......++.+++.++.+++.||.++|+.+..+.+...+..+. +... ++.+.......+.....
T Consensus 253 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~g~~~ 322 (406)
T PRK11551 253 SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA-LAAA---------PSFAGMLLAGFAAGLFV 322 (406)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHhc---------CcHHHHHHHHHHHHHHH
Confidence 9999999888888899999999999999999999887765544433211 1111 11111111111222222
Q ss_pred HhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhh
Q 011112 405 QFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSL 453 (493)
Q Consensus 405 ~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~ 453 (493)
.......+++..+..|++.|++.+|++++..++|..++|.++|.+.++.
T Consensus 323 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 323 VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 2222334677899999999999999999999999999999999998853
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=9.9e-26 Score=231.34 Aligned_cols=349 Identities=11% Similarity=0.059 Sum_probs=233.9
Q ss_pred chhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
+|+.+..+..+.+..........++.|.+.+++|+|+++.|+..+.+.+...+ +|++|+++||+ +||+.++.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-----grr~~~~~~~ 92 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-----DRRYVVILFA 92 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcHHHHHHHH
Confidence 34444444444444443332222333445778999999999999988888876 89999999995 6788888999
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011112 88 VLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g 167 (493)
++.+++.+.+.+.+ +++.+++.|+++|++.+...+..++++.|..+ +++|+++.++.....++|..+||.+++
T Consensus 93 ~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~~~~~~a~~~~~~~~~~g~~ig~~l~~ 165 (394)
T PRK10213 93 VLLTLSCLLVSFAN----SFSLLLIGRACLGLALGGFWAMSASLTMRLVP---PRTVPKALSVIFGAVSIALVIAAPLGS 165 (394)
T ss_pred HHHHHHHHHHHHHC----hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcC---HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888777764 57888999999999999998999999999884 589999999999999999999999999
Q ss_pred HhhccccHHHHHHHHHHHHHHHHHHhh-ccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhh
Q 011112 168 YALTNIEIDRIFLLFTVLPAIQLLSCG-LVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKN 246 (493)
Q Consensus 168 ~l~~~~gw~~~f~~~~~~~~l~~i~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (493)
++.+++|||+.|++.+++.++..+... ..||++++++ +
T Consensus 166 ~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~-----------------------------~------------ 204 (394)
T PRK10213 166 FLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS-----------------------------H------------ 204 (394)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc-----------------------------c------------
Confidence 999999999999988766555443332 3455431110 0
Q ss_pred hhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcce-eeeeeccCCCC
Q 011112 247 KKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVM-FYYQTEILNLE 325 (493)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~g~s 325 (493)
..+ +.++.+|+|.++......++............ +.| .++.|++
T Consensus 205 -----------------------------~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s 250 (394)
T PRK10213 205 -----------------------------QKQ----NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVY-MNLAGFG 250 (394)
T ss_pred -----------------------------chh----HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCC
Confidence 000 11234567776654433333222111111222 334 3457999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHH
Q 011112 326 ASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQ 405 (493)
Q Consensus 326 ~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 405 (493)
+.+.+.......++.+++..+.+++.||.+ |+.+..+..+..+..+...... ++.+.......+..+...
T Consensus 251 ~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 251 VDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG---------SDKIVATGVAIIWGLTFA 320 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHHHHH
Confidence 999999888888899999999999999954 4444444333333222111110 111111111222333333
Q ss_pred hhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 406 FKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 406 ~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.......+++.+..| ++++...++..+..++|..+|+.++|.+.|.+|+
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~ 369 (394)
T PRK10213 321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGL 369 (394)
T ss_pred hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 333334556777777 4567788888889999999999999999998764
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=1.5e-26 Score=238.85 Aligned_cols=381 Identities=13% Similarity=0.085 Sum_probs=246.6
Q ss_pred hhhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHH
Q 011112 6 NVFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~i 83 (493)
|+.+|...+.+.+.|+++.++. .+.... +.+++|+|+|.+++|+..+.+.+++.+ +++.|+++||+ +||+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~~~ 76 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAG-LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-----GARRWI 76 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHH-HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-----ChHHHH
Confidence 3456777777888888888875 555554 466889999999999999999999887 79999999995 677888
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS 163 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~ 163 (493)
..+.++..++.+.+++.+ +++.+++.|++.|++.+...+...+++.|..+ +++|+++.+++.....+|.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~---~~~rg~~~~~~~~~~~~g~~~~~ 149 (412)
T TIGR02332 77 AGIMVLWGIASTATMFAT----GPESLYLLRILVGIAEAGFLPGILLYLTFWFP---AYFRARANALFMIAMPVTMALGL 149 (412)
T ss_pred HHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 889888888888887765 46788899999999999887777788888884 58899999999999999999999
Q ss_pred HHHHHhhc------cccHHHHHHHHHHHHHHHHH-Hhhccccccccchh--hhcccccCCCcccCCCCcccCCCCCcccc
Q 011112 164 LLGGYALT------NIEIDRIFLLFTVLPAIQLL-SCGLVKENRVSTKV--LKEFSSSNGYHQVNGNESILDDEDGFSEE 234 (493)
Q Consensus 164 ~i~g~l~~------~~gw~~~f~~~~~~~~l~~i-~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (493)
.+++++.+ ..|||++|++.+++.++..+ .++++||++++.+. .++++..++ +.++.+. ..++ +++
T Consensus 150 ~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~--~~~~~~~-~~~~---~~~ 223 (412)
T TIGR02332 150 ILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKE--MIDNDQL-TLEQ---PEG 223 (412)
T ss_pred HHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHH--HHHhccc-cccc---ccc
Confidence 99998864 46999999998877766554 44567887643210 000000000 0000000 0000 000
Q ss_pred chhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcce
Q 011112 235 KYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVM 314 (493)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 314 (493)
. ..+++ . ..+ ..++.+++|.++...+..++.........+..
T Consensus 224 ~-----~~~~~-------~----------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (412)
T TIGR02332 224 A-----FAHAA-------M----------------------PQR----SMLREIFTPAIMLYTLAYFCLTNTLSAINIWT 265 (412)
T ss_pred c-----ccccc-------c----------------------cHH----HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 0 011 11222335666554443333222222233344
Q ss_pred eeeeec-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHH-HHHHHHHHhhhhhhheeccccccCccCceE
Q 011112 315 FYYQTE-ILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLL-TQVGLSILSFLDIVLVSRMNLTVGISDKTM 392 (493)
Q Consensus 315 ~~~~~~-~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~-~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~ 392 (493)
+.|+++ ..|+|..+.+.......++.+++.++.+++.||+++|+...+ ..+...+. +... ... .....
T Consensus 266 p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~-~~~~--~~~-------~~~~~ 335 (412)
T TIGR02332 266 PQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAG-WLLA--SAT-------DHNLI 335 (412)
T ss_pred HHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHH-HHHH--Hhc-------CCHHH
Confidence 556655 247788888888888888999999999999999987775332 22222222 1111 110 11111
Q ss_pred eeehhHHHHHHHHhhHhHH-HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 393 VLYGSALVDAVNQFKFMPF-LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
.+.. ......+.....+. .+...+..|++.+++++|+.+...++|+.++|.+.|.+.|..|
T Consensus 336 ~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 336 QLLG-IIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred HHHH-HHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 1100 11111111111122 2344567899999999999999999999999999999988754
No 20
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.95 E-value=1.3e-26 Score=243.33 Aligned_cols=376 Identities=12% Similarity=0.032 Sum_probs=240.2
Q ss_pred hhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 10 VSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 10 ~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
++.+.+..+.|++..++. ......++ +++++|.|.++.|++.+.+.+++.+ +|++|+++||+ +||+.+..+.
T Consensus 28 ~~i~~~~~~~~~~~y~~r~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----g~r~~l~~~~ 101 (467)
T PRK09556 28 MQSYLVVFIGYLTMYLIRKNFKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-----NTKQFLPFLL 101 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-----CccchHHHHH
Confidence 334445556666666654 55555554 5778999999999999999999987 89999999995 5777777777
Q ss_pred HHHHHHHHHHhhcc-cchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 88 VLSLVPWLILGLNA-FFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 88 ~l~~~~~~~~~~~~-~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
++..+..+.++... ....+++.+++.|+++|++.+...+...+++.|.. |+++||+++|++....++|.++++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~---~~~~rg~a~gi~~~~~~lG~~l~~~i~ 178 (467)
T PRK09556 102 ILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT---PRRKRGRFLGFWNISHNLGGAGAGGVA 178 (467)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc---CccceeeeEEeeecccchhhhHHHHHH
Confidence 66666555544321 01136778899999999999888888889998888 458999999999999999999999998
Q ss_pred HHhhccc---cHHHHHHHHHHHHHHHHHHhh-ccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhh
Q 011112 167 GYALTNI---EIDRIFLLFTVLPAIQLLSCG-LVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKK 242 (493)
Q Consensus 167 g~l~~~~---gw~~~f~~~~~~~~l~~i~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (493)
.++.++. +||..|.+.+++.++..+..+ +.++++++.+...+ ++..++.. .++.. + .
T Consensus 179 ~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~------~~~~~~~~---~~~~~---~-------~ 239 (467)
T PRK09556 179 LWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKA------EEIFGEPI---SEEDK---E-------T 239 (467)
T ss_pred HHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCCh------hhcccCcc---chhhh---c-------c
Confidence 8776653 699999888877766655443 44554432210000 00000000 00000 0 0
Q ss_pred hhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccC
Q 011112 243 RKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEIL 322 (493)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 322 (493)
+++. . +.++.+ ....+|+|.+|...+..++.+..........+.|+++.+
T Consensus 240 ~~~~------~----------------------~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~ 289 (467)
T PRK09556 240 ESTD------M----------------------TKWQIF--VEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQEL 289 (467)
T ss_pred cccc------C----------------------cHHHHH--HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0000 0 111111 112578888887665544433333333334566777779
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHH
Q 011112 323 NLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDA 402 (493)
Q Consensus 323 g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 402 (493)
|+|..+.++......++.+++.++.|++.||.++|+.+........+.... ..... .++........+....
T Consensus 290 g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~G~ 361 (467)
T PRK09556 290 GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL-GVYQH-------ATSEYMYLASLFALGF 361 (467)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH-HHHHh-------cCcHHHHHHHHHHHHH
Confidence 999999998877788889999999999999999888766544333322111 11110 0111111011111111
Q ss_pred HHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhh-hhhhhHhHHHHhHH
Q 011112 403 VNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNF-GSTVGSFFGAGLAS 451 (493)
Q Consensus 403 ~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~l-g~~~~~~i~g~l~~ 451 (493)
.......+......|..|++.+|++.|+.++..++ |..++|.+.|.+.|
T Consensus 362 ~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 362 LVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 11011111224567999999999999999999997 66899999999998
No 21
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=5.9e-26 Score=246.22 Aligned_cols=183 Identities=13% Similarity=0.116 Sum_probs=146.1
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++|..++++.+.++..+++. .+.. +.|.+.+++|++..+.+++.+++.+++.+ .+++|+++||+ +||+.+++
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~-ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-----GRR~~lii 237 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGF-VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-----GRKQCLLI 237 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHH
Confidence 34555555556667777765 4444 44566778999999999999999999888 68999999995 67778888
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.++..++.+++++++ +++.++++|++.|++.+...+...+++.|.. |+++||+..++...+..+|.++++.+
T Consensus 238 ~lil~~i~~ll~afa~----s~~~llv~R~l~G~g~g~~~p~~~~~isE~~---p~~~Rg~~~g~~~~~~~iG~ila~~l 310 (742)
T TIGR01299 238 CLSVNGFFAFFSSFVQ----GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFL---AQEKRGEHLSWLCMFWMIGGIYAAAM 310 (742)
T ss_pred HHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877777664 5678889999999999999999999999998 45899999999999999999999988
Q ss_pred HHHhhcc-------------ccHHHHHHHHHHHHHHHHHHhhccccccccc
Q 011112 166 GGYALTN-------------IEIDRIFLLFTVLPAIQLLSCGLVKENRVST 203 (493)
Q Consensus 166 ~g~l~~~-------------~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~ 203 (493)
+..+..+ .+||+.+++.++..++..+..+++||+|++.
T Consensus 311 a~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL 361 (742)
T TIGR01299 311 AWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFF 361 (742)
T ss_pred HHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 8766543 3689998887766555555667799998764
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=4.2e-26 Score=230.89 Aligned_cols=336 Identities=13% Similarity=0.079 Sum_probs=229.9
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
.++.|.+++++|+|.+++|+..+++.+++.+ +|++|+++||+ +||+.++.+.++.+++...+++.+ +++.
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-----G~r~~~~~~~~~~~~~~~~~~~~~----~~~~ 93 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-----GPRAVAMLGGILYGLGFTFYAIAD----SLAA 93 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-----CccchhHHhHHHHHHHHHHHHHHH----HHHH
Confidence 4456677889999999999999999999987 89999999995 567777888888888888777765 5778
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQ 189 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~ 189 (493)
+.+.|++.+++.+.........+.+.. +++|+++.++......+|..+++.+.+.+.+..+||+.|++.+++.++.
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 169 (377)
T TIGR00890 94 LYLTYGLASAGVGIAYGIALNTAVKWF----PDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLV 169 (377)
T ss_pred HHHHHHHHhHHHHHHHHhHHHHHHHHc----CcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 889999999988876655555555554 3679999999999999999887777777777889999999988777766
Q ss_pred HHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCc
Q 011112 190 LLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNP 268 (493)
Q Consensus 190 ~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (493)
.+.. ++.+|+++++++ +++ +. +
T Consensus 170 ~~~~~~~~~~~~~~~~~--------~~~-----------------~~---------~----------------------- 192 (377)
T TIGR00890 170 IVLGAFLIGYPPGQLIK--------TNI-----------------EV---------S----------------------- 192 (377)
T ss_pred HHHHHHheecCchhccc--------cCc-----------------cc---------c-----------------------
Confidence 6544 345554332210 000 00 0
Q ss_pred hhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 011112 269 LVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYN 348 (493)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~ 348 (493)
..+ ++.++.+|+|+++...+..++............++|. +++|.++.+.+.......++.+++.++.+
T Consensus 193 -------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 261 (377)
T TIGR00890 193 -------VKD---YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLG 261 (377)
T ss_pred -------hhh---hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0123445677766544333322221111111223343 44788888888888888889999999999
Q ss_pred HHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHH
Q 011112 349 GYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLF 428 (493)
Q Consensus 349 ~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~ 428 (493)
++.||.++|+.+..+.++..+..+.. ..... ......+....+.....+........++.|..|++++++.+
T Consensus 262 ~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (377)
T TIGR00890 262 ALSDKIGRQKTMSIVFGISAVGMAAM-LFIPM-------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANY 333 (377)
T ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHH-HHccc-------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHh
Confidence 99999999998888777666543221 11110 01111111111122222222223346788999999999999
Q ss_pred HHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 429 ALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 429 gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
|+.+...++|..++|.+.|.+.+..|+
T Consensus 334 g~~~~~~~~g~~~~~~~~g~l~~~~g~ 360 (377)
T TIGR00890 334 GFLYTAKAVAGIFGGLIASHALTEIGF 360 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 999999999999999999999987764
No 23
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=7.1e-26 Score=228.98 Aligned_cols=335 Identities=19% Similarity=0.165 Sum_probs=222.3
Q ss_pred HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCC-CCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 29 VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKG-RKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g-~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
....++.+ .+|+|+|.+++|+..+. .+++.++|++|+++||++.++ .|||++++.+.++..++...+++.++. .+.
T Consensus 7 ~~~~~~~~-~~~~g~s~~~~g~~~~~-~~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~-~~l 83 (356)
T TIGR00901 7 VGNTLPYW-LRSKNVSLKTIGFFSLV-GLPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS-TDL 83 (356)
T ss_pred HHhHHHHH-HHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc-hhH
Confidence 33444444 56799999999987544 678777999999999986542 256667788888887777677666432 244
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc--------HHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE--------IDRIF 179 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g--------w~~~f 179 (493)
+.+....++.+++.+..+++.++++.|..+ +++|+++.++...+..+|.++++.+++.+.++.+ ||.+|
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAWRLEILS---DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 555666667788889999999999999984 4899999999999999999999999999998888 99999
Q ss_pred HHHHHHHHHHHHHhh-ccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhh
Q 011112 180 LLFTVLPAIQLLSCG-LVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIR 258 (493)
Q Consensus 180 ~~~~~~~~l~~i~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (493)
++.+++.++..+..+ ..||+++++.. + ++ .+ .
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e~~~~~~~--------~-------------------~~--------~~-------~----- 193 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKEPQEDASV--------P-------------------KP--------LT-------Q----- 193 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCCCccccc--------c-------------------hh--------HH-------H-----
Confidence 988876655444444 34654321100 0 00 00 0
Q ss_pred hccCCCCCCchhHHHHhhHHHHHHHHHHhhcccc---hHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHH-
Q 011112 259 KSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPE---ILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARV- 334 (493)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~- 334 (493)
+.++ .+.+.+++|. ++...+..++............++|..+ .|+++++.|....
T Consensus 194 -----------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~ 252 (356)
T TIGR00901 194 -----------------AVLK---PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKI 252 (356)
T ss_pred -----------------HHHH---HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHH
Confidence 1112 2233445554 4444433333233222233344566666 8999999998754
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccc-cccCccCceEeeehhHHHHHHHHhhHhHHHH
Q 011112 335 VGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMN-LTVGISDKTMVLYGSALVDAVNQFKFMPFLI 413 (493)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~-~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~ 413 (493)
.+.++.+++.++++++.||.++|+.+..+.++..+............. ...+.++.+.+.....+..+..+....+..+
T Consensus 253 ~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 332 (356)
T TIGR00901 253 NGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVA 332 (356)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 455778899999999999999999988887776654332221111100 0000011121222223334444556666788
Q ss_pred HHhhcCCCCchHHHHHHHHHHHhh
Q 011112 414 LSGQLCPPGIEGTLFALFMSISNF 437 (493)
Q Consensus 414 ~~~~~~p~~~~gt~~gl~~~~~~l 437 (493)
+++|.+|++++|+.+|++++..++
T Consensus 333 ~~~~~~p~~~~g~~~g~~~~~~~~ 356 (356)
T TIGR00901 333 FLSKLSNPKFGATQMALLSSLSAL 356 (356)
T ss_pred HHHHhcCCCccHHHHHHHHHHHhC
Confidence 999999999999999999887764
No 24
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.95 E-value=1e-25 Score=228.68 Aligned_cols=328 Identities=13% Similarity=0.052 Sum_probs=207.6
Q ss_pred HHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 30 WTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
..+..|.+++|+|+|+++.|+..+.+.+++.+ ++++|+++||+ +||+.++.+......+.. +.... .+++
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-----grr~~~~~~~~~~~~~~~-~~~~~---~~~~ 80 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-----FKRWFLFGSLATFAAAAG-RLLDP---FNYE 80 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHHHHHHHHHHHHHH-HHHHh---ccHH
Confidence 44555666889999999999999999999887 78999999995 466665554444433322 22221 2577
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
.+++.|+++|++.+.. .+....+.|.. |+++|+++.++...+..+|.++++.+++++.+++|||+.|++.++++++
T Consensus 81 ~l~~~R~l~G~g~~~~-~~~~~~~~~~~---~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~ 156 (368)
T TIGR00903 81 WLLACQLLAALGQPFL-LNAFAPAASQI---REERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAA 156 (368)
T ss_pred HHHHHHHHHHhHhHHH-HHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 8999999999998864 45556667776 4599999999999999999999999999999999999999998888777
Q ss_pred HHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCC
Q 011112 189 QLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNN 267 (493)
Q Consensus 189 ~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (493)
..+. .+++||++++++ +.+ +
T Consensus 157 ~~~~~~~~lp~~p~~~~---------~~~-----------------~--------------------------------- 177 (368)
T TIGR00903 157 GIILVLAALPALPFQAA---------EGF-----------------G--------------------------------- 177 (368)
T ss_pred HHHHHHHHcCCCCCCCC---------CCc-----------------c---------------------------------
Confidence 6654 456788754321 000 0
Q ss_pred chhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011112 268 PLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTY 347 (493)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~ 347 (493)
.++..+++++.+|+|.++...+..++............+.|+.+ .|+|.. .+.......+...++....
T Consensus 178 ---------~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g~~~~ 246 (368)
T TIGR00903 178 ---------FKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIGVAVI 246 (368)
T ss_pred ---------hHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHHHHHh
Confidence 00001234567788888877655555444433344445666644 678864 5554444444444443222
Q ss_pred HHHHhcCChhHHHHH-HHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHH
Q 011112 348 NGYLKRLKLRRILLL-TQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGT 426 (493)
Q Consensus 348 ~~~~~~~~~r~~l~~-~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt 426 (493)
....||.++|+.... ..++..+. +..+... .+....+....+..+.....+...+++.+|.+|++.||+
T Consensus 247 ~d~~~r~~~r~~~~~~~~~~~a~~-~~~~~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt 316 (368)
T TIGR00903 247 PDRVARAGLRSIYIRAAALLIAAF-FLALAFE---------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGK 316 (368)
T ss_pred hHHhhhhhhHHHHHHHHHHHHHHH-HHHHHHc---------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCc
Confidence 222233343443332 22222221 1111110 011111111111222222222335678999999999999
Q ss_pred HHHHHHHHHhhhhhhhHhHHHHhH
Q 011112 427 LFALFMSISNFGSTVGSFFGAGLA 450 (493)
Q Consensus 427 ~~gl~~~~~~lg~~~~~~i~g~l~ 450 (493)
+.|+.++.+++++.++|.+.+.+.
T Consensus 317 ~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 317 AAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999989988877666
No 25
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=1.3e-25 Score=232.18 Aligned_cols=379 Identities=15% Similarity=0.101 Sum_probs=245.7
Q ss_pred HHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHH
Q 011112 16 ICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVP 93 (493)
Q Consensus 16 ~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~ 93 (493)
+....++..+. ++....++.+ .++++.+..+.|+..+...+++.+ ++++|+++||+ +||+.++.+..+.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-----g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQ-IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-----DRKKLILLARGTCGLG 95 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-----CCceEEEehHHHHHHH
Confidence 44445555554 3555555444 556888999999999999999887 79999999995 5666776776666665
Q ss_pred HHHHhhcc-cchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011112 94 WLILGLNA-FFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN 172 (493)
Q Consensus 94 ~~~~~~~~-~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~ 172 (493)
...+.... ...++++.+.+.|++.+++.+...++.++++.|..+ +++|+++.++.....++|..+|+.+++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~ 172 (417)
T PRK10489 96 FIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVG---RENLMQAGAITMLTVRLGSVISPALGGLLIAA 172 (417)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC---HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 54433210 001256677889999999888888888888888874 48899999999999999999999999999998
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhh
Q 011112 173 IEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKK 252 (493)
Q Consensus 173 ~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (493)
.+|++.|++.++..++..+..+.+||++++.+. + ++ ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~-----------------~~--------~~------- 210 (417)
T PRK10489 173 GGVAWNYGLAAAGTFITLLPLLRLPALPPPPQP----------R-----------------EH--------PL------- 210 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc----------c-----------------cc--------ch-------
Confidence 899999988776655544444556665432210 0 00 00
Q ss_pred hhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHH
Q 011112 253 RMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTA 332 (493)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~ 332 (493)
. +.++ .++..+++|.++...+..++... ........+.|..+.+|+++...|.+
T Consensus 211 ~----------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~ 264 (417)
T PRK10489 211 R----------------------SLLA---GFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLL 264 (417)
T ss_pred H----------------------HHHH---HHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHH
Confidence 0 1111 22334566665444333222111 11222234556666689999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHH
Q 011112 333 RVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFL 412 (493)
Q Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~ 412 (493)
.....++.+++.++.+++.||.++++.+..+.++..+... .+... ++.........+.............
T Consensus 265 ~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~ 334 (417)
T PRK10489 265 YAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVG-LFGLM---------PMWILAVLCLALFGYLSAISSLLQY 334 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHH-HHHcc---------chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999987777777777665554321 11111 1111111111112222222222235
Q ss_pred HHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCCC
Q 011112 413 ILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKGA 488 (493)
Q Consensus 413 ~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 488 (493)
+++.+..|++.||+.+|+++...++|..+|+.++|.+.+.+|... .......+..++..+....+||.+
T Consensus 335 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 335 TLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVA-------SASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhh-------HHHHHHHHHHHHHHHHHHhccccc
Confidence 678899999999999999999999999999999999999876432 122223333344444445666544
No 26
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=2.7e-25 Score=230.99 Aligned_cols=352 Identities=14% Similarity=0.077 Sum_probs=218.7
Q ss_pred HHHHHHHhHHHhHHHHHHHHHHhhhC---CCHhhHHHHHHHHHhhH---hh-hhhhhhcccccccCCCCchhHHHHHHHH
Q 011112 17 CLIYFTQGFRSFVWTAVSYQLKDKLK---FSPSASQFVSAVAFFPW---SI-KPLYGILSDCIPIKGRKRIPYLVISTVL 89 (493)
Q Consensus 17 ~~~~f~~g~~~~~~~~~~~~l~~~~g---~s~~~~g~~~s~~~l~~---~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l 89 (493)
.+.++++.++........+++.++++ .+..+.+...+++.+.+ .+ ++++|+++||+ +||+.++.+.++
T Consensus 28 ~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-----Grr~~l~~~~~~ 102 (432)
T PRK10406 28 SSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-----GRKKSMLISVCM 102 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHHH
Confidence 34577788876444555667788874 56665544444444443 35 67899999995 788899999999
Q ss_pred HHHHHHHHhhcccch----hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 90 SLVPWLILGLNAFFR----SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~----~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.++.+.++++++.+ .+...++++|+++|++.+...+...+++.|..+ +++||+..+........|..+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p---~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 103 MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAV---EGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCC---CCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999888876421 123468899999999999999999999999884 5899999999888888888888877
Q ss_pred HHHhh--------ccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchh
Q 011112 166 GGYAL--------TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYN 237 (493)
Q Consensus 166 ~g~l~--------~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (493)
+..+. +.+|||++|++.+++.++........||+++.+.+ + + +
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~--------~-~-----------------~--- 230 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR--------A-L-----------------K--- 230 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh--------h-h-----------------c---
Confidence 65543 25799999998776655443333345665432210 0 0 0
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHH-HHhcccCCCcceee
Q 011112 238 ISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFL-AHVAVPNLSTVMFY 316 (493)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l-~~~~~~~~~~~~~~ 316 (493)
++ . +. ++.+|+|+.+...+..++ ............+.
T Consensus 231 ------~~-------~----------------------~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ 268 (432)
T PRK10406 231 ------EA-------G----------------------SL-------KGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQK 268 (432)
T ss_pred ------cc-------c----------------------cH-------HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 11 122344544433222111 11111112223355
Q ss_pred eeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeeh
Q 011112 317 YQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYG 396 (493)
Q Consensus 317 ~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~ 396 (493)
|+.+..|++..+.+...........++.++.+++.||.++|+.+....++..+.......... + .......+..
T Consensus 269 ~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~ 342 (432)
T PRK10406 269 YLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ--N----VSSPYAAFGL 342 (432)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH--c----CCcHHHHHHH
Confidence 555668999888888766666666777888899999999999877665543332211111110 0 0111111111
Q ss_pred hHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhh-hhhhhHhHHHHhHHhhc
Q 011112 397 SALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNF-GSTVGSFFGAGLASSLS 454 (493)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~l-g~~~~~~i~g~l~~~~g 454 (493)
..+..........+..++.+|..|++.|++++|+.+.++++ .+...|.+.+.+ +..|
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g 400 (432)
T PRK10406 343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIG 400 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhC
Confidence 11111111222223456789999999999999999988775 344577777755 4433
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=2.3e-25 Score=227.65 Aligned_cols=342 Identities=17% Similarity=0.113 Sum_probs=230.4
Q ss_pred HHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
.+.+....+..+... .... ..|.+++++|.|.++.|+..+.+.++..+ +|++|+++||+ +||+.+..+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~ 78 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMG-VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-----SLKHILLFLVALC 78 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHh-ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-----ccHHHHHHHHHHH
Confidence 344556667777765 4444 44556788999999999999999999887 79999999995 6888888999999
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
.++.+++++++ +++.+++.|++.|++.+...+...+++.|..+ +++|+++++....+..+|..+|+.+++++.
T Consensus 79 ~~~~~l~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 79 VIGNAMFTLSS----SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIK---PGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHHhC----cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC---hHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 98888888775 57788899999999988877777778778764 478999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhh
Q 011112 171 TNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKN 249 (493)
Q Consensus 171 ~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
+..+||+.|++.+++.++..+.. ++.||.+++++ +
T Consensus 152 ~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~-----------------------------~--------------- 187 (382)
T PRK10091 152 QEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK-----------------------------G--------------- 187 (382)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc-----------------------------c---------------
Confidence 99999999999887766655433 44666432110 0
Q ss_pred hhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHH
Q 011112 250 QKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFL 329 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~ 329 (493)
+.++. ++.+|+++.+......++.+..........+++..+..|+|+.+.
T Consensus 188 --------------------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 237 (382)
T PRK10091 188 --------------------------GLREQ----FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSM 237 (382)
T ss_pred --------------------------CHHHH----HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 00000 122345554443322222111111111112334455589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHh
Q 011112 330 GTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFM 409 (493)
Q Consensus 330 gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 409 (493)
++......++.+++.++.+++.||.++|+.+..+..+..++.+...... +.....+...............
T Consensus 238 ~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~ 308 (382)
T PRK10091 238 TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG---------GMKTASLIFAFICCAGLFALSA 308 (382)
T ss_pred HHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH---------hhHHHHHHHHHHHHHHHHhhhH
Confidence 9988888899999999999999999999988887776655432211111 1111111111111111111122
Q ss_pred HHHH-HHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHh
Q 011112 410 PFLI-LSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASS 452 (493)
Q Consensus 410 ~~~~-~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~ 452 (493)
|... ...+..|++.++.. ..++..++|..+||.++|.+.|.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 309 PLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred HHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc
Confidence 3332 33444455555554 34667889999999999999986
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.95 E-value=1.6e-26 Score=235.01 Aligned_cols=368 Identities=17% Similarity=0.082 Sum_probs=239.5
Q ss_pred HHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHH
Q 011112 20 YFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLIL 97 (493)
Q Consensus 20 ~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~ 97 (493)
|+.+.++. ..... .|.+++++|.|..+.|+..+++.++..+ .+++|+++||+ +||+.+..+.++..++...+
T Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 3 TVINYLDRANLSFA-APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-----GARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred ehHHHHHHHhhhHh-HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-----CcceeeHHHHHHHHHHHHHH
Confidence 34444553 33333 4557888999999999999999998877 79999999995 56677778888888887777
Q ss_pred hhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHH
Q 011112 98 GLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDR 177 (493)
Q Consensus 98 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~ 177 (493)
++.+ +++.+++.|++.|++.+...+...+++.|..+ +++|++.+++......+|..+|+.+++.+.++.+||+
T Consensus 77 ~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 149 (399)
T TIGR00893 77 AFAG----AYVSLYILRVLLGAAEAPFFPGIILIVASWFP---ASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQW 149 (399)
T ss_pred HHHc----CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCC---HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchH
Confidence 7765 57788899999999999999999999999884 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhh
Q 011112 178 IFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFK 256 (493)
Q Consensus 178 ~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
.|++.+++.++..+.. ++.||++++.+...+ +++.. ..+....+... ++ ++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~---~~--------~~----------- 201 (399)
T TIGR00893 150 AFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTE-----EEKYI-VVGGLLAEQQG---KG--------PS----------- 201 (399)
T ss_pred HHHHHHHHHHHHHHHhhheecCCCCccccCCH-----HHHhh-cchhhcccccc---cc--------cc-----------
Confidence 9998887766655544 345655432211000 00000 00000000000 00 00
Q ss_pred hhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHH
Q 011112 257 IRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVG 336 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~ 336 (493)
++.....++.+|+|+++...+..++............+.|..+..|+|+.+.+......
T Consensus 202 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (399)
T TIGR00893 202 ---------------------TPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLP 260 (399)
T ss_pred ---------------------CCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHH
Confidence 00001234456777766655444443333332333345566677899999999988888
Q ss_pred HHHHHHHHHHHHHHHhcCChhH--HHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHH
Q 011112 337 WVGLMLGTYTYNGYLKRLKLRR--ILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLIL 414 (493)
Q Consensus 337 ~~~~~l~~~~~~~~~~~~~~r~--~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 414 (493)
.++.+++.++.+++.||.++|+ ....... ..+..+.........+. .+.....+....+...... ...+..++
T Consensus 261 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 335 (399)
T TIGR00893 261 GIVGFIGMILGGRLSDLLLRRGKSLVFARKT-AIIAGLVLSLLMFATNY---VNIPYAALALVALGFFGLG-AGAIGWAL 335 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccchhHHHHH-HHHHHHHHHHHHHHhcc---chhHHHHHHHHHHHHhchh-hhhHHHHH
Confidence 8888999999999999998885 1111111 11110000000000000 0111111111111111111 23344678
Q ss_pred HhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 415 SGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 415 ~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
..|..|++.|++++|+++.+.++|..+++.+.|.+.+..|
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 336 ISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred HHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 9999999999999999999999999999999999998765
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=2.6e-25 Score=232.41 Aligned_cols=356 Identities=13% Similarity=0.021 Sum_probs=220.0
Q ss_pred HHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHH
Q 011112 33 VSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLI 111 (493)
Q Consensus 33 ~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~ 111 (493)
..|+++++ |.|.++.|+..+.+.+++.+ +|++|+++||+ +||+.++.+.++.+++.+.+++.+....+++.++
T Consensus 51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-----g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 124 (452)
T PRK11273 51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-----NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMF 124 (452)
T ss_pred hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-----CCchhHHHHHHHHHHHHHHHHhhhcccccHHHHH
Confidence 34567777 99999999999999999987 89999999995 5677888888888888877776532223466778
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHH-HHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Q 011112 112 VLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGG-ICGSLLGGYALTNIEIDRIFLLFTVLPAIQL 190 (493)
Q Consensus 112 ~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~-~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~ 190 (493)
+.|++.+++.+...++....+.|.. |+++|++++|+++.+..+|. ..+++++..+....+||+.|++.+++.++..
T Consensus 125 ~~~~l~gi~~g~~~~~~~~~~~~~~---~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 125 VLLFLCGWFQGMGWPPCGRTMVHWW---SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVA 201 (452)
T ss_pred HHHHHHHHHHhccchHHHHHHHHhC---ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 8899999988887777777887876 45889999999999999886 4566654444344599999999887666654
Q ss_pred H-HhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCch
Q 011112 191 L-SCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPL 269 (493)
Q Consensus 191 i-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (493)
+ ..+++||++++...+++ +|.+ + +.....++ ...++ .
T Consensus 202 ~l~~~~~~~~~~~~~~~~~----~~~~--~--------~~~~~~~~-----~~~~~-------~---------------- 239 (452)
T PRK11273 202 LFAFAMMRDTPQSCGLPPI----EEYK--N--------DYPDDYNE-----KHEQE-------L---------------- 239 (452)
T ss_pred HHHHHHccCCHhhcCCCCh----hhhh--h--------cccccccc-----ccCCC-------c----------------
Confidence 4 34567776543210000 0000 0 00000000 00000 0
Q ss_pred hHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 011112 270 VIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNG 349 (493)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~ 349 (493)
+.++.++ ...+|+|.+|...+..++.+..........|.|.++..|++..+.+....+..++.+++.++.++
T Consensus 240 ------~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~ 311 (452)
T PRK11273 240 ------TAKQIFM--QYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW 311 (452)
T ss_pred ------cHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122111 23567888776554443323222222334466777778999888888877777888889999999
Q ss_pred HHhcC--ChhHHHHH-HHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHH
Q 011112 350 YLKRL--KLRRILLL-TQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGT 426 (493)
Q Consensus 350 ~~~~~--~~r~~l~~-~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt 426 (493)
+.||. ++|+...+ ...+..++ ++....... .........................++..|.+|++.+|+
T Consensus 312 l~dr~~~~r~~~~~~~~~~l~~~~-~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~ 383 (452)
T PRK11273 312 MSDKVFRGNRGATGVFFMTLVTIA-TIVYWLNPA-------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGT 383 (452)
T ss_pred HHHHHccCCcchHHHHHHHHHHHH-HHHHHHhcc-------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhh
Confidence 99998 44433222 11222221 111111100 111111111111111100011112245678999999999
Q ss_pred HHHHHHHHHhhhhhh-hHhHHHHhHHhhcC
Q 011112 427 LFALFMSISNFGSTV-GSFFGAGLASSLSI 455 (493)
Q Consensus 427 ~~gl~~~~~~lg~~~-~~~i~g~l~~~~g~ 455 (493)
++|+.++..++|+.+ +|.++|.+.|++|+
T Consensus 384 ~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~ 413 (452)
T PRK11273 384 AAGFTGLFGYLGGSVAASAIVGYTVDFFGW 413 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcc
Confidence 999999999998765 79999999998764
No 30
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.95 E-value=7.7e-25 Score=231.18 Aligned_cols=370 Identities=16% Similarity=0.105 Sum_probs=226.5
Q ss_pred hHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhh----HHHH--HHHHHhhHhh-hhhhhhcccccccCCCCchhHH
Q 011112 11 SFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSA----SQFV--SAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 11 ~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~----~g~~--~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~i 83 (493)
+..++..+.+++++++..+.....+++.++++.+..+ ++.+ .++.++++.+ ++++|+++||+ +||+.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-----Grr~~l 90 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-----GRQKIL 90 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHH
Confidence 3444556777889998633344456778888643322 2221 3556677777 68999999995 788899
Q ss_pred HHHHHHHHHHHHHHhhcccchh----hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLNAFFRS----STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGG 159 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~~~~~~----~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~ 159 (493)
..+.+++.++.++++++++... ....++++|+++|++.+...+...+++.|.. |+++||+..++...+..+|.
T Consensus 91 ~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~---p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 91 AITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS---PDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC---CCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999998874211 0123789999999999999999999999988 45899999999988888888
Q ss_pred HHHHHHHHHhh--------ccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCc
Q 011112 160 ICGSLLGGYAL--------TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGF 231 (493)
Q Consensus 160 ~lg~~i~g~l~--------~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (493)
.+|+.+...+. +++|||++|++.+++.++..+....+||+++..+.+++ .++.+ .+. .++
T Consensus 168 ~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~---~~~~~----~~~--~~~--- 235 (490)
T PRK10642 168 VLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDK---LEQGD----REG--LQD--- 235 (490)
T ss_pred HHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHh---hhhhc----ccc--ccc---
Confidence 88876665442 36799999998775544333344567887654321100 00000 000 000
Q ss_pred cccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccc-hHHHHHHHHHHHhcccCC
Q 011112 232 SEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPE-ILRPMAWFFLAHVAVPNL 310 (493)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~~~~~~~ 310 (493)
.++ . +.++.++. +++ ........++........
T Consensus 236 -----------~~~-------~----------------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 269 (490)
T PRK10642 236 -----------GPK-------V----------------------SFKEIATK------HWRSLLTCIGLVIATNVTYYML 269 (490)
T ss_pred -----------ccc-------C----------------------CHHHHHHH------hHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 11211111 111 111111111111111122
Q ss_pred CcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCc
Q 011112 311 STVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDK 390 (493)
Q Consensus 311 ~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~ 390 (493)
....+.|+++.+|++..+.++......++.+++.++.+++.||+|+|+.+..+.++..+.......... ....
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 342 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILIN-------SNVI 342 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh-------CCCH
Confidence 223455666668999877777777778888899999999999999999887776544332221111111 0111
Q ss_pred eEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhh
Q 011112 391 TMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSL 453 (493)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~ 453 (493)
........+..+...........+..+.+|++.|+++.|..+.+..+++.++|.+.+.+.+..
T Consensus 343 ~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 343 GLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111111111111222233456778999999999999877777788888999999888754
No 31
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.95 E-value=6.9e-25 Score=223.46 Aligned_cols=350 Identities=14% Similarity=0.180 Sum_probs=233.9
Q ss_pred hHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHH
Q 011112 11 SFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVL 89 (493)
Q Consensus 11 ~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l 89 (493)
+..+.+....+...+..-...+..|.+.+++|.|+++.++..+.+.++..+ ++++|+++||+ +||+.+..+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-----g~r~~~~~~~~~ 79 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-----GRRPVLLLGLFI 79 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-----CChHHHHHHHHH
Confidence 344444444555555542233344566788999999999999999998877 79999999995 577888888888
Q ss_pred HHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 90 SLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
..++.+.+...+ +.+.+.+.|++.+++.+...+..++++.|..+ +++|+++.++......+|..+|+.+++++
T Consensus 80 ~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 152 (385)
T TIGR00710 80 FALSSLGLALSN----NIETLLVLRFVQAFGASAGSVISQALVRDIYP---GEELSRIYSILMPVLALAPAVAPLLGGYI 152 (385)
T ss_pred HHHHHHHHHHHc----cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887777664 56678889999999999999999999999884 58899999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhh
Q 011112 170 LTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKK 248 (493)
Q Consensus 170 ~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
.++.+||++|++.+++.++..+.. ++.||+++++++ + +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-----------------~-------------- 191 (385)
T TIGR00710 153 LVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEAR----------I-----------------Q-------------- 191 (385)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc----------C-----------------C--------------
Confidence 999999999998887666555443 445665432210 0 0
Q ss_pred hhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHH
Q 011112 249 NQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASF 328 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~ 328 (493)
.++..++.++.+|+|+++...+...+............+.+..+..|+++.+
T Consensus 192 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (385)
T TIGR00710 192 ----------------------------ISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV 243 (385)
T ss_pred ----------------------------HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH
Confidence 0001122345567777765443322222222112222345555668999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhH
Q 011112 329 LGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKF 408 (493)
Q Consensus 329 ~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 408 (493)
.+.+.....++.+++.++.+++.||+++|+.+..+..+..++.+....... .. .+..........+.........
T Consensus 244 ~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~g~~~~~~~ 318 (385)
T TIGR00710 244 FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAI-LG----LGSWAMIIGPMMFVGIGNSMIS 318 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-hc----cchHHHHHHHHHHHHHHHHHHH
Confidence 999888888899999999999999999999888776666554322211110 00 0111111111111212222222
Q ss_pred hHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHH
Q 011112 409 MPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGA 447 (493)
Q Consensus 409 ~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g 447 (493)
........+..| +.++++.++.++..+.++.+.+.+.+
T Consensus 319 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 319 SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 223455666665 67899999999888765555544444
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=2.8e-25 Score=233.86 Aligned_cols=388 Identities=14% Similarity=0.119 Sum_probs=257.0
Q ss_pred HHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
+..+.+.+++..++. +.+..++ .+.+++|.|.++.++..+.+.++..+ .|++|+++||+ +||+.++.+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~ 77 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-----GTRRLFLISTFAF 77 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-----CcHHHHHHHHHHH
Confidence 445566678888875 5555554 55778999999999999999998877 79999999995 6788888999998
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
.++.+.++..+ +++.+++.|+++|++.+...+...+++.|..+ +++|+++.+++.....+|..+|+.+++++.
T Consensus 78 ~~~~~~~~~~~----~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~---~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 78 TLGSLLCGVAP----NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYP---PEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred HHHHHHHhCcC----CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 88888887765 57788999999999999999999999999984 589999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhh
Q 011112 171 TNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKN 249 (493)
Q Consensus 171 ~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
++.+||+.|++.+.+.++..+.. ++.||+++..+++.|.. +.. .........
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-------------------g~~----l~~~~~~~~---- 203 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFL-------------------GLL----LLSVGLGSL---- 203 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHH-------------------HHH----HHHHHHHHH----
Confidence 99999999999887766555433 44666443221110000 000 000000000
Q ss_pred hhhhhhhhhhccCCCCCCch--------------hHHHHhhHH--HHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcc
Q 011112 250 QKKRMFKIRKSQIPEKNNPL--------------VIQWFHSLK--AAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTV 313 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 313 (493)
.....+ .....|.+. .....++.+ +... -.+.+|+|.++...+..++...........
T Consensus 204 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (485)
T TIGR00711 204 ----LYGLSE-GPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYL 277 (485)
T ss_pred ----HHHHhh-CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000000000 000000000 0001 124677887766554444333322222333
Q ss_pred eeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEe
Q 011112 314 MFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMV 393 (493)
Q Consensus 314 ~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~ 393 (493)
.+.|.++..|+|+.+.|+...+..++.+++.++.+++.||.++|+.+..+.++..++......... + .......
T Consensus 278 ~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~--~----~~~~~~~ 351 (485)
T TIGR00711 278 LPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT--P----DTPFLAI 351 (485)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC--C----CCCHHHH
Confidence 466777778999999999988888999999999999999999999988887766654322110110 0 0111111
Q ss_pred eehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHh
Q 011112 394 LYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASS 452 (493)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~ 452 (493)
.....+..+..+....|......+..|++++|+++|+.++..++|+.+|+.+.+.+.+.
T Consensus 352 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 352 ALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222333334455666677889999999999999999999999999998888763
No 33
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=4.6e-25 Score=225.50 Aligned_cols=342 Identities=14% Similarity=0.056 Sum_probs=231.4
Q ss_pred HHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchh----HHHHHHHH
Q 011112 16 ICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIP----YLVISTVL 89 (493)
Q Consensus 16 ~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~----~ii~~~~l 89 (493)
+...||...+. ++....++.++ +++|.|.+++|...+++.+...+ +|++|+++||. +|+. .+..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~l 82 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-----NHIIIALRLLALASAI 82 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHHHHHHH
Confidence 45556666654 35555566665 56999999999999998887765 89999999985 3321 22222211
Q ss_pred HHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 90 SLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
..+ ..+... ++++.+++.|.+++.+.+...+..+++..+. .++|++..|......++|.++|+.++|++
T Consensus 83 ~~~--~~~~~~----~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-----~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 83 FAA--AFSAGA----HNAWLLFIAIGLFALFFSAGMPIGDALANTW-----QKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred HHH--HHHHhh----hhHHHHHHHHHHHHHHHccchhHHHHHHHHH-----HHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 111 122222 2577888889888887777777788886543 36789999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhh
Q 011112 170 LTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKN 249 (493)
Q Consensus 170 ~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
.+++|||..|++.+... +..+..+.++|++++++. + + +. + +
T Consensus 152 ~~~~g~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~--------~-~-----------~~----~----------~---- 192 (382)
T TIGR00902 152 IGMFDEQNILAILTAGL-AFMLIGFLIKPTIPPKDA--------I-P-----------ED----E----------S---- 192 (382)
T ss_pred HHHcChhHHHHHHHHHH-HHHHHHHHcCCCCCCCcc--------c-c-----------cc----c----------c----
Confidence 99999999998876442 222222333333211100 0 0 00 0 0
Q ss_pred hhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHH
Q 011112 250 QKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFL 329 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~ 329 (493)
. . .++..+.+|+|+++...+..++.........+..+.|.++ .|.++.+.
T Consensus 193 ---~----------------------~----~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~ 242 (382)
T TIGR00902 193 ---Q----------------------G----DSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASAT 242 (382)
T ss_pred ---c----------------------c----chhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHH
Confidence 0 0 0123456788888776655554344333333334556555 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHh
Q 011112 330 GTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFM 409 (493)
Q Consensus 330 gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 409 (493)
|.....+.++.+++..+.+|+.||++.|+.+.++.++..+..... ... ++.+.++....++....+....
T Consensus 243 g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~---------~~~~~~~~~q~l~g~~~~~~~~ 312 (382)
T TIGR00902 243 GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAII-GAI---------EAFPLIFLLQILHCGTFAVCHL 312 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH-HhH---------hhHHHHHHHHHHHHHHHHHHHH
Confidence 998778999999999999999999999999988888776653221 111 2222223334556666666666
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHH-HHhhhhhhhHhHHHHhHHhhc
Q 011112 410 PFLILSGQLCPPGIEGTLFALFMS-ISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 410 ~~~~~~~~~~p~~~~gt~~gl~~~-~~~lg~~~~~~i~g~l~~~~g 454 (493)
+.+.++.+. |+++++++++++++ ...+|..+++.++|.+.|++|
T Consensus 313 ~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 313 AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 677888887 99999999999875 456899999999999999875
No 34
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=1e-24 Score=224.61 Aligned_cols=339 Identities=17% Similarity=0.101 Sum_probs=228.5
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhh
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSS 106 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~ 106 (493)
.....+++ +.+++|.|..+.++..+.+.++..+ +++.|+++||+ +||+.++.+..+..++...+...+ +
T Consensus 31 ~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-----g~r~~l~~~~~~~~~~~~~~~~~~----~ 100 (406)
T PRK15402 31 MIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-----GRRPVMLAGVAFFILTCLAILLAQ----S 100 (406)
T ss_pred hHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CChHHHHHHHHHHHHHHHHHHHHc----c
Confidence 44444444 5778999999999999999998887 78999999995 677788888888888877776654 4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Q 011112 107 TWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLP 186 (493)
Q Consensus 107 ~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~ 186 (493)
++.+++.|++++++.+...+...+.+.|..+ +++|++..++......+|..+||.+++.+.++.+||+.|++.+++.
T Consensus 101 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~ 177 (406)
T PRK15402 101 IEQFTLLRFLQGIGLCFIGAVGYAAIQESFE---EADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALA 177 (406)
T ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 6778889999999988887788888888874 4788888999888888999999999999999999999999888776
Q ss_pred HHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCC
Q 011112 187 AIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEK 265 (493)
Q Consensus 187 ~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (493)
++..+.. +..||++++.++ + +
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~----------~-----------------~------------------------------- 199 (406)
T PRK15402 178 ALSFFGLWRAMPETAGRVGE----------K-----------------L------------------------------- 199 (406)
T ss_pred HHHHHHHHHhCCCCCccccc----------c-----------------c-------------------------------
Confidence 6555433 345665432210 0 0
Q ss_pred CCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHH
Q 011112 266 NNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTY 345 (493)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~ 345 (493)
+.++..+++.+.+++|+++...+..++............+.+..+.+|+++.+.|.......++.+++.+
T Consensus 200 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~ 269 (406)
T PRK15402 200 ----------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNL 269 (406)
T ss_pred ----------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0011112334567788776654433322221111112234455566899999999886666778889999
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehh-HHHHHHHHhhHhHHHHHHhhcCCCCch
Q 011112 346 TYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGS-ALVDAVNQFKFMPFLILSGQLCPPGIE 424 (493)
Q Consensus 346 ~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~ 424 (493)
+.+++.||.++|+.+..+.++..++.... ....... +....++... .+..........+.+... ...+++++
T Consensus 270 ~~g~l~~r~~~~~~~~~~~~~~~~g~~~~-~~~~~~~-----~~~~~~~~~~~~~~g~g~~~~~~~~~~~~-~~~~~~~~ 342 (406)
T PRK15402 270 TLARLTSRRPLRSLIRMGLWPMVAGLLLA-ALATVIS-----SHAYLWLTAGLSLYAFGIGLANAGLYRLT-LFSSDVSK 342 (406)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHcc-----cccHHHHHHHHHHHHHHHHHHhhhHHHHH-hhhccccc
Confidence 99999999999998888776655443221 1111000 1111111111 111121122222223333 34456899
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 425 GTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 425 gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
|+..++++..+.++..+|+.+++.+.+..+
T Consensus 343 g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 343 GTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 999999999999999999998888876543
No 35
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=6.1e-25 Score=225.67 Aligned_cols=373 Identities=15% Similarity=0.123 Sum_probs=236.6
Q ss_pred HHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHH
Q 011112 15 LICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLV 92 (493)
Q Consensus 15 ~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~ 92 (493)
.+...+++..+.. +....++.++++++|.|+++.|+..+++.+++.+ +|+.|+++||+ +||+.++.+.++..+
T Consensus 19 ~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-----g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 19 SIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-----GPKKAVVFGLCGCAL 93 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-----CCcchHHHHHHHHHH
Confidence 3566667777764 6667777778889999999999999999999887 89999999995 677788888877766
Q ss_pred HHHHHhhcccc----hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 011112 93 PWLILGLNAFF----RSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGY 168 (493)
Q Consensus 93 ~~~~~~~~~~~----~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~ 168 (493)
+...+...... ..+++.+++.|+++|++.+...+...+++.|..+ +++|++++++......+|.++|+.+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 170 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVG---ALHTGRVISWNGIATYGALAIGAPLGVL 170 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcC---hhhhccchhhhhhhhhHHHHHHHHHHHH
Confidence 65554433211 1245578899999999999988888888888874 5889999999999999999999999999
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhh
Q 011112 169 ALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKK 248 (493)
Q Consensus 169 l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
+.++.||++.+++.+++.++..+.....||+++++ + + +
T Consensus 171 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-------------------~----------~--- 208 (399)
T PRK05122 171 LYHWGGLAGLGLLIMLLALLGLLLARPRPAVPPVK----------G-------------------E----------R--- 208 (399)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCCCC----------c-------------------c----------c---
Confidence 99999999998876654433222222112211100 0 0 0
Q ss_pred hhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHH
Q 011112 249 NQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASF 328 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~ 328 (493)
. +.++.++..+. .... ..+..+ .........+.|..+ .|++ +
T Consensus 209 ----~----------------------~~~~~~~~~~~---~~~~--~~~~~~----~~~~~~~~~~~~~~~-~~~~--~ 250 (399)
T PRK05122 209 ----L----------------------PFRRVLGRVWP---YGMG--LALASI----GFGTIATFITLYYAA-RGWD--G 250 (399)
T ss_pred ----h----------------------hHHHHHHHHHH---HHHH--HHHHHH----HHHHHHHHHHHHHHH-cccc--c
Confidence 0 01111111110 0000 001111 000011111223322 3543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhH
Q 011112 329 LGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKF 408 (493)
Q Consensus 329 ~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 408 (493)
.+.......++.+++.++.+++.||.++|+.+..+..+..+.... .... ++.+..+....+..+.....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~l~G~~~~~~~ 320 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLL-LWLA---------PSPWMALIGAALTGFGFSLVF 320 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH-HHHh---------ccHHHHHHHHHHHHHhHHHHH
Confidence 444445566777888899999999999999887776665554221 1111 111111111122222222222
Q ss_pred hHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhh-cccCC
Q 011112 409 MPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLF-LIPKG 487 (493)
Q Consensus 409 ~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 487 (493)
........+..|++.+|+++|+++...++|..+++.+.|.+.+..|+ ...+.+..++.+++++... +.+|.
T Consensus 321 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 321 PALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGY--------PSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--------HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 22345677889999999999999999999999999999999887653 2344445555555555543 44566
Q ss_pred CCCCCC
Q 011112 488 ATGVPA 493 (493)
Q Consensus 488 ~~~~~~ 493 (493)
++.+|.
T Consensus 393 ~~~~~~ 398 (399)
T PRK05122 393 PRAVPE 398 (399)
T ss_pred cccCCC
Confidence 677773
No 36
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.2e-24 Score=223.87 Aligned_cols=357 Identities=14% Similarity=0.141 Sum_probs=232.4
Q ss_pred ChhhhhhhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCC
Q 011112 1 MKQLKNVFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRK 78 (493)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~ 78 (493)
|.+++|.-|....+ +....++..+. ......+++++++++|.|..++|...+...++..+ +|++|+++||+ +
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-----g 74 (400)
T PRK11646 1 MSRVSQARNLGKYF-LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-----G 74 (400)
T ss_pred CCCCcccccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-----C
Confidence 44555544433333 33555555554 35556667778888999999999999988887765 89999999995 5
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHH
Q 011112 79 RIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFG 158 (493)
Q Consensus 79 rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G 158 (493)
||+.++.+..+..++.+.+...+ +.+.+.+.|++++++.+...++.++++.|..+ +++|+++.|+.....++|
T Consensus 75 ~k~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~~~~a~~~~~~~~~~g 147 (400)
T PRK11646 75 AKPMIVTGMLMRAAGFATMAIAH----EPWLLWLSCILSGLGGTLFDPPRTALVIKLIR---PHQRGRFFSLLMMQDSAG 147 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHH
Confidence 78888899998888888777654 46778889999999988888888899888874 589999999999999999
Q ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchh
Q 011112 159 GICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYN 237 (493)
Q Consensus 159 ~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (493)
..+||.+++++. ..+||+.|++.+++.++..+.. ++.||++.+.. +
T Consensus 148 ~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------------~--- 194 (400)
T PRK11646 148 AVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV-----------------------------R--- 194 (400)
T ss_pred HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccccc-----------------------------c---
Confidence 999999999998 6799999998886655554332 34454321100 0
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeee
Q 011112 238 ISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYY 317 (493)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 317 (493)
. +.++ .+.+.+++|+++...+..+.............+.|
T Consensus 195 ---------------~----------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 234 (400)
T PRK11646 195 ---------------T----------------------PVRE---GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIM 234 (400)
T ss_pred ---------------h----------------------hhHH---HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 0 0011 12234566665543322221111111111223555
Q ss_pred eeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeeh
Q 011112 318 QTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLK-RLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYG 396 (493)
Q Consensus 318 ~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~-~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~ 396 (493)
.++..+ ++.+.+.......++...+....+++.| |.+.++.+..+.++..++.+. +... ++...+...
T Consensus 235 ~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-l~~~---------~~~~~~~~~ 303 (400)
T PRK11646 235 VNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFP-IGMV---------SNLQQLFTL 303 (400)
T ss_pred HHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH-HHHh---------hhHHHHHHH
Confidence 555434 6677887766555555444444455554 556666666665555444221 1111 111111111
Q ss_pred hHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 397 SALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
..+..........+..+++.+..|++++|+++|+++...++|..+||.++|.+.|..|
T Consensus 304 ~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 304 ICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 1111222222233346788899999999999999999999999999999999999753
No 37
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.94 E-value=1e-25 Score=228.29 Aligned_cols=369 Identities=16% Similarity=0.086 Sum_probs=237.9
Q ss_pred HHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHH
Q 011112 19 IYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLIL 97 (493)
Q Consensus 19 ~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~ 97 (493)
.|+...++........|++++++|.|..+.|+..++..++..+ ++++|+++||+ +||+.++.+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-----NPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-----CCeehhHHHHHHHHHHHHHH
Confidence 4555555542223334566888999999999999999998887 79999999995 67778888888888888887
Q ss_pred hhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH-HHHHHhhccccHH
Q 011112 98 GLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS-LLGGYALTNIEID 176 (493)
Q Consensus 98 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~-~i~g~l~~~~gw~ 176 (493)
.+.+ +++.+++.|++.+++.+...+..++++.|..+ +++|+++.++......+|..+++ .+++.+.++.+||
T Consensus 78 ~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (379)
T TIGR00881 78 GFST----SLWVMAALWALNGIFQGMGWPPCGRTVTKWFS---RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWH 150 (379)
T ss_pred HHhh----hHHHHHHHHHHHHhhccccCCchHHHHHHhcC---HhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCch
Confidence 7765 56788899999999999988899999999884 48899999999999999999999 5777787888999
Q ss_pred HHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhh
Q 011112 177 RIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMF 255 (493)
Q Consensus 177 ~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
+.|++.+++.++..+. .++.||+++..+.+.+ ++.+ .++.+ +.. ++ .++++ .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~-----~~~---~~------~~~~~------~-- 203 (379)
T TIGR00881 151 WVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPA----EEMP-NEEPD-----GDA---EK------KEEEL------T-- 203 (379)
T ss_pred hHHHHHHHHHHHHHHHHheeeCCCccccccCcc----ccCc-ccccc-----ccc---cc------ccccc------c--
Confidence 9999888776665544 3456665443211100 0000 00000 000 00 00000 0
Q ss_pred hhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHH
Q 011112 256 KIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVV 335 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~ 335 (493)
..+ ....+.+++|.++...+..++.+..........+.|..+..|+++.+.+.....
T Consensus 204 --------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 260 (379)
T TIGR00881 204 --------------------KKQ---IFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTL 260 (379)
T ss_pred --------------------chH---HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 011 122345677877665544333333222233334556666789999999998888
Q ss_pred HHHHHHHHHHHHHHHHhcCCh-hHH-HHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKL-RRI-LLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLI 413 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~-r~~-l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~ 413 (493)
..++.+++.++.+++.||... |+. +...........+....... ..+........................
T Consensus 261 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 333 (379)
T TIGR00881 261 YELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP-------AANPLMDLICLFALGFLVYGPQMLIGV 333 (379)
T ss_pred HHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc-------chhHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 888889999999999997532 222 22111111111111111100 011111111111111111111222345
Q ss_pred HHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 414 LSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 414 ~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
+..|..|++.||+++|++++..++|..+++.+.|.+.|.+|+.
T Consensus 334 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 334 IASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred HHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 6889999999999999999999999999999999999988764
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=1.3e-24 Score=228.49 Aligned_cols=376 Identities=15% Similarity=0.093 Sum_probs=235.3
Q ss_pred hhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhh--------CCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCC
Q 011112 7 VFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKL--------KFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKG 76 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~--------g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g 76 (493)
.++.+..++..+..+..+++. .+.... +.+++++ |.+.++.++..+.+.++..+ ++++|+++||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~---- 82 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTV-ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF---- 82 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhH-HHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 456666676677778888875 555544 4456666 89999999999999999987 78999999995
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhcc--------cchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHH
Q 011112 77 RKRIPYLVISTVLSLVPWLILGLNA--------FFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQ 148 (493)
Q Consensus 77 ~~rr~~ii~~~~l~~~~~~~~~~~~--------~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~ 148 (493)
+||+.++.+.++..++.+.+++.. ......+.+++.|+++|++.+...+...+++.|..+ +++||+++
T Consensus 83 -Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~---~~~rg~~~ 158 (479)
T PRK10077 83 -GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAP---AHIRGKLV 158 (479)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCC---hhhhhHHH
Confidence 678888888888887777666521 111235567899999999999999999999999984 58899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh--------ccccHHHHHHHHHHHHHHHHHHhhccccccccchhh--hc-ccc-cCCCc
Q 011112 149 SLSWLAMAFGGICGSLLGGYAL--------TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVL--KE-FSS-SNGYH 216 (493)
Q Consensus 149 g~~~~~~~~G~~lg~~i~g~l~--------~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~--~~-~~~-~~~~~ 216 (493)
++......+|..+++++++.+. ++.|||+.|++.++..++..+..+++||++++...+ .+ +.. .++.+
T Consensus 159 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~ 238 (479)
T PRK10077 159 SFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIM 238 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHc
Confidence 9999999999999988876553 457999999988777666555566789887543110 00 000 00000
Q ss_pred ccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHH-
Q 011112 217 QVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILR- 295 (493)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 295 (493)
+ + ++ .+ . ..++.++..+.- ..+.+..+.
T Consensus 239 ---~-------~-----~~--------~~-------~-------------------~~~~~~~~~~~~--~~~~~~~~~~ 267 (479)
T PRK10077 239 ---G-------N-----TL--------AT-------Q-------------------ALQEIKHSLDHG--RKTGGKLLMF 267 (479)
T ss_pred ---C-------C-----hh--------HH-------H-------------------HHHHHHHHHHHh--hhhhhhhcch
Confidence 0 0 00 00 0 000011111000 000011100
Q ss_pred ---HHHHHHH--HHhcccCCCcc---eeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 011112 296 ---PMAWFFL--AHVAVPNLSTV---MFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGL 367 (493)
Q Consensus 296 ---~~~~~~l--~~~~~~~~~~~---~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~ 367 (493)
.....+. ........+.. .+.+ .+..|++....++......+..+++.++.+++.||+++|+.+..+.++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~ 346 (479)
T PRK10077 268 GVGVIVIGVMLSVFQQFVGINVVLYYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGM 346 (479)
T ss_pred hHHHHHHHHHHHHHHHHhChhHHHHHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHH
Confidence 0110000 01111111111 1122 2347888766666666677788888999999999999999999888877
Q ss_pred HHHhhhhhhheeccccccCccCceEeeehh-HHHHHHHHhhHhHH-HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhH
Q 011112 368 SILSFLDIVLVSRMNLTVGISDKTMVLYGS-ALVDAVNQFKFMPF-LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFF 445 (493)
Q Consensus 368 ~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~-~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i 445 (493)
.+..+........ +....+.... .+........+.|. .++++|..|++.|++++|+.+..++++..+++.+
T Consensus 347 ~v~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~ 419 (479)
T PRK10077 347 AIGMFSLGTAFYT-------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWT 419 (479)
T ss_pred HHHHHHHHHHHhc-------CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7654322111110 1111111011 11111111223343 5789999999999999999999999999998877
Q ss_pred HHHhH
Q 011112 446 GAGLA 450 (493)
Q Consensus 446 ~g~l~ 450 (493)
.+.+.
T Consensus 420 ~p~~~ 424 (479)
T PRK10077 420 FPMMD 424 (479)
T ss_pred hHHHH
Confidence 76555
No 39
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=7.3e-25 Score=224.87 Aligned_cols=354 Identities=15% Similarity=0.130 Sum_probs=234.9
Q ss_pred HHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHH
Q 011112 32 AVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHL 110 (493)
Q Consensus 32 ~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l 110 (493)
+..|.+++|+|+|..+.|+..+.+.+++.+ +|+.|+++||+ +||+.++.+..+++++.+.+++++ +++.+
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-----G~r~~l~~~~~l~~~~~~~~~~a~----~~~~l 100 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-----SERRSVAISLLLIAVGALMRELYP----QSALL 100 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-----CchHHHHHHHHHHHHHHHHHHHCc----chHHH
Confidence 445566889999999999999999999987 79999999995 788899999999999999999886 46678
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cHHHHHHHHHHHHHHH
Q 011112 111 IVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-EIDRIFLLFTVLPAIQ 189 (493)
Q Consensus 111 ~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-gw~~~f~~~~~~~~l~ 189 (493)
++.|+++|++.+...+...+++.+.. | ++|+++++.+..+.+.|..+|+.+++++.++. +||+.+.+.++..++.
T Consensus 101 l~~r~l~Gig~~~~~~~~~~~~~~~~---~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 101 LSSALLGGVGIGIIQAVMPSVIKRRF---Q-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHhHHHHHhhhhhHHHHHHc---c-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 89999999999998888888777665 2 78999999999999999999999999998875 8999887766543333
Q ss_pred HHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCch
Q 011112 190 LLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPL 269 (493)
Q Consensus 190 ~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (493)
.+..+...+++++.+ + + +. .
T Consensus 177 ~~~~~~~~~~~~~~~---------~-~-----------~~---------------~------------------------ 196 (393)
T PRK09705 177 LFAWWWQSAREVASS---------H-K-----------TT---------------T------------------------ 196 (393)
T ss_pred HHHHHHHhcCCCccc---------c-C-----------CC---------------c------------------------
Confidence 222222221111110 0 0 00 0
Q ss_pred hHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 011112 270 VIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNG 349 (493)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~ 349 (493)
+ ..+.+++|+.+......++............+.|..+ .|++..+.|.......++.+++.++.++
T Consensus 197 ------~-------~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~ 262 (393)
T PRK09705 197 ------T-------PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPA 262 (393)
T ss_pred ------C-------CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 0 0011233443333322222222222222233455555 7999999999888888999999999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcC-CCCchHHHH
Q 011112 350 YLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLC-PPGIEGTLF 428 (493)
Q Consensus 350 ~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~gt~~ 428 (493)
+.||.++|+.+..+..+..++.... ..... .....+ . .+.....+...........+.. |++.+|+.+
T Consensus 263 l~~r~~~~~~~~~~~~l~~~~~~~~-~~~~~-------~~~~~~--~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~ 331 (393)
T PRK09705 263 MARHQDRRKLLMLALVLQLVGFCGF-IWLPL-------QLPVLW--A-MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLV 331 (393)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHH-HHccc-------hHHHHH--H-HHHHHhccchHHHHHHHHHhhcCCHHHHHHHH
Confidence 9999999998888766555542221 11110 001111 0 1111111111122233445555 467899999
Q ss_pred HHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhh-hhcccCCCCC
Q 011112 429 ALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAF-LFLIPKGATG 490 (493)
Q Consensus 429 gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~ 490 (493)
|+.+++.+++..++|.+.|.+.|..|. | ...+.+.+++.++.... ..+.||++.+
T Consensus 332 g~~~~~~~~~~~~gp~~~G~l~~~~g~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 332 AFMQGIGFIIAGLAPWFSGVLRSISGN----Y---LMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC----c---hHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999998762 2 22334444444444433 3466666543
No 40
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=4.9e-24 Score=219.43 Aligned_cols=379 Identities=11% Similarity=0.051 Sum_probs=233.4
Q ss_pred HHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHH
Q 011112 15 LICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLV 92 (493)
Q Consensus 15 ~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~ 92 (493)
...+..++..+. +.....+++++ +++|.|+++.|+..+.+.+++.+ +|++|+++||+ +||+.+..+..+..+
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-----g~k~~l~~~~~~~~~ 90 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-----GPLKTMMIGLLLWCV 90 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-----CcHHHHHHHHHHHHH
Confidence 345555554443 35555667776 46999999999999999998877 89999999995 677788888877777
Q ss_pred HHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHH-HHHHHHHHHhhc
Q 011112 93 PWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGG-ICGSLLGGYALT 171 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~-~lg~~i~g~l~~ 171 (493)
+...+........+.+.+++.|+++|++.+...+...+.+.+.. |+++|++++|+.....++|. ++|+.+++++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~ 167 (402)
T TIGR00897 91 GHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNT---KQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP 167 (402)
T ss_pred HHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 65544221100124566778999999988777666677777766 45899999999999999997 689999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhh
Q 011112 172 NIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQ 250 (493)
Q Consensus 172 ~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
+.||+..++.......+..+.. ++.+|+++++++ +++ + +.
T Consensus 168 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-----------------~----------~~---- 208 (402)
T TIGR00897 168 AFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHM--------QTR-----------------E----------KF---- 208 (402)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCCCCcccc--------cCC-----------------c----------ch----
Confidence 8897665554433222222222 334433221100 000 0 00
Q ss_pred hhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 251 KKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
. +.+ +...+.+|+|+++...+..++............+.|.+ ++|+|..+.+
T Consensus 209 --~----------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~ 260 (402)
T TIGR00897 209 --S----------------------ELG---KAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWL 260 (402)
T ss_pred --h----------------------hHH---HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHH
Confidence 0 111 12335677888766543333322222222223355554 4899998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhHHHHH-HHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHh
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLRRILLL-TQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFM 409 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~-~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 409 (493)
.......++.+++.+..+++.||.++|+.+.. +.+...+.... +...... . ............+...... ...
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~-l~~~~~~---~-~~~~~~~~~~~~~~G~~~~-~~~ 334 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLA-LYYIPQH---F-GHSFAVALIIAIALGIFLA-GYV 334 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH-HHHHHHc---c-CCcHHHHHHHHHHHHHHHH-HHH
Confidence 87777788899999999999999998876642 22222222111 1111000 0 0111111111112222211 233
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcc
Q 011112 410 PFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLI 484 (493)
Q Consensus 410 ~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (493)
|......+. +|+++|+++|+++...++++.++|.++|.+.|..|+ ...+.+.+++.++..+...++
T Consensus 335 ~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~--------~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 335 PLAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGA--------IGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--------HHHHHHHHHHHHHHHHHHHHh
Confidence 444445554 566899999999999999999999999999998663 234445555565655554444
No 41
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=2.8e-24 Score=223.72 Aligned_cols=395 Identities=13% Similarity=0.083 Sum_probs=236.1
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhh--CCCHhhHHHHHH-----HHHhhHhh-hhhhhhcccccccCCCC
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKL--KFSPSASQFVSA-----VAFFPWSI-KPLYGILSDCIPIKGRK 78 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~--g~s~~~~g~~~s-----~~~l~~~~-~~~~G~lsDr~~~~g~~ 78 (493)
++++..+...+.+++++++. ......+.++.+++ +.++. .++..+ +.++...+ +++.|+++||+ +
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-----G 92 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-----G 92 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-----c
Confidence 44555555666778888875 44333344556655 67776 455432 22233334 56789999995 6
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccchh----hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHH
Q 011112 79 RIPYLVISTVLSLVPWLILGLNAFFRS----STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLA 154 (493)
Q Consensus 79 rr~~ii~~~~l~~~~~~~~~~~~~~~~----~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~ 154 (493)
||+.++.+.+++.++.++++++++.+. ....++++|+++|++.+...+....++.|.. |+++|++..+....+
T Consensus 93 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~---p~~~rg~~~~~~~~g 169 (438)
T PRK09952 93 RKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA---PKNKKAFYSSGVQVG 169 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC---CCCCCcHHHHHHHHH
Confidence 788888999999999999998874211 1124778999999999998888889999987 458899999999999
Q ss_pred HHHHHHHHHHHHHHhh--------ccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccC
Q 011112 155 MAFGGICGSLLGGYAL--------TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILD 226 (493)
Q Consensus 155 ~~~G~~lg~~i~g~l~--------~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (493)
..+|.+++..+...+. +++|||++|++.+++.++........||+++..+++.+ + +
T Consensus 170 ~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~-------~-----~---- 233 (438)
T PRK09952 170 YGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHE-------Q-----A---- 233 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhh-------c-----c----
Confidence 9999988887776654 35799999998776543322222345666543211000 0 0
Q ss_pred CCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHH-HHHHHHh
Q 011112 227 DEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMA-WFFLAHV 305 (493)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~l~~~ 305 (493)
+ ++ ++ . +..+ ..+++|+.+.... ..++...
T Consensus 234 -~-----~~--------~~-------~----------------------~~~~------~l~~~~~~~~~~~~~~~~~~~ 264 (438)
T PRK09952 234 -A-----AK--------KR-------I----------------------PVIE------ALLRHPGAFLKIIALRLCELL 264 (438)
T ss_pred -c-----cc--------cc-------C----------------------CHHH------HHHHchHHHHHHHHHHHHHHH
Confidence 0 00 00 0 0011 1223444333221 1111111
Q ss_pred cccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccccc
Q 011112 306 AVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTV 385 (493)
Q Consensus 306 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 385 (493)
.........+.|.++.+|++............+..+++.++.+++.||+++|+.+..+.++..+..+........
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~----- 339 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA----- 339 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 111112223446566688888765555445566677888899999999999998887765544332111111100
Q ss_pred CccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHh-hhhhhhHhHHHHhHHhhcCCCCCccchH
Q 011112 386 GISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISN-FGSTVGSFFGAGLASSLSISSGSFDNLL 464 (493)
Q Consensus 386 g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~-lg~~~~~~i~g~l~~~~g~~~~~~~~~~ 464 (493)
.+.....+....+.....+....+..++..|..|++.|+++.++.+...+ +++.++|.+.+.+.+..+ ++|.
T Consensus 340 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~---~~~~--- 412 (438)
T PRK09952 340 -QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG---GSWH--- 412 (438)
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---CCch---
Confidence 01111111111222222222233456788999999999999999776655 788999999999988543 1232
Q ss_pred HHHHHHHhhhhhhhhhhhcccCCC
Q 011112 465 LGISIQALCTFIPIAFLFLIPKGA 488 (493)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~l~~~~ 488 (493)
..+....++.+++.+....+||..
T Consensus 413 ~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 413 SVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHccccc
Confidence 233444455555555555566543
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.94 E-value=3.3e-24 Score=221.40 Aligned_cols=338 Identities=14% Similarity=0.047 Sum_probs=223.2
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhh
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSS 106 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~ 106 (493)
+....+ |.+.+++|.|.++.++..+++.+++.+ ++++|+++||+ +||+.++.+..+..++.+.+..++ +
T Consensus 34 ~~~p~l-~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~a~----~ 103 (413)
T PRK15403 34 LIQPGI-INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-----GRRPVLITGALIFTLACAATLFTT----S 103 (413)
T ss_pred hhccCH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-----CchHHHHHHHHHHHHHHHHHHHcC----C
Confidence 444444 446788999999999999999999887 79999999995 677888889988888888887765 5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Q 011112 107 TWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLP 186 (493)
Q Consensus 107 ~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~ 186 (493)
++.+++.|+++|++.+...+...+.+.|..+ +++|++.+++......+|..+||++++.+.++.|||+.|++.+++.
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~ 180 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFG---QTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMG 180 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 6788999999999988777777777778774 4889999999999999999999999999999899999999988776
Q ss_pred HHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCC
Q 011112 187 AIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEK 265 (493)
Q Consensus 187 ~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (493)
++..+. .+++||++++++ + +.
T Consensus 181 ~i~~~~~~~~lp~~~~~~~-----------~-----------------~~------------------------------ 202 (413)
T PRK15403 181 LIAFVGLLLAMPETVKRGA-----------V-----------------PF------------------------------ 202 (413)
T ss_pred HHHHHHHHHhCCCCccccC-----------C-----------------CC------------------------------
Confidence 665543 345677643210 0 00
Q ss_pred CCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHH
Q 011112 266 NNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTY 345 (493)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~ 345 (493)
+.++..+++++.+|||.++...+..++............|.+.++..|+++.+.++.......+.++++.
T Consensus 203 ----------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~ 272 (413)
T PRK15403 203 ----------SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANA 272 (413)
T ss_pred ----------ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0011123455677888887655443332322222222345666777899999999988777778888888
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchH
Q 011112 346 TYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEG 425 (493)
Q Consensus 346 ~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 425 (493)
+.+++.+|...++.......+..++.++... ..... +..+............+.....|.....+....+..+|
T Consensus 273 l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~-~~~~~-----~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G 346 (413)
T PRK15403 273 IVARFVKDPTEPRFIWRAVPIQLVGLALLIV-GNLLW-----PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKG 346 (413)
T ss_pred HHHHHhccCCchhHHHHHHHHHHHHHHHHHH-HHHHc-----cccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCc
Confidence 8888876665555443332222222111111 00000 11110001111111122112222221112122233479
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhHHh
Q 011112 426 TLFALFMSISNFGSTVGSFFGAGLASS 452 (493)
Q Consensus 426 t~~gl~~~~~~lg~~~~~~i~g~l~~~ 452 (493)
++.+++++....+...++..++++.+.
T Consensus 347 ~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 347 TVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999988889999999988775
No 43
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=2e-24 Score=221.32 Aligned_cols=360 Identities=14% Similarity=0.093 Sum_probs=225.9
Q ss_pred HHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHH
Q 011112 16 ICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVP 93 (493)
Q Consensus 16 ~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~ 93 (493)
+....++..+. ++....++.++++++|.|..++|+..+++.+++.+ +|++|+++||+ +||+.++.+.+.+.++
T Consensus 20 ~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-----g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 20 IAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-----GAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-----cchHHHHHHHHHHHHH
Confidence 33334444443 35555566677888999999999999999999887 89999999995 5677777777666554
Q ss_pred HHHH---hhccc-chhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 94 WLIL---GLNAF-FRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 94 ~~~~---~~~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
.... +..+. ...+++.+++.|+++|++.+...+...+.+.|.. |+++|++++++...+...|..+|+.+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~---~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 95 GLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV---GPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4322 22221 1235677889999999999988888888888887 458999999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhh
Q 011112 170 LTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKN 249 (493)
Q Consensus 170 ~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
.++.|||+.+.+..+.+++........||++++++ + +
T Consensus 172 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~-----~--------------- 208 (392)
T PRK12382 172 HSHFGFAALALTTMVLPLLAWAFNGTVRKVPAHAG-----------------------E-----R--------------- 208 (392)
T ss_pred HhccChHHHHHHHHHHHHHHHHHHHhccCCCCCcc-----------------------c-----C---------------
Confidence 99999998877655433222222111222211000 0 0
Q ss_pred hhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHH
Q 011112 250 QKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFL 329 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~ 329 (493)
. +.++..+..+ ++.+.. .+..+. .. ......+.|..+ .|++. .
T Consensus 209 ---~----------------------~~~~~~~~~~----~~~~~~-~l~~~~-~~---~~~~~~~~~~~~-~~~~~--~ 251 (392)
T PRK12382 209 ---P----------------------SLWSVVGLIW----KPGLGL-ALQGVG-FA---VIGTFVSLYFAS-KGWAM--A 251 (392)
T ss_pred ---c----------------------hHHHHHHHHH----HhHHHH-HHHHHH-Hh---HHHHHHHHHHHh-cCCch--h
Confidence 0 1111111111 111111 111110 00 011111223333 45553 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHh
Q 011112 330 GTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFM 409 (493)
Q Consensus 330 gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 409 (493)
+.......++.+++.++.+++.||.++|+.+..+..+..+..+. .... ++.+..+....+..........
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 252 GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL-LWLA---------PTAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH-HHHc---------ccHHHHHHHHHHHHHHHHhHHH
Confidence 55445566777888899999999999999888877766654322 1111 1111111111222222222233
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh
Q 011112 410 PFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 410 ~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (493)
+..+...+.+|+++||+++|++++..++|..++|.++|.+.|.+|+. ..+.+.+++.+++.+..
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~--------~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYP--------SVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--------HHHHHHHHHHHHHHHHH
Confidence 34567788899999999999999999999999999999999987643 23444555555555444
No 44
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.94 E-value=3.9e-24 Score=219.44 Aligned_cols=352 Identities=12% Similarity=0.071 Sum_probs=236.9
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
.+.+....++..+. .+....+++. .+++|.++.+.++..+.+.+++.+ +|++|+++||+ +||+.++.+..+.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-----grr~vl~~~~~~~ 78 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-----PKGRVMFIANGIK 78 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-----CCchhhHHHHHHH
Confidence 34466677777774 4555555666 457999999999999999999987 89999999995 6788888998888
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
.++.+.+...+ + .++.|+++|++.+...+...+++.|+.+ +++|++++|+......+|.++||.++|++.
T Consensus 79 ~~~~~~~~~~~----~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~---~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 79 LLGCLLMLFGI----H---PLLAYGLVGIGAAAYSPAKYGILTELLP---GEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHH----H---HHHHHHHHHHHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777665543 2 1678899999999999999999999995 489999999999999999999999999998
Q ss_pred ccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhh
Q 011112 171 TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQ 250 (493)
Q Consensus 171 ~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
++ .|+..+.+.+...++..+..+.+||++++++++ + ++ .+
T Consensus 149 ~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~-------~-------------------~~--------~~----- 188 (393)
T PRK11195 149 DP-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQ-------S-------------------WN--------PI----- 188 (393)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHhcCCCCccccccc-------C-------------------CC--------HH-----
Confidence 86 488877766654433333445677754322100 0 00 00
Q ss_pred hhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 251 KKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
. ..++.++ ....++++|.........++.+..........+.|.++.+|+|+.+.|
T Consensus 189 --~-------------------~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G 244 (393)
T PRK11195 189 --A-------------------LLRDFFH---ACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPA 244 (393)
T ss_pred --H-------------------HHHHHHH---HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHH
Confidence 0 0001121 223445666654333222221221111222234566777899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhH
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMP 410 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~ 410 (493)
+......++.+++++..+|+.||.+.++.+..+..+ .+..+. +... ++.+..+....+.....+....|
T Consensus 245 ~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~-~~~~---------~~~~~~~~~~~~~G~~~g~~~~~ 313 (393)
T PRK11195 245 YLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLL-MALQ---------HSLLPAYPLLILIGALGGFFVVP 313 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHH-HHHH---------hHHHHHHHHHHHHHHhhhhhhhh
Confidence 999999999999999999999998888877666432 222111 1100 11111111122233334444566
Q ss_pred HHHHHhhcCCCCc-hHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 411 FLILSGQLCPPGI-EGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 411 ~~~~~~~~~p~~~-~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
..+.+++..|++. +|+..++.+...+++..++..+.+.+ +.+|+.
T Consensus 314 ~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~ 359 (393)
T PRK11195 314 MNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVP 359 (393)
T ss_pred HHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 6777777666654 79999999999999999999988855 567764
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.94 E-value=1.8e-24 Score=228.65 Aligned_cols=397 Identities=13% Similarity=0.074 Sum_probs=241.5
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
.+++....+.+.+++++++. .... ..+.+.+++|.|..+.++..+.+.++..+ .++.|+++||+ +||+.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~ 90 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITL-VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-----GRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHH
Confidence 34555666777788888875 4444 44556788999999999999999988877 78999999995 67788888
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.++..++.+.+++.+ +++.+.+.|++.|++.+...+..++++.|..+ +++|++++++......+|..+++.+
T Consensus 91 ~~~~~~~~~~~~~~~~----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~~~~~ 163 (496)
T PRK03893 91 SIVLFSVGTLACGFAP----GYWTLFIARLVIGMGMAGEYGSSATYVIESWP---KHLRNKASGFLISGFSIGAVVAAQV 163 (496)
T ss_pred HHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888777764 56778899999999999988889999999884 5889999999999999999999999
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhh
Q 011112 166 GGYALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKK 245 (493)
Q Consensus 166 ~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (493)
++.+.++.+||+.|++.++..++..+.....||+++..+.+.+ ++ + .++. .+ . ....++
T Consensus 164 ~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------~~-----~---~~~~----~~--~-~~~~~~ 222 (496)
T PRK03893 164 YSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAG------KA-----P---VRTM----VD--I-LYRGEH 222 (496)
T ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccc------cc-----c---chhH----HH--H-Hhcchh
Confidence 9999999999999987543322222222345655432210000 00 0 0000 00 0 000000
Q ss_pred hhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHH-------------HHHHHHHhhcccch---HHHHHHHHHHHhcccC
Q 011112 246 NKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKA-------------AIYSLYSAFRQPEI---LRPMAWFFLAHVAVPN 309 (493)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~~~---~~~~~~~~l~~~~~~~ 309 (493)
+..+.... ..... .....+....++ .........+.++. .......+........
T Consensus 223 ~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (496)
T PRK03893 223 RIINILLT-LAAAA--------ALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWP 293 (496)
T ss_pred HHHHHHHH-HHHHH--------HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccch
Confidence 00000000 00000 000000000000 00000000011111 0111111111111111
Q ss_pred CCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccC
Q 011112 310 LSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISD 389 (493)
Q Consensus 310 ~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~ 389 (493)
.....+.|+++++|++..+.+.+.....++.+++.++.+++.||.++|+.+..+.++..+..+. ..... ...
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~-------~~~ 365 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIP-VFAIG-------GAN 365 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH-Hhhcc-------ccH
Confidence 1223456666678999999999988888999999999999999999999887776554443221 11111 011
Q ss_pred ceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 390 KTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.+.......+....+........+++++.+|++.+|+.+|++++..++|..++|.++|.+.|.+|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~ 431 (496)
T PRK03893 366 VWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDL 431 (496)
T ss_pred HHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCCh
Confidence 111111111111122111223346788999999999999999999999999999999999998764
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=4.7e-25 Score=225.03 Aligned_cols=379 Identities=17% Similarity=0.188 Sum_probs=235.1
Q ss_pred chhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
+++........++..++.........|.+.+++|.+..+.++..+...++..+ ++++|+++||+ +||+.++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~~~~ 89 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-----GRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-----hhHHHHHHHH
Confidence 34444444455666666543333445566778999999999999888888877 78999999995 6778888888
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011112 88 VLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g 167 (493)
++..++.+++...+ +.+.+++.+++.+++.+...+...+++.|..+ +++|+++.++......+|..+|+.+++
T Consensus 90 ~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~~~~~~~ 162 (398)
T TIGR00895 90 LLFSVFTLLCALAT----NVTQLLILRFLAGLGLGGLMPNLNALVSEYAP---KRFRGTAVGLMFCGYPIGAAVGGFLAG 162 (398)
T ss_pred HHHHHHHHHHHHcc----chHHHHHHHHHHhcccccchhhHHHHHHHHcC---HHhhchhHhhHhhHHHHHHHHHHHHHH
Confidence 88888777776654 46677889999999999999999999999884 488999999999999999999999999
Q ss_pred HhhccccHHHHHHHHHHHHHHHHH-Hhhccccccccchhhhccc--ccCCCcccCCCCcccCCCCCccccchhhhhhhhh
Q 011112 168 YALTNIEIDRIFLLFTVLPAIQLL-SCGLVKENRVSTKVLKEFS--SSNGYHQVNGNESILDDEDGFSEEKYNISTKKRK 244 (493)
Q Consensus 168 ~l~~~~gw~~~f~~~~~~~~l~~i-~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (493)
++.+..+||+.|++.+++..+..+ ...++||+++....++++. ...++.. ++.+. .++...++++ . +
T Consensus 163 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~------~-~ 232 (398)
T TIGR00895 163 WLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIA-PQMQA--EAQSALPEQK------A-T 232 (398)
T ss_pred HHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHH-Hhccc--cccccccccc------c-c
Confidence 999999999999988655555443 3455777654321110000 0000000 00000 0000000000 0 0
Q ss_pred hhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCC
Q 011112 245 KNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNL 324 (493)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~ 324 (493)
+ . ..++..+.+++..+.+..+...+..++............+ +..++.|+
T Consensus 233 ~-------~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~ 282 (398)
T TIGR00895 233 Q-------G----------------------TKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGF 282 (398)
T ss_pred c-------c----------------------hhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCC
Confidence 0 0 1111111121111112221111111111111111111223 33455799
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHH
Q 011112 325 EASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVN 404 (493)
Q Consensus 325 s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 404 (493)
++.+.+.......++.+++.++.+++.||+++|+..... .+..+......... .+.........+..+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~ 352 (398)
T TIGR00895 283 SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGSTL---------FSPTLLLLLGAIAGFFV 352 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHHHh---------hCHHHHHHHHHHHHHHH
Confidence 998999888888889999999999999999988444333 33332222111100 11111111122233333
Q ss_pred HhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHh
Q 011112 405 QFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGL 449 (493)
Q Consensus 405 ~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l 449 (493)
+.......+++.+..|++.|++++|+++++.++|..++|.++|.+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 353 NGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 334444567899999999999999999999999999999998875
No 47
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=3.7e-24 Score=217.92 Aligned_cols=259 Identities=17% Similarity=0.195 Sum_probs=191.9
Q ss_pred HHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHH
Q 011112 33 VSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLI 111 (493)
Q Consensus 33 ~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~ 111 (493)
..|.+.+++|.|+++.++..+++.++..+ ++++|+++||+ +||+.+..+.++..++...+...+ +++.+.
T Consensus 13 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~ 83 (377)
T PRK11102 13 ALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-----GRKPVILGGTLVFALAAVACALAQ----TIDQLI 83 (377)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-----CChHHHHHHHHHHHHHHHHHHHHc----cHHHHH
Confidence 33444667999999999999999998887 79999999995 678888888888888888777664 466778
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Q 011112 112 VLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLL 191 (493)
Q Consensus 112 ~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i 191 (493)
+.|++.+++.+...+..++++.|..+ +++|++++++.+....+|..+++.+++.+.++.+||+.|++.+++.++..+
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFP---KEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999874 588999999999999999999999999999999999999988877666554
Q ss_pred H-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchh
Q 011112 192 S-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLV 270 (493)
Q Consensus 192 ~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (493)
. .++.||+++++++ + + .
T Consensus 161 ~~~~~~~~~~~~~~~----------~-----------------~----------~------------------------- 178 (377)
T PRK11102 161 LVFFFIPETLPKERR----------Q-----------------P----------F------------------------- 178 (377)
T ss_pred HHHHhCCccCccccc----------C-----------------C----------C-------------------------
Confidence 3 3456665432210 0 0 0
Q ss_pred HHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011112 271 IQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGY 350 (493)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~ 350 (493)
+.++..++..+.+++|+.+...+..++............+++..+..|+++.+.|.......++.+++..+.+++
T Consensus 179 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 253 (377)
T PRK11102 179 -----HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF 253 (377)
T ss_pred -----ChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011112234455677776554433322222111111222334455689999999998888889999999999999
Q ss_pred HhcCChhHHHHHHHHHHHHH
Q 011112 351 LKRLKLRRILLLTQVGLSIL 370 (493)
Q Consensus 351 ~~~~~~r~~l~~~~~~~~~~ 370 (493)
.||.++|+.+..+..+..+.
T Consensus 254 ~~r~g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 254 VRRVGALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHhCHHHHHHHHHHHHHHH
Confidence 99999999888877655443
No 48
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=1.2e-24 Score=223.26 Aligned_cols=354 Identities=13% Similarity=0.112 Sum_probs=233.0
Q ss_pred hhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
..+++..+...+.+++.+... .....+++ +++++|+|.++.++..+.+.+++.+ .+++|+++||+ +||+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----g~r~~~~ 76 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-----PLKRQLI 76 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHH
Confidence 345667776667777777653 44444444 5778999999999999999988887 78999999995 6777888
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
.+.++..++.+.+++.+ +++.+.+.|++.+++.+...+...+++.|..+ +++|+++.+.......+|..++|.
T Consensus 77 ~~~~~~~i~~~l~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~---~~~r~~~~~~~~~~~~~g~~~~~~ 149 (394)
T PRK03699 77 FGFALMILAVAGLMFSH----SLALFSIAMFVLGVVSGITMSIGTFLITHVYE---GKQRGSRLLFTDSFFSMAGMIFPI 149 (394)
T ss_pred HHHHHHHHHHHHHHHcc----hHHHHHHHHHHHHHhhHhhccchhHHhhhhcc---cchHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888777764 46678899999999988887778888888874 478999999988888999999999
Q ss_pred HHHHhhc-cccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhh
Q 011112 165 LGGYALT-NIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKR 243 (493)
Q Consensus 165 i~g~l~~-~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (493)
+.+++.+ ..+||+.|...+++.++..+..++ ++.++.++.+ +++ + +
T Consensus 150 ~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~-------~~~-----------~-----~--------- 196 (394)
T PRK03699 150 IAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHA-------PKA-----------D-----K--------- 196 (394)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccccccC-------ccc-----------c-----C---------
Confidence 9888764 579999999888766555443332 2212111000 000 0 0
Q ss_pred hhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCC
Q 011112 244 KKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILN 323 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g 323 (493)
. ..++ ..+|+++...+..++............+.|.++.+|
T Consensus 197 ---------~----------------------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 237 (394)
T PRK03699 197 ---------P----------------------VAKE--------KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFG 237 (394)
T ss_pred ---------c----------------------cccc--------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 0000 001222222222222111111122334566667789
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHH
Q 011112 324 LEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 324 ~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
+|+.+.+.+.....++..++.++.+++.||+++|+.+.....+..+.... .... ++..............
T Consensus 238 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~G~~ 307 (394)
T PRK03699 238 MSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYL-FVNT---------DDPSHLLYAILGLGFF 307 (394)
T ss_pred CChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH-HHHc---------CCchHHHHHHHHHHHH
Confidence 99999998877778888999999999999999999887766554443211 1111 1111111111122222
Q ss_pred HHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 404 NQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 404 ~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
....+....+...+..| +.+++..+......++|..++|.+.|.+.|..|+.
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~ 359 (394)
T PRK03699 308 SSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch
Confidence 22222222345556555 44577888889999999999999999999987753
No 49
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=1.6e-24 Score=225.48 Aligned_cols=373 Identities=13% Similarity=0.047 Sum_probs=228.0
Q ss_pred HHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHH
Q 011112 14 WLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLV 92 (493)
Q Consensus 14 ~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~ 92 (493)
+...+.+..............|++++ +|.|+++.++..+++.+++.+ ++++|+++||+ +||+.++.+.++.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-----NPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-----CCceehHHHHHHHHH
Confidence 33334444444332222334566675 699999999999999998887 78999999996 566777788888888
Q ss_pred HHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh-c
Q 011112 93 PWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL-T 171 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~-~ 171 (493)
+.+.+...+...++.+.+.+.|++.+++.+...++....+.|.. |+++|++++|+.+...++|..+++.+.+... +
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~---~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWW---SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhc---CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 77766654322234556778899999988887777788888877 4588999999999999999999888777544 4
Q ss_pred cccHHHHHHHHHHHHHHHHH-HhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhh
Q 011112 172 NIEIDRIFLLFTVLPAIQLL-SCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQ 250 (493)
Q Consensus 172 ~~gw~~~f~~~~~~~~l~~i-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
+.+||+.|++.+++.++..+ ..+++||++++.+.++ .++.+ + +. .++.. ++ .+.+
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~---~-~~--~~~~~---~~------~~~~----- 236 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP----IEEYR---N-DY--PDDYN---EK------AEQE----- 236 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC----chhcc---c-cc--ccccc---cc------cccc-----
Confidence 57999999998877766554 3455677654321000 00000 0 00 00000 00 0000
Q ss_pred hhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 251 KKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
. +.++... ...+|+|.++...+..++.+..........+.|.++..|+|+.+.+
T Consensus 237 --~----------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 290 (438)
T TIGR00712 237 --L----------------------TAKEIFM--QYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSS 290 (438)
T ss_pred --c----------------------chHHHHH--HHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHH
Confidence 0 1122111 1356788877665443332222222223345666666899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHH--HhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhH
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSI--LSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKF 408 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~--~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 408 (493)
+......++.+++.++.+++.||+++++....+.....+ ........... ...+... ...+ ..+....
T Consensus 291 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~--~~g~~~~ 360 (438)
T TIGR00712 291 WAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPA-------GNPLVDM-ICMI--VIGFLIY 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCC-------CchHHHH-HHHH--HHHHHHc
Confidence 887778888899999999999998543322222211111 11111111000 0111000 0001 1111111
Q ss_pred hHH---HHHHhhcCCCCchHHHHHHHHHHHhhhh-hhhHhHHHHhHHhhcC
Q 011112 409 MPF---LILSGQLCPPGIEGTLFALFMSISNFGS-TVGSFFGAGLASSLSI 455 (493)
Q Consensus 409 ~~~---~~~~~~~~p~~~~gt~~gl~~~~~~lg~-~~~~~i~g~l~~~~g~ 455 (493)
.+. .....+.+|++.+|+++|++++..++++ .++|.+.|.+.|..|+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~ 411 (438)
T TIGR00712 361 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 411 (438)
T ss_pred cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccc
Confidence 121 2356788999999999999999998875 6799999999998764
No 50
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.94 E-value=6.8e-24 Score=217.69 Aligned_cols=374 Identities=13% Similarity=0.085 Sum_probs=226.8
Q ss_pred hchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHH-HhhHhhhhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVA-FFPWSIKPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~-~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.+... +.+..|+.++. ++....+++++++++|.|.+++|...+.. ..++.+++++|..+||+ .+||.+++.
T Consensus 13 ~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~----g~r~~~~~~ 87 (393)
T PRK15011 13 FDLTSTA-FLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKR----GDRKSLIVF 87 (393)
T ss_pred ccchhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cchhHHHHH
Confidence 4444444 55667777776 46677788888999999999999987655 44666777665559995 245555666
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHH-HHHHHhhhhhHHHHHHHHHHHHhhhhchhcc--hhHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVL-LTAQNLGSAMADVVVDAMIAEAAKSERAAFA--GDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~~~~~~~~~~~ali~~~~~~~~~~~r--g~~~g~~~~~~~~G~~lg 162 (493)
+.++..+...++++.+ +++.+++. +++.+++ +...+..++++.|..++ ++| +...+......++|.++|
T Consensus 88 ~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lg~~~g 159 (393)
T PRK15011 88 CCLLGVLACTLFAWNR----NYFVLLFVGVFLSSFG-STANPQMFALAREHADK---TGREAVMFSSFLRAQVSLAWVIG 159 (393)
T ss_pred HHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhh---ccchHHHHHHHHHHHHHHHHHHh
Confidence 6665555555555543 45554444 4444444 45566777777775532 223 345578888999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhh
Q 011112 163 SLLGGYALTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTK 241 (493)
Q Consensus 163 ~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (493)
|.+++++.+++|||+.|+..+++.++..+.+ +++||.+++++. . + + + .
T Consensus 160 ~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~-~-----------~-----~------- 208 (393)
T PRK15011 160 PPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPL-A------T-G-----------T-----L------- 208 (393)
T ss_pred hHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcc-c------c-c-----------c-----c-------
Confidence 9999999999999999999887766665543 457776432210 0 0 0 0 0
Q ss_pred hhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeecc
Q 011112 242 KRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEI 321 (493)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (493)
+ ..++ +.+..+......++............+.|.++.
T Consensus 209 -----------~----------------------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 246 (393)
T PRK15011 209 -----------E----------------------APRR---------NRRDTLLLFVICTLMWGTNSLYIINMPLFIINE 246 (393)
T ss_pred -----------c----------------------cccc---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 000111111111111111111112234566667
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHH
Q 011112 322 LNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVD 401 (493)
Q Consensus 322 ~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 401 (493)
+|+++.+.|.+.....+..+++.++.+++.||+++|+.+..+.+...+. +...... ++....+....+..
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~l~~~~l~~ 316 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCF-YAGMLMA---------HSPAILLGLQLLNA 316 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH-HHHHHHH---------hhHHHHHHHHHHHH
Confidence 8999988888766666777888999999999999999877654443332 1111111 11111111111122
Q ss_pred HHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh
Q 011112 402 AVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (493)
...+........+..|..|+ ++|+++++++...++|..+++.++|.+.+.+|+ ...+.+...+.++.++..
T Consensus 317 ~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~--------~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNY--------HAVFWFALVMIIATLFCL 387 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHHHHHH
Confidence 22222222234556777775 599999999999999999999999999997653 234445556666666666
Q ss_pred hcccC
Q 011112 482 FLIPK 486 (493)
Q Consensus 482 ~~l~~ 486 (493)
.++||
T Consensus 388 ~~~~~ 392 (393)
T PRK15011 388 LRIKD 392 (393)
T ss_pred HhhcC
Confidence 66665
No 51
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=4.5e-24 Score=219.15 Aligned_cols=349 Identities=14% Similarity=0.153 Sum_probs=230.5
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
.+++....++..+. +.....+++++++++|.|..++|+..+.+.+...+ +|++|.++||+ +||+.++.+.+..
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----g~k~~~~~~~~~~ 83 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-----DKKRYMLLAITAF 83 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CcchhHHHHHHHH
Confidence 34455666666654 45566677888889999999999999988877765 89999999995 5677888888877
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
.++.+.+.+.+ +++.+++.|.+.+.+.+...+..++...|..+ +++|+++.|+.....++|..+||.+++++.
T Consensus 84 ~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 84 ASGFIAIPLVN----NVTLVVLFFALINCAYSVFSTVLKAWFADNLS---STSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766654 45566667777776666666777888888774 588999999999999999999999999988
Q ss_pred ccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhh
Q 011112 171 TNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKN 249 (493)
Q Consensus 171 ~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
+ .+|+.+|++.+++.++..+.. +++||++++++. + + +
T Consensus 157 ~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~--------~-------------------~----------~---- 194 (395)
T PRK10054 157 M-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT--------E-------------------T----------G---- 194 (395)
T ss_pred H-hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc--------c-------------------h----------h----
Confidence 5 699999998876665554433 345554322200 0 0 0
Q ss_pred hhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeee--ccCCCCHH
Q 011112 250 QKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQT--EILNLEAS 327 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~g~s~~ 327 (493)
. . + +..+.+|+|+++...+..++............+.|.. ++.+.+..
T Consensus 195 ---~----------------------~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (395)
T PRK10054 195 ---S----------------------V-W----SPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEK 244 (395)
T ss_pred ---h----------------------h-h----hhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHH
Confidence 0 0 0 1134467787766554433322221111111122222 23456666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhh
Q 011112 328 FLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFK 407 (493)
Q Consensus 328 ~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 407 (493)
..+.......+..+......+++.||.++|+.+..+.++..+..... .... ++.+.++. .......+...
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~--------~~~~~~~~-~~~~~~~g~~~ 314 (395)
T PRK10054 245 VVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGF-IFSG--------NSLLLWGM-SAAVFTVGEII 314 (395)
T ss_pred HHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHH-HHcc--------hHHHHHHH-HHHHHHHHHHH
Confidence 67777666666666666778899999999998887766655543221 1110 11111111 12222223333
Q ss_pred HhHH-HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 408 FMPF-LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 408 ~~~~-~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
..|. .+++.+..|++.++++++..+ ...+|..+||.++|.+.|++|..
T Consensus 315 ~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~ 363 (395)
T PRK10054 315 YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPW 363 (395)
T ss_pred HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChh
Confidence 3444 467889999999999998754 67789999999999999987653
No 52
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=3.4e-24 Score=226.93 Aligned_cols=426 Identities=15% Similarity=0.105 Sum_probs=244.8
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhh-----CCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCch
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKL-----KFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRI 80 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~-----g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr 80 (493)
+++....++.+..+.++++. ...... +.+.+++ +.+..+.+++.+...++..+ ++++|+++||+ +||
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-----Grr 86 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVT-KMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-----GRK 86 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----ccH
Confidence 34444445566668888875 444443 3445432 34566778888888888877 78999999995 688
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchh--hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHH
Q 011112 81 PYLVISTVLSLVPWLILGLNAFFRS--STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFG 158 (493)
Q Consensus 81 ~~ii~~~~l~~~~~~~~~~~~~~~~--~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G 158 (493)
+.+..+.++..++..++++.++... +++.+++.|+++|++.+...+....++.|.+ |+++||++.++......+|
T Consensus 87 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~---p~~~Rg~~~~~~~~~~~~g 163 (502)
T TIGR00887 87 RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFA---TKKWRGAMMAAVFAMQGFG 163 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc---ChhhHHHHHHHHHHHHHHH
Confidence 8888888888888777776543111 2567899999999999999999999999998 4699999999999999999
Q ss_pred HHHHHHHHHHhhc-----------------------cccHHHHHHHHHHHHHHHHHHhhccccccccchh--hhc--cc-
Q 011112 159 GICGSLLGGYALT-----------------------NIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKV--LKE--FS- 210 (493)
Q Consensus 159 ~~lg~~i~g~l~~-----------------------~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~--~~~--~~- 210 (493)
.++|+.++..+.. ..+||++|.+.++..++..+..+++||+|++... +++ +.
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~ 243 (502)
T TIGR00887 164 ILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAAS 243 (502)
T ss_pred HHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHH
Confidence 9999988876532 2379999988776665555566789999886421 111 00
Q ss_pred ccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcc
Q 011112 211 SSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQ 290 (493)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (493)
.+++.+. ++.+. ..++.... ++ . .+ ..+..++++++...+
T Consensus 244 ~~~~~~~-~~~~~-~~~~~~~~-~~------~-~~------------------------------~~~~~~~~l~~~~~~ 283 (502)
T TIGR00887 244 DMSAVLQ-VKIEA-EPDEVEKA-ST------A-VE------------------------------VPKASWSDFFTHFFK 283 (502)
T ss_pred HHHHHhc-ccccc-Ccccccch-hc------c-cc------------------------------chhhhHHHHHHHHhh
Confidence 0000000 00000 00000000 00 0 00 000111122111111
Q ss_pred cchHHH----HHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH-----------H-HHHHHHHHHHHHHHHHHHHHhcC
Q 011112 291 PEILRP----MAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG-----------T-ARVVGWVGLMLGTYTYNGYLKRL 354 (493)
Q Consensus 291 ~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g-----------l-~~~~~~~~~~l~~~~~~~~~~~~ 354 (493)
++.++. ....+.............+.+.+ ..|++..+.+ . ...+..++.+++.++.+++.||.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~ 362 (502)
T TIGR00887 284 WRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII 362 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 111111 11111111111111111233332 3566543211 1 12334556677888899999999
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhH-HHHHHhhcCCCCchHHHHHHHHH
Q 011112 355 KLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMP-FLILSGQLCPPGIEGTLFALFMS 433 (493)
Q Consensus 355 ~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~gt~~gl~~~ 433 (493)
|+|+.+..+..+..+...+........ +... .+....+..........+ ...+..|..|++.|++++|+.++
T Consensus 363 gRR~~l~~~~~~~~~~~~~l~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~ 435 (502)
T TIGR00887 363 GRKPIQLMGFFILTVLFFVLGFAYNHL------STHG-FLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAA 435 (502)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhc------chhH-HHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHH
Confidence 999998887766655432221111100 1111 011111111111122222 24567999999999999999999
Q ss_pred HHhhhhhhhHhHHHHhHHhhcCCCCCc--cchHHHHHHHHhhhhhhhhhhhcccCCCCC
Q 011112 434 ISNFGSTVGSFFGAGLASSLSISSGSF--DNLLLGISIQALCTFIPIAFLFLIPKGATG 490 (493)
Q Consensus 434 ~~~lg~~~~~~i~g~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 490 (493)
++++++.+++.+.+.+.+.-+...+.+ .++...+.+.++++++..++..++||++++
T Consensus 436 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 436 SGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred HhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 999999999999998887432110000 012223444555555555555678987764
No 53
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=1.4e-23 Score=215.23 Aligned_cols=352 Identities=16% Similarity=0.170 Sum_probs=227.2
Q ss_pred chhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
.++.++++...++...+......+..|.+.+++|.|+.+.++..+.+.+++.+ ++++|+++||+ +||+.++.+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----grr~~~~~~~ 80 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-----GRRPVILVGM 80 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-----CChHHHHHHH
Confidence 34444444555555444432333344555778999999999999999999987 79999999995 5777888888
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011112 88 VLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g 167 (493)
++..++.+.+...+ +++.+++.|++.+++.+...+..+.+..|..+ .++|+++.+....+..+|..+||.+++
T Consensus 81 ~~~~~~~~~~~~~~----~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~i~~ 153 (394)
T PRK11652 81 SIFILGTLVALFAH----SLTVLIAASAIQGLGTGVGGVMARTLPRDLYE---GTQLRHANSLLNMGILVSPLLAPLIGG 153 (394)
T ss_pred HHHHHHHHHHHHHc----cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777766654 56778899999999988877778888888764 478899999999999999999999999
Q ss_pred HhhccccHHHHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhh
Q 011112 168 YALTNIEIDRIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKN 246 (493)
Q Consensus 168 ~l~~~~gw~~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (493)
.+.++.|||+.|++.+++.++..+. .++.||+++.+++ +
T Consensus 154 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~------------ 193 (394)
T PRK11652 154 LLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADAR----------------------------R------------ 193 (394)
T ss_pred HHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccc----------------------------h------------
Confidence 9999899999999887666555433 3456765432210 0
Q ss_pred hhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCH
Q 011112 247 KKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEA 326 (493)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~ 326 (493)
. +.+ ++++..+|+|+.+...+..+.............+.+..+.+|+++
T Consensus 194 ------~----------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 242 (394)
T PRK11652 194 ------T----------------------RVL---ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSS 242 (394)
T ss_pred ------h----------------------HHH---HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCH
Confidence 0 001 123344566665543332222111111111122345556689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHh
Q 011112 327 SFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQF 406 (493)
Q Consensus 327 ~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 406 (493)
.+.|+......++.++++.+.+|+.||.+++.. .......+....... .... .....+.......+.....+.
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~g~~~ 315 (394)
T PRK11652 243 MTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW--QSVICCLLAGLLMWI--PGWF---GVMNVWTLLVPAALFFFGAGM 315 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH--HHHh---ccccHHHHHHHHHHHHHHHHH
Confidence 999998888888999999999999998873222 222222211111111 0000 001111111111222222333
Q ss_pred hHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 407 KFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 407 ~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
.....+++..+..| +.+|+..++.+...++|..+++.+++.+.+
T Consensus 316 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 316 LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 33344566777776 578999999999999999888888776654
No 54
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.93 E-value=3.7e-25 Score=222.18 Aligned_cols=347 Identities=23% Similarity=0.326 Sum_probs=232.5
Q ss_pred HHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHH
Q 011112 17 CLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPW 94 (493)
Q Consensus 17 ~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~ 94 (493)
.+.+++..+.. .....++.++.+++|.|.+++++..+++.++..+ ++++|+++||+ +||+.++.+.++.+++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~l~~~~~~~~~~~ 76 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-----GRRRVLIIGLLLFALGS 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS------HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCeeeEeehhhhhhhHH
Confidence 35566666654 5445544377889999999999999999988876 89999999995 57778889988888885
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 011112 95 LILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE 174 (493)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g 174 (493)
+.+.+++ +.+.+++.|++.|++.+...+..++++.|..+ +++|++++++......+|.++|+.+++.+.++.+
T Consensus 77 ~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 77 LLLAFAS----NFWLLLIARFLLGIGSGFFSPASNALIADWFP---PEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---TCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred HHhhhhh----hHHHHhhhccccccccccccccccccccccch---hhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 5555433 34578999999999999999999999999885 4899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhh
Q 011112 175 IDRIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKR 253 (493)
Q Consensus 175 w~~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (493)
||+.|++.+++.++..++ .++.++++++++.+. +++ +.. + .++
T Consensus 150 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~------~~~-----------~~~---~--------~~~-------- 193 (352)
T PF07690_consen 150 WRWAFLISAILSLIAAILFILFLPEPPPPRERES------PKE-----------SES---K--------KPK-------- 193 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHCCC---STTTT--S------STT-----------TT-------------HHH--------
T ss_pred cccccccccchhhhhhhhHhhhhhhccccccccc------ccc-----------ccc---c--------ccc--------
Confidence 999999999887777653 244554443331100 000 000 0 000
Q ss_pred hhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCC-HHHHHHH
Q 011112 254 MFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLE-ASFLGTA 332 (493)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s-~~~~gl~ 332 (493)
+.++ .+....++|.+|......++............+.|..+.+|++ ..+.+..
T Consensus 194 ----------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (352)
T PF07690_consen 194 ----------------------PLKP---GFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLL 248 (352)
T ss_dssp ----------------------CCCH----CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHH
T ss_pred ----------------------cccc---ccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHH
Confidence 0111 0122234454442222222211122222333455666778999 7888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHH
Q 011112 333 RVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFL 412 (493)
Q Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~ 412 (493)
..+..+..+++.++.+++.||.++|+..........+..+........ .+..+.+. ...+.....+.......
T Consensus 249 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~g~~~~~~~~~~~ 321 (352)
T PF07690_consen 249 FSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS------SSPVWLII-ALFLIGFGFGIVFPILF 321 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH------CHHHHHHH-HHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh------hhHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 888888888889999999999998777766666555543221111100 00111111 22233333344444557
Q ss_pred HHHhhcCCCCchHHHHHHHHHHHhhhhhhhH
Q 011112 413 ILSGQLCPPGIEGTLFALFMSISNFGSTVGS 443 (493)
Q Consensus 413 ~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~ 443 (493)
+++.+..|++++|+.+|+.++..+++..+||
T Consensus 322 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 322 SLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 8899999999999999999999999998886
No 55
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=2.3e-23 Score=217.30 Aligned_cols=348 Identities=16% Similarity=0.136 Sum_probs=227.4
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccc--h
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFF--R 104 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~--~ 104 (493)
.....+++++++++|+|+.++|...++..+..++ +|+.|.++||.+.|+.|||+|++.+.+...++..++...|+. .
T Consensus 27 ~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~ 106 (444)
T PRK09669 27 TVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGAT 106 (444)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcc
Confidence 4566778889999999999999999888877776 899999999999887788999999988877776655555431 1
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------cccHHH
Q 011112 105 SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT-------NIEIDR 177 (493)
Q Consensus 105 ~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~-------~~gw~~ 177 (493)
.....+.+...+...+.+...+++.++.+|+++ +++||++..++.....++|..+++.+...+.. ..+|+.
T Consensus 107 ~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~--~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~ 184 (444)
T PRK09669 107 GKIIYACVTYILLSLVYTAINVPYCAMPGAITN--DPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY 184 (444)
T ss_pred hHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 123344555556677777888899999999886 45889999999999888988888766554432 347888
Q ss_pred HHHHHHHHHHHHHHHhh-ccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhh
Q 011112 178 IFLLFTVLPAIQLLSCG-LVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFK 256 (493)
Q Consensus 178 ~f~~~~~~~~l~~i~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
.+.+.+++..+..+.++ ..+|++++++ + + + .
T Consensus 185 ~~~i~~ii~~v~~~~~~~~~~e~~~~~~---------~-------------------~----------~-------~--- 216 (444)
T PRK09669 185 AMMVMGLLGVVLFFCCFFMTKERYTPEV---------D-------------------N----------S-------S--- 216 (444)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEecCCCC---------c-------------------C----------C-------C---
Confidence 88877776665554443 3455422110 0 0 0 0
Q ss_pred hhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHH
Q 011112 257 IRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVG 336 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~ 336 (493)
+.++ +++..+|||.++..+...++.............+|.+..++. ++..+.....+
T Consensus 217 -------------------~~~~---~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~ 273 (444)
T PRK09669 217 -------------------SVWK---DLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTG 273 (444)
T ss_pred -------------------CHHH---HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHH
Confidence 1122 344557888877655443332222222222334454444443 33344445566
Q ss_pred HHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHh
Q 011112 337 WVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSG 416 (493)
Q Consensus 337 ~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 416 (493)
.+..+++.++++++.||+|+|+.+..+.++..+..+. ..+.. ..+.+.......+.............++++
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSAL-IFFIP-------PSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHHhC-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888889999999999999988776655443221 11111 011111111112222222222222345666
Q ss_pred hcC-------CCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 417 QLC-------PPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 417 ~~~-------p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
+.+ .++.+|..+|.+++..++|..+|+.++|.+.+..|+.
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 655 3566889999999999999999999999999999985
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=1.3e-23 Score=216.07 Aligned_cols=372 Identities=16% Similarity=0.214 Sum_probs=235.4
Q ss_pred hchhHHH-HHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhh-----HHHHHHHHHhhHhh-hhhhhhcccccccCCCCc
Q 011112 8 FGVSFLW-LICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSA-----SQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKR 79 (493)
Q Consensus 8 ~~~~~~~-~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~-----~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~r 79 (493)
.+|+... .+.+..++.++.. +....++.++ +++|.+..+ .|+..++..++..+ +|++|+++||+ +|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~ 83 (408)
T PRK09874 10 INWKRNLTVAWLGCFLTGAAFSLVMPFLPLYV-EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-----GR 83 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----Cc
Confidence 3444433 3445567777764 5555566665 569998665 37777788887776 89999999995 56
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHH
Q 011112 80 IPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGG 159 (493)
Q Consensus 80 r~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~ 159 (493)
|+.++.+.++..++..++...+ +++.+++.|++.+++.+.. +..++++.|.. |+++|+++.++......+|.
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~ 155 (408)
T PRK09874 84 KIMLLRSALGMGIVMVLMGLAQ----NIWQFLILRALLGLLGGFV-PNANALIATQV---PRNKSGWALGTLSTGGVSGA 155 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHhhhhH-HhHHHHHHHhc---CHhhhhHHHHHHHHHHHHHH
Confidence 7788888888777777666553 5677888999998876554 55667777776 45889999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhh
Q 011112 160 ICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNI 238 (493)
Q Consensus 160 ~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (493)
.+++.+++.+.++.+||+.|++.+++.++..+.. ++.||++++.++ + +
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-----------------~---- 204 (408)
T PRK09874 156 LLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSK----------K-----------------E---- 204 (408)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccc----------h-----------------h----
Confidence 9999999999999999999998887666555433 445654322210 0 0
Q ss_pred hhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHH-HHHHHhcccCCCcceeee
Q 011112 239 STKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAW-FFLAHVAVPNLSTVMFYY 317 (493)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~ 317 (493)
+ . +.+ +..+.+++|+.+..... .++............+.|
T Consensus 205 ------~-------~----------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T PRK09874 205 ------M-------L----------------------HMR----EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLY 245 (408)
T ss_pred ------h-------h----------------------HHH----HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 111 22334566665443221 111111111112222334
Q ss_pred eeccCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEee
Q 011112 318 QTEILNLEAS---FLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVL 394 (493)
Q Consensus 318 ~~~~~g~s~~---~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l 394 (493)
..+..+...+ ..+.+..+..++.+++.+..+++.||.++|+.+..+..+..+..+. .... ++.+.+.
T Consensus 246 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~ 315 (408)
T PRK09874 246 VRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIP-MSFV---------QTPLQLG 315 (408)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-HHHh---------ccHHHHH
Confidence 3332222211 2344445566777888888999999999999888776665443221 1111 1111111
Q ss_pred ehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhh
Q 011112 395 YGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCT 474 (493)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 474 (493)
....+.....+.......+.+.+..|++.+|+.+++++++.++|..+||.++|.+.+.+|+. ..+.+.+++.
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~--------~~f~~~~~~~ 387 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFR--------AVFLVTAGVV 387 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchh--------HHHHHHHHHH
Confidence 11122223333333334566778889999999999999999999999999999999876642 3444445545
Q ss_pred hhhhhhh
Q 011112 475 FIPIAFL 481 (493)
Q Consensus 475 ~~~~~~~ 481 (493)
+++.++.
T Consensus 388 l~~~~~~ 394 (408)
T PRK09874 388 LFNAVYS 394 (408)
T ss_pred HHHHHHH
Confidence 5544443
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.93 E-value=4.9e-23 Score=211.11 Aligned_cols=351 Identities=15% Similarity=0.123 Sum_probs=224.9
Q ss_pred HHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHH
Q 011112 33 VSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLI 111 (493)
Q Consensus 33 ~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~ 111 (493)
..|.+.+++|.|..+.++..+++.++..+ +|+.|+++||+ +||+.++.+.++..++...+...+ +.+.++
T Consensus 25 ~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----g~r~~l~~~~~~~~i~~~~~~~~~----~~~~~~ 95 (392)
T PRK10473 25 GLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-----GRKPVAIPGAALFIIASLLCSLAE----TSSLFL 95 (392)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-----CChHHHHHHHHHHHHHHHHHHHhC----cHHHHH
Confidence 34555778999999999999999988877 79999999995 577888888888888887777654 456678
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Q 011112 112 VLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLL 191 (493)
Q Consensus 112 ~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i 191 (493)
+.|++++++.+...+...+++.|..+ +++|+++.++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+
T Consensus 96 ~~~~l~g~~~~~~~~~~~~~i~~~~~---~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~ 172 (392)
T PRK10473 96 AGRFLQGIGAGCCYVVAFAILRDTLD---DRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLL 172 (392)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHH
Confidence 89999999998888888899999874 589999999999999999999999999998888999999998877666655
Q ss_pred Hh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchh
Q 011112 192 SC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLV 270 (493)
Q Consensus 192 ~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (493)
.. ++.||++++.+ + + ++ +
T Consensus 173 ~~~~~~~~~~~~~~---------~-~-----------------~~--------~-------------------------- 191 (392)
T PRK10473 173 LSLFILKETRPARA---------P-A-----------------AS--------S-------------------------- 191 (392)
T ss_pred HHHHHcCCCCCccc---------C-C-----------------cc--------c--------------------------
Confidence 43 45666543210 0 0 00 0
Q ss_pred HHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011112 271 IQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGY 350 (493)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~ 350 (493)
..+ +.++.+++|+.+...+...+............+++..+++|+++.+.+.......++.+++.++.+++
T Consensus 192 -----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l 262 (392)
T PRK10473 192 -----KPR----ENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFA 262 (392)
T ss_pred -----hHH----HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 11223455554432222111111111111122445556689999999988888888899999999999
Q ss_pred HhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHH
Q 011112 351 LKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFAL 430 (493)
Q Consensus 351 ~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl 430 (493)
.||+++|+.+..+.++..++.+. +.... ......+...... . ++..........+..|.+.++ +.
T Consensus 263 ~~r~g~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~l~~-~--g~~~~~~~~~~~~~~~~~~~~---g~ 327 (392)
T PRK10473 263 LGIFKPRTLMLTSQVLFLAAGIT-LALSP--------SHAVSLFGITLIC-A--GFSVGFGVAMSQALGPFSLRA---GV 327 (392)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHH-HHHHH--------HHHHHHHHHHHHH-H--HHHHHhHHHHHHHhccCcccc---cH
Confidence 99999999888877666554322 11111 0011111111111 1 111111112333444543332 33
Q ss_pred HHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhccc
Q 011112 431 FMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIP 485 (493)
Q Consensus 431 ~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (493)
.++...++..+++.+++.+.+.+|+.. ......+...+.++.+++..+.|
T Consensus 328 ~~~~~~~~~~~g~~~~~~l~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 377 (392)
T PRK10473 328 ASSTLGIAQVCGSSLWIWLAAVLGISA-----WNMLIGILIACSIVSLLLILFVA 377 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccch-----hHHHHHHHHHHHHHHHHHHHhcC
Confidence 445566778888889999998887531 12233333444444444444455
No 58
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.93 E-value=2.9e-23 Score=212.07 Aligned_cols=340 Identities=15% Similarity=0.120 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
++.+....++.++. ++.+..++++ .+++|.|.+++|+..+.+.++..+ +|++|+++||+ +||+.+..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-----g~k~~~~~~~~~~ 81 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLW-LAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-----GFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-----HHHHHHHHHHHHH
Confidence 44455666666665 4666666666 557999999999999999999887 79999999995 6778888888888
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
.++...+++.+ +++.+++.|+++|++.+...+..++.+.+..+ +++|+++++.+....++|..+|+.+++.+.
T Consensus 82 ~~~~~~~~~~~----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 82 AAGCAGLGLMV----GFWSWLAWRFVAGIGCAMIWVVVESALMCSGT---SRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88887777764 57788899999999998887777777777763 478999999999999999999999999987
Q ss_pred ccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhh
Q 011112 171 TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQ 250 (493)
Q Consensus 171 ~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
+...|+.. +..+..... .+..++.++++++.+ + + + +
T Consensus 155 ~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~-----------------~----------~----- 190 (381)
T PRK03633 155 TELMSVLP-WVTGLVLAA-ILPLLFTRILNQQAE---------N-H-----------------D----------S----- 190 (381)
T ss_pred ccccchHH-HHHHHHHHH-HHHHHHhcccCCCCC---------C-C-----------------C----------C-----
Confidence 75433322 222211111 111122222111110 0 0 0 0
Q ss_pred hhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 251 KKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
. +.+ +.+|+|.++......+.............+.|.++ .|.++.+.|
T Consensus 191 --~----------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g 238 (381)
T PRK03633 191 --T----------------------SIW-------PMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIG 238 (381)
T ss_pred --C----------------------CHH-------HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHH
Confidence 0 111 12344544432211111111111111223445544 699998889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhH
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMP 410 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~ 410 (493)
.......++.+++....+++.||+++|+.+..+..+..++.... . .. . ..+. ...+... ......|
T Consensus 239 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~-~~-------~--~~~~-~~~l~g~-~~~~~~p 304 (381)
T PRK03633 239 FWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--L-SQ-------A--AMAP-ALFILGA-AGFTLYP 304 (381)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--h-hh-------H--HHHH-HHHHHHH-HHHhHHH
Confidence 88777888889999999999999999998887766665543211 1 10 0 0000 1111111 1222334
Q ss_pred -HHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 411 -FLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 411 -~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.++.+.+..|+++++...+.++...++|..+||.++|.+.|++|+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~ 350 (381)
T PRK03633 305 VAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD 350 (381)
T ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 356778889988888888888888999999999999999998764
No 59
>PRK11043 putative transporter; Provisional
Probab=99.93 E-value=4.9e-23 Score=211.76 Aligned_cols=327 Identities=17% Similarity=0.139 Sum_probs=216.3
Q ss_pred HHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHH
Q 011112 34 SYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIV 112 (493)
Q Consensus 34 ~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 112 (493)
.+.+++++|.|++++|+..+++.++..+ ++++|+++||+ +||+.++.+..+..++.+.+.+.+ +++.+++
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~ 99 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-----GRKPVLLAGLSLFALGSLGMLWVE----SAAQLLV 99 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-----CCcHHHHHHHHHHHHHHHHHHHhc----CHHHHHH
Confidence 3445778999999999999999999887 79999999995 677788888888888777777654 5677888
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 011112 113 LLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLS 192 (493)
Q Consensus 113 ~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~ 192 (493)
.|+++|++.+...+..++++.|..+ ++++++..+.......+|..+++.+++++.++.+||+.|++.+++.++..+.
T Consensus 100 ~~~l~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 100 LRFVQAVGVCSAAVIWQALVIDRYP---AQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 9999999988888888888888774 4778888999888899999999999999999999999999888776665555
Q ss_pred hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHH
Q 011112 193 CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQ 272 (493)
Q Consensus 193 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (493)
.++.+|+++++++ +
T Consensus 177 ~~~~~~~~~~~~~----------------------------~-------------------------------------- 190 (401)
T PRK11043 177 TLRLKPSKKARKQ----------------------------S-------------------------------------- 190 (401)
T ss_pred HHHcCCCCCcccc----------------------------c--------------------------------------
Confidence 4445544321100 0
Q ss_pred HHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 273 WFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLK 352 (493)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~ 352 (493)
+.+ .+.++.+|+|+.+...+...+............+++.+ +.|+++.+.|+......++.++++...+++.|
T Consensus 191 ---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~ 263 (401)
T PRK11043 191 ---QDA---LTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQ 263 (401)
T ss_pred ---hHH---HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01233455665543222211111111111112344443 47999999998877778888999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHH
Q 011112 353 RLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFM 432 (493)
Q Consensus 353 ~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~ 432 (493)
|.++|+.+....+...+..+....... .. .+.....+....+.....+..+...++...+..| +++|++.|+++
T Consensus 264 r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~ 337 (401)
T PRK11043 264 KWGGEQLLPWLLVLFAVSVIAIWLASL-LS----HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQN 337 (401)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHH-hc----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHH
Confidence 999888766555444433221111110 00 0111111111111122222222223444555555 57999999999
Q ss_pred HHHhhhhhhhHhHHHHhHH
Q 011112 433 SISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 433 ~~~~lg~~~~~~i~g~l~~ 451 (493)
+.+..+...++.+.|.+.+
T Consensus 338 ~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 338 TLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHccC
Confidence 9988888888888777765
No 60
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3e-23 Score=210.57 Aligned_cols=395 Identities=17% Similarity=0.199 Sum_probs=273.8
Q ss_pred hhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
+.+.+-.+.-.+.-+..++. .+....+..++++.+|+++..+|.+..+.-+--++ +|++|.++||++.|+.|||||++
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL 87 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLL 87 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHH
Confidence 34444444334444555554 36677788889999999999999887777666666 89999999999988889999999
Q ss_pred HHHHHHHHHHHHHhhcccch--hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFR--SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~--~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
.+.+..++...++..+++.+ .+.....+..++.++++....+++.++.+++++ +++||.+..++.+...++|..+.
T Consensus 88 ~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~--d~~ER~~l~s~R~~~~~~g~~l~ 165 (467)
T COG2211 88 WGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ--DPQERASLTSWRMVFASLGGLLV 165 (467)
T ss_pred HHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC--CHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888777532 344455677778899999999999999999997 47999999999999999998877
Q ss_pred HHHHHHhhc-------cccHHHHHHHHHHHHHHHHHHhhc-cccccccchhhhcccccCCCcccCCCCcccCCCCCcccc
Q 011112 163 SLLGGYALT-------NIEIDRIFLLFTVLPAIQLLSCGL-VKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEE 234 (493)
Q Consensus 163 ~~i~g~l~~-------~~gw~~~f~~~~~~~~l~~i~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (493)
..+...+.. ..||+..-.+.++++.+..+.+++ .+|+..+.+. + +
T Consensus 166 ~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~--------~-------------------~ 218 (467)
T COG2211 166 AVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQP--------T-------------------K 218 (467)
T ss_pred HHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCcccc--------C-------------------c
Confidence 777665553 357888877777777777766654 6665532210 0 0
Q ss_pred chhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcce
Q 011112 235 KYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVM 314 (493)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 314 (493)
+ +.+ . ++++ ++...+|||.+...++..++........++..
T Consensus 219 ~-------~~~-------~----------------------~~~~---~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~ 259 (467)
T COG2211 219 T-------GVK-------L----------------------KLKD---SFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIM 259 (467)
T ss_pred c-------ccc-------c----------------------cHHH---HHHHHHccchHHHHHHHHHHHHHHHHHHhhhh
Confidence 0 000 0 2232 23446788887766554444444444455566
Q ss_pred eeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEee
Q 011112 315 FYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVL 394 (493)
Q Consensus 315 ~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l 394 (493)
.||.+..+|.++.+..........+.+++.+++.++.+|+|+|+++.++.++..++.+... +.. ..+..+++
T Consensus 260 ~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~-f~~-------~~~~~l~~ 331 (467)
T COG2211 260 VYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY-FTP-------AGSVVLIV 331 (467)
T ss_pred heeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH-hhc-------CcchHHHH
Confidence 7788888998888888887778888888899999999999999999999888887754332 211 11222222
Q ss_pred ehhHHHHHHHH------hhHhHHHHHHhhc-CCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCC-ccchHHH
Q 011112 395 YGSALVDAVNQ------FKFMPFLILSGQL-CPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGS-FDNLLLG 466 (493)
Q Consensus 395 ~~~~~~~~~~~------~~~~~~~~~~~~~-~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~-~~~~~~~ 466 (493)
....+.....+ ++++|.-.-..|. ...+.+|..+|.+.++.++|.+++..+.|++.+.+|+.+.. .|.....
T Consensus 332 ~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al 411 (467)
T COG2211 332 VALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNVSAQSASAL 411 (467)
T ss_pred HHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 22122211111 1222221112222 46789999999999999999999999999999999997644 3444444
Q ss_pred HHHHHhhhhhh
Q 011112 467 ISIQALCTFIP 477 (493)
Q Consensus 467 ~~~~~~~~~~~ 477 (493)
..+..+..++|
T Consensus 412 ~gI~~~~~~~P 422 (467)
T COG2211 412 FGIRFLFIILP 422 (467)
T ss_pred HHHHHHHHHHH
Confidence 44443333333
No 61
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=1.9e-23 Score=213.53 Aligned_cols=339 Identities=17% Similarity=0.081 Sum_probs=218.6
Q ss_pred HHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCc---hhHHHHHHHHHHHHH
Q 011112 20 YFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKR---IPYLVISTVLSLVPW 94 (493)
Q Consensus 20 ~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~r---r~~ii~~~~l~~~~~ 94 (493)
||...+. ++....++.+++ ++|.|..++|+..+++.++..+ +|++|+++||++ || ++.+...... ..
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g----~~~~~~~~~~~~~~~--~~- 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPS----QLIPALRLLALLTLL--FA- 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhc----chHHHHHHHHHHHHH--HH-
Confidence 4443343 455566666765 5899999999999999998877 899999999962 22 2232222111 11
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 011112 95 LILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE 174 (493)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g 174 (493)
..+.... ++++.+++.|++.+++.+...+..++++.+.. ++|+++.+......++|..+||.+++++.+++|
T Consensus 85 ~~~~~~~---~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~-----~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g 156 (382)
T PRK11128 85 VAFWFGA---HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ-----KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG 156 (382)
T ss_pred HHHHHhc---ccHHHHHHHHHHHHHHHcccccHHHHHHHHHH-----hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1122221 35777888999889887777777888877653 567888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhh
Q 011112 175 IDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRM 254 (493)
Q Consensus 175 w~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
||..|++.++..++..+..++.||++++.+ +++ + + +
T Consensus 157 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-----------~-----~----------~--------- 192 (382)
T PRK11128 157 EQAILWILTAGVASMLLGQLLRPTIMPQGE---------SRQ-----------Q-----E----------S--------- 192 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHccCCCCCccc---------ccc-----------c-----c----------c---------
Confidence 999998877544333333334454322110 000 0 0 0
Q ss_pred hhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHH
Q 011112 255 FKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARV 334 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~ 334 (493)
+.+ +.+.+.+|+|+++......++............+.|.. +.|+++.+.|....
T Consensus 193 ---------------------~~~---~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~ 247 (382)
T PRK11128 193 ---------------------AGW---PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWS 247 (382)
T ss_pred ---------------------ccc---chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHH
Confidence 000 12335567888876554444333222222222344543 48999999999877
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHH
Q 011112 335 VGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLIL 414 (493)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 414 (493)
.+.++.++...+.+|+.||++.|+.+..+.++..+..+. .... ++.+..+....+..++......+.+.+
T Consensus 248 ~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~l~g~~~~~~~~~~~~~ 317 (382)
T PRK11128 248 LGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGL-MGST---------TALPWLIVIQILHCGTFTVCHLAAMRY 317 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHhh---------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888899999999999999988887776654221 1111 222222222333344444444445566
Q ss_pred HhhcCCCCchHHHHHHHHHH-HhhhhhhhHhHHHHhHHhhc
Q 011112 415 SGQLCPPGIEGTLFALFMSI-SNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 415 ~~~~~p~~~~gt~~gl~~~~-~~lg~~~~~~i~g~l~~~~g 454 (493)
..+. +++++++.+++++.. ..+|..+|+.++|.+.|.+|
T Consensus 318 ~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 318 IAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred HHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6775 566678999988754 45677899999999999875
No 62
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=1.1e-23 Score=219.99 Aligned_cols=393 Identities=17% Similarity=0.134 Sum_probs=232.2
Q ss_pred HHHhHHH-hHHHHHHHHHHhhhCCC--------HhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 21 FTQGFRS-FVWTAVSYQLKDKLKFS--------PSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 21 f~~g~~~-~~~~~~~~~l~~~~g~s--------~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
++.+++. ...... +.+.++++.+ ..+.++..+++.++..+ +|++|+++||+ +||+.++.+.++.
T Consensus 38 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----grr~~~~~~~~~~ 111 (481)
T TIGR00879 38 LMFGYDTGVIGGAL-ALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-----GRKKSLLIIALLF 111 (481)
T ss_pred Hhcccccchhhhhh-hcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-----hhHHHHHHHHHHH
Confidence 4455554 443333 3445566766 88999999999999887 79999999995 6788888888888
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH---H
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG---G 167 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~---g 167 (493)
.++..++...+.. .+++.+++.|++.|++.+...+...+++.|..+ +++|++++++...+..+|..+++.++ +
T Consensus 112 ~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~ 187 (481)
T TIGR00879 112 VIGAILMGLAAFA-LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAP---KALRGALTSLYQLAITFGILVAYGFGSGKV 187 (481)
T ss_pred HHHHHHHHHhccc-cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCC---hhhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8887777554322 244578899999999999999999999999884 58999999999999999999999999 7
Q ss_pred HhhccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhh
Q 011112 168 YALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNK 247 (493)
Q Consensus 168 ~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (493)
...+..+||+.|++.++..++..+..+++||+++....+++....+ +..++.. ..++. .. +. .... ...+.
T Consensus 188 ~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~-~~-~~-~~~~-~~~~~- 258 (481)
T TIGR00879 188 SLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEAR--KSLARLR--GTSGE-DK-EL-LDEL-ELIDI- 258 (481)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHH--HHHHHHh--CCCCC-cH-HH-HHHH-HHHHH-
Confidence 7777889999999966555444445566788754321100000000 0000000 00000 00 00 0000 00000
Q ss_pred hhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcc--cc-hHHHHHHHHHHHhcccCCCcceeeeeeccCCC
Q 011112 248 KNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQ--PE-ILRPMAWFFLAHVAVPNLSTVMFYYQTEILNL 324 (493)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~ 324 (493)
. ++ .-.+..++..+++++..++ +. ++...+..+.............+++ .+..|+
T Consensus 259 -----~-----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~ 316 (481)
T TIGR00879 259 -----K-----RS-----------IEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTI-FENAGV 316 (481)
T ss_pred -----H-----HH-----------HHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHH-HHHcCC
Confidence 0 00 0000000011222222221 11 1111122221111111111111222 345789
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhh-eeccccccCccCceEeeehhHHHHHH
Q 011112 325 EASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVL-VSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 325 s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~-~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
+..+.+....+..++.+++.++.+++.||.++|+.+..+.++..+..+..... ....+. .........+....+....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 395 (481)
T TIGR00879 317 STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTG-SSKSSGNVAIVFILLFIAF 395 (481)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCC-cccchhHHHHHHHHHHHHH
Confidence 88778888888888888999999999999999998888766655543222110 100000 0000011111111111122
Q ss_pred HHhhHhHH-HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 404 NQFKFMPF-LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 404 ~~~~~~~~-~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.+....+. .+++.|..|++.|++++++.+...++|..+++.+.+.+.+..|+
T Consensus 396 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~ 448 (481)
T TIGR00879 396 FAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGV 448 (481)
T ss_pred HHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 22223333 45678999999999999999999999999999999999887654
No 63
>PRK15075 citrate-proton symporter; Provisional
Probab=99.93 E-value=1.9e-23 Score=217.31 Aligned_cols=366 Identities=12% Similarity=0.049 Sum_probs=222.7
Q ss_pred hhchhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHH-HHHHHh--hH---hh-hhhhhhcccccccCCCCc
Q 011112 7 VFGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFV-SAVAFF--PW---SI-KPLYGILSDCIPIKGRKR 79 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~-~s~~~l--~~---~~-~~~~G~lsDr~~~~g~~r 79 (493)
+-+++....+.+..|++.++........|.++++++.++++.+.. .+.... .+ .+ +++.|+++||+ +|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-----Gr 85 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-----GR 85 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-----ch
Confidence 344555556667778899886333444566788899988776543 232222 22 23 57889999995 67
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchh----hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHH
Q 011112 80 IPYLVISTVLSLVPWLILGLNAFFRS----STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAM 155 (493)
Q Consensus 80 r~~ii~~~~l~~~~~~~~~~~~~~~~----~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~ 155 (493)
|+.++.+.++..++.++++++++... ....+++.|+++|++.+...+...+++.|.. |+++|++++++.....
T Consensus 86 r~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~---p~~~rg~~~~~~~~~~ 162 (434)
T PRK15075 86 RKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA---TPGRKGFYTSWQSASQ 162 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC---CcccchHHHHHHHHHH
Confidence 88888999999999888888763211 0114678999999999888888889999988 4599999999999988
Q ss_pred HHHHHHHHHHHHHhh--------ccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCC
Q 011112 156 AFGGICGSLLGGYAL--------TNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDD 227 (493)
Q Consensus 156 ~~G~~lg~~i~g~l~--------~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (493)
++|..+|+.+++.+. +++|||++|++..+...+........||+++..+ +++
T Consensus 163 ~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~---------~~~----------- 222 (434)
T PRK15075 163 QVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLA---------RKH----------- 222 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHH---------hhh-----------
Confidence 888888888877663 4689999998754332111111112233221100 000
Q ss_pred CCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHH-HHHHHHHHhc
Q 011112 228 EDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRP-MAWFFLAHVA 306 (493)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~l~~~~ 306 (493)
+ + +.++.++ +..++++.+.. ....++....
T Consensus 223 ~-----~-----------------------------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 253 (434)
T PRK15075 223 R-----P-----------------------------------------SMREIFR---SLAANWRIVLAGMLMVAMTTVS 253 (434)
T ss_pred c-----c-----------------------------------------ccccHHH---HHHHhHHHHHHHHHHHHHHHHH
Confidence 0 0 0000000 11122222211 1111111111
Q ss_pred ccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccC
Q 011112 307 VPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVG 386 (493)
Q Consensus 307 ~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g 386 (493)
........+.|+++..|++..+.++...+..++.+++.++.+++.||+++|+.+..+.++..+...+...... .
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~----- 327 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV-A----- 327 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH-c-----
Confidence 1112222355666668999988888888888888999999999999999999887765544322111111110 0
Q ss_pred ccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhh-hhhhhHhHHHHhHHhhcC
Q 011112 387 ISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNF-GSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~l-g~~~~~~i~g~l~~~~g~ 455 (493)
.+................+........+..|..|++.|++++++.+.+.+. ++.++|.+.|.+.|..|.
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 328 APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 011100000011111222222222346789999999999999997766665 578899999999998764
No 64
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.93 E-value=2.1e-22 Score=211.63 Aligned_cols=364 Identities=12% Similarity=0.118 Sum_probs=231.9
Q ss_pred HHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHh
Q 011112 21 FTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILG 98 (493)
Q Consensus 21 f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~ 98 (493)
+..++. .+....+++|+++.+|+++.++|.+..+..+.-++ +|++|.++||.+.|..|||+|++.+.+...++..++.
T Consensus 16 ~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf 95 (473)
T PRK10429 16 FGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF 95 (473)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH
Confidence 444443 35666678888999999999999988877666565 8999999999988877889999999998888866665
Q ss_pred hcccchh--hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc-----
Q 011112 99 LNAFFRS--STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT----- 171 (493)
Q Consensus 99 ~~~~~~~--~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~----- 171 (493)
..++.+. ....+.+...+..++.+...+++.++..|+++ +++||.+..++.....++|..+++.+...+.+
T Consensus 96 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~--~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~ 173 (473)
T PRK10429 96 SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTL--DKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGG 173 (473)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4442211 23344455556678888999999999999986 36899999999888888876666655544321
Q ss_pred --cccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhh
Q 011112 172 --NIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKK 248 (493)
Q Consensus 172 --~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
..+|+....+.+++.++..+.+ +..||++...+. +.+ + + ++
T Consensus 174 ~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~--------~~~-----------~-----~---------~~--- 217 (473)
T PRK10429 174 DRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQ--------VSA-----------E-----G---------SH--- 217 (473)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccc--------ccc-----------c-----c---------cC---
Confidence 2357777777666655544444 346665322100 000 0 0 00
Q ss_pred hhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHH
Q 011112 249 NQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASF 328 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~ 328 (493)
. +.++.+ ..+++||.++..+...++.............+|.+...+ ++..
T Consensus 218 ----~----------------------~~~~~~---~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~ 267 (473)
T PRK10429 218 ----L----------------------TLKDIV---ALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADL 267 (473)
T ss_pred ----C----------------------CHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHH
Confidence 0 233322 234678777665544444333333333334455554444 4555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhH
Q 011112 329 LGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKF 408 (493)
Q Consensus 329 ~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 408 (493)
.+.+.....++.+++.++.+++.||+|+|+.+..+.++..++.+........ +....+..+....+.....+...
T Consensus 268 ~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~l~g~~~~~~~ 342 (473)
T PRK10429 268 FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA-----APHNALLIVIAGILLNIGTALFW 342 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc-----CchhHHHHHHHHHHHHHHHHHHH
Confidence 6666666778888999999999999999999887776555443222111000 00111111111222222222223
Q ss_pred hHHHHHHhhcCC-------CCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCC
Q 011112 409 MPFLILSGQLCP-------PGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISS 457 (493)
Q Consensus 409 ~~~~~~~~~~~p-------~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~ 457 (493)
....+++++.++ ++.+|..+|..+.+.++|..+++.+.|.+.+..|+..
T Consensus 343 ~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~~ 398 (473)
T PRK10429 343 VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGYVP 398 (473)
T ss_pred HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 333456666644 6678889999999999999999999999999888853
No 65
>PRK10133 L-fucose transporter; Provisional
Probab=99.93 E-value=9.7e-23 Score=211.90 Aligned_cols=349 Identities=12% Similarity=0.103 Sum_probs=226.6
Q ss_pred HHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHH
Q 011112 16 ICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPW 94 (493)
Q Consensus 16 ~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~ 94 (493)
+.+.+|+.++.......+.|.+++++|.|+.+.|+..+.+.+++.+ +++.|+++||+ +||+.++.+..+.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-----G~r~~l~~g~~~~~~~~ 105 (438)
T PRK10133 31 LCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-----SYKAGIITGLFLYALGA 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHH
Confidence 5566677787764444455666999999999999999999999987 79999999995 78889999999988888
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc-c-
Q 011112 95 LILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT-N- 172 (493)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~-~- 172 (493)
+++.... ..++++.+++.|+++|+|.+..++..+.++.|..+ +++|++.++.......+|..+|+.+++.+.. +
T Consensus 106 ~l~~~~~-~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~---~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 106 ALFWPAA-EIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGP---ESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7653111 01357788999999999999999999999988653 3666667899999999999999999876540 0
Q ss_pred ------------------------ccHHHHHHHHHHHHHHHHHHhh--ccccccccchhhhcccccCCCcccCCCCcccC
Q 011112 173 ------------------------IEIDRIFLLFTVLPAIQLLSCG--LVKENRVSTKVLKEFSSSNGYHQVNGNESILD 226 (493)
Q Consensus 173 ------------------------~gw~~~f~~~~~~~~l~~i~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (493)
.+||++|+....+..+..+... ..||.+.+++ +
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~-----------~---------- 240 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH-----------S---------- 240 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-----------c----------
Confidence 2566667543433222222222 2333211100 0
Q ss_pred CCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhc
Q 011112 227 DEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVA 306 (493)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~ 306 (493)
+ + ++ . +. .++..+.+|+|.++...+..++....
T Consensus 241 -~-----~---------~~-------~----------------------~~---~~~~~~ll~~~~~~~~~l~~~~~~~~ 273 (438)
T PRK10133 241 -D-----A---------KQ-------G----------------------SF---SASLSRLARIRHWRWAVLAQFCYVGA 273 (438)
T ss_pred -c-----c---------cc-------c----------------------ch---hhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 0 0 00 0 00 11233456777765544333332222
Q ss_pred ccCCCcceeee-eeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccccc
Q 011112 307 VPNLSTVMFYY-QTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTV 385 (493)
Q Consensus 307 ~~~~~~~~~~~-~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 385 (493)
........+.| .++..|+|+.+.++......++.++|.++.+++.||+++|+.+..+.++..+..+. ....
T Consensus 274 ~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~-~~~~------- 345 (438)
T PRK10133 274 QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLI-SAFA------- 345 (438)
T ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH-HHHc-------
Confidence 11111122334 45668999999999989999999999999999999999999988876665443221 1111
Q ss_pred CccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 386 GISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 386 g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
+... .+....+..+..+..+.+.++...+..|+ +.+++.++.. ....|+.++|.+.|.+.|..|
T Consensus 346 --~~~~-~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 346 --GGHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred --CChH-HHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhcc
Confidence 1111 01111222233333444456677777665 4677888775 455778888899998888765
No 66
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=2.2e-23 Score=215.79 Aligned_cols=367 Identities=12% Similarity=0.067 Sum_probs=216.3
Q ss_pred chhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+++..+.+...+++..+. +.....++.++++++|+|+.++|...+.+.+...+ +|++|+++||+ +||+.++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-----g~r~~~~~~ 82 (420)
T PRK09528 8 KNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-----GLKKHLLWI 82 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHH
Confidence 445566566677776664 46667777888988999999999999999999887 89999999996 466666665
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
..+..+....+......+...........+.++..+.........+.+..++ ..++++..+|......++|..+|+.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 83 ISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-VSRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-HHhhccccchhhHHhhhHHHHHHHHHH
Confidence 4444333221111100000000111122222322222222222223333322 135678888888889999999999999
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHHHhhccc-cccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhh
Q 011112 167 GYALTNIEIDRIFLLFTVLPAIQLLSCGLVK-ENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKK 245 (493)
Q Consensus 167 g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (493)
|.+.+. +|+++|++.+++.++..+..++.+ |++++.+.+ +++ + ++ ++
T Consensus 162 g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~-----~~--------~~ 209 (420)
T PRK09528 162 GILFNI-NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-------NAL-----------G-----AN--------AS 209 (420)
T ss_pred HHHHhc-CchHhHHHHHHHHHHHHHHHhcccccccchhhhc-------cch-----------h-----cc--------cc
Confidence 999874 899999988876665555444443 332221000 000 0 00 00
Q ss_pred hhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeecc---C
Q 011112 246 NKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEI---L 322 (493)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~ 322 (493)
+...++.++.+|||.++...++.+.............+.|..+. .
T Consensus 210 --------------------------------~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (420)
T PRK09528 210 --------------------------------AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATP 257 (420)
T ss_pred --------------------------------cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00112344567888765544322221111111111123333222 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHH
Q 011112 323 NLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDA 402 (493)
Q Consensus 323 g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 402 (493)
+.+..+.|.+.....++..++.++.+++.||+++|+.+..+.++..+..+. ..+. ++.+.......+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l-~~~~---------~~~~~~~~~~~l~g~ 327 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG-SGFA---------TGPLEVSILKLLHAF 327 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH-HHhc---------ccHHHHHHHHHHHHH
Confidence 566677888877777888899999999999999999988877766654322 1111 111111111222222
Q ss_pred HHHhhHhHHHHHHhhcCCCCchHHHHHH-HHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 403 VNQFKFMPFLILSGQLCPPGIEGTLFAL-FMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 403 ~~~~~~~~~~~~~~~~~p~~~~gt~~gl-~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
...........++.+..|++.+++.++. +++..++|..+++.++|.+.|.+|+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~ 381 (420)
T PRK09528 328 EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF 381 (420)
T ss_pred HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 2222233345678888999999988766 6778889999999999999998774
No 67
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.92 E-value=1.9e-22 Score=210.90 Aligned_cols=352 Identities=10% Similarity=0.007 Sum_probs=220.4
Q ss_pred HHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 30 WTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
....+ .+.+++|.|.++.++..+.+.+...+ +|++|+++||+ +||+.++.+.++..++.+.+++.+ +++
T Consensus 39 ~~~~~-~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----g~r~~l~~~~~~~~~~~~~~~~~~----~~~ 108 (455)
T TIGR00892 39 TVFFK-ELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-----GCRPVVIAGGLLASLGMILASFSS----NVI 108 (455)
T ss_pred hhhHH-HHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-----CchHHHHhhHHHHHHHHHHHHHhh----hHH
Confidence 33444 44778999999999999888776655 89999999995 567788888888888877777764 344
Q ss_pred HHH-HHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Q 011112 109 HLI-VLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPA 187 (493)
Q Consensus 109 ~l~-~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~ 187 (493)
.+. ..|++.|++.+...++..+++.+.. + ++|+++.|+...+..+|..+++.+++.+.+.+|||+.|++.+++.+
T Consensus 109 ~l~~~~~~l~G~~~~~~~~~~~~~~~~~~---~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~ 184 (455)
T TIGR00892 109 ELYLTAGFITGLGLAFNFQPSLTMLGKYF---Y-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLL 184 (455)
T ss_pred HHHHHHHHHHHhcchhhhhHHHHHHHHHH---H-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 444 4568889888876666667777766 2 7899999999999999999999999999999999999999887766
Q ss_pred HHHHHhhcc-ccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCC
Q 011112 188 IQLLSCGLV-KENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKN 266 (493)
Q Consensus 188 l~~i~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (493)
+..+..+++ ++++.++..+.+ ++++ .+. +. .. ++ ...+ .
T Consensus 185 ~~~v~~~~~~~~~~~~~~~~~~----~~~~----~~~----~~-~~-~~------~~~~-------~------------- 224 (455)
T TIGR00892 185 HCCVCGALMRPVGPSQRVSKSK----SKEG----LPP----DG-ST-KK------LSKK-------S------------- 224 (455)
T ss_pred HHHHHHHHhCCCCccccccccc----cccc----CCC----CC-cc-cc------cccc-------c-------------
Confidence 554443333 322211100000 0000 000 00 00 00 0000 0
Q ss_pred CchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 011112 267 NPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYT 346 (493)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~ 346 (493)
..+..++ ..+ .+.+++|.++......++............+.|..+ .|++..+.++...+..++.+++.++
T Consensus 225 ------~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~ 295 (455)
T TIGR00892 225 ------TAEKINR-FLD-FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPS 295 (455)
T ss_pred ------hhhhhhh-hcc-hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111 001 246678887765544343333332222233445444 7999999999877788888888899
Q ss_pred HHHHHhcC--ChhHHHHHHH--HHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCC
Q 011112 347 YNGYLKRL--KLRRILLLTQ--VGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPG 422 (493)
Q Consensus 347 ~~~~~~~~--~~r~~l~~~~--~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 422 (493)
.+++.||. +.|+...... ++..+.. +..... ++.+.++...++..+..+....+..+.+.+..|++
T Consensus 296 ~g~l~d~~~~~~~~~~~~~~~~~~~~l~~-ll~~~~---------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~ 365 (455)
T TIGR00892 296 CGLIAGLKWIRPHVQYLFSFALLFNGLTH-LLCALA---------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ 365 (455)
T ss_pred HHHHhcccccCHHHHHHHHHHHHHHHHHH-HHHHHh---------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH
Confidence 99999863 3343333222 2221211 111111 11111111222333333333334467788999999
Q ss_pred chHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 423 IEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 423 ~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
++++.+|++++..++|+.+||.++|.+.+..|
T Consensus 366 ~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 366 RFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 99999999999999999999999999988764
No 68
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.91 E-value=8.2e-22 Score=207.25 Aligned_cols=362 Identities=20% Similarity=0.249 Sum_probs=249.3
Q ss_pred hhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 10 VSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 10 ~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
.+....+....++..+.. +...+++.++. ++.-|+.+++.+..+..+|..+ +++.|.++||+ .||++++.+.
T Consensus 9 ~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-----drrrili~~~ 82 (524)
T PF05977_consen 9 NRNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-----DRRRILILSQ 82 (524)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cchHHHHHHH
Confidence 333443445666666654 55666555544 5677999999999999999975 99999999995 6788888888
Q ss_pred HHHHHHHHHHhhc-ccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 88 VLSLVPWLILGLN-AFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 88 ~l~~~~~~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
++..+....++.. .....+.+.+++.-++.+++.++..+..++++.|+++ +++..+++++.....++.-++||.+|
T Consensus 83 ~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~---~~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 83 LLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVP---KEDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---HhhHHHHHHHHHHHHHHHHhccchHH
Confidence 7766554444322 1112356677788888999999999999999999995 47888999999999999999999999
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhh
Q 011112 167 GYALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKN 246 (493)
Q Consensus 167 g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (493)
|.+....|-.++|.+.++..++..+.....+.++++.+. + +++
T Consensus 160 G~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~----------------------------~--------~e~- 202 (524)
T PF05977_consen 160 GILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSL----------------------------P--------RER- 202 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc----------------------------c--------hhh-
Confidence 999999999999998886655544333333322111100 0 000
Q ss_pred hhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCH
Q 011112 247 KKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEA 326 (493)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~ 326 (493)
+.+++++.++-. .++|.+...++..++.++........++.+..+.+|.++
T Consensus 203 --------------------------~~~~l~~G~ryv---~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a 253 (524)
T PF05977_consen 203 --------------------------FFSALREGLRYV---RSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGA 253 (524)
T ss_pred --------------------------hhhhHHHHHHHH---hcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcH
Confidence 011233333222 234544443332233222222233345666677799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHh
Q 011112 327 SFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQF 406 (493)
Q Consensus 327 ~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 406 (493)
..+|++....++|+++|+++..++.+|.+.++++..+.+..+++.+. +.+. ++.+..+...++.+++...
T Consensus 254 ~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~-lal~---------~~~~~~~~~l~l~G~~~~~ 323 (524)
T PF05977_consen 254 SGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLL-LALS---------PSFWLALIALFLAGAAWII 323 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHH-Hhcc---------hHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888777766654221 1111 1222222222333333334
Q ss_pred hHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 407 KFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 407 ~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
......+.+++..|++.+|+.++++++..+.+..+|+++.|.+.+.+|..
T Consensus 324 ~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~ 373 (524)
T PF05977_consen 324 ANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVR 373 (524)
T ss_pred HHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 44455678999999999999999999999999999999999999998764
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=1.9e-22 Score=201.69 Aligned_cols=342 Identities=24% Similarity=0.293 Sum_probs=243.1
Q ss_pred HHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHH
Q 011112 16 ICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVP 93 (493)
Q Consensus 16 ~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~ 93 (493)
+...++..++.. ......+.+ .+++|.+.++.++..+...++..+ +|++|+++||+ +||+.+..+.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-----g~r~~~~~~~~~~~~~ 77 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLL-AEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-----GRRRVLLLGLLLFALG 77 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----CCchhhHHHHHHHHHH
Confidence 445566777654 555555555 556899999999999999888776 89999999995 5667888888888888
Q ss_pred HHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011112 94 WLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI 173 (493)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~ 173 (493)
...+...+ +++.+.+.|++.+++.+...+..++++.|..+ +++|++.+++......+|..+|+.+++.+.++.
T Consensus 78 ~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 78 SLLLAFAS----SLWLLLVGRFLLGLGGGALYPAAAALIAEWFP---PKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred HHHHHHhc----cHHHHHHHHHHHHcccccccHhHHHHHHHhCC---ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88777664 56778899999999999999999999999985 489999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhh
Q 011112 174 EIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKR 253 (493)
Q Consensus 174 gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (493)
+||+.+++.+++.++..+...+.+ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~-----~-------------------------------------------------- 175 (352)
T cd06174 151 GWRWLFLILAILGLLLALLLLFLL-----R-------------------------------------------------- 175 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-----H--------------------------------------------------
Confidence 999999988876665554444333 1
Q ss_pred hhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHH
Q 011112 254 MFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTAR 333 (493)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~ 333 (493)
+++...+..++............+.+..+..|.+..+.+...
T Consensus 176 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T cd06174 176 --------------------------------------LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLL 217 (352)
T ss_pred --------------------------------------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 000000000010111111111223344454688999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhH-HHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHH
Q 011112 334 VVGWVGLMLGTYTYNGYLKRLKLRR-ILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFL 412 (493)
Q Consensus 334 ~~~~~~~~l~~~~~~~~~~~~~~r~-~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~ 412 (493)
....++.+++.++.+++.||.++|+ .+..+.++..+..+... .. ++.........+.............
T Consensus 218 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~---------~~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 218 SLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA-LA---------PSLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hh---------ccHHHHHHHHHHHHHHHhccchhHH
Confidence 8899999999999999999999998 88777777666533221 11 1111111112222233333344456
Q ss_pred HHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh
Q 011112 413 ILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 413 ~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (493)
++..|..|+++|++.+|+.+...+++..+++.+.+.+.+..|+. ..+.+.+++.++..+..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~--------~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 288 TLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYG--------GVFLILAALALLAALLL 348 (352)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcc--------hHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999998865432 23444555555554444
No 70
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=1.5e-22 Score=214.56 Aligned_cols=379 Identities=13% Similarity=0.096 Sum_probs=236.7
Q ss_pred HHHHhhhCCC---HhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHH
Q 011112 35 YQLKDKLKFS---PSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHL 110 (493)
Q Consensus 35 ~~l~~~~g~s---~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l 110 (493)
+.+.+|+|++ ..+.++..+++.+++.+ .+++|+++||+ +||+.++.+.++..++.+++++++ +++.+
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-----Grr~~~~~~~~~~~i~~~~~~~~~----~~~~~ 183 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-----GRKKVLLLSTLVTAVSGVLTAFSP----NYTVF 183 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-----cchHHHHHHHHHHHHHHHHHHHcc----cHHHH
Confidence 4457789999 89999999999999988 78999999995 677888888888888888877765 57788
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Q 011112 111 IVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQL 190 (493)
Q Consensus 111 ~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~ 190 (493)
++.|++.|++.+...+...+++.|..+ +++|+++.++......+|.++++.+++.+.+ ||+.|++.+++.++..
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~---~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~ 257 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLP---KKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFF 257 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecC---hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999884 5889999999999999999999999877654 9999999887766666
Q ss_pred HHhhccccccccchhhh--c-cc-ccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCC
Q 011112 191 LSCGLVKENRVSTKVLK--E-FS-SSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKN 266 (493)
Q Consensus 191 i~~~~~~e~~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (493)
+..+++||++++...+. + +. .+++..+.++.+ ..+ +. ... ...+ .
T Consensus 258 ~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~---~~~-----~~--~~~-~~~~-------~------------- 306 (505)
T TIGR00898 258 LLSWFVPESPRWLISQGRIEEALKILQRIAKINGKK---LPA-----EV--LSL-SLEK-------D------------- 306 (505)
T ss_pred HHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCC---CCH-----HH--Hhh-hhhh-------h-------------
Confidence 66677899876542111 0 00 000000000000 000 00 000 0000 0
Q ss_pred CchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 011112 267 NPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYT 346 (493)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~ 346 (493)
. +.++.....++++++|+++...+..++.+............+.+ .++.+.. .......+..+.+.++
T Consensus 307 -------~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~i~~~~~ 374 (505)
T TIGR00898 307 -------L-SSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLG-NLGGNIY---LDLFISGLVELPAKLI 374 (505)
T ss_pred -------h-hhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhcccc-ccCCChH---HHHHHHHHHHHHHHHH
Confidence 0 00000013456677777655443322212211111111122322 2444432 2233455667778888
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHH
Q 011112 347 YNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGT 426 (493)
Q Consensus 347 ~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt 426 (493)
.+++.||+++|+.+..+.++..++.+. +..... ...+.......+..+.....+....++..|.+|++.|++
T Consensus 375 ~~~l~dr~grr~~~~~~~~~~~~~~l~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 446 (505)
T TIGR00898 375 TLLLIDRLGRRYTMAASLLLAGVALLL-LLFVPV-------DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNL 446 (505)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHcCC-------CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhh
Confidence 889999999999988887776665332 222110 111111111122222222223334678899999999999
Q ss_pred HHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCCCC
Q 011112 427 LFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKGAT 489 (493)
Q Consensus 427 ~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 489 (493)
++|+.++...+|+.++|.+.+ +.+. +. ...+.+.+++.++..+...++||+++
T Consensus 447 ~~g~~~~~~~ig~~i~p~i~~-~~~~-~~--------~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 447 GVGVCSTMARVGSIISPFLVY-LGEK-WL--------FLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred hHhHHHHHHHHHHHHHhHHHH-HHHH-HH--------hhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 999999999999999999888 4432 21 12234444555555555567787665
No 71
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=6.5e-22 Score=204.55 Aligned_cols=351 Identities=11% Similarity=0.054 Sum_probs=215.9
Q ss_pred HHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHH
Q 011112 17 CLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPW 94 (493)
Q Consensus 17 ~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~ 94 (493)
...+|+..+. ++...++++++++++|.|.+|+|++.+++.+...+ +|++|.++||+ .|||+.+..+.+...++.
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~----g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW----LSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHHHHH
Confidence 3445555544 46667888898889999999999999999998877 89999999995 256777777777766666
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh-----hchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 95 LILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKS-----ERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~-----~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
....+.+ +++.+.+.|.+.+++.+...+..+++..+...+ .+...|.+..| ++|.++|+.++|.+
T Consensus 84 ~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l 153 (418)
T TIGR00889 84 FFAAQVT----TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL 153 (418)
T ss_pred HHHHHhc----CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh
Confidence 5555543 456667788787877666666666665433220 01123444444 47888999999988
Q ss_pred hccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhh
Q 011112 170 LTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKN 249 (493)
Q Consensus 170 ~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
.....|+ .|++.+++.++..+..+++||+++.+++ + + ++ . +
T Consensus 154 ~~~~~~~-~f~~~~~~~~~~~~~~~~~~e~~~~~~~----------~-----------~-----~~------~--~---- 194 (418)
T TIGR00889 154 DIELSNI-QLYITAGSSALLGVFALTLPDIPVAKST----------A-----------K-----MS------I--K---- 194 (418)
T ss_pred cccchhH-HHHHHHHHHHHHHHHHhcCCCCCCCccc----------c-----------c-----cC------H--H----
Confidence 4333354 4666666655555555567876432210 0 0 00 0 0
Q ss_pred hhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCC----
Q 011112 250 QKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLE---- 325 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s---- 325 (493)
+ ..+. +..+.+|+|+++...+..++............+.|..+ .|.+
T Consensus 195 ---~----------------------~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 245 (418)
T TIGR00889 195 ---V----------------------MLGL---DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFA 245 (418)
T ss_pred ---H----------------------Hhhh---hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hccccccc
Confidence 0 0000 12345678887655444443222111111111223322 3433
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHH
Q 011112 326 ----ASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVD 401 (493)
Q Consensus 326 ----~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 401 (493)
....+.......++.+++.+..+++.||+++|+++..+.++..+..... ...... ....+.......+..
T Consensus 246 ~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~-~~~~~~-----~~~~~~l~l~~~l~g 319 (418)
T TIGR00889 246 DSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFF-AYGDPE-----YFGYALLFLSMIVYG 319 (418)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHcCcc-----hhhHHHHHHHHHHHH
Confidence 3566777778888888999999999999999999998888776643221 111100 000111111112222
Q ss_pred HHHHhhHhHHHHHHhhcCCCCchHHHHHHHH-HHHhhhhhhhHhHHHHhHHhhcC
Q 011112 402 AVNQFKFMPFLILSGQLCPPGIEGTLFALFM-SISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~-~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
............++.|..|++.+++++|+.+ ...++|..+||.++|.+.|++|.
T Consensus 320 ~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~ 374 (418)
T TIGR00889 320 CAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFA 374 (418)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 2222223333567899999999999999997 56789999999999999998763
No 72
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.91 E-value=6.7e-23 Score=212.76 Aligned_cols=352 Identities=19% Similarity=0.222 Sum_probs=245.8
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhc-ccc-h
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLN-AFF-R 104 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~-~~~-~ 104 (493)
.....+.+++.+.+|+++..+|.+..+..+-.++ +|+.|.++||.+.|..||||+++.+.++.+++..++... |.. +
T Consensus 19 ~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~ 98 (428)
T PF13347_consen 19 LLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLS 98 (428)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhh
Confidence 4455677888999999999999987777665555 899999999999887799999999999999998887766 411 1
Q ss_pred --hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-------cH
Q 011112 105 --SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-------EI 175 (493)
Q Consensus 105 --~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-------gw 175 (493)
.....+.+..++..++.....++..++..|+++ ++++|.+..+.......+|..+...+.+.+.+.. +|
T Consensus 99 ~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~--~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~ 176 (428)
T PF13347_consen 99 FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTP--DPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGY 176 (428)
T ss_pred hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccc--cHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHH
Confidence 122334566666688999999999999999986 3589999999999999999987777777665422 68
Q ss_pred HHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhh
Q 011112 176 DRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRM 254 (493)
Q Consensus 176 ~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
++...+.+++.++..+.+ +..||++++.+. + +++ .
T Consensus 177 ~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~--------~----------------------------~~~-------~- 212 (428)
T PF13347_consen 177 RWMALVLAIVGLVFFLITFFFVKERSVEVTE--------Q----------------------------EKK-------I- 212 (428)
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeccccccc--------c----------------------------ccc-------c-
Confidence 998888887776665543 557772221100 0 000 0
Q ss_pred hhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHH
Q 011112 255 FKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARV 334 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~ 334 (493)
+.++ .+++.+|||.+....+..++........+....+|.++.+|.+ +..+....
T Consensus 213 ---------------------~~~~---~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~ 267 (428)
T PF13347_consen 213 ---------------------SLRD---SLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFML 267 (428)
T ss_pred ---------------------cccc---chhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHH
Confidence 2222 2445678888776665555545555444555567777767776 45666667
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHH
Q 011112 335 VGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLIL 414 (493)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 414 (493)
...++.+++.++++++.||+|+|+.+..+.++..+..+.. .+... .+.+..+....+.....+..+....++
T Consensus 268 ~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 268 IFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL-FFLGP-------GSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH-HHHHh-------hhHHHHHHHHHHhHhhhcccccccccc
Confidence 7788889999999999999999999999988887764332 22210 122211112222222222222222345
Q ss_pred HhhcCC-------CCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCC
Q 011112 415 SGQLCP-------PGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSG 458 (493)
Q Consensus 415 ~~~~~p-------~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~ 458 (493)
.+|..+ ++.+|..+|.+++..+++..+++.+.+.+.+..|+...
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~~ 390 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYDAN 390 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcCCC
Confidence 555544 56789999999999999999999999999998888654
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.91 E-value=2.5e-22 Score=206.18 Aligned_cols=361 Identities=14% Similarity=0.100 Sum_probs=221.4
Q ss_pred hHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHH
Q 011112 11 SFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTV 88 (493)
Q Consensus 11 ~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~ 88 (493)
+..|.+...+++.... +.....++.++++++|.|+.+.|...++..+...+ +|++|+++||+ +||+.++.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-----grr~~~~~~~~ 76 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-----GLKKHLLWIIS 76 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHH
Confidence 3455565666665554 45666777888888999999999999999998887 89999999996 45666655544
Q ss_pred HHHHHHHHH---hhcccc-hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 89 LSLVPWLIL---GLNAFF-RSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 89 l~~~~~~~~---~~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
..++..... ...+.. ........+.+++.+++.+...+..+++..|.. ++++...|......++|.++|+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS-----RNSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh-----hhcccccchhhhhcccHHHHHHH
Confidence 443333221 111100 011223345566777777777666666665543 23445667777888999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHhhc-cccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhh
Q 011112 165 LGGYALTNIEIDRIFLLFTVLPAIQLLSCGL-VKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKR 243 (493)
Q Consensus 165 i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (493)
++|.+.+ .+||++|++.+++.++..+..++ .||++++++. . +++ +++ + +
T Consensus 152 ~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~----------~~~----~--------~ 201 (396)
T TIGR00882 152 IAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATV-A------NAL----------GAN----A--------S 201 (396)
T ss_pred HHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhh-h------ccc----------ccc----c--------C
Confidence 9998876 49999999988777766654444 3333221110 0 000 000 0 0
Q ss_pred hhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccC-
Q 011112 244 KKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEIL- 322 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~- 322 (493)
++ +. ++..+.+|||+++...+..+.............+.|.++..
T Consensus 202 ~~------------------------------~~----~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~ 247 (396)
T TIGR00882 202 AF------------------------------SL----KLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA 247 (396)
T ss_pred CC------------------------------CH----HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00 11 13456678888765544333222211111111233433332
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHH
Q 011112 323 --NLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALV 400 (493)
Q Consensus 323 --g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~ 400 (493)
+.+....|.......+...++....+++.||+++|+.+.++.++..+.... .... ++.+.......+.
T Consensus 248 ~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~-~~~~---------~~~~~~~~~~~l~ 317 (396)
T TIGR00882 248 TPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIG-SSFA---------TTALEVVILKMLH 317 (396)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHhc---------CChHHHHHHHHHH
Confidence 556667788777777888888888999999999999988887766654221 1111 1111111112222
Q ss_pred HHHHHhhHhHHHHHHhhcCCCCchHHHHHH-HHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 401 DAVNQFKFMPFLILSGQLCPPGIEGTLFAL-FMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl-~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.............+..+..|++.+++.++. ++...++|+.+++.++|.+.|.+|+
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~ 373 (396)
T TIGR00882 318 AFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc
Confidence 222222222233456777888888888776 6788999999999999999998775
No 74
>PRK09848 glucuronide transporter; Provisional
Probab=99.91 E-value=1.4e-21 Score=204.03 Aligned_cols=381 Identities=13% Similarity=0.106 Sum_probs=227.9
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcc-cch-
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNA-FFR- 104 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~-~~~- 104 (493)
+....+++|+++++|++..++|.+.++..+..++ +|++|.++||++.|+.|||++++.+.+...+...++...+ ..+
T Consensus 26 ~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (448)
T PRK09848 26 MGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSH 105 (448)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCc
Confidence 4445566788999999999999999888887776 8999999999987766788898877776655544433222 111
Q ss_pred -hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHH-----HHHHHHHHHHHHhhccc--cHH
Q 011112 105 -SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMA-----FGGICGSLLGGYALTNI--EID 176 (493)
Q Consensus 105 -~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~-----~G~~lg~~i~g~l~~~~--gw~ 176 (493)
......++...+.+++.+...++..++..++++ ++++|.+..++...+.+ +|..++|.+++...+.. +|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~--~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~ 183 (448)
T PRK09848 106 SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQ--QPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYH 183 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 122233444556678888888899999888876 35788888777654433 45555666655432211 121
Q ss_pred HHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhh
Q 011112 177 RIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMF 255 (493)
Q Consensus 177 ~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
....+.+++..+..+. ....||+.+.++ + + .
T Consensus 184 ~~~~~~~v~~~~~~~~~~~~~~e~~~~~~-----------------------------~----------~-------~-- 215 (448)
T PRK09848 184 FWTIVLAIAGMVLYFICFKSTRENVVRIV-----------------------------A----------Q-------P-- 215 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCcEeccCCCc-----------------------------c----------C-------C--
Confidence 1112222222222222 223455432110 0 0 0
Q ss_pred hhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHH
Q 011112 256 KIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVV 335 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~ 335 (493)
+.++ .++..+|||.+....+..++............++|.++.+|.++...++....
T Consensus 216 --------------------~~~~---~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 272 (448)
T PRK09848 216 --------------------SLKI---SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQ 272 (448)
T ss_pred --------------------CHHH---HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHH
Confidence 1122 23456788887765544444333333333445677777788877655555555
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILS 415 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 415 (493)
..++.+++.++.+++.+|+++|+.+.++.++..++.+. +.... ..+.+.......+..........+..++.
T Consensus 273 ~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~-~~~~~-------~~~~~~~~~~~~l~g~G~~~~~~~~~al~ 344 (448)
T PRK09848 273 NLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLL-FFWVS-------VWSLPVALVALAIASIGQGVTMTVMWALE 344 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH-HHHcC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888999999999999999999888776655322 22111 01111111111122222223333445666
Q ss_pred hhcCCC-------CchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCc------cchHHHH-HHHHhhhhhhhhhh
Q 011112 416 GQLCPP-------GIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSF------DNLLLGI-SIQALCTFIPIAFL 481 (493)
Q Consensus 416 ~~~~p~-------~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~------~~~~~~~-~~~~~~~~~~~~~~ 481 (493)
++..|+ +.+|..+|+++...++|..+|+.+.+.+.+..|+....- ......+ .+.+++.+++.++.
T Consensus 345 ~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 424 (448)
T PRK09848 345 ADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVII 424 (448)
T ss_pred HHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777664 357999999999999999999999999998888753211 1222332 33444455555555
Q ss_pred hcccCCCC
Q 011112 482 FLIPKGAT 489 (493)
Q Consensus 482 ~~l~~~~~ 489 (493)
...|-++|
T Consensus 425 ~~y~l~~~ 432 (448)
T PRK09848 425 WFYPLTDK 432 (448)
T ss_pred HHeeCCHH
Confidence 56664433
No 75
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.91 E-value=1.5e-22 Score=204.93 Aligned_cols=348 Identities=14% Similarity=0.087 Sum_probs=216.8
Q ss_pred HHHHHHHHHHhHHHhHHHHHHH-HHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHH
Q 011112 14 WLICLIYFTQGFRSFVWTAVSY-QLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSL 91 (493)
Q Consensus 14 ~~~~~~~f~~g~~~~~~~~~~~-~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~ 91 (493)
++..+.++..........++.| ++++++|+|..+.++..+++.+++.+ ++++|+++||+ +||+.++.+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~ 78 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-----GPRYTTTLSLLLLA 78 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHH
Confidence 4345555555555444445555 58889999999999999999999887 79999999995 67778888888888
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011112 92 VPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT 171 (493)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~ 171 (493)
++.+.+++.+. +++.+++.|++++++.+.. ++..+++.|.. |+++|+++.++.....++|..+++.+++.+..
T Consensus 79 i~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~---~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 79 IPCLWAGLAVQ---SYSVLLLLRLFIGIAGGSF-ASCMPWISFFF---PKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHhh---hHHHHHHHHHHHHHhchhh-HhHHHHHHHhc---CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 88887776531 4677888999999886544 55678888887 45899999999998888888888888776654
Q ss_pred ----------cccHHHHHHH-HHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhh
Q 011112 172 ----------NIEIDRIFLL-FTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNIS 239 (493)
Q Consensus 172 ----------~~gw~~~f~~-~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (493)
+.+||+.|++ .+++..+..+. ..+.+|++++++++ + + .+..+ +. +
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~-~~~~~-----~~----~----- 208 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPAT-G-------K-LSFKG-----AR----W----- 208 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccc-h-------h-ccccc-----cc----c-----
Confidence 3489999944 34444443333 33455544322100 0 0 00000 00 0
Q ss_pred hhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeee
Q 011112 240 TKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQT 319 (493)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 319 (493)
+ ..++..++.++.+++|+++...+..++............+.|.+
T Consensus 209 -----~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
T TIGR00886 209 -----S------------------------------VGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFK 253 (366)
T ss_pred -----c------------------------------ccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00011113345567777665544333322222222333455667
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHH
Q 011112 320 EILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSAL 399 (493)
Q Consensus 320 ~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~ 399 (493)
+.+|+++.+.+.......+..+++.++.+++.||+++|+.+..+......+..... ..... ............+
T Consensus 254 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~ 327 (366)
T TIGR00886 254 DQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVV-LGLVS-----PLSLAVFIVLFVA 327 (366)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHH-hcCCC-----cchHHHHHHHHHH
Confidence 77899999999887777888888999999999999998877766555444322211 11100 0011111111111
Q ss_pred HHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhh
Q 011112 400 VDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFG 438 (493)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg 438 (493)
.....+....+......+..| +++|+.+|++++++++|
T Consensus 328 ~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 328 LFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 112222222334455666665 69999999999988876
No 76
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=4.8e-23 Score=216.13 Aligned_cols=370 Identities=14% Similarity=0.071 Sum_probs=227.6
Q ss_pred hhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 011112 40 KLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQN 118 (493)
Q Consensus 40 ~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 118 (493)
++|++.++.|.+.+.+.+++.+ +++.|+++||+ +||+.+..+.++..++.+++..... .+++.+++.|+++|
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-----VFKWSIGIGMFLSSVISIVIPWAAG--GGIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-----CcchhhHHHHHHHHHHHHHHHHHHH--cCchHHHHHHHHHH
Confidence 6899999999999999999987 79999999995 5677777887777777665543311 23556889999999
Q ss_pred hhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-ccHHHHHHHHHHHHHHHHHHhhc-c
Q 011112 119 LGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN-IEIDRIFLLFTVLPAIQLLSCGL-V 196 (493)
Q Consensus 119 ~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~-~gw~~~f~~~~~~~~l~~i~~~~-~ 196 (493)
++.+...+...+++.|.. |+++|++++++...+..+|.++++.+++++.+. .+||++|++.+++.++..+.+++ .
T Consensus 143 ~~~~~~~~~~~~~~~~~~---~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWA---PPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred HhcccchhhHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence 999999999999999887 458999999999999999999999999999988 49999999998877766655543 4
Q ss_pred ccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhh
Q 011112 197 KENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHS 276 (493)
Q Consensus 197 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (493)
+|+|+.+++..+ +|++..++. .++.. . ++ +
T Consensus 220 ~~~p~~~~~~~~----~~~~~i~~~----~~~~~-----------~-~~------------------------------~ 249 (465)
T TIGR00894 220 ADDPSIHPCISK----FEKKYINSS----LQGQK-----------G-ST------------------------------R 249 (465)
T ss_pred cCCcccCCCCCH----HHHHHHHhh----ccccc-----------C-CC------------------------------C
Confidence 554433210000 000000000 00000 0 00 0
Q ss_pred HHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 011112 277 LKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKL 356 (493)
Q Consensus 277 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~ 356 (493)
.+ .++++.+++|.++...+..+..+.........++.|+.+.+|++..+.|+......++.+++.++.|++.||.++
T Consensus 250 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 250 QS---LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred CC---CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 023345677777765544444333332223334566667789999999998777788888888888888887543
Q ss_pred hHH--------HHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHH
Q 011112 357 RRI--------LLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLF 428 (493)
Q Consensus 357 r~~--------l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~ 428 (493)
|+. +..+....... ...+.... . .......+....+..+..............+..|+ ..|+.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ 398 (465)
T TIGR00894 327 SKTLSLTAARKIFNGIGGLGPG-IFAYALPY-L-----SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIK 398 (465)
T ss_pred cCCCcHHHHHHHHHHHHHHHHH-HHHHHHHH-c-----CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHH
Confidence 311 11111111111 00001100 0 01111111111122222222222223344455554 889999
Q ss_pred HHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhccc
Q 011112 429 ALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIP 485 (493)
Q Consensus 429 gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (493)
|+.++.++++..++|.+.|.+.+..+ ...+...+.+.+.+.+++.++...++
T Consensus 399 g~~~~~~~l~~~i~p~l~g~~~~~~~-----~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 399 GITGLPGFIGGLIASTLAGNILSQDS-----KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheeeCCCC-----chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 99999998888888888777765321 12244555566666666655544444
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.91 E-value=6.9e-22 Score=229.09 Aligned_cols=330 Identities=12% Similarity=0.044 Sum_probs=217.5
Q ss_pred hhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH---HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhh
Q 011112 46 SASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI---STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGS 121 (493)
Q Consensus 46 ~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~---~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 121 (493)
...++..+++.+++.+ +|+.|+++||+ +||+.+.. ..+..++..+..... .+++.++++|+++|++.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-----~rk~~~~~~~~~~~~~~~~~~~~~~~----~s~~~l~~~~~l~gi~~ 122 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-----DKAKLAKILKFAEIGIAALAIYGFHL----NSVPLLFAALFLMGIHS 122 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-----cHHHHHHHHHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHH
Confidence 3467777788899876 89999999995 56655422 222222222221222 25788999999999999
Q ss_pred hhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhhccccccc
Q 011112 122 AMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRV 201 (493)
Q Consensus 122 ~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~ 201 (493)
+...+...+++.|+.+ +++|++++|+...+.++|.++||+++|++.+..+|++.|...++..++..++++++|++++
T Consensus 123 a~~~p~~~a~l~~~~~---~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (1140)
T PRK06814 123 ALFGPIKYSILPDHLN---KDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGN 199 (1140)
T ss_pred HhhchHHHHhhHhhcC---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 9999999999999995 4899999999999999999999999999999999999985554444444445556666543
Q ss_pred cchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHH
Q 011112 202 STKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAI 281 (493)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (493)
.... .+ .+ . . ..++..
T Consensus 200 ~~~~---------~~----------~~-----~------------------~----------------------~~~~~~ 215 (1140)
T PRK06814 200 AAPD---------LK----------ID-----R------------------N----------------------IIRSTI 215 (1140)
T ss_pred CCCC---------Ce----------ec-----c------------------c----------------------hHHHHH
Confidence 2210 00 00 0 0 011111
Q ss_pred HHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHH
Q 011112 282 YSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILL 361 (493)
Q Consensus 282 ~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~ 361 (493)
..+....++|.++...+..++.+..........+.|..+.+|.++...|++.....++.++|+++.+++.++...++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~ 295 (1140)
T PRK06814 216 TLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVP 295 (1140)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeeh
Confidence 23444567787776554433333333333334566777778999999999988899999999999999998877666665
Q ss_pred HHHHHHHHHhhhhhhh-eecc--ccc-------cCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHH
Q 011112 362 LTQVGLSILSFLDIVL-VSRM--NLT-------VGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALF 431 (493)
Q Consensus 362 ~~~~~~~~~~l~~~~~-~~~~--~~~-------~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~ 431 (493)
.+.++..+..+..... .... ... ...+..+.+....++..+..+....+..+++.+.+|++.+|+.+|+.
T Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~ 375 (1140)
T PRK06814 296 IGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAAN 375 (1140)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHH
Confidence 5555444432211111 0000 000 00011111111122333344445556778899999999999999999
Q ss_pred HHHHhhhhhhhHhHHHHhHH
Q 011112 432 MSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 432 ~~~~~lg~~~~~~i~g~l~~ 451 (493)
+++.+++..+++.+++.+.+
T Consensus 376 ~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 376 NVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888875
No 78
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.90 E-value=2.4e-22 Score=204.55 Aligned_cols=340 Identities=15% Similarity=0.120 Sum_probs=214.0
Q ss_pred HHHHHHhhhC--CCHhhHHHHHHHHH--hhH---hh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch
Q 011112 33 VSYQLKDKLK--FSPSASQFVSAVAF--FPW---SI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR 104 (493)
Q Consensus 33 ~~~~l~~~~g--~s~~~~g~~~s~~~--l~~---~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~ 104 (493)
..+++.+++. .++++.+...+... ..+ .+ +|++|+++||+ +||+.++.+.++..++.+++++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-----g~r~~l~~~~~~~~~~~~~~~~~~~~~ 89 (394)
T TIGR00883 15 AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-----GRKKTLVITLLMMGIGTLLIGLLPSYA 89 (394)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-----hhHHHHHHHHHHHHHHHHHHhhCCChh
Confidence 3444555543 44566666554322 222 23 68999999995 678888889888888888888776421
Q ss_pred h----hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh--------cc
Q 011112 105 S----STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL--------TN 172 (493)
Q Consensus 105 ~----~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~--------~~ 172 (493)
. ....+++.|+++|++.+...+...+++.|..+ +++|++..+....+..+|.++++.+++.+. +.
T Consensus 90 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~ 166 (394)
T TIGR00883 90 TIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAP---PGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLE 166 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCC---cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhc
Confidence 1 11247788999999999888888999999874 589999999999999999999998877653 35
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhh
Q 011112 173 IEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKK 252 (493)
Q Consensus 173 ~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (493)
.+||+.|++.+++.++........||+++.++.+++ + ++ .+
T Consensus 167 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-------------------~~--------~~------- 207 (394)
T TIGR00883 167 WGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK-----H-------------------KK--------KR------- 207 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-----c-------------------cc--------cc-------
Confidence 789999988775544433333445665433210000 0 00 00
Q ss_pred hhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccc--hHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 253 RMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPE--ILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
. +.++ .+++++ ++......++............+.|.++++|+++.+.+
T Consensus 208 ~----------------------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 258 (394)
T TIGR00883 208 G----------------------PIRE-------TLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSAL 258 (394)
T ss_pred C----------------------CHHH-------HHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHH
Confidence 0 1111 122222 33333222222222222223345566666899998898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhH
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMP 410 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~ 410 (493)
.......++.+++.++.+++.||+++|+.+.....+..+..+........ .++.+.......+..........+
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~ 332 (394)
T TIGR00883 259 LVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD------SGSFTLFFFLVLGLALIGGMYTGP 332 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc------CCchHHHHHHHHHHHHHHHHHhhh
Confidence 88778888889999999999999999998775554443322111111100 011111111122233333344455
Q ss_pred HHHHHhhcCCCCchHHHHHHHHHH-HhhhhhhhHhHHHHhHHhhc
Q 011112 411 FLILSGQLCPPGIEGTLFALFMSI-SNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 411 ~~~~~~~~~p~~~~gt~~gl~~~~-~~lg~~~~~~i~g~l~~~~g 454 (493)
..+++.|..|++.|++++++.... ..+|..++|.++|.+.++.|
T Consensus 333 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 333 MGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 678899999999999999985444 45788899999999999876
No 79
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.90 E-value=2.2e-21 Score=199.55 Aligned_cols=380 Identities=10% Similarity=0.031 Sum_probs=233.5
Q ss_pred hhhhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHh-hhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchh
Q 011112 5 KNVFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKD-KLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIP 81 (493)
Q Consensus 5 ~~~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~-~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~ 81 (493)
+|..-++.++ +...+|..+|.. ....++.+.+.+ ++|+|.+|.++..++..+.+.+ +.+.|+++||+ +.|+
T Consensus 28 ~~~~a~r~l~-~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-----G~R~ 101 (462)
T PRK15034 28 GKHIARRNLW-ISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-----GGRR 101 (462)
T ss_pred CchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CChH
Confidence 3444455555 666777777765 455555555544 7999999999999999998887 68889999996 5566
Q ss_pred HHHHHHHHHHHHHHHHhhc-ccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHH
Q 011112 82 YLVISTVLSLVPWLILGLN-AFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGI 160 (493)
Q Consensus 82 ~ii~~~~l~~~~~~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~ 160 (493)
++..+..+..+..+.+++. ++..++++.+++.|++.|++ +...++....+.+.. |+++||++.|+.....++|..
T Consensus 102 v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wf---p~~~rG~A~Gi~~g~G~~G~~ 177 (462)
T PRK15034 102 WTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFF---PKAKQGSALGINGGLGNLGVS 177 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHC---CHhHhHHHHHHHHHHHhhHHH
Confidence 7778877777777777764 11123688899999999998 556677778888777 458999999999777777777
Q ss_pred HHHHHHHHhh-----c-------------cccHHHHHHHHHHHHHHHHHHhhc-cccccccchhhhcccccCCCcccCCC
Q 011112 161 CGSLLGGYAL-----T-------------NIEIDRIFLLFTVLPAIQLLSCGL-VKENRVSTKVLKEFSSSNGYHQVNGN 221 (493)
Q Consensus 161 lg~~i~g~l~-----~-------------~~gw~~~f~~~~~~~~l~~i~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~ 221 (493)
++++++..+. + ..+||.++++..++.++..+..++ .++++. .+
T Consensus 178 l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~~----------------- 239 (462)
T PRK15034 178 VMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-SR----------------- 239 (462)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-cc-----------------
Confidence 6655554322 2 334788777766655555444433 333221 10
Q ss_pred CcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHH
Q 011112 222 ESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFF 301 (493)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 301 (493)
. +.+ +..+.+|+|+.|...++.+
T Consensus 240 -------------------------------~----------------------~~~----~~~~vlk~~~~Wllslly~ 262 (462)
T PRK15034 240 -------------------------------A----------------------SIA----DQLPVLQRLHLWLLSLLYL 262 (462)
T ss_pred -------------------------------c----------------------CHH----HHHHHhCCCchhHHHHHHH
Confidence 0 112 3445789999998777666
Q ss_pred HHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecc
Q 011112 302 LAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRM 381 (493)
Q Consensus 302 l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~ 381 (493)
+.+..+.+....+++|.++.+ +............+...+..+++|++.||+|.++.+.++.+.+.+............
T Consensus 263 ~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 263 ATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 655444444434455655433 333222223445566777788999999999999999888876666543222221100
Q ss_pred ccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCC---------------------CchHHHHHHHHHHHhhhhh
Q 011112 382 NLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPP---------------------GIEGTLFALFMSISNFGST 440 (493)
Q Consensus 382 ~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~~gt~~gl~~~~~~lg~~ 440 (493)
...+...+.. ......++.++.....+-++.++.|+ ++.|...|+....+.+|+.
T Consensus 341 ---~~~~~~~~~~-~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf 416 (462)
T PRK15034 341 ---GSGNFIAFYA-VFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGF 416 (462)
T ss_pred ---cccHHHHHHH-HHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccc
Confidence 0001011111 01111122222222334445555553 2577888888888888888
Q ss_pred hhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhh
Q 011112 441 VGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIA 479 (493)
Q Consensus 441 ~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (493)
+-|.+-|...+..| ++..-++.+..+.++|++-.+
T Consensus 417 ~~p~~~g~~~~~~g----~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 417 FIPQAFGMSLNMTG----SPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred hhhHHHHHHHHHcC----CcHHHHHHHHHHHHHHHHHHH
Confidence 88877667777644 344334444444444443333
No 80
>PRK11462 putative transporter; Provisional
Probab=99.90 E-value=8.8e-21 Score=198.40 Aligned_cols=349 Identities=15% Similarity=0.095 Sum_probs=222.3
Q ss_pred HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch-
Q 011112 27 SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR- 104 (493)
Q Consensus 27 ~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~- 104 (493)
.+....+..++.+..|+++..+|.+..+.-+--++ +|+.|.++||.+.|+.|||||++.+.+...++..++...|+.+
T Consensus 26 ~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~ 105 (460)
T PRK11462 26 DNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSM 105 (460)
T ss_pred HHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCc
Confidence 36667778888999999999999988777666666 8999999999998877999999999888888877766555321
Q ss_pred -hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-------ccHH
Q 011112 105 -SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN-------IEID 176 (493)
Q Consensus 105 -~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~-------~gw~ 176 (493)
.....+.+..++..++.....+++.++.+|+++ +++||.+..++...+.++|..+++.+...+.+. .+|+
T Consensus 106 ~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~--d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~ 183 (460)
T PRK11462 106 NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITN--DPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQ 183 (460)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 123334555556688999999999999999997 479999999999999999988887776655433 3577
Q ss_pred HHHHHHHHHHHHHHHHhh-ccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhh
Q 011112 177 RIFLLFTVLPAIQLLSCG-LVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMF 255 (493)
Q Consensus 177 ~~f~~~~~~~~l~~i~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
....+.+++.++....++ ..||++++++ + + .
T Consensus 184 ~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-----------------------------~----------~-------~-- 215 (460)
T PRK11462 184 GGIAVLSVVAFMMLAFCFFTTKERVEAPP-----------------------------T----------T-------T-- 215 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhcceeccCCCc-----------------------------c----------C-------C--
Confidence 766666655544443333 3444322110 0 0 0
Q ss_pred hhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHH
Q 011112 256 KIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVV 335 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~ 335 (493)
+.++ .+...++||.++..+...++.........+...+|.+..+|.+ ...+.....
T Consensus 216 --------------------~~~~---~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~ 271 (460)
T PRK11462 216 --------------------SMRE---DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTT 271 (460)
T ss_pred --------------------CHHH---HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHH
Confidence 1222 2345567777655443333322222222223344444445543 334555566
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILS 415 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 415 (493)
..++.+++.++++++.||.++|+.+..+..+..+..+. ..+.... +...+.+ ..++.............+++
T Consensus 272 ~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~-~~~l~g~~~~~~~~l~~~m~ 343 (460)
T PRK11462 272 YCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLA-MFFVPMQ------ASITMFV-FIFVIGVLHQLVTPIQWVMM 343 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHHhchh------HHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 77788889999999999999888876554443332222 1111100 1111111 11111111111111112334
Q ss_pred hhcCC-------CCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCC
Q 011112 416 GQLCP-------PGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISS 457 (493)
Q Consensus 416 ~~~~p-------~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~ 457 (493)
.+..+ .+.+|..++..++..++|.++++.++|.+.+..|+..
T Consensus 344 ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy~~ 392 (460)
T PRK11462 344 SDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA 392 (460)
T ss_pred HHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 44333 6778888999999999999999999999999878853
No 81
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=1.2e-21 Score=205.87 Aligned_cols=263 Identities=11% Similarity=-0.014 Sum_probs=171.1
Q ss_pred HHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhh
Q 011112 21 FTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGL 99 (493)
Q Consensus 21 f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~ 99 (493)
+...+......+..+.+.+++|+|.++.++..+.+.+++.+ +++.|+++||+ +||+.+..+.++..++..++++
T Consensus 46 ~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----G~r~~~~~~~~~~~~~~~~~~~ 120 (476)
T PLN00028 46 FTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-----GPRYGSAFLLMLTAPAVFCMSL 120 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CChHHHHHHHHHHHHHHHHHHH
Confidence 33444333334445566888999999999988888888877 68999999995 5667777888888887777776
Q ss_pred cccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------
Q 011112 100 NAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT-------- 171 (493)
Q Consensus 100 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~-------- 171 (493)
.+ +.+.+++.|++.|++.+.. ++....+.|.. |+++||++.|+.....++|..+++.+.+.+..
T Consensus 121 ~~----s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~---~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 121 VS----SATGFIAVRFFIGFSLATF-VSCQYWMSTMF---NGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred hc----CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhc---ChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 64 4567778899999887754 34556677777 45899999999988777787777666654422
Q ss_pred -cccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhh
Q 011112 172 -NIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQ 250 (493)
Q Consensus 172 -~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
..|||+.|++.+++.++..+..++.++++++...+ +.+ + +. + . ++
T Consensus 193 ~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~-------~~~---~-------~~----~-------~-~~----- 238 (476)
T PLN00028 193 SFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR-------ELK---K-------SG----T-------M-PK----- 238 (476)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh-------hHH---h-------cC----c-------c-cc-----
Confidence 25899999998887776665554444332211000 000 0 00 0 0 00
Q ss_pred hhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 251 KKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
. +.. +.+++.+++++.|...+..++............+.|+.+..|++..+.+
T Consensus 239 --~----------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~ 291 (476)
T PLN00028 239 --D----------------------SFS---KVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAG 291 (476)
T ss_pred --c----------------------cHH---HHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHH
Confidence 0 111 1244556777766544332221211111222234555566899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChh
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLR 357 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r 357 (493)
.+.....++.+++.++.|++.||+++|
T Consensus 292 ~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 292 AIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 887778888888888888988887654
No 82
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=9.3e-21 Score=193.57 Aligned_cols=382 Identities=19% Similarity=0.236 Sum_probs=236.0
Q ss_pred HHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHH
Q 011112 17 CLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPW 94 (493)
Q Consensus 17 ~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~ 94 (493)
...||++-+. +...+..+.|+++ .|.|.+|+|.+.+...+...+ .|+||.++||. .++|+.+.+..++..+..
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~----~~~~~~l~~~~l~~~~~~ 82 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRF----GSAKRILALLSLLSALAL 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHh----hhHHHHHHHHHHHHHHHH
Confidence 3445554443 3444556778876 799999999999888887777 57999999995 356777777666666655
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH-HHHhhccc
Q 011112 95 LILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL-GGYALTNI 173 (493)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i-~g~l~~~~ 173 (493)
+.....+ +++.+++..++..+......+..|++..+..++ +.++.|+ ...++++|.+++... ++.+....
T Consensus 83 ~~~~~~~----~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~-~~~~YG~----iRlwGSiGf~~~~~~~~~~~~~~~ 153 (400)
T PF03825_consen 83 LLLAFSS----SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD-RGKDYGR----IRLWGSIGFIVAALAFGGLLGGYL 153 (400)
T ss_pred HHHHHhc----cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc-ccCCCCc----chhhhhHHHHHHHHHHHHHHHhhh
Confidence 5444433 455566666666777777778889998887753 3344444 444556666655433 23333222
Q ss_pred ---cHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhh
Q 011112 174 ---EIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQ 250 (493)
Q Consensus 174 ---gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
+....+++.+...++.....+.+|+++++++.+ + + . +
T Consensus 154 ~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~---------~-----------~-------------~--~----- 193 (400)
T PF03825_consen 154 GISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAK---------E-----------S-------------V--K----- 193 (400)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhCCCCccccccC---------C-----------C-------------c--c-----
Confidence 233456666655544444556677665322100 0 0 0 0
Q ss_pred hhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH
Q 011112 251 KKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG 330 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g 330 (493)
++..++.++++|||++...++..++........+...+.|+++.-|.+.+..|
T Consensus 194 ---------------------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g 246 (400)
T PF03825_consen 194 ---------------------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIG 246 (400)
T ss_pred ---------------------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHH
Confidence 00011345678999987766665554433332233334455553337878888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeee---hhHHHHHHHHhh
Q 011112 331 TARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLY---GSALVDAVNQFK 407 (493)
Q Consensus 331 l~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~---~~~~~~~~~~~~ 407 (493)
....++.++++..-...+|+.+|++.++++.++.+...+=..+..... .|....+.. ...+++.+.+..
T Consensus 247 ~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~--------~~~~~~~~~~~l~q~lhG~tf~~~ 318 (400)
T PF03825_consen 247 ILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS--------DPWPFIVALQLLGQLLHGLTFGLF 318 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc--------CCcHHHHHHHHHHHhhhhHHHHHH
Confidence 877788899999999999999999999999998877655321111110 011111111 112355555666
Q ss_pred HhHHHHHHhhcCCCCchHHHHHHHHHHH-hhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhh-hhhhhccc
Q 011112 408 FMPFLILSGQLCPPGIEGTLFALFMSIS-NFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIP-IAFLFLIP 485 (493)
Q Consensus 408 ~~~~~~~~~~~~p~~~~gt~~gl~~~~~-~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 485 (493)
+.....++.+.+|++.|++++++++.+. .+|..+|+.++|.+.|.+|... -++ +...+.+.+.+.++. ++++.+-+
T Consensus 319 ~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~-~~~-~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 319 HAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG-MFD-WSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh-hhh-HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6667789999999999999999999865 5899999999999999988642 122 223333444433333 34444555
Q ss_pred CCCC
Q 011112 486 KGAT 489 (493)
Q Consensus 486 ~~~~ 489 (493)
|++|
T Consensus 397 ~~~~ 400 (400)
T PF03825_consen 397 PKHN 400 (400)
T ss_pred CCCC
Confidence 5544
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.89 E-value=4.1e-21 Score=222.86 Aligned_cols=363 Identities=13% Similarity=0.054 Sum_probs=232.3
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHh--hHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPS--ASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~--~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~i 83 (493)
++.+....+.+..++..+.. .....+.+++.++++.+.+ ..++..+++.+++.+ +|++|+++||+ +||+.+
T Consensus 6 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-----grk~~l 80 (1146)
T PRK08633 6 LKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-----SKNRVI 80 (1146)
T ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-----cHHHHH
Confidence 33334443444555555432 4444445555556666543 468888888888877 89999999995 677787
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS 163 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~ 163 (493)
+.+.++.++..+++.+... ..+++.+++.|+++|++.+...++..+++.|.++ +++|++++|+...+.++|.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~r~~~~~~~~~~~~ig~~lg~ 156 (1146)
T PRK08633 81 RIVKLFEVGLTLLIVLAYY-LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVG---KENLSRANGLLEAFTIVAILAGT 156 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcC---cccchhhhhHHHHHHHHHHHHHH
Confidence 7776655554443332211 1247788999999999999999999999999984 48999999999999999999999
Q ss_pred HHHHHhhcc---------ccHHHHHHHHHHHHHHHH-HHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccc
Q 011112 164 LLGGYALTN---------IEIDRIFLLFTVLPAIQL-LSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSE 233 (493)
Q Consensus 164 ~i~g~l~~~---------~gw~~~f~~~~~~~~l~~-i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (493)
++++++.+. .+|++.+.+..+...+.. +..+.+||.++....+. ++ .
T Consensus 157 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------------~----- 213 (1146)
T PRK08633 157 ALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF------DK------------K----- 213 (1146)
T ss_pred HHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc------cc------------c-----
Confidence 999999875 234444444333332222 33345666543321000 00 0
Q ss_pred cchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcc
Q 011112 234 EKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTV 313 (493)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 313 (493)
+ .+ ..++....+..++++|.++..++..++.+.........
T Consensus 214 ~---------~~------------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (1146)
T PRK08633 214 K---------YL------------------------------FPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQAN 254 (1146)
T ss_pred c---------cc------------------------------cHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00 01111123344567777665443333222222222233
Q ss_pred eeeeeeccCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceE
Q 011112 314 MFYYQTEILNLEAS-FLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTM 392 (493)
Q Consensus 314 ~~~~~~~~~g~s~~-~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~ 392 (493)
++.|..+.+|++.. ..|++.....++.++++++.+++.||.++++.+.++.++..++.+. +... .+.+.
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~ 324 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFL-LPTA---------PSLAS 324 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHH-HHHh---------hhHHH
Confidence 45566667899988 8899888888999999999999999999888877776666554322 1111 11111
Q ss_pred eeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 393 VLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
.+...++..+..+....+..+++.+..|++.+|+++|+.+++.++|..+++.+++.+..
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 325 VLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122233333344455667888999999999999999999999999888888776654
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.89 E-value=4.1e-20 Score=190.58 Aligned_cols=351 Identities=13% Similarity=0.091 Sum_probs=228.7
Q ss_pred HHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSL 91 (493)
Q Consensus 13 ~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~ 91 (493)
++.++..+|..|+..-...++.|.+++++|.|+.+.|+..+.+.+++.+ +++.|++.||+ +||+.++.+..+.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-----G~r~~~~~g~~l~~ 79 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-----SYKAGILLGLFLYA 79 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHH
Confidence 3446777888888753334445666889999999999999999999887 78999999995 67888899998888
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011112 92 VPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT 171 (493)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~ 171 (493)
++.+++..... .++++.+++.|++.|+|.+..++..+.++.+..+ +++|++..++.+...++|..+|+.+++.+..
T Consensus 80 ~g~~l~~~~~~-~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~ 155 (410)
T TIGR00885 80 LGAFLFWPAAE-IMNYTLFLVGLFILTAGLGFLETAANPYILVMGP---ESTATRRLNLAQSFNPFGSIIGMVVAQQLIL 155 (410)
T ss_pred HHHHHHHHHHh-hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCC---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88776543321 1357788899999999999999999999988874 4778999999999999999999999987742
Q ss_pred --------------------------cccHHHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCccc
Q 011112 172 --------------------------NIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESIL 225 (493)
Q Consensus 172 --------------------------~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (493)
..+||++|++.+++.++..+...+.++++.+++ + +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~---~-----~----------- 216 (410)
T TIGR00885 156 SNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHS---D-----A----------- 216 (410)
T ss_pred cCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc---c-----c-----------
Confidence 246999999888765555443333332211110 0 0
Q ss_pred CCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHh
Q 011112 226 DDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHV 305 (493)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 305 (493)
++ + +.++ +..+.+|+|+++...+..|+...
T Consensus 217 --~~----~-----------------------------------------~~~~---~~~~~~~~~~~~~~~l~~f~yvg 246 (410)
T TIGR00885 217 --KQ----I-----------------------------------------SFSA---SLSRLARIRHYREGVIAQFFYVG 246 (410)
T ss_pred --cc----c-----------------------------------------cchh---hHHHHHhChhHHHHHHHHHHHHH
Confidence 00 0 0000 11233566666554444444222
Q ss_pred cccCCCcceeeeeec-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccc
Q 011112 306 AVPNLSTVMFYYQTE-ILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLT 384 (493)
Q Consensus 306 ~~~~~~~~~~~~~~~-~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~ 384 (493)
......+..+.|..+ ..+.+....+...........+|.++++++.||.++|+.+.+..++..+..++.. ..
T Consensus 247 ~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~-~~------ 319 (410)
T TIGR00885 247 VQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSI-FA------ 319 (410)
T ss_pred HHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-Hc------
Confidence 221222223344433 2344554445444445567788999999999999999988877776665433221 11
Q ss_pred cCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 385 VGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 385 ~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
+..... ....+...+....+...++...+..+++.+....++..++ +|+.+.|.+.|.+.|..|
T Consensus 320 ---~~~~~~-~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~ 383 (410)
T TIGR00885 320 ---GGHVGL-YCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKE 383 (410)
T ss_pred ---CChHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhc
Confidence 111101 1111222222233433467788888887765566665544 899999999999999654
No 85
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.88 E-value=3.9e-21 Score=194.35 Aligned_cols=325 Identities=14% Similarity=0.100 Sum_probs=209.9
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
.++.|.+++++|+|.++.|+..+++.+++.+ +++.|+++||+ +||+.++.+.+...++...+ ..+ +.+.
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~-~~~----~~~~ 89 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-----GEERSVAAGLLLIAAGILIR-SAP----GTAL 89 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----CchHHHHHHHHHHHHHHHHH-Hhc----cHHH
Confidence 3445566888999999999999999999887 79999999995 56777778877776666655 333 4567
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc--cHHHHHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI--EIDRIFLLFTVLPA 187 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~--gw~~~f~~~~~~~~ 187 (493)
+++.|++.+++.+...+...+++.|.. +++|+++.+......++|..+++.+++.+.++. +||+.|...++..+
T Consensus 90 l~~~~~~~g~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 90 LFAGTALIGVGIAIINVLLPSLIKRDF----PQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHhC----cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 788999999998887777777776655 268999999999999999999999999988764 39999887664433
Q ss_pred HHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCC
Q 011112 188 IQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNN 267 (493)
Q Consensus 188 l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (493)
+.. ..++||.+++++. + + + +. + .
T Consensus 166 ~~~--~~~~~~~~~~~~~--------~-~-----~-----~~---------------~-------~-------------- 188 (355)
T TIGR00896 166 LAL--LAWIPQVRRRVAA--------N-Q-----T-----TT---------------R-------L-------------- 188 (355)
T ss_pred HHH--HHHhhhhccccCC--------C-C-----C-----CC---------------C-------C--------------
Confidence 222 2234544322100 0 0 0 00 0 0
Q ss_pred chhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011112 268 PLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTY 347 (493)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~ 347 (493)
. .++.+|+|..+...+..++............+.|.++ .|+|..+.+.......++.+++.++.
T Consensus 189 --------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~ 252 (355)
T TIGR00896 189 --------T-------PVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLI 252 (355)
T ss_pred --------C-------CchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 0 1122345555443332222122211122223455554 69999999998888889999999999
Q ss_pred HHHHhcCC-hhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHH-HHHHhhcC-CCCch
Q 011112 348 NGYLKRLK-LRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPF-LILSGQLC-PPGIE 424 (493)
Q Consensus 348 ~~~~~~~~-~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~-p~~~~ 424 (493)
+++.||.+ +|+.+..+.++..++.+. +.... .... +. ...+.....+ ...|. .+.+.+.. +++.+
T Consensus 253 g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~-~~-~~~l~g~~~g-~~~~~~~~~~~~~~~~~~~~ 320 (355)
T TIGR00896 253 PALARRVKDQRGIVAVLAVLQLVGLCG-LLFAP--------MHGL-WA-WALVLGLGQG-GAFPLALTLIGLRSRQAAQA 320 (355)
T ss_pred HHHHhhhccchHHHHHHHHHHHHHHHH-HHHhh--------hhHH-HH-HHHHHHHhhh-hHhHHHHHHHHHhccCHHHH
Confidence 99999995 455555555554443221 11111 0111 11 1112222222 22232 34444444 45677
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 425 GTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 425 gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
++.+++.+++.+++..++|.+.|.+.|+.|
T Consensus 321 g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 321 AALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999876
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=3.6e-20 Score=194.53 Aligned_cols=171 Identities=13% Similarity=0.112 Sum_probs=138.0
Q ss_pred hhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhh--hCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 10 VSFLWLICLIYFTQGFR-SFVWTAVSYQLKDK--LKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 10 ~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~--~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.++.+....+...+. +.....++.|++++ +|.|..+.|...+.+.+...+ .+++|+++||+ .+||+.++.
T Consensus 9 p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~----~G~~~~l~~ 84 (475)
T TIGR00924 9 PKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRV----WGTKKTMVL 84 (475)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhh----cchHHHHHH
Confidence 34455555666776665 35566677888877 999999999999998877766 67899999982 368888899
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.++.+++.+++++.+ +.+.+.+.|.+.++|.+...+...+++.|..+++++++|+++.++++.+.++|..+|+.+
T Consensus 85 ~~~~~~~g~~~~~~~~----~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l 160 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSI----YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL 160 (475)
T ss_pred HHHHHHHHHHHHHhcc----cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH
Confidence 9999888888777754 345667788889999988888899999999875433568999999999999999999999
Q ss_pred HHHhhccccHHHHHHHHHHHHHH
Q 011112 166 GGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 166 ~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
++++.++.|||+.|++.++..++
T Consensus 161 ~g~l~~~~g~~~~f~~~~~~~~~ 183 (475)
T TIGR00924 161 AGVIAENYGYHVGFNLAAVGMVI 183 (475)
T ss_pred HHHHHHhcChHHHHHHHHHHHHH
Confidence 99999999999999987754333
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=3.2e-20 Score=195.22 Aligned_cols=168 Identities=10% Similarity=0.161 Sum_probs=136.4
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHH-hhHhhhhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAF-FPWSIKPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~-l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+++-++.++...+...+.. .....+..|+++++|.+.++.++..+.+. +.+...++.|+++||+ .+||+.++.+
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~----~G~r~~~~~g 87 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHL----LGTKRTIVLG 87 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhc----cchHHHHHHH
Confidence 5666666666667777764 56667778889999999999999888776 4555578999999983 3788899999
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
.+++.++.+.+++.++ ....+++.|.++++|.+...+...+++.|..+++ .++|++++++++...++|..+||.++
T Consensus 88 ~~~~~~g~~~~~~~~~---~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~-~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 88 AIVLAIGYFMTGMSLL---KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPK-DPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHHHHHHHHHHhcc---chhHHHHHHHHHHhccccccCCHHHHHHHhcCCC-chhhhcchhHHHHHHHHHHHHHHHHH
Confidence 9999999888887642 1223457889999999988888899999999652 24678899999999999999999999
Q ss_pred HHhhccccHHHHHHHHHH
Q 011112 167 GYALTNIEIDRIFLLFTV 184 (493)
Q Consensus 167 g~l~~~~gw~~~f~~~~~ 184 (493)
+++.++.|||+.|++.++
T Consensus 164 g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 164 PVIADKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHhhChHHHHHHHHH
Confidence 999999999999998654
No 88
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.87 E-value=1.9e-19 Score=187.42 Aligned_cols=363 Identities=17% Similarity=0.235 Sum_probs=242.1
Q ss_pred HHHHHHHHhhHh-hhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHH
Q 011112 49 QFVSAVAFFPWS-IKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVV 127 (493)
Q Consensus 49 g~~~s~~~l~~~-~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 127 (493)
+...++..+.-+ +.|+.|.++|+ +.+||+++.....++.++...+.+.+. ..++...++.++..++.....+.
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~----~~~Rk~~l~~~~~~~~~~~~~l~~v~~--~~~~~~~~l~iia~v~~~~~~vf 146 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADY----GGRRKRFLLIFTLLGVLATALLWFVSP--GQWWLALVLFIIANVGYEASNVF 146 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc----cccchHHHHHHHHHHHHHHHHHHHhCc--chHHHHHHHHHHHHHHHHHHHHH
Confidence 444455544444 48999999997 357888888888888877777777632 34556667777888999999999
Q ss_pred HHHHHHHHhhhhch-----------------------hcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------cccHH
Q 011112 128 VDAMIAEAAKSERA-----------------------AFAGDLQSLSWLAMAFGGICGSLLGGYALT--------NIEID 176 (493)
Q Consensus 128 ~~ali~~~~~~~~~-----------------------~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~--------~~gw~ 176 (493)
++++..|+.+++|. .+|++..+..+...++|+++..++.-.+.. ..+.|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 99999999975322 013899999999999999987777655432 12358
Q ss_pred HHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhh
Q 011112 177 RIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMF 255 (493)
Q Consensus 177 ~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
..+.+.++.-++..+.. +++||.+++...+ .. ++
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~---------------------~~----~~-------------------- 261 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLP---------------------SG----SS-------------------- 261 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC---------------------cc----hh--------------------
Confidence 88888887777666654 4577766532100 00 00
Q ss_pred hhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHH
Q 011112 256 KIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVV 335 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~ 335 (493)
....++|+..+.+++.-|.|.+...++..++..-...........|..+++|+|..+...+.++
T Consensus 262 ----------------~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~ 325 (477)
T PF11700_consen 262 ----------------YLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLV 325 (477)
T ss_pred ----------------HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHH
Confidence 0111344444455555566777666555454343444344444567777899999999888888
Q ss_pred HHHHHHHHHHHHHHHHhcCChh--HHHHHHHHHHHHHhhhhhhheeccccccCccCce-EeeehhHHHHHHHHhhHhHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLR--RILLLTQVGLSILSFLDIVLVSRMNLTVGISDKT-MVLYGSALVDAVNQFKFMPFL 412 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r--~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~-~~l~~~~~~~~~~~~~~~~~~ 412 (493)
..+.+++|+++++++.||+|.| +++..+.++..+..+..+.-.. ....|....+ +++.. .+.....+......-
T Consensus 326 ~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~--~~~~g~~~~~~f~~~a-~~~G~~~G~~qs~sR 402 (477)
T PF11700_consen 326 VQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFW--PSFFGLKSPWEFWVLA-VLIGLFMGGIQSASR 402 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhh--hcccCcccHHHHHHHH-HHHHHHhhhHHHHHH
Confidence 9999999999999999999999 8887777666443322221000 1111222222 33221 222222222222234
Q ss_pred HHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCCC
Q 011112 413 ILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKGA 488 (493)
Q Consensus 413 ~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 488 (493)
++.+++.|+++++..+|++...++.+..+||.+.|.+.+..|- .+..+....+..+++++++..++.++
T Consensus 403 s~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~-------~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 403 SLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS-------QRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------chhHHHHHHHHHHHHHHHHhhccchh
Confidence 6799999999999999999999999999999999999998752 23455566666777877777777544
No 89
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=6.9e-21 Score=187.83 Aligned_cols=363 Identities=15% Similarity=0.139 Sum_probs=248.2
Q ss_pred hhhhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHh-hhhhhhhcccccccCCCCchhH
Q 011112 5 KNVFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWS-IKPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 5 ~~~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~-~~~~~G~lsDr~~~~g~~rr~~ 82 (493)
.|.-+++.++ +...+|.-+|.. ....++.+.+++++|+|+.|.+++.++-.+.-+ ++.+.|.+.||+ .+| ++
T Consensus 8 ~k~~~~~~L~-~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf----GgR-~~ 81 (417)
T COG2223 8 GKRIARRNLW-LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF----GGR-KW 81 (417)
T ss_pred cccchhHHHH-HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc----Cch-HH
Confidence 3455677777 778888888876 667788888899999999999998888776544 489999999996 244 45
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 83 LVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 83 ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
.+.+.++..+-++..+++.+.+ +++.+++++.+.|++.+... ....++++.. |+++.|.++|+.. +.|+|..+.
T Consensus 82 ~~~s~~l~~IP~~~~~~a~~~~-~~~~ll~~gll~G~~GasFa-v~m~~~s~~f---P~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 82 TILSMLLLLIPCLGLAFAVTYP-STWQLLVIGLLLGLAGASFA-VGMPNASFFF---PKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred HHHHHHHHHHHHHHHHHHccCC-chHHHHHHHHHHhcccceeh-cccccccccC---ChhhhhHHHHHhc-cccccHHHH
Confidence 5677777777777777765443 44788899989898776554 4556666666 6799999999999 999999999
Q ss_pred HHHHHHhhcccc---HHHHHHHHHHHHHHHHHH-hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhh
Q 011112 163 SLLGGYALTNIE---IDRIFLLFTVLPAIQLLS-CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNI 238 (493)
Q Consensus 163 ~~i~g~l~~~~g---w~~~f~~~~~~~~l~~i~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (493)
..++-.+....+ ||.+..+..+..++..+. ++.+++.+....++ +
T Consensus 156 q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~---------------------------~---- 204 (417)
T COG2223 156 QLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV---------------------------K---- 204 (417)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc---------------------------c----
Confidence 999998888888 998888777665555543 44555544321100 0
Q ss_pred hhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeee
Q 011112 239 STKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQ 318 (493)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (493)
+.+. .+++.++++|+.|...++.+..+..+.+.....+.|+
T Consensus 205 -------------------------------------~~~~--~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~ 245 (417)
T COG2223 205 -------------------------------------PQLP--AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYL 245 (417)
T ss_pred -------------------------------------ccch--hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 1234456788888887766655555555555567788
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceE-eeehh
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTM-VLYGS 397 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~-~l~~~ 397 (493)
++++|.++.+.|...........+.-+.+|+++||+|.+|........+.+...+....... .+...... .....
T Consensus 246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~ 321 (417)
T COG2223 246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTG----FGHGGSFVVFVAVF 321 (417)
T ss_pred HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccc----cccCcchHHHHHHH
Confidence 88899999999988666666666778899999999999999888888777764332211110 01111110 11111
Q ss_pred HHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 398 ALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
.....+.+..--..+.++..+.|+ +.|...|+...++++|+..-|..-+...+..|
T Consensus 322 l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 322 LALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred HHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 111112222222233344555554 77889999999999998887888787877755
No 90
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.87 E-value=1.1e-18 Score=172.86 Aligned_cols=373 Identities=17% Similarity=0.173 Sum_probs=249.3
Q ss_pred HhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccc-cCCCCchhHHHHHHHHHHHHHHHHhhc----cc------chhh
Q 011112 38 KDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIP-IKGRKRIPYLVISTVLSLVPWLILGLN----AF------FRSS 106 (493)
Q Consensus 38 ~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~-~~g~~rr~~ii~~~~l~~~~~~~~~~~----~~------~~~~ 106 (493)
..|++++..-.+...++..+..-.+|.+|..||+.| .+|+||.||+..|..+.+.+..+..+. .+ .+..
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 456999999888888777766667889999999999 889999999999998877755444322 11 0112
Q ss_pred HH--HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Q 011112 107 TW--HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTV 184 (493)
Q Consensus 107 ~~--~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~ 184 (493)
.+ ...+.+.+.|+|.....++..+++.|.++ +++|+++.++.+.+..+|.+++.++.|.+.+.++......+.-.
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~---e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAP---EERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCC---HhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 22 23345556788888888999999999984 59999999999999999999999999999887764333222222
Q ss_pred HHHHH---HHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhcc
Q 011112 185 LPAIQ---LLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQ 261 (493)
Q Consensus 185 ~~~l~---~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (493)
..++. .+...+-.|++++...+. .++ | + .
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~~~------------------~~~-----~----------~-------~-------- 195 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRAAA------------------AER-----P----------R-------P-------- 195 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCcccccC------------------CCC-----C----------C-------c--------
Confidence 22222 223334445544331000 000 0 0 1
Q ss_pred CCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHH
Q 011112 262 IPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLM 341 (493)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~ 341 (493)
++++.++++ .++|+..+...+.++....+..-...+-+|--+.+|+|..+...++.....+.+
T Consensus 196 --------------~f~~a~~~~---~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L 258 (403)
T PF03209_consen 196 --------------PFREAWRQV---WASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTL 258 (403)
T ss_pred --------------cHHHHHHHH---HhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHH
Confidence 344444444 367877777777666555554444445677778899999999999898999999
Q ss_pred HHHHHHHHHHh-cCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCC
Q 011112 342 LGTYTYNGYLK-RLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCP 420 (493)
Q Consensus 342 l~~~~~~~~~~-~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p 420 (493)
+|....+++.. |.+++++-..+.....++.. .+.+... ..+.+..-....+..+.++.......+.++++.+
T Consensus 259 ~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~-lii~a~~------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~ 331 (403)
T PF03209_consen 259 LGMLLAGFLLSRRLGKKRTAALGCLLGALAFA-LIILAGP------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTS 331 (403)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH-HHHHHHh------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCC
Confidence 99988888876 56777766666555555432 2222111 1122222122233444445555556678899999
Q ss_pred CCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC-CC-CCccchHHHHHHHHhhhhhhhhhhhccc
Q 011112 421 PGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI-SS-GSFDNLLLGISIQALCTFIPIAFLFLIP 485 (493)
Q Consensus 421 ~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (493)
++..|+.+|++...+.++..++...||.+.|.... .. .....|...|.+-++..+++++.+.-+.
T Consensus 332 ~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~ 398 (403)
T PF03209_consen 332 AGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRLD 398 (403)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999985322 11 2334566667777777777766664333
No 91
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=5.4e-22 Score=192.96 Aligned_cols=328 Identities=16% Similarity=0.174 Sum_probs=228.4
Q ss_pred hhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 011112 40 KLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQN 118 (493)
Q Consensus 40 ~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 118 (493)
+.+-+.+++|++.+...+...+ +|+.|++.||+ ++|--++.|..+...+..++++.+ +++.+++.|.+||
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-----Gy~ipm~~Gl~vmf~sTilFafg~----sy~~l~vAR~LQg 170 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-----GYKIPMVAGLFVMFLSTILFAFGN----SYPMLFVARSLQG 170 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-----ccccHHHHHHHHHHHHHHHHHHcc----hhHHHHHHHHHhh
Confidence 4566778899999888776654 99999999996 567777889888888888888875 7889999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhhcccc
Q 011112 119 LGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVKE 198 (493)
Q Consensus 119 ~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e 198 (493)
+|.+..+++..++++|.+++ .++|++++|....+.++|.++||++||.+++..|.+.+|.+.+.+.++-..+-+++=|
T Consensus 171 vgsA~~~tsglamlAd~f~~--d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPE--DNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hhHHHHHhhhHHHHHHHccc--chhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 99999999999999999986 3889999999999999999999999999999999999999999887776666555433
Q ss_pred c-cccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhH
Q 011112 199 N-RVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSL 277 (493)
Q Consensus 199 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (493)
+ +.++.. + + + +
T Consensus 249 p~~~~~~~--------~-------------------~----------~-------~------------------------ 260 (464)
T KOG3764|consen 249 PTEMDPDS--------T-------------------E----------Q-------G------------------------ 260 (464)
T ss_pred ccccCccc--------c-------------------c----------c-------C------------------------
Confidence 3 222100 0 0 0 0
Q ss_pred HHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChh
Q 011112 278 KAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLR 357 (493)
Q Consensus 278 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r 357 (493)
.++|+++++|.++....-.-..+.......+..+.|+.+.+.-+.-+.|+..+...+...+++.+.+.+.+|++..
T Consensus 261 ----~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~ 336 (464)
T KOG3764|consen 261 ----TPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL 336 (464)
T ss_pred ----ccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCch
Confidence 0355677788776543221111333333444456677676663444789988888899999999999999999955
Q ss_pred HHHHHHHHHHHHHhhhhhh-heeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCC---chHHHHHHHHH
Q 011112 358 RILLLTQVGLSILSFLDIV-LVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPG---IEGTLFALFMS 433 (493)
Q Consensus 358 ~~l~~~~~~~~~~~l~~~~-~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~gt~~gl~~~ 433 (493)
+.+.....+...+.....+ +.+.+ ...+.-.....+.......+++|.+.+.-+..... .-|..+++...
T Consensus 337 ~wl~~~~gl~~~G~~~~~iP~~~~~------~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~ 410 (464)
T KOG3764|consen 337 RWLLSLGGLATVGVSSGPIPFATSI------AQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADA 410 (464)
T ss_pred hHHHHHHHHHHHHHHhchhHhhhhH------HHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHH
Confidence 5444333222222111111 11100 11111111112222222345677765544443333 56788899998
Q ss_pred HHhhhhhhhHhHHHHhHHhhcCC
Q 011112 434 ISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 434 ~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
...+|..+||.++|.+.+.+|+.
T Consensus 411 a~sla~a~GP~~gg~iv~~iGF~ 433 (464)
T KOG3764|consen 411 AFSLAYAIGPTFGGSLVEAIGFE 433 (464)
T ss_pred HHHHhhhccccccchheeehhHH
Confidence 89999999999999999988764
No 92
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.5e-22 Score=200.98 Aligned_cols=176 Identities=17% Similarity=0.239 Sum_probs=150.6
Q ss_pred HHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHH
Q 011112 15 LICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLV 92 (493)
Q Consensus 15 ~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~ 92 (493)
+++....++..+ +.+-. ..+-+++.+|.+++..|.+.+.+.+.+.+ +|++|.++|| +.||.++.+|..++.+
T Consensus 37 il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-----yNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-----YNRKRVIAVGIFIWTL 110 (493)
T ss_pred HHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-----cCcceEEeeHHHHHHH
Confidence 344555666665 33322 34566889999999999999999998877 8999999999 4899999999999999
Q ss_pred HHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011112 93 PWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN 172 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~ 172 (493)
+.+.+++.. .+|++.++|.+.|+|.+...+..+.+++|.++ ..+|++++++++.+..+|..+|.++|..+.++
T Consensus 111 Av~~~~fs~----~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~---~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 111 AVFASGFSN----HFWQVLLCRGFVGIGEASYSPIAPSLIADSFP---DDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHH----HHHHHHHHHHHhccchhhhcccchhHhhhcCc---chhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 999988873 78999999999999999999999999999995 48999999999999999999999999999987
Q ss_pred cc-HHHHHHHHHHHHHHHHHHh-hccccccccc
Q 011112 173 IE-IDRIFLLFTVLPAIQLLSC-GLVKENRVST 203 (493)
Q Consensus 173 ~g-w~~~f~~~~~~~~l~~i~~-~~~~e~~~~~ 203 (493)
.+ |||.|+..++++++..++. ++++|+++..
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 66 9999999999998887655 5677776543
No 93
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.6e-19 Score=183.65 Aligned_cols=393 Identities=17% Similarity=0.157 Sum_probs=248.1
Q ss_pred HHhhhC--CCHhhHHH----HHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 37 LKDKLK--FSPSASQF----VSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 37 l~~~~g--~s~~~~g~----~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
+.+++| .++++... ..+++.++-.+ +.+.|+++||+ +||.-+..+.++..++.+++.++. ..++++.
T Consensus 45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~-----GRK~~l~~~~~l~~~~~~~~~~s~-~~~~~e~ 118 (485)
T KOG0569|consen 45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF-----GRKNALLLSNLLAVLAALLMGLSK-SAPSFEM 118 (485)
T ss_pred HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cchHHHHHHHHHHHHHHHHHHHHH-HhhhHHH
Confidence 345567 55555444 44556667667 57899999994 677777777777777766665542 2347889
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH-Hh-hccccHHHHHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG-YA-LTNIEIDRIFLLFTVLPA 187 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g-~l-~~~~gw~~~f~~~~~~~~ 187 (493)
+++.|++.|+..+.......-++.|.. |.+.||........+..+|.++|..++. .+ -+...|++.+....++.+
T Consensus 119 li~GR~i~Gl~~gl~~~~~pmyl~E~s---P~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~ 195 (485)
T KOG0569|consen 119 LILGRLIVGLACGLSTGLVPMYLTEIS---PKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPAL 195 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcC---hhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999998 5699999999999999999999977765 33 345669999998888877
Q ss_pred HHHHHhhccccccccch---hhhc-cc-ccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccC
Q 011112 188 IQLLSCGLVKENRVSTK---VLKE-FS-SSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQI 262 (493)
Q Consensus 188 l~~i~~~~~~e~~~~~~---~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (493)
+..+...+.||+|++.- ++++ +. .++.+|.-++ +....+++ .+.+ +++.
T Consensus 196 ~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~-------~~~~~e~~------~~e~------------~~~~- 249 (485)
T KOG0569|consen 196 LQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKED-------VEAEIEEM------LREI------------EEEE- 249 (485)
T ss_pred HHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCc-------chhHHHHH------HHHH------------HHhc-
Confidence 77777788999998762 1111 11 1221110000 00000000 0000 0000
Q ss_pred CCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHH--HHhcccCCCcceeeeee---ccCCCCHHHHHHHHHHHH
Q 011112 263 PEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFL--AHVAVPNLSTVMFYYQT---EILNLEASFLGTARVVGW 337 (493)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~---~~~g~s~~~~gl~~~~~~ 337 (493)
..++.-..++++++||.....+...+. ....+.+.+.. .+|.+ ...|++.++.-......+
T Consensus 250 -------------~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai-~~Yst~i~~~aG~~~~~a~~an~~~g 315 (485)
T KOG0569|consen 250 -------------LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAI-FFYSTSIFKTAGFTPEEAQYANLGIG 315 (485)
T ss_pred -------------cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCccee-HHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 000011135566777765544322111 11222333322 23322 237999988888888888
Q ss_pred HHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceE-e--eehhHHHHHHHHhhHhHH-HH
Q 011112 338 VGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTM-V--LYGSALVDAVNQFKFMPF-LI 413 (493)
Q Consensus 338 ~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~-~--l~~~~~~~~~~~~~~~~~-~~ 413 (493)
...++.++++..+.||.|||++++.+..++.+..++........+ ..+ .+. + ++..++.....+....|. +-
T Consensus 316 ~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~-~~~---~~~~y~~i~~~~~~~~~f~~G~gpi~~f 391 (485)
T KOG0569|consen 316 IVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSN-SFG---SWLSYLCIAAIFLFIISFAIGPGPIPWF 391 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh---hHHHHHHHHHHHHHHHhhhcCCCchhHH
Confidence 888889999999999999999999998888876544333222111 111 111 1 111122222233344455 45
Q ss_pred HHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhh-hhhhhcccCCCCCC
Q 011112 414 LSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIP-IAFLFLIPKGATGV 491 (493)
Q Consensus 414 ~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~ 491 (493)
+.+|++|++.|.++++.....+.+.+.+-...-..+.+.+|- +.++++++.+.+. +.+..++||++++=
T Consensus 392 i~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~---------~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 392 IGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP---------YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 799999999999999999999988888777777777777652 2334444444444 44447999999764
No 94
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=2.5e-20 Score=192.87 Aligned_cols=365 Identities=14% Similarity=0.151 Sum_probs=238.2
Q ss_pred hhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 011112 39 DKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQ 117 (493)
Q Consensus 39 ~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 117 (493)
+++++|.+|-+.+.+.+++++.+ +.+.|+++||+ +-|+.+..+.++.+++.++.=.+.+ ..++.+++.|++|
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-----G~r~v~~~~~~~sa~~t~l~P~aa~--~~~~~~~~~R~lq 138 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-----GARRVFFISGLISALLTLLTPLAAS--IGFYLLLVLRFLQ 138 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-----CchHHHHHHHHHHHHHHHHHHHHHH--hcchhhHHHHHHh
Confidence 36899999999999999999998 57899999996 4556677777777776665543322 2445778999999
Q ss_pred HhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-ccHHHHHHHHHHHHHHHHHHhh-c
Q 011112 118 NLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN-IEIDRIFLLFTVLPAIQLLSCG-L 195 (493)
Q Consensus 118 ~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~-~gw~~~f~~~~~~~~l~~i~~~-~ 195 (493)
|++.+...++...+..... |++||++..++...+..+|.+++..++|++.+. +||+++||+.++++++..++++ +
T Consensus 139 Gl~~g~~~pa~~~i~~~W~---P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWA---PPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHHhHHHhhhhceeeeEC---CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888877666 679999999999999999999999999999998 9999999999999988887765 4
Q ss_pred cccccccchh--hhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHH
Q 011112 196 VKENRVSTKV--LKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQW 273 (493)
Q Consensus 196 ~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (493)
..|+|.+++. +++...+++.+..+ ..++
T Consensus 216 ~~d~P~~h~~is~~El~~I~~~k~~~----------------------~~~~---------------------------- 245 (466)
T KOG2532|consen 216 YSDSPSKHPNISEKELKYIEKGKSEA----------------------HVKK---------------------------- 245 (466)
T ss_pred hcCCcccCCCCCHHHHHHHHhccccc----------------------ccCC----------------------------
Confidence 5555544321 00001111111000 0000
Q ss_pred HhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 011112 274 FHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKR 353 (493)
Q Consensus 274 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~ 353 (493)
. .--+++++++++.+|...+..+..+..........|.|+.+.+|++..+.|++.....+...+..+++|++.||
T Consensus 246 --~---~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~ 320 (466)
T KOG2532|consen 246 --K---PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDR 320 (466)
T ss_pred --C---CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00135567888988876655554333333344455778888999999999999888888888888888888886
Q ss_pred CCh--------hHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchH
Q 011112 354 LKL--------RRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEG 425 (493)
Q Consensus 354 ~~~--------r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 425 (493)
... ||++-..........+ +.+... + -......+....+.....++....... ...+..|++.+
T Consensus 321 l~~~~ls~t~~rkifn~i~~~~~ai~l--~~l~~~-~----~~~~~~a~~~l~~~~~~~g~~~~Gf~~-~~~~~apq~a~ 392 (466)
T KOG2532|consen 321 LTFRILSETTVRKIFNTIAFGGPAVFL--LVLAFT-S----DEHRLLAVILLTIAIGLSGFNISGFYK-NHQDIAPQHAG 392 (466)
T ss_pred HhhccCchHhHHHHHHhHHHHHHHHHH--Heeeec-C----CCcchHHHHHHHHHHHHcccchhhhHh-hhhhccchHHH
Confidence 543 2333222222211111 111111 0 011211111111111222222222221 22232566889
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh
Q 011112 426 TLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 426 t~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (493)
..+|+.+.+..+++.++|.+.|.+.. - .+.+++...+.+.+++.+++-++.
T Consensus 393 ~l~g~~~~~~~~~~~~~P~~vg~~~~-~----~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 393 FVMGIINFVGALAGFIAPLLVGIIVT-D----NTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeEeC-C----CCHHHHHHHHHHHHHHHHHhchhe
Confidence 99999999999999999999888775 1 134556667777777776665443
No 95
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.83 E-value=2e-17 Score=171.46 Aligned_cols=397 Identities=15% Similarity=0.115 Sum_probs=224.1
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch--
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR-- 104 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~-- 104 (493)
+....++||++ ++|.+..+.+.+..+..+...+ +|++|.++||.+.|..|||++++.+.+..+++..++.+.++..
T Consensus 22 l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~ 100 (477)
T TIGR01301 22 LQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHL 100 (477)
T ss_pred HHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhh
Confidence 45555667754 6999999999988777665554 9999999998666656788888777777777777776654310
Q ss_pred --------h---hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh--hc
Q 011112 105 --------S---STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA--LT 171 (493)
Q Consensus 105 --------~---~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l--~~ 171 (493)
. ..+.+++...+..++......+..++++|.+++ +.++++.+.++...+..+|.++|+.+|++. .+
T Consensus 101 ~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~-~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~ 179 (477)
T TIGR01301 101 FGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGG-DARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYK 179 (477)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0 012233444445567777778889999999964 223447899999999999999999999875 22
Q ss_pred cc-------------cHHHHHHHHHHHHHHHHH-HhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchh
Q 011112 172 NI-------------EIDRIFLLFTVLPAIQLL-SCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYN 237 (493)
Q Consensus 172 ~~-------------gw~~~f~~~~~~~~l~~i-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (493)
.+ +.|+.|++.+++.++..+ .++++||++..+.+..+. +|. ++. ++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~---~~~-----------~~~----~~-- 239 (477)
T TIGR01301 180 IFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN---SEA-----------APP----SK-- 239 (477)
T ss_pred hcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh---hhc-----------ccc----cc--
Confidence 21 568899988876666554 446788876432100000 000 000 00
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeee
Q 011112 238 ISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYY 317 (493)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 317 (493)
.+.+ . .+++.++.+++. -|.++..++..|+.+.+..........|
T Consensus 240 ----~~~~-------~----------------------~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~ 284 (477)
T TIGR01301 240 ----HGEE-------A----------------------FFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDW 284 (477)
T ss_pred ----cchh-------h----------------------hHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 0000 0 122222222221 1223444444444443322111111112
Q ss_pred ee-ccCCCCH------HH---HHHH-HHHHHHHHHHHHHHHHHHHhcCChh-HHHHHHHHHHHHHhhhhhhheecccc--
Q 011112 318 QT-EILNLEA------SF---LGTA-RVVGWVGLMLGTYTYNGYLKRLKLR-RILLLTQVGLSILSFLDIVLVSRMNL-- 383 (493)
Q Consensus 318 ~~-~~~g~s~------~~---~gl~-~~~~~~~~~l~~~~~~~~~~~~~~r-~~l~~~~~~~~~~~l~~~~~~~~~~~-- 383 (493)
.. +.++-++ ++ .|.. .....+...+.+++..++.+|+|.| +...++.++.+++ +....+......
T Consensus 285 vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~-l~~~~~i~~~~~~~ 363 (477)
T TIGR01301 285 MGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAIC-LAATVLVTYVAKNS 363 (477)
T ss_pred HHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH-HHHHHHHHhhhhcc
Confidence 11 1122211 11 1333 4556666667778888999999864 4545555554443 222222221000
Q ss_pred -cc-C-----ccCc---eEeeeh-hHHHHHHHHhhHhHHHHHHhhcCCC--CchHHHHHHHHHHHhhhhhhhHhHHHHhH
Q 011112 384 -TV-G-----ISDK---TMVLYG-SALVDAVNQFKFMPFLILSGQLCPP--GIEGTLFALFMSISNFGSTVGSFFGAGLA 450 (493)
Q Consensus 384 -~~-g-----~~~~---~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~p~--~~~gt~~gl~~~~~~lg~~~~~~i~g~l~ 450 (493)
.. + .+.. ...+.. ..+.........+| ++++++..|+ +..|.++|+.|++.-+.+.+.+...|.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siP-fal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~ 442 (477)
T TIGR01301 364 RYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIP-FALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWD 442 (477)
T ss_pred ccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHh-HHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0110 111111 11111111223444 3567777774 56699999999999999999998888877
Q ss_pred HhhcCCCCCccchHHHHHHHHhhhhhhhhh-hhcccCCCC
Q 011112 451 SSLSISSGSFDNLLLGISIQALCTFIPIAF-LFLIPKGAT 489 (493)
Q Consensus 451 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 489 (493)
+.+|-.. ..++.+.+++.+++-++ ..++||.+.
T Consensus 443 ~~~g~~~------~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 443 QLFGGGN------LPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHcCCCC------eeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 7776321 23566677777666555 468898764
No 96
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.83 E-value=2e-18 Score=173.90 Aligned_cols=363 Identities=15% Similarity=0.129 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHH
Q 011112 12 FLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVL 89 (493)
Q Consensus 12 ~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l 89 (493)
..+.....||+.-+. +......+.+++++.|+|.+++|.+.++..+...+ +|+.|.++||. +.||+....++..+
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl---g~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL---GLKKHLLWFIAILL 84 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC---TTCSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh---hhhHHHHHHHHHHH
Confidence 344344555554443 45566667888888999999999999988776665 99999999997 33333333333332
Q ss_pred HHHHHHHH-hhcccchhhHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011112 90 SLVPWLIL-GLNAFFRSSTW-HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~-~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g 167 (493)
...+-+.. .+.|-...+.+ ..++.-...++......+..|+++-+..+. .+.-.|-...++++|.+++..++|
T Consensus 85 ~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~-----~~feYG~~R~wGSig~ai~s~~~G 159 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRR-----NGFEYGRARMWGSIGFAIASLLAG 159 (412)
T ss_dssp HTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHH-----HSS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH-----hcCCcchHHHHhhHHHHHHHHHhh
Confidence 22222222 22221011111 111111122444445556778887776643 344456666778999999999999
Q ss_pred HhhccccHHHHHHHHHHHHHHHHHHhhcc-ccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhh
Q 011112 168 YALTNIEIDRIFLLFTVLPAIQLLSCGLV-KENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKN 246 (493)
Q Consensus 168 ~l~~~~gw~~~f~~~~~~~~l~~i~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (493)
.+.+. +-+..||+.....++..++.++. |+++++.... + ... + +
T Consensus 160 ~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~-------~-------------~~~---~----------~- 204 (412)
T PF01306_consen 160 ILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA-------D-------------ALG---A----------K- 204 (412)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS-------T-------------TSS---S------------
T ss_pred eeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh-------c-------------ccc---c----------C-
Confidence 99874 55778887665555554443333 3333222100 0 000 0 0
Q ss_pred hhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeec---cCC
Q 011112 247 KKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTE---ILN 323 (493)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~g 323 (493)
+.+...++..+++|+|++|...++.......+.....-.+.|... ..+
T Consensus 205 -----------------------------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~ 255 (412)
T PF01306_consen 205 -----------------------------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAG 255 (412)
T ss_dssp ----------------------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHH
T ss_pred -----------------------------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 011124567788999999887665433222111111111222222 123
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHH
Q 011112 324 LEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 324 ~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
.+.+.+|.+...+.+.+.+...+..++.+|+|.|+.++++..++.+=.. ...+. ++.+.+...-.++..-
T Consensus 256 ~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~-~~~~~---------~~~~~i~~~klLH~~e 325 (412)
T PF01306_consen 256 QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRII-GSGFA---------TNPWVISLIKLLHALE 325 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHT-----------SHHHHHHHHHHHHHH
T ss_pred cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHH-HHhhh---------cchHHHHHHHHHHHHH
Confidence 3445678888888899999999999999999999999999888765321 11111 2233333334556555
Q ss_pred HHhhHhHHHHHHhhcCCCCchHHHHHHH-HHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 404 NQFKFMPFLILSGQLCPPGIEGTLFALF-MSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 404 ~~~~~~~~~~~~~~~~p~~~~gt~~gl~-~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
..+...+.+-++.+..|++..+|.+.+. +...++|..+.+.++|.+.|++|++
T Consensus 326 ~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~ 379 (412)
T PF01306_consen 326 FPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQ 379 (412)
T ss_dssp HHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcH
Confidence 5667777888999999999999999885 5667789999999999999998864
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.82 E-value=1.2e-17 Score=176.36 Aligned_cols=170 Identities=11% Similarity=0.127 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhh-HhhhhhhhhcccccccCCCCchhHHHHHHH
Q 011112 11 SFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFP-WSIKPLYGILSDCIPIKGRKRIPYLVISTV 88 (493)
Q Consensus 11 ~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~-~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~ 88 (493)
+.++.+....+...+. +.....++.|+++++|+|.++.++..+.+... +...+++|+++||+ .+||+.++.+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~----~G~r~~~~~g~~ 96 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKV----LGTKRVIMLGAI 96 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cchHHHHHHHHH
Confidence 3456566666776665 35566778888899999999988877665533 33457899999993 267888888888
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 011112 89 LSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGY 168 (493)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~ 168 (493)
+..++..++++.++ ..+.+.+.+.+++++.+...+...+++.|..+++ +++|+++.++++.+.++|..+||.++|+
T Consensus 97 ~~~ig~~l~~~~~~---~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~-~~~~~~~~~~~~~~~~iG~~~gp~i~g~ 172 (500)
T PRK09584 97 VLAIGYALVAWSGH---DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKD-DPRLDGAFTMYYMSINIGSFFSMLATPW 172 (500)
T ss_pred HHHHHHHHHHHhcc---cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCC-chhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 88888777776532 2345567788899998888788889999998642 3456678899999999999999999999
Q ss_pred hhccccHHHHHHHHHHHHHH
Q 011112 169 ALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 169 l~~~~gw~~~f~~~~~~~~l 188 (493)
+.+++|||+.|++.++...+
T Consensus 173 l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 173 LAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHhhCHHHHHHHHHHHHHH
Confidence 99999999999987754333
No 98
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.81 E-value=4.3e-19 Score=191.88 Aligned_cols=307 Identities=11% Similarity=0.063 Sum_probs=208.5
Q ss_pred hhHHHHHHH-HHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 10 VSFLWLICL-IYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 10 ~~~~~~~~~-~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
++.+.+... .++.+++.. .....++ .++++|+++.++.|++.+.+.+++.+ .++.|+++|| .+||+++..+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~-~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-----~~r~~~i~~g 104 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLT-TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-----LHRPIVIGIG 104 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhch-hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-----cCcceEEEec
Confidence 444433333 445566543 6656554 45788999999999999999999887 7899999999 4788899999
Q ss_pred HHHHHHHHHHHhhcccc-----------------------------------------------hhhHHHHHHHHHHHHh
Q 011112 87 TVLSLVPWLILGLNAFF-----------------------------------------------RSSTWHLIVLLTAQNL 119 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~-----------------------------------------------~~~~~~l~~~~~l~~~ 119 (493)
.++..++.+++++.+.. ...+..+++.|+++|+
T Consensus 105 ~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~Gi 184 (633)
T TIGR00805 105 CAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGI 184 (633)
T ss_pred HHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhc
Confidence 99999998888765300 0024457789999999
Q ss_pred hhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc----------------------cHHH
Q 011112 120 GSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI----------------------EIDR 177 (493)
Q Consensus 120 ~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~----------------------gw~~ 177 (493)
|.+...+...+++.|.. |+++|++..|++.....+|..+|+++++++.+.+ +|+.
T Consensus 185 G~~~~~~~~~~~i~d~~---~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl 261 (633)
T TIGR00805 185 GATPIFPLGISYIDDFA---KSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI 261 (633)
T ss_pred cCCcchhcCchhhhccC---CccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH
Confidence 99999999999999988 4589999999999999999999999999887532 2777
Q ss_pred HHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhh
Q 011112 178 IFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKI 257 (493)
Q Consensus 178 ~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (493)
.|++.+++.++..+..+++|++.+....+.+ .+.++.+..++. ++ +. ....
T Consensus 262 ~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~-~~~~~~~~~~~~-----~~-----~~------~~~~------------ 312 (633)
T TIGR00805 262 GFLICGGVALLTSIPFFFFPKALPKEGKRVN-VDVHETEKLEKS-----ED-----KS------RKKN------------ 312 (633)
T ss_pred HHHHHHHHHHHHHHHHHhCccccCCcccccc-hhhhhhhccccc-----cc-----cc------chhh------------
Confidence 8988887777666555556654332210000 000000000000 00 00 0000
Q ss_pred hhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHH
Q 011112 258 RKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGW 337 (493)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~ 337 (493)
....++..+.++++++||.++...+..++...........++.|+++.+|+++.+++++.....
T Consensus 313 ----------------~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~ 376 (633)
T TIGR00805 313 ----------------SDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVN 376 (633)
T ss_pred ----------------hhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhh
Confidence 0012333456678899998877665555444444444445577777789999999998865544
Q ss_pred H-HHHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHH
Q 011112 338 V-GLMLGTYTYNGYLKRLK--LRRILLLTQVGLSIL 370 (493)
Q Consensus 338 ~-~~~l~~~~~~~~~~~~~--~r~~l~~~~~~~~~~ 370 (493)
+ +.+++.+++|++.||++ .|+.+..+.++..++
T Consensus 377 i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 377 LPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred hhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 4 67889999999999887 566666666555554
No 99
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.7e-18 Score=179.76 Aligned_cols=294 Identities=16% Similarity=0.116 Sum_probs=204.8
Q ss_pred HHHHHHHHHhHH-H-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHH
Q 011112 15 LICLIYFTQGFR-S-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSL 91 (493)
Q Consensus 15 ~~~~~~f~~g~~-~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~ 91 (493)
.++..|+.+..+ . +.+..+.. +++|.+....+.|...+++..+|++ +++.|.+.||+| -.+.+....+...
T Consensus 49 ~~~~~y~~~~~d~~si~~a~l~g-~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~-----ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 49 FLCYLYFHAYLDKSSIVNASLSG-LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP-----LSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHhcchhcchhHHHcC-CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC-----hHHHHHHHHHHHH
Confidence 344445666654 2 55555444 3678999999999999999999998 799999999974 2334444333333
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh-
Q 011112 92 VPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL- 170 (493)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~- 170 (493)
+..++.... ++++.+++.|++.|+..+...|+..+++....+ ++|||..+|++.+...+|.++|.++...+.
T Consensus 123 ~~~~~~~~~----~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~---~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 123 LFGFLTAAV----HSFPGLIALRFLLGLFESGGWPGVVAILGNWYG---KSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred HHHHHHHHH----hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcC---hhhhhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 333222223 368889999999999999999999999988885 499999999999999999999999988864
Q ss_pred -----ccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhccc-ccCCCcccCCCCcccCCCCCccccchhhhhhhh
Q 011112 171 -----TNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFS-SSNGYHQVNGNESILDDEDGFSEEKYNISTKKR 243 (493)
Q Consensus 171 -----~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (493)
...||||.|++.+++.+...+.+ +++|+.|.+..-..+.+ .+. .++.++.+. + . ..
T Consensus 196 ~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~-~~~~~~~~~----~--~----------~~ 258 (495)
T KOG2533|consen 196 LNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELV-VERLRESPS----G--G----------IE 258 (495)
T ss_pred hcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHH-HHHHHhccC----C--C----------cc
Confidence 35689999999998888887665 46887765331111100 000 000000000 0 0 00
Q ss_pred hhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCC
Q 011112 244 KKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILN 323 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g 323 (493)
+ + ...+.+++.+++|++|...++.++......+.....+.|..+..|
T Consensus 259 ~-------------------------------~--~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~ 305 (495)
T KOG2533|consen 259 N-------------------------------K--FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGG 305 (495)
T ss_pred c-------------------------------c--cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCC
Confidence 0 1 112356788899999998877777666555555555666666577
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CChhHHHHHHHHHHHHHh
Q 011112 324 LEASFLGTARVVGWVGLMLGTYTYNGYLKR----LKLRRILLLTQVGLSILS 371 (493)
Q Consensus 324 ~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~----~~~r~~l~~~~~~~~~~~ 371 (493)
+|..+...+.++..++.+++.++.+.+.|| ...|..+.....+....+
T Consensus 306 ~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g 357 (495)
T KOG2533|consen 306 YSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIG 357 (495)
T ss_pred cChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 556666666666655544
No 100
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=99.78 E-value=7.5e-17 Score=162.01 Aligned_cols=399 Identities=17% Similarity=0.179 Sum_probs=239.2
Q ss_pred HHHHHHHHHhHH-HhHHHHHHHHHHh-hhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCC-CCchhHHHHHHHHHH
Q 011112 15 LICLIYFTQGFR-SFVWTAVSYQLKD-KLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKG-RKRIPYLVISTVLSL 91 (493)
Q Consensus 15 ~~~~~~f~~g~~-~~~~~~~~~~l~~-~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g-~~rr~~ii~~~~l~~ 91 (493)
++.+.|++||.. ++....+|.++++ .-++|.+|.|. +|+...|+++|.+|.|++|.+..++ .|||.|++..+.+..
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~-fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g 82 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAI-FSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSG 82 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHhee-eeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHH
Confidence 477899999996 6766677777765 24788999885 6788899999999999999876553 378889998888888
Q ss_pred HHHHHHhhcc----------cc-----hh-----hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHH
Q 011112 92 VPWLILGLNA----------FF-----RS-----STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLS 151 (493)
Q Consensus 92 ~~~~~~~~~~----------~~-----~~-----~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~ 151 (493)
+.++.++... +. +. ....+...+++.-+-.+.+|++.|+....+..+ ++++.+...-
T Consensus 83 ~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~---~n~~~ASTcq 159 (544)
T PF13000_consen 83 ILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSP---ENVGYASTCQ 159 (544)
T ss_pred HHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcCh---hhcchHHHHH
Confidence 7777766443 10 00 122345666677788899999999999988864 5566554444
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-----c--------c---H-HHHHHHHHHHHHHHHHHhhccccccccchhhhcccccCC
Q 011112 152 WLAMAFGGICGSLLGGYALTN-----I--------E---I-DRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNG 214 (493)
Q Consensus 152 ~~~~~~G~~lg~~i~g~l~~~-----~--------g---w-~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~ 214 (493)
..+++.|..++-.+--.+-+. + | - .....+..+..++...+.++.+|++..+.. ++....++
T Consensus 160 tvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~-~~~~~~~~ 238 (544)
T PF13000_consen 160 TVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESL-PKIEPINK 238 (544)
T ss_pred HhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccC-cccccccc
Confidence 445555555544443333220 0 1 0 122222222212222344555665533310 00000000
Q ss_pred CcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchH
Q 011112 215 YHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEIL 294 (493)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (493)
++...+......+|... ..++ -..+.++..+.+++.+|.|.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~----------~~~~---------------------------~~~~i~~~Y~~l~~ilkLp~V~ 281 (544)
T PF13000_consen 239 SDGKSKEISIEYDESDV----------ISTE---------------------------EILSIKDVYKSLWKILKLPNVQ 281 (544)
T ss_pred ccccccccceecccccc----------cchh---------------------------hhhhHHHHHHHHHHHHcCchHH
Confidence 00000000000000000 0000 0015677888899999999987
Q ss_pred HHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh------------------
Q 011112 295 RPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKL------------------ 356 (493)
Q Consensus 295 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~------------------ 356 (493)
...+..+...+.+.. +.....+...+.|++.++.+++.++-....++.+...+|+.+..++
T Consensus 282 ~li~ilL~~KigF~a-~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~ 360 (544)
T PF13000_consen 282 TLIIILLTAKIGFQA-NDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKII 360 (544)
T ss_pred HHHHHHHHHHhcccc-chhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchh
Confidence 766665555555443 2233344445689999999998877777777877777777653331
Q ss_pred ---------hHHHHHHHHHHHHHhhhhhhheeccccccCccCceE--eeehhHHHHHHHHhhHhHHHHHHhhcCCCCchH
Q 011112 357 ---------RRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTM--VLYGSALVDAVNQFKFMPFLILSGQLCPPGIEG 425 (493)
Q Consensus 357 ---------r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 425 (493)
-+....+.....+..++....+...+...+.+...+ ++....++++.....+++.+++.+++++|..-|
T Consensus 361 ~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGG 440 (544)
T PF13000_consen 361 RLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGG 440 (544)
T ss_pred hhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccch
Confidence 022222332222222222222333321112222222 244456677777888899999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 426 TLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 426 t~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
|++.+.|++.|+|+.....+.=.+.|.+..+
T Consensus 441 TYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 441 TYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 9999999999999999998888888877554
No 101
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=3.4e-17 Score=158.84 Aligned_cols=332 Identities=19% Similarity=0.197 Sum_probs=192.1
Q ss_pred CCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhh
Q 011112 42 KFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLG 120 (493)
Q Consensus 42 g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 120 (493)
+.+..-.|++-+.+.+.-.+ +|.||-++|| ++||+.++.+.+..+++.++.+.+. ++..+++.|++.|+.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-----yGRkpvll~c~~~va~s~ll~~~S~----~F~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDR-----YGRKPVLLACLIGVALSYLLWALSR----NFAAFVLARFLGGIF 134 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhh-----hCchHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhhhc
Confidence 33444567777777776665 8999999999 4899999999999999888777764 564556669999998
Q ss_pred hhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc---cccHHHHHHHHHHHHHHH-----HHH
Q 011112 121 SAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT---NIEIDRIFLLFTVLPAIQ-----LLS 192 (493)
Q Consensus 121 ~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~---~~gw~~~f~~~~~~~~l~-----~i~ 192 (493)
.+... +..++++|+.++ ++|+..++...++..+|.++||++||++.. ..| +..|........+. ...
T Consensus 135 kgnl~-v~rAiisdV~se---k~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~ 209 (451)
T KOG2615|consen 135 KGNLS-VIRAIISDVVSE---KYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFF 209 (451)
T ss_pred cCchH-HHHHHHHhhcCh---hhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence 88776 467999999964 899999999999999999999999999987 222 22222211111111 123
Q ss_pred hhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHH
Q 011112 193 CGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQ 272 (493)
Q Consensus 193 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (493)
.+++||+-+.++.+ | +.. +.++++.++. + ..
T Consensus 210 ~~~lpETL~~rk~~-~-----~~~---~~~~~~~~~~------------~-~~--------------------------- 240 (451)
T KOG2615|consen 210 PWFLPETLPLRKRN-D-----EHS---TLQEAADDRL------------A-LL--------------------------- 240 (451)
T ss_pred HHhCCccccchhhc-c-----ccc---chhhhhhhhh------------h-hc---------------------------
Confidence 45688885444211 1 000 0000000000 0 00
Q ss_pred HHhhHHHHHHHHHHhhcccc------hHHHHH-HHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHH
Q 011112 273 WFHSLKAAIYSLYSAFRQPE------ILRPMA-WFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTY 345 (493)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~~~------~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~ 345 (493)
+.++ ..-...+||+. +++.+. -.++....+.........+....+|+++.+.|.+....++.+.+...
T Consensus 241 ---~~~~--~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql 315 (451)
T KOG2615|consen 241 ---KFAR--IFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQL 315 (451)
T ss_pred ---chhh--hhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHH
Confidence 0000 00112223322 111111 11111111222211222333456899999999876655555555445
Q ss_pred HHHHHHhcCC--hhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCc
Q 011112 346 TYNGYLKRLK--LRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGI 423 (493)
Q Consensus 346 ~~~~~~~~~~--~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 423 (493)
...+..+|.. .+-.+.....++.-. ..+... .+....+-....+..++......-.+.++....|+++
T Consensus 316 ~~~~~l~~~~~~~~a~l~~~l~~~vP~----~llls~------~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q 385 (451)
T KOG2615|consen 316 ALVPILPRYKGNIKAVLLFSLLLIVPA----FLLLSL------ARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ 385 (451)
T ss_pred hccccccccccchhhHHHHHHHHHHHH----HHHHhc------cccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc
Confidence 4555555443 333333333333221 111111 1111111112233334433333334677889999999
Q ss_pred hHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 424 EGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 424 ~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
||+.+|+..+.+.+++++||.++|.+.+
T Consensus 386 rG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 386 RGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 9999999999999999999999987766
No 102
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=3.4e-16 Score=166.24 Aligned_cols=384 Identities=19% Similarity=0.176 Sum_probs=220.4
Q ss_pred hHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHH
Q 011112 47 ASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMAD 125 (493)
Q Consensus 47 ~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 125 (493)
+.+++.+...++..+ +++.|.++|++ +||+.++.+.+++.++.+++++++ +.+.+.+.|+++|+|.+...
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-----GRk~~l~~~~~~~~iG~ii~~~a~----~~~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-----GRKKTLLLAVVLFLIGAIIIALAP----SWYQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHhccchhhhh
Confidence 448888889888877 79999999995 789999999999999999999886 57889999999999999999
Q ss_pred HHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-ccHHHHHHHHHHHHHHHHHHhhccccccccch
Q 011112 126 VVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN-IEIDRIFLLFTVLPAIQLLSCGLVKENRVSTK 204 (493)
Q Consensus 126 ~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~-~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~ 204 (493)
....-+++|+. |++.||...+..+....+|..+|.+++....+. .+||..+.+..+.+++..+..+++||+|++..
T Consensus 161 ~~~piy~sEia---p~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~ 237 (513)
T KOG0254|consen 161 VLAPVYISEIA---PAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLI 237 (513)
T ss_pred hcchhhHhhcC---ChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHH
Confidence 99999999998 458999999999999999999996665554332 48999999888887777777778999998774
Q ss_pred hhhcc---c-ccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHH
Q 011112 205 VLKEF---S-SSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAA 280 (493)
Q Consensus 205 ~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (493)
++.+. . .+...+ +..+ ++. +. .. . +++.+ .........++.
T Consensus 238 ~~g~~~~a~~~l~~l~---g~~~---~~~----~~--------~~-------~--~~~~~--------~~~~~~~~~~~~ 282 (513)
T KOG0254|consen 238 EKGRLEEAKRSLKRLR---GLSP---EDV----EV--------EL-------E--LLKIK--------LLVEAEVAEGKA 282 (513)
T ss_pred HcCChHHHHHHHHHHh---CCCC---cch----HH--------HH-------H--HHHHH--------HHHhhhcccccc
Confidence 32110 0 000000 0000 000 00 00 0 00000 000000000000
Q ss_pred HHHHHHhhcccchHHHHH-HH-HHHHhcccCCCcceeeeee---ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 011112 281 IYSLYSAFRQPEILRPMA-WF-FLAHVAVPNLSTVMFYYQT---EILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLK 355 (493)
Q Consensus 281 ~~~~~~~l~~~~~~~~~~-~~-~l~~~~~~~~~~~~~~~~~---~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~ 355 (493)
...+.++ |....... .. ........+.+.. .+|.. +..|.+... ........+...++..+...+.||.|
T Consensus 283 --~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~-~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~g 357 (513)
T KOG0254|consen 283 --SWGELFS-PKVRKRLIIGLLLQLFQQLTGINYV-FYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFG 357 (513)
T ss_pred --cHHHhcC-cchHHHHHHHHHHHHHHHHhCCceE-EeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111121 32222111 11 1111222333333 23322 225555332 22233344445555555678889999
Q ss_pred hhHHHHHHHHHHHHHhhhhhhheeccccccCcc--CceEeeehhHHHHHHHHhhHhHH-HHHHhhcCCCCchHHHHHHHH
Q 011112 356 LRRILLLTQVGLSILSFLDIVLVSRMNLTVGIS--DKTMVLYGSALVDAVNQFKFMPF-LILSGQLCPPGIEGTLFALFM 432 (493)
Q Consensus 356 ~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~--~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~gt~~gl~~ 432 (493)
||+.++.+...+.++...............+.. ..++.+...++........+.|. +.+.+|..|.+.|+++.++..
T Consensus 358 Rr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~ 437 (513)
T KOG0254|consen 358 RRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAV 437 (513)
T ss_pred cHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHH
Confidence 999999999888876543222111100000000 01111111222222222333444 357899999999999999988
Q ss_pred HHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhh-h-hhcccCCCCC
Q 011112 433 SISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIA-F-LFLIPKGATG 490 (493)
Q Consensus 433 ~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~~~~~~ 490 (493)
.++.+.+.+-......+.+..+ .. ..+.....++.+... + ..++||++++
T Consensus 438 ~~n~~~~~~v~~~~~~~~~~~~-----~~---~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 438 AVNWLWNFLISFFFPFITEALG-----IG---GTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-----cc---chHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 8887766444433333333322 01 122233333333333 3 4699998764
No 103
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.77 E-value=2.5e-16 Score=154.76 Aligned_cols=358 Identities=17% Similarity=0.195 Sum_probs=243.5
Q ss_pred hhhchhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 6 NVFGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
|+.+..+.. +...+|+-|+..-.+..+.|.+++.++.|..|.+.+...++-+|.+ ..+.|.+.+|+ ++|+-++
T Consensus 9 ~~~~~~~v~-~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-----gyk~gi~ 82 (422)
T COG0738 9 KSVKLAFVL-LTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-----GYKAGIV 82 (422)
T ss_pred CCceeHHHH-HHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-----hhHHHHH
Confidence 334444444 6666788888764556677888999999999999999999999987 67899999995 6788889
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
++..++++++.+..-+.+ ..++..+++..++.+.|.+..++.++.++..+.++ ++..+-+++.+....+|.++||.
T Consensus 83 lgL~l~avg~~lF~pAa~-~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~---~~a~~rlnl~q~fn~lGa~~gp~ 158 (422)
T COG0738 83 LGLLLYAVGAALFWPAAS-SKSYGFFLVALFILASGIGLLETAANPYVTLLGKP---ESAAFRLNLAQAFNGLGAILGPL 158 (422)
T ss_pred HHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCc---hhHHHHHHHHHHhhhhHHHHHHH
Confidence 999999999887753322 23666788888999999999999999999999865 34445578888899999999999
Q ss_pred HHHHhhcc-------------------ccHHHHHHHHHHHHHHHHHHhhcc--ccccccchhhhcccccCCCcccCCCCc
Q 011112 165 LGGYALTN-------------------IEIDRIFLLFTVLPAIQLLSCGLV--KENRVSTKVLKEFSSSNGYHQVNGNES 223 (493)
Q Consensus 165 i~g~l~~~-------------------~gw~~~f~~~~~~~~l~~i~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (493)
+++++..+ ..|++++...+...+++.+..... ||.+....
T Consensus 159 ~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~------------------- 219 (422)
T COG0738 159 LGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAP------------------- 219 (422)
T ss_pred HHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccc-------------------
Confidence 99988763 137788887776555444443322 22221110
Q ss_pred ccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHH
Q 011112 224 ILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLA 303 (493)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 303 (493)
+. + +.++. ...+.+|+|.++...+..|++
T Consensus 220 ----~~---------------~------------------------------~~~~~--~~~~l~~~~~~~~gvl~~FlY 248 (422)
T COG0738 220 ----SL---------------G------------------------------ASGSA--GLSSLFQNKHLRLGVLAIFLY 248 (422)
T ss_pred ----cc---------------c------------------------------ccccc--hHHHHHhChHHHHHHHHHHHH
Confidence 00 0 00000 133556788887777777773
Q ss_pred HhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccc
Q 011112 304 HVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNL 383 (493)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~ 383 (493)
..........++.|+.+..|+++++.+......+++.++|..++.++.+|+..+|.+....++..+..+. ..+.
T Consensus 249 VG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~-~~l~----- 322 (422)
T COG0738 249 VGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA-VALI----- 322 (422)
T ss_pred HhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH-HHHh-----
Confidence 3333333333455665668999999999999999999999999999999999999998887665543221 1111
Q ss_pred ccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCC
Q 011112 384 TVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSIS 456 (493)
Q Consensus 384 ~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~ 456 (493)
++.. .+......+...+..+...++...+..|++-+.. |....+.-.|+++-|.+-|++.|..|..
T Consensus 323 ----~g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~--s~~l~maivGGAiiP~l~G~i~d~~g~~ 388 (422)
T COG0738 323 ----GGVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVG--SGLLVMAIVGGAIIPPLQGVIADMFGIQ 388 (422)
T ss_pred ----cChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCcccccc--ceeeeeheecchHHHHHHHHHHHhhhhH
Confidence 1111 0111122223333333334677777777443333 3334456679999999999999988753
No 104
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=1.9e-16 Score=156.54 Aligned_cols=371 Identities=16% Similarity=0.154 Sum_probs=235.3
Q ss_pred HHHHHHHHHHhhhCC---CHhh----HHHHHHHHHhh-HhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhc
Q 011112 29 VWTAVSYQLKDKLKF---SPSA----SQFVSAVAFFP-WSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLN 100 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~---s~~~----~g~~~s~~~l~-~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~ 100 (493)
.....|+|+++..+. ++.+ .|...++..+. ..+.|+.|.++|.. ..||+++-....+..++...+.+.
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~----g~Rk~~~~~f~~i~i~~~~~L~~i 109 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP----GPRKKFFGFFTAIGIISTFLLWFI 109 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC----CCcchHHHHHHHHHHHHHHHHHHh
Confidence 344556777776554 4433 23334444333 34589999999984 467777777777777787777777
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH--HHh-h-------
Q 011112 101 AFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG--GYA-L------- 170 (493)
Q Consensus 101 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~--g~l-~------- 170 (493)
++. +..+..++...+...+.....+.+|++..++.++ ++-++..++-+...++|+.+--+.. +.+ .
T Consensus 110 ~~~-s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k---~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~ 185 (438)
T COG2270 110 PPG-SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTK---DNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITI 185 (438)
T ss_pred CCC-chHHHHHHHHHHHHHhcchhheehhhHhhhhcCc---cccCcccccccccccccchHHHHHHHHHHhcccccceeE
Confidence 653 3455566677788899999999999999999854 6667777777777788877654442 111 1
Q ss_pred --------ccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhh
Q 011112 171 --------TNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTK 241 (493)
Q Consensus 171 --------~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (493)
+...-|..+.+.++.-++..+.. +.+|+.++... + . ++
T Consensus 186 ~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~-~---------------------~-----~~------ 232 (438)
T COG2270 186 ILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISS-P---------------------P-----PT------ 232 (438)
T ss_pred EeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccc-c---------------------c-----hH------
Confidence 23346778888887776666543 44554332110 0 0 00
Q ss_pred hhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeecc
Q 011112 242 KRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEI 321 (493)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (493)
..++++|+...++++..+++.+...++--++..-...+.......|...+
T Consensus 233 ------------------------------~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~ 282 (438)
T COG2270 233 ------------------------------ALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD 282 (438)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 01113444444455555566665554333332211122222223455667
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHH
Q 011112 322 LNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVD 401 (493)
Q Consensus 322 ~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 401 (493)
+|++..+..+..+...+.+++|+++++++.+|++.|+++..+.++..+..+..+ ... ...-+++....+..
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~-~~~--------~~~~f~i~gll~g~ 353 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI-FLE--------GELDFWILGLLVGT 353 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH-Hcc--------ccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999888776543221 111 11112222111111
Q ss_pred HHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh
Q 011112 402 AVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (493)
..+. .....-++..++.|++++++.+|+++..++.+..+||+..+.+.+..|.. ...+....+.-+++++.+
T Consensus 354 s~G~-~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~-------r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 354 SLGG-AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS-------RAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred hcch-HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch-------hhHHHHHHHHHHhhHhhE
Confidence 1111 11112357899999999999999999999999999999999999987642 233444455556677766
Q ss_pred hcccCC
Q 011112 482 FLIPKG 487 (493)
Q Consensus 482 ~~l~~~ 487 (493)
..+|..
T Consensus 426 ~~v~~~ 431 (438)
T COG2270 426 LRVKVP 431 (438)
T ss_pred EeecCC
Confidence 666633
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.74 E-value=9.8e-16 Score=159.55 Aligned_cols=168 Identities=16% Similarity=0.139 Sum_probs=124.3
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+++.++.++...+...+.. .....++.|+++++|.++.+.+...+.+.....+ .++.|+++||+ .+||+.++.+
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRi----lGrrr~iliG 82 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKV----LGNRMAVMLG 82 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCcHHHHHHH
Confidence 5566665555556666653 5566677788888999999999988887766555 66899999995 3678888888
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
.++..++.++++..++ ....+.+...+..+|.+...+...+++.|..++ ++++|.+..++.+...++|..++|.+.
T Consensus 83 ~il~~lg~lll~~~~~---~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~-~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 83 ALLMAIGHVVLGASEI---HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEP-TDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred HHHHHHHHHHHHHhhc---chhHHHHHHHHHHHhcccccccHHHHHHHHCCC-CCccccceehHHHHHHHHHHHHHHHHH
Confidence 8888888766654321 111223333344455555555667889999864 235788899999999999999999999
Q ss_pred HHhhccccHHHHHHHHHH
Q 011112 167 GYALTNIEIDRIFLLFTV 184 (493)
Q Consensus 167 g~l~~~~gw~~~f~~~~~ 184 (493)
+++.++.|||+.|.+.++
T Consensus 159 g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 159 GYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred HHHHhhhChHHHHHHHHH
Confidence 999999999999998664
No 106
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.74 E-value=1.7e-17 Score=164.44 Aligned_cols=421 Identities=14% Similarity=0.106 Sum_probs=242.9
Q ss_pred hchhHHHHH---HHHHHHHhHHH-hHHHHHHHHHHh-hhCCC-------HhhHHHHHHHHHhhHhh-hhhhhhccccccc
Q 011112 8 FGVSFLWLI---CLIYFTQGFRS-FVWTAVSYQLKD-KLKFS-------PSASQFVSAVAFFPWSI-KPLYGILSDCIPI 74 (493)
Q Consensus 8 ~~~~~~~~~---~~~~f~~g~~~-~~~~~~~~~l~~-~~g~s-------~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~ 74 (493)
.+|+..-++ ...+|+++++. .++.. .+++.. ++|.+ ..-.+.+-....++-++ |.++|++.|++
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lV-t~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-- 111 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLV-TKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-- 111 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHH-HHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Confidence 466666544 33346688875 34333 333333 34433 33445555566777777 89999999995
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhhcccc--h-hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHH
Q 011112 75 KGRKRIPYLVISTVLSLVPWLILGLNAFF--R-SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLS 151 (493)
Q Consensus 75 ~g~~rr~~ii~~~~l~~~~~~~~~~~~~~--~-~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~ 151 (493)
+||+.....+++.+++..++++.... . ....++...|++.|+|.+.-+|.+.+..+|... .++||...+..
T Consensus 112 ---GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an---~~~RGa~iaav 185 (538)
T KOG0252|consen 112 ---GRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESAN---KKTRGAFIAAV 185 (538)
T ss_pred ---cchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhh---hccccceeEEE
Confidence 67888888888888888777665432 1 356778899999999999999999999999984 59999988888
Q ss_pred HHHHHHHHHHHHHHHHHhhc----c-----------ccHHHHHHHHHHHHHHHHHHhhccccccccch--hhh-c--ccc
Q 011112 152 WLAMAFGGICGSLLGGYALT----N-----------IEIDRIFLLFTVLPAIQLLSCGLVKENRVSTK--VLK-E--FSS 211 (493)
Q Consensus 152 ~~~~~~G~~lg~~i~g~l~~----~-----------~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~--~~~-~--~~~ 211 (493)
...+..|.+.|.+++-.+.. . .-||..|.+.++++++.....+.+||+++... +++ + +..
T Consensus 186 Fa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d 265 (538)
T KOG0252|consen 186 FAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGD 265 (538)
T ss_pred EEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhc
Confidence 77777777766666554432 1 13999999888777666666778999987651 100 0 000
Q ss_pred cCCCc--ccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhc
Q 011112 212 SNGYH--QVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFR 289 (493)
Q Consensus 212 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (493)
.+++. .+++.+.+ ++..++. + . .+..+...+.. | .
T Consensus 266 ~~k~~~~~~~~~~~~--~~~~~~~-----------~-------~-------------------~~~~F~~~f~~-~---h 302 (538)
T KOG0252|consen 266 MKKVLSVDIEAESTA--ESDVPPP-----------S-------N-------------------SFGLFSRLFLR-W---H 302 (538)
T ss_pred cccccccccchhhcc--ccCCCCc-----------c-------c-------------------ccchHHHHHHH-H---H
Confidence 11000 00000000 0000000 0 0 00001100000 0 0
Q ss_pred ccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHH--------HH-HHHHHHHHHHHHHHHHHHHhcCChhHHH
Q 011112 290 QPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLG--------TA-RVVGWVGLMLGTYTYNGYLKRLKLRRIL 360 (493)
Q Consensus 290 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~g--------l~-~~~~~~~~~l~~~~~~~~~~~~~~r~~l 360 (493)
-+.+.....-.|+.-+++...+-...... +..|+.+.... .. .+....+.+.|-.+...+.|++|++++.
T Consensus 303 g~~Llgt~~~WFllDiafy~~nL~~s~I~-~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq 381 (538)
T KOG0252|consen 303 GKHLLGTAGTWFLLDIAFYGQNLFQSVIF-SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHHhhhhhhhccccHHHHHH-HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH
Confidence 01122222222222222221111110011 11343322211 11 1222333333445556778999999999
Q ss_pred HHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhH-HHHHHhhcCCCCchHHHHHHHHHHHhhhh
Q 011112 361 LLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMP-FLILSGQLCPPGIEGTLFALFMSISNFGS 439 (493)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~gt~~gl~~~~~~lg~ 439 (493)
+.+.+++.+..++ +...++... ....+ +++..+.++.+.+.-.. .....+|..|.+.|++..|+....+.+|.
T Consensus 382 ~~GF~~~~i~~~~---~~~~y~~~~--~~~Gf-~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GA 455 (538)
T KOG0252|consen 382 LMGFFIMTIFFFV---IAGPYNQLE--NTIGF-VVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGA 455 (538)
T ss_pred HhhHHHHHHHHHH---HcCCccccc--ccCce-eehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchH
Confidence 9999998876433 222222111 11222 22334444444332111 13457899999999999999999999999
Q ss_pred hhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCCCCC
Q 011112 440 TVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKGATG 490 (493)
Q Consensus 440 ~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 490 (493)
.++...-..+.++- -...-++...+.+...|+++++++.+++||++++
T Consensus 456 ivg~~~F~~~t~~~---yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~ 503 (538)
T KOG0252|consen 456 IVGAFGFLYLTDHN---YPPNIGVRNVFIILAGCMLLGILFTLLIPETKGK 503 (538)
T ss_pred HHHHHHhhHhhhcc---CCccccchHHHHHHHHHHHHhHheeEEeeccccc
Confidence 99988777777631 1122345667888999999999999999987764
No 107
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.74 E-value=6.5e-16 Score=164.53 Aligned_cols=379 Identities=15% Similarity=0.112 Sum_probs=231.1
Q ss_pred hhhCCCHhhHHHHHHHHHhhHhhhh-hhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 011112 39 DKLKFSPSASQFVSAVAFFPWSIKP-LYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQ 117 (493)
Q Consensus 39 ~~~g~s~~~~g~~~s~~~l~~~~~~-~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 117 (493)
+.+..+........++++++..+++ ++|+++||+ +||+.++.+.++.+++....++++ +++.+.++|++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-----GRk~~~~~~~~~~~i~~~~~a~a~----~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-----GRKPVLLVSLLLFIIFGILTAFAP----NYWMFLIFRFLS 181 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-----ccHHHHHHHHHHHHHHHHHHHHhC----cHHHHHHHHHHH
Confidence 4567778888888999999999965 799999994 789999999999999988888886 688999999999
Q ss_pred HhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhhccc
Q 011112 118 NLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVK 197 (493)
Q Consensus 118 ~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~ 197 (493)
|++.+........++.|... +++|+.+..+ ......++.+++.+++++.+ +||+.+++..++.++.++.+++.|
T Consensus 182 G~~~~~~~~~~~~~~~E~~~---~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~ 255 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVS---PKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPP 255 (521)
T ss_pred HhhccchhHHhHhhheeecC---cchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999984 5999999999 88888888899999999987 899999998888777766666677
Q ss_pred cccccchhhhc---ccccCCCc-ccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHH
Q 011112 198 ENRVSTKVLKE---FSSSNGYH-QVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQW 273 (493)
Q Consensus 198 e~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (493)
|++++...+.+ +....++. +.|+.. . .+ ++. .+.. ..
T Consensus 256 Es~rwl~~~g~~~~a~~~l~~~a~~n~~~-----~--~~-~~~-----~~~~--------------------------~~ 296 (521)
T KOG0255|consen 256 ESPRWLLSKGRIDEAIKILKKIAKLNGRK-----L--SV-KEL-----LRLE--------------------------LL 296 (521)
T ss_pred cChHHHHHcCchHHHHHHHHHHHhhcCCC-----C--Cc-HHH-----HHHH--------------------------HH
Confidence 99887742211 11100000 000000 0 00 000 0000 00
Q ss_pred HhhHHH----HHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 011112 274 FHSLKA----AIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNG 349 (493)
Q Consensus 274 ~~~~~~----~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~ 349 (493)
.+..+. ....+.+.++.|+.....++..+.+........... +....+|-+ ..+.....+.....+....+.
T Consensus 297 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~-~~~~~lg~~---~~~~~~~~~~~~~p~~~~~~~ 372 (521)
T KOG0255|consen 297 LRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLS-LNVSGLGGN---IYLNFTLSGLVELPAYFRNGL 372 (521)
T ss_pred hhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhh-hhhhhcCch---HHHHHHHHHHHHhhHHHHHHH
Confidence 000000 001234555666544433333322211111100000 101112222 222222233355555555677
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHH
Q 011112 350 YLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFA 429 (493)
Q Consensus 350 ~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~g 429 (493)
..++.|||.....+..+..++.+...+.... ...........+..+..+..+...+.+.+|+.|...|.++.+
T Consensus 373 ~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~ 445 (521)
T KOG0255|consen 373 LLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD-------LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVG 445 (521)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc-------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 8888888888888877776654332222110 110111112233333334444555778999999999999999
Q ss_pred HHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCCCCC
Q 011112 430 LFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKGATG 490 (493)
Q Consensus 430 l~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 490 (493)
..+....++..++|.+.-.... +. ..+...+ ...+..+.+++...++||..+.
T Consensus 446 ~~~~~~~~~~i~ap~~~~~~~~-~~------~~~~~~~-~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 446 AISAAARLGSILAPLFPLLLRQ-MF------PLLGLIL-FGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-hc------ccchHHH-HHHHHHHHHHHHHhcCcccCCC
Confidence 9999999999999887554443 21 1112122 2333344444444788887664
No 108
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.73 E-value=4.6e-16 Score=150.33 Aligned_cols=366 Identities=16% Similarity=0.149 Sum_probs=220.2
Q ss_pred HHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccC-CCCchhHHHHHHHH
Q 011112 12 FLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIK-GRKRIPYLVISTVL 89 (493)
Q Consensus 12 ~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~-g~~rr~~ii~~~~l 89 (493)
...++.+.|.+||.. ++.. .+|.+++. =|+|.++.+. .+...+||+++.+|.|++|.+..+ ..|||.|++-++.+
T Consensus 32 ~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~-fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~l 108 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAI-FSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYL 108 (510)
T ss_pred hHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhh-hhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHH
Confidence 334477999999996 5776 77777774 5899998885 667788999999999999944332 13788888888877
Q ss_pred HHHHHHHHhhcccc-------hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 90 SLVPWLILGLNAFF-------RSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 90 ~~~~~~~~~~~~~~-------~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
....++.++...+. ..+...+...+++..|.++.+|++.|+....+..+ ++.|-+ .+++++|.-.|
T Consensus 109 lG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~---e~lgya----ST~q~Vg~~~G 181 (510)
T KOG3574|consen 109 LGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSR---ENLGYA----STCQSVGQTAG 181 (510)
T ss_pred HHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCH---hhcCch----hHHHHHHHhhh
Confidence 66666666654321 12233344566788999999999999999998854 555544 44555555555
Q ss_pred HHHHHHhh----c-------cccHH----------HHHHHHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCC
Q 011112 163 SLLGGYAL----T-------NIEID----------RIFLLFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGN 221 (493)
Q Consensus 163 ~~i~g~l~----~-------~~gw~----------~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 221 (493)
..++..+. + ..+|. ..+++.....+...+.+++-+|++.... |
T Consensus 182 yfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~---------~------- 245 (510)
T KOG3574|consen 182 YFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVD---------E------- 245 (510)
T ss_pred HHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh---------h-------
Confidence 55555332 2 01221 3333333221222223333333322210 0
Q ss_pred CcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHH
Q 011112 222 ESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFF 301 (493)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 301 (493)
|+ + . +.++..+-++++++-|.+.....+..
T Consensus 246 ------------e~--------~--------~----------------------~i~~~yk~l~~vLklk~v~~la~i~l 275 (510)
T KOG3574|consen 246 ------------EL--------E--------L----------------------GIHESYKLLRDVLKLKSVRWLAGILL 275 (510)
T ss_pred ------------hh--------h--------c----------------------CHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 00 0 0 23444556777788887765555444
Q ss_pred HHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChh-----HHHHHHH-HHHHHHhhhh
Q 011112 302 LAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKR-LKLR-----RILLLTQ-VGLSILSFLD 374 (493)
Q Consensus 302 l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~-~~~r-----~~l~~~~-~~~~~~~l~~ 374 (493)
...+.+... ..+......+.|++.++.+++.++.....++.+...|++..+ .+.. ..+-+.. .+..+ +
T Consensus 276 t~K~gf~a~-da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~--L-- 350 (510)
T KOG3574|consen 276 TGKLGFQAA-DALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTA--L-- 350 (510)
T ss_pred HHHHHhhhh-hhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHH--H--
Confidence 444444433 333445555689999999988766666666766666666552 2211 0111111 11111 1
Q ss_pred hhheecccc-ccCccCce--EeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 375 IVLVSRMNL-TVGISDKT--MVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 375 ~~~~~~~~~-~~g~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
.+....+.. ....+... +++....+.+......++..|++.++++||...||+|++.|+..|+|+..-..+...+.|
T Consensus 351 v~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 351 VWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 111111111 00011111 122223445555555667778899999999999999999999999999999999999999
Q ss_pred hhcCCCC
Q 011112 452 SLSISSG 458 (493)
Q Consensus 452 ~~g~~~~ 458 (493)
.+++.+|
T Consensus 431 ~ltv~~C 437 (510)
T KOG3574|consen 431 GLTVKQC 437 (510)
T ss_pred cCceeec
Confidence 8887654
No 109
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.72 E-value=3.3e-15 Score=144.16 Aligned_cols=400 Identities=14% Similarity=0.081 Sum_probs=221.4
Q ss_pred hchhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+||.-..........+.+-.+....+.|-+.+.+|.+..|...+....+.++.+ +-.||..+|++ +||+-...+
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-----grr~~f~~T 149 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-----GRRKGFNLT 149 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-----hcchhhhhh
Confidence 566555544444444444334444556777888998888888888888899988 57899999996 344455555
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
....++.-.+-+..+ ++..+.+.|.+.++|.+. .+...++-.|.. |..+|+...-.. ..+.+|.+....+.
T Consensus 150 ~l~t~v~~~is~~sp----nf~~L~~f~~l~~~g~gg-~pv~~~~yle~l---p~~~r~~~~V~~-~~waig~v~ea~la 220 (528)
T KOG0253|consen 150 FLVTGVFGVISGASP----NFASLCVFRALWGFGVGG-LPVDSAIYLEFL---PSSHRWLLTVMS-FFWAIGQVFEALLA 220 (528)
T ss_pred HHHHHHHHHhhcCCC----CeehhhHHHHHHhccCCC-ccHhHHHHHHhc---cCcCCCcchhHH-HHHHHHHHHHHHHH
Confidence 555555555555555 566788999999998888 445556667776 446777655555 88999999999999
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHHHhhccccccccchhhhc---ccc-cCCCcccCCCCcccCCCC----Cccccchhh
Q 011112 167 GYALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRVSTKVLKE---FSS-SNGYHQVNGNESILDDED----GFSEEKYNI 238 (493)
Q Consensus 167 g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 238 (493)
-.+..++||||......++..+.+..++++||++|..-.+.+ +.. +++-.++|+.+.|.-... ..++|+++
T Consensus 221 w~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~- 299 (528)
T KOG0253|consen 221 WGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEES- 299 (528)
T ss_pred HHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhh-
Confidence 888899999998877775554555677889999876532211 111 122224444333222110 01111110
Q ss_pred hhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHh-hcccchHHHH-HHHH-HHHh--cccCCCcc
Q 011112 239 STKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSA-FRQPEILRPM-AWFF-LAHV--AVPNLSTV 313 (493)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~-~~~~-l~~~--~~~~~~~~ 313 (493)
+..|++.+.+-+--...-+-+..++++.=-.+|.. +.|+...... ++.- +.+. ..+..+.-
T Consensus 300 --------------~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~ 365 (528)
T KOG0253|consen 300 --------------DLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRF 365 (528)
T ss_pred --------------chhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhc
Confidence 00111100000000011111111222111112221 2222211111 1100 0011 11111111
Q ss_pred eeeeeecc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCce
Q 011112 314 MFYYQTEI--LNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKT 391 (493)
Q Consensus 314 ~~~~~~~~--~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~ 391 (493)
.+++++.. .-.+...--.-.....+...-|.++.+.+.||+|+|+++-...++..+..++...... ++..
T Consensus 366 ~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~--------rn~~ 437 (528)
T KOG0253|consen 366 LPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT--------RNAY 437 (528)
T ss_pred chhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC--------cchh
Confidence 12222110 1122211111234566677788888899999999999998888777765433222221 2211
Q ss_pred EeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHH
Q 011112 392 MVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFG 446 (493)
Q Consensus 392 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~ 446 (493)
..+ .+...++-...+-..++|..|.+|...|+++.|++++++.+|+.+.|.++
T Consensus 438 tvl--lf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 438 TVL--LFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred HHH--HHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 111 11122222222223356789999999999999999999999999999988
No 110
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.70 E-value=1.2e-20 Score=197.02 Aligned_cols=386 Identities=19% Similarity=0.169 Sum_probs=218.8
Q ss_pred hHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHH
Q 011112 47 ASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMAD 125 (493)
Q Consensus 47 ~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 125 (493)
+.++..+...++..+ .++.|.++||+ +||+.++.+.++..++.++.+++++. .+++.+.+.|++.|++.+...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-----GRk~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-----GRKPALIISALLMIIGSILIAFAPSY-NNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-----cccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 456777888888887 68899999995 67788888988888888888877632 246778899999999999999
Q ss_pred HHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc---ccHHHHHHHHHHHHHHHHHHhhcccccccc
Q 011112 126 VVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN---IEIDRIFLLFTVLPAIQLLSCGLVKENRVS 202 (493)
Q Consensus 126 ~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~---~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~ 202 (493)
+....++.|.. |+++||+..++...+..+|..++..++-.+.+. .+||..+.+.+++.++..+..+++||+|++
T Consensus 121 ~~~~~~~~E~~---~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~w 197 (451)
T PF00083_consen 121 VVSPIYISEIA---PPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRW 197 (451)
T ss_pred ccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce
Confidence 99999999998 458999999999999999999888877655433 349999988887766666666789999987
Q ss_pred chhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHH
Q 011112 203 TKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIY 282 (493)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (493)
...+.+..+ .++.+++.+..+.++....++. ...++ . ++.+ .
T Consensus 198 L~~~~~~~~--A~~~l~~~~~~~~~~~~~~~~~------~~~~~------~---------------------~~~~---~ 239 (451)
T PF00083_consen 198 LLSKGRDEE--AEKVLRKLRGKEIEDEEIEEIK------AEKKE------S---------------------QESK---A 239 (451)
T ss_pred ecccccccc--cccccccccccccccccccccc------ccccc------c---------------------cccc---e
Confidence 743221100 0001111000000000000000 00000 0 0000 1
Q ss_pred HHHHhhcccc----hHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhH
Q 011112 283 SLYSAFRQPE----ILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRR 358 (493)
Q Consensus 283 ~~~~~l~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~ 358 (493)
...+.++++. ....+......................+..|.+.. -.......+...++.++...+.||+|+|+
T Consensus 240 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~ 317 (451)
T PF00083_consen 240 SWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRK 317 (451)
T ss_pred eeeeccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence 1222333322 11111111110111100111111112233555554 11122233344455555567889999999
Q ss_pred HHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHH-HHHHhhcCCCCchHHHHHHHHHHHhh
Q 011112 359 ILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPF-LILSGQLCPPGIEGTLFALFMSISNF 437 (493)
Q Consensus 359 ~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~gt~~gl~~~~~~l 437 (493)
+++.+.....+..+.............-......+. ...+..+.......+. ..+..|..|.+.|+++.++...++++
T Consensus 318 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i 396 (451)
T PF00083_consen 318 LLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIV-FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI 396 (451)
T ss_pred ccccccccccccccccccccccccccccccccccce-eeeeccccccccccccccccccccccccccccccccccccccc
Confidence 998888777665432210011000000000111111 1111111222223333 36789999999999999999999999
Q ss_pred hhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhh-hhcccCCCCC
Q 011112 438 GSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAF-LFLIPKGATG 490 (493)
Q Consensus 438 g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~ 490 (493)
++.+++.+...+.+..+. ...+.+.+.++++..++ ..++||++++
T Consensus 397 ~~~i~~~~~~~~~~~~~~--------~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 397 GGFIIPFLFPYLFNNLGG--------WGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred cccccccccccccccccc--------cccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 998888887777765541 11223333334444433 4689999875
No 111
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.69 E-value=2.2e-15 Score=158.07 Aligned_cols=367 Identities=14% Similarity=0.121 Sum_probs=228.6
Q ss_pred HHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHH
Q 011112 34 SYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIV 112 (493)
Q Consensus 34 ~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 112 (493)
.+.++++++.+..+++|..++....+.+ +|+.+.+.||+ +.|...+.|.++..+++++.++++ +.|.+++
T Consensus 69 ~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-----g~R~v~i~G~~v~~~g~~lssF~~----~i~~l~l 139 (509)
T KOG2504|consen 69 FEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-----GCRTVMIAGGLVAALGLLLSSFAT----SLWQLYL 139 (509)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-----CchHHHHHHHHHHHHHHHHHHHHh----hHHHHHH
Confidence 4556788999999999999988766555 89999999995 678899999999999999988886 4666555
Q ss_pred HH-HHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Q 011112 113 LL-TAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLL 191 (493)
Q Consensus 113 ~~-~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i 191 (493)
.. ++.|+|.+....+...++..+++ ++|+.+.|+...+..+|..+-|.+..++.+.+|||+.+++.+.+.+-.++
T Consensus 140 t~gvi~G~G~~~~~~paiviv~~YF~----kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~ 215 (509)
T KOG2504|consen 140 TFGVIGGLGLGLIYLPAVVILGTYFE----KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLV 215 (509)
T ss_pred HHHHHhhccchhhhcchhhhhhhHhH----HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 44 56789999999888888887774 89999999999999999999999999999999999999998877644444
Q ss_pred Hhhcccc-ccccchhhhcc-----cccCCC-----cccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhc
Q 011112 192 SCGLVKE-NRVSTKVLKEF-----SSSNGY-----HQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKS 260 (493)
Q Consensus 192 ~~~~~~e-~~~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (493)
....+++ ..+..++..++ +..+.. ++....+..+.+. ..+++ .+..+.. .
T Consensus 216 ~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~-------~------- 276 (509)
T KOG2504|consen 216 AGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKL--SLSNL---ATLKRGP-------D------- 276 (509)
T ss_pred HHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcc--cccch---hhhhhCC-------c-------
Confidence 3333332 11111000000 000000 0000000000000 00000 0000000 0
Q ss_pred cCCCCCCchhHHHHhhHHHHHHH-HHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHH
Q 011112 261 QIPEKNNPLVIQWFHSLKAAIYS-LYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVG 339 (493)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~ 339 (493)
++ +. ...+..... =.+++|+|.++...+...+....+.......+.|.. ..|++..+...+..+.++.
T Consensus 277 ----~~-----~~-~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~ 345 (509)
T KOG2504|consen 277 ----KW-----RN-SPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVS 345 (509)
T ss_pred ----cc-----cc-cchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHh
Confidence 00 00 011111110 146788887766555444444443333222333433 5899999999998888899
Q ss_pred HHHHHHHHHHHHhcCChhH--HHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHH-HHHHh
Q 011112 340 LMLGTYTYNGYLKRLKLRR--ILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPF-LILSG 416 (493)
Q Consensus 340 ~~l~~~~~~~~~~~~~~r~--~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ 416 (493)
.+++.++.|.+.|+...++ ...++.++..++.+. .... .........+.+.+.+.+. +... ...+.
T Consensus 346 ~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~-~p~~---------~~~~~l~~~~~~fG~~~g~-~~~l~~~i~~ 414 (509)
T KOG2504|consen 346 DIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLF-LPFA---------TTYVGLIVFSILFGFCVGS-FSSLTPVILV 414 (509)
T ss_pred hhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHH-HHHh---------ccHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999887433 444444444443211 1111 1111111122222222221 1122 24688
Q ss_pred hcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 417 QLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 417 ~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
++++.++-..++|+...++.++..+||.+.|.+.|..|
T Consensus 415 ~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 415 DLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG 452 (509)
T ss_pred HHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC
Confidence 89999999999999999999999999999998888754
No 112
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.68 E-value=1.7e-14 Score=146.48 Aligned_cols=177 Identities=18% Similarity=0.191 Sum_probs=137.7
Q ss_pred hhHHH-HHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhh-HHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 10 VSFLW-LICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSA-SQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 10 ~~~~~-~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~-~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
|+..- ++|+..|+.-+........ |++++++|+|++| .|.+.+.+.++|.+ +.+.|+++||+ |-|+.+..+
T Consensus 25 W~~~~~~lC~fGF~~e~R~n~s~a~-p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-----G~K~vL~l~ 98 (511)
T TIGR00806 25 WRVLVLYLCFYGFMAQFRPGESFIT-PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-----RYKPVLVLQ 98 (511)
T ss_pred hhHHHHHHHHHHHHHHhhchHHHHH-HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHH
Confidence 44444 3555557777765333443 4567799999999 99999999999987 78999999995 567888999
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
.+...+...++.+.+ +...+.++|++.|++.+... +...++...+ |+++|+++.|+...+..+|.+++++++
T Consensus 99 ~l~Wsl~t~L~~fa~----Sl~~L~i~R~llGvaEA~~~-A~~syI~~Wf---P~kER~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 99 ALSFVCVWLLLLLGT----SVWHMQLMEVFYSVTMAARI-AYSSYIFSLV---PPSRYQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888764 57788999999999999988 8888887777 569999999999999999999999999
Q ss_pred HHhhccccHHHHHHHHHHHHHH---HHHHhhccccccc
Q 011112 167 GYALTNIEIDRIFLLFTVLPAI---QLLSCGLVKENRV 201 (493)
Q Consensus 167 g~l~~~~gw~~~f~~~~~~~~l---~~i~~~~~~e~~~ 201 (493)
++ ...+|||+-+.+.-+-... .++..+++|.+++
T Consensus 171 ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 171 QL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 99 4567999766554322221 2234467775544
No 113
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.64 E-value=5.2e-14 Score=136.59 Aligned_cols=325 Identities=13% Similarity=0.094 Sum_probs=206.5
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
.++.+.+++|+|+|.+..|.++++-.+.+.+ +|+..+++.|+ +-++.+..++++.+++..+=... ..+.
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-----g~er~l~~~Llli~~G~~iR~~~-----~~~~ 101 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-----GEERSLFLALLLIAAGILIRSLG-----GLPL 101 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-----hhHHHHHHHHHHHHHHHHHHhcc-----cHHH
Confidence 3556677889999999999999998888876 89999999875 45667777777777776654433 2334
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cHHHHHHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-EIDRIFLLFTVLPAI 188 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-gw~~~f~~~~~~~~l 188 (493)
++..-.+.+.|.+...+...+++.+-+ +++-+..+|+|.....+|..+++.+.-.+.++. |||.....-+.++++
T Consensus 102 L~~gt~l~G~gIav~nVLLPslIK~~F----pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~all 177 (395)
T COG2807 102 LFLGTLLAGAGIAVINVLLPSLIKRDF----PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALL 177 (395)
T ss_pred HHHHHHHHHhhHHHHHHhhhHHHHhhc----ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHH
Confidence 555555667777666555555555444 588999999999999999999999999998887 799988777766655
Q ss_pred HHHHhhccccc-cccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCC
Q 011112 189 QLLSCGLVKEN-RVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNN 267 (493)
Q Consensus 189 ~~i~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (493)
.++.++ |.. +++..+ .++ + .
T Consensus 178 Al~~Wl--Pq~~r~~~~~------~~~------------------------------~-------~-------------- 198 (395)
T COG2807 178 ALLIWL--PQALREQAAS------IAT------------------------------K-------L-------------- 198 (395)
T ss_pred HHHHHh--hhcccccccc------ccc------------------------------c-------c--------------
Confidence 555554 432 211100 000 0 0
Q ss_pred chhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011112 268 PLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTY 347 (493)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~ 347 (493)
+ +-..+.|+|..|.+.+|+-+....+......++.++. +.|+|+++.|.+.....+..+..++..
T Consensus 199 ----------~----~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~ 263 (395)
T COG2807 199 ----------V----SVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLI 263 (395)
T ss_pred ----------c----cccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHH
Confidence 0 0112457888888887766644443333333344443 479999999977655566666666665
Q ss_pred HHHHhcC-ChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHH-HhhcCCCCchH
Q 011112 348 NGYLKRL-KLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLIL-SGQLCPPGIEG 425 (493)
Q Consensus 348 ~~~~~~~-~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~g 425 (493)
-.+.+|. +.|+......+++.+ ++..+.+... ...+.| ..+.+...+..+.-.+++ ..+..+++..+
T Consensus 264 P~la~R~~n~r~~~~~~~~~~l~-G~~G~~~~P~-------~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa 332 (395)
T COG2807 264 PLLARRSKNQRPLVVLALLLMLV-GLVGLLLAPG-------QLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAA 332 (395)
T ss_pred HHHHHHhcccchHHHHHHHHHHH-HHHHHHHhhh-------hHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHH
Confidence 5555544 344444444444443 3443332211 111222 111111112122212333 44556688888
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 426 TLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 426 t~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
...|..++++++=...||.+.|.+-|..|
T Consensus 333 ~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 333 ALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 88999999999888999999999999864
No 114
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.63 E-value=7.9e-14 Score=146.96 Aligned_cols=377 Identities=14% Similarity=0.130 Sum_probs=208.2
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
..+.+++..|+|-+ ....|+.+...++-++ .|+.|.++|.+ +||..++.+.++.+++...++.++ +...
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-----GRr~~~i~g~~l~vvG~Iv~atA~----~~~~ 133 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-----GRRYFFIIGSLLGVVGSIVCATAQ----NMNT 133 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-----cchHHHHHHHHHHHhHHHHhhcCC----cHHH
Confidence 34456677889954 5577888877777665 79999999995 688899999999999999988876 5677
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQ 189 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~ 189 (493)
++..-.+.++|.+.+.. .+..++|+.+ .+.|+...++...........++.++..+..+.+|||.|++..++..+.
T Consensus 134 ~iag~~l~GvgaG~~~~-~~~~isEl~p---~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~ 209 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQEL-AALAISELVP---NKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIA 209 (599)
T ss_pred HHHHHHHHHHhhHHHHH-HHHHHHHhcc---cchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHH
Confidence 88898999999888875 4556889884 4777766655555444544567777777766779999999998877766
Q ss_pred HHHh-hcc-ccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCC-CCC
Q 011112 190 LLSC-GLV-KENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIP-EKN 266 (493)
Q Consensus 190 ~i~~-~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 266 (493)
++.+ ++. |.++++.+. ++. ++.+++. ..|-.+... ....-.. .+..+++.... ..|
T Consensus 210 ~vl~~~fY~PP~~~~~~~-~~~---s~~~~l~-----~lD~IG~~L-----~~~Gl~L-------fLlgl~wgG~~~~~W 268 (599)
T PF06609_consen 210 LVLIFFFYFPPPRAQLHG-RKL---SKREQLK-----ELDWIGIFL-----FIAGLAL-------FLLGLSWGGYPYYPW 268 (599)
T ss_pred HHHHHHHhCCCchhhhcc-ccC---cHHHHHH-----HhhHHHHHH-----HHHHHHH-------HHHHHhccCCCCCCC
Confidence 5443 333 322211100 000 0000000 000000000 0000000 11122222222 134
Q ss_pred Cc------hhH--------HHHhhHHHHHHHH--HHhhcccchHH-HHHHHHHHHhcccCCCcceeeeeeccCCCCH---
Q 011112 267 NP------LVI--------QWFHSLKAAIYSL--YSAFRQPEILR-PMAWFFLAHVAVPNLSTVMFYYQTEILNLEA--- 326 (493)
Q Consensus 267 ~~------~~~--------~~~~~~~~~~~~~--~~~l~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~--- 326 (493)
.+ +.. .+.+.....-+++ ++++|+++.+. .++..|+....+.......+......++-|+
T Consensus 269 ~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~ 348 (599)
T PF06609_consen 269 KSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISI 348 (599)
T ss_pred CCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccc
Confidence 33 100 0111110000111 36677755433 3333333221111111111111111233332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHH
Q 011112 327 SFLGTARVVGWVGLMLGTYTYNGYLKRLKL-RRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQ 405 (493)
Q Consensus 327 ~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~-r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 405 (493)
...++......++...|+.+.+.+..+.++ |+.++++.+++.+. +-.+..... ++.-...+...+.+...+
T Consensus 349 ~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~-~Gama~~~~-------~n~~~~i~~~~l~g~giG 420 (599)
T PF06609_consen 349 TEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAF-CGAMAAVRP-------DNKNAAIAFLVLAGFGIG 420 (599)
T ss_pred ceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHH-HHHHHHccC-------CCcchHHHHHHHHHHhHH
Confidence 245666667777888888777777776554 44445665555432 111222211 121122233344444445
Q ss_pred hhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhH
Q 011112 406 FKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLA 450 (493)
Q Consensus 406 ~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~ 450 (493)
+...+..+..+-.+|++.-|++.|+..++..+|+++|..+...+.
T Consensus 421 ~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 421 GILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 555566666777899999999999999999999999977654443
No 115
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.60 E-value=3.3e-15 Score=139.33 Aligned_cols=369 Identities=15% Similarity=0.127 Sum_probs=215.8
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchh-HHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIP-YLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~-~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
.++..+.+.+.+++.++..++-+++.+|..+ ..+.|++.||. .+-|. .++.+.+ ..++-++++. ....+.+|
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~----fgir~gtii~~~f-v~~GqliFa~-Ggi~~aFw 137 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRR----FGIRLGTIILCIF-VFLGQLIFAA-GGISHAFW 137 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhh----hhhhHHHHHHHHH-HHHHHHHHHh-chHHHHHH
Confidence 3445566778888888888888889999887 67899999984 22332 2333333 3344443332 22335789
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc-------HHHH--H
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE-------IDRI--F 179 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g-------w~~~--f 179 (493)
.....|++.|+|.-...++-+.++...++ -+|.+.++|+.....-+|+.+-..+.+++++..+ -+.. -
T Consensus 138 ~M~~GRF~FGIGgESlAVaQN~yav~wFK---GKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~ 214 (459)
T KOG4686|consen 138 TMLAGRFLFGIGGESLAVAQNKYAVYWFK---GKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLW 214 (459)
T ss_pred HHHhhheeeccCchhhhhhhcceeEEEec---CccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHH
Confidence 99999999999887777766777665554 4889999999999999999988888888887533 1100 0
Q ss_pred HHHHHHHHHHHHHh-hc--cccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhh
Q 011112 180 LLFTVLPAIQLLSC-GL--VKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFK 256 (493)
Q Consensus 180 ~~~~~~~~l~~i~~-~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
.+.+.......+.+ +- .-+++ .+ ++.+++.-..+|.|+.+|
T Consensus 215 l~~~~~tc~~slical~lg~~D~r-Ae-------rilh~e~g~~Ge~pkLtd---------------------------- 258 (459)
T KOG4686|consen 215 LCFEVKTCKQSLICALSLGLSDDR-AE-------RILHLEEGFLGEEPKLTD---------------------------- 258 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhH-HH-------HHHhhhcCcccCCccccc----------------------------
Confidence 11111111111111 11 11111 11 000000000000000000
Q ss_pred hhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhc-ccCCCcceeeeeeccCCCCHHHHHHHHHH
Q 011112 257 IRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVA-VPNLSTVMFYYQTEILNLEASFLGTARVV 335 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~g~s~~~~gl~~~~ 335 (493)
. ++ + .|.+|......++.+.+ +|. .+.-+.+.++.+|+|+...+.+...
T Consensus 259 --------------------v----~~----f-~ppfw~~~iicv~yyva~fPF-i~lg~~fF~~rfGlS~~~a~~i~s~ 308 (459)
T KOG4686|consen 259 --------------------V----NT----F-YPPFWVLVIICVLYYVAWFPF-ITLGPMFFQKRFGLSAVSAGNILST 308 (459)
T ss_pred --------------------c----cc----c-CccHHHHHHHHHHHHHHHHHH-hhhhHHHHHHhhCCChhhccchhhh
Confidence 0 00 1 23344332222222222 222 2222446677799999998877444
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILS 415 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 415 (493)
....+.+.+++.|.+.||+|++...+.+.++..+.+=.. ...+.++ |.. .+ .+.+..+...-+..+..+
T Consensus 309 vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~-l~Ft~ls-----Py~----~m-~~lGLsysllAcslWP~v 377 (459)
T KOG4686|consen 309 VYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG-LFFTFLS-----PYT----SM-TFLGLSYSLLACSLWPCV 377 (459)
T ss_pred hhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh-HHhhhcc-----HHH----HH-HHHhhhHHHHHHHHhhhh
Confidence 444444556788999999999988888777766543111 1111121 111 11 111111122222234567
Q ss_pred hhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCCCC
Q 011112 416 GQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKGAT 489 (493)
Q Consensus 416 ~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 489 (493)
+.+.|+++-||++|.+++++|+|-++.+.+.|.+.|+ +++|+.+-..+.++..++++....++.+.|+..
T Consensus 378 a~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~----~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~ 447 (459)
T KOG4686|consen 378 ASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG----DGSYDNLEAFFLIIGLMALTSVGILFYLNKKQS 447 (459)
T ss_pred hhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC----CCchhhHHHHHHHHHHHHHHHHHHHhheecccc
Confidence 8889999999999999999999999999999999986 345666666677777777777776777776543
No 116
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.59 E-value=1.9e-13 Score=135.63 Aligned_cols=265 Identities=14% Similarity=0.167 Sum_probs=171.8
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-------------
Q 011112 106 STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN------------- 172 (493)
Q Consensus 106 ~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~------------- 172 (493)
+++.+++..++.+.|.+..++..+.++.++.+ ++++.+.+++...+..+|..+||.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~---~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGP---IETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCC---cchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 67788899999999999999999999999984 46788889999999999999999999987731
Q ss_pred ---ccHHHHHHHHHHHHHHHHHHhhcc--ccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhh
Q 011112 173 ---IEIDRIFLLFTVLPAIQLLSCGLV--KENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNK 247 (493)
Q Consensus 173 ---~gw~~~f~~~~~~~~l~~i~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (493)
.+|++++++.+.+..+..+.+.+. ||.++++.+ + + ++ ++ +.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~----------~-----~----~~-----~~--------~~-- 131 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVA----------R-----V----SS-----GD--------TT-- 131 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccc----------c-----c----cc-----cc--------cc--
Confidence 479999997766555555444333 443221100 0 0 00 00 00
Q ss_pred hhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeec--cCCCC
Q 011112 248 KNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTE--ILNLE 325 (493)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~g~s 325 (493)
+ + ++.+|+|.++...+..|+......+.....+.|+.+ .+|++
T Consensus 132 ----------------------------~-~------~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s 176 (310)
T TIGR01272 132 ----------------------------Q-K------TSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLP 176 (310)
T ss_pred ----------------------------c-h------hhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Confidence 0 0 112344555544444444232333333444556653 37999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHH
Q 011112 326 ASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQ 405 (493)
Q Consensus 326 ~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 405 (493)
+.+.+........+.++|.++.+++.||++.||.+.++.++..+..++ .... +....... ..+.....+
T Consensus 177 ~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l-~~~~---------~~~~~~~~-~~l~g~~~s 245 (310)
T TIGR01272 177 EDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIG-AALT---------HGYVAMWF-VLALGLFNS 245 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH-HHHc---------CCHHHHHH-HHHHHHHHH
Confidence 999999988899999999999999999999999888776666554321 1111 11110111 112222222
Q ss_pred hhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 406 FKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 406 ~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
..+....+...+..|+ ..+++.++. ..+.+|+.+.|.+.|.+.|..|.
T Consensus 246 ~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 246 IMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred HHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccc
Confidence 2233335667676665 356677775 67789999999999999998765
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.53 E-value=5.4e-13 Score=135.04 Aligned_cols=175 Identities=15% Similarity=0.160 Sum_probs=134.4
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhC----CCHhhHHHHHHHH-HhhHhhhhhhhhcccccccCCCCchhH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLK----FSPSASQFVSAVA-FFPWSIKPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g----~s~~~~g~~~s~~-~l~~~~~~~~G~lsDr~~~~g~~rr~~ 82 (493)
|++.++.+...-+-.-|++ -....+..|+..+++ .|+++..-..+.+ .+.|....+.|+++||+ .++|+.
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~----LG~~~t 94 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRV----LGTRRT 94 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh----cchhHH
Confidence 4566665655556666663 445555667777777 9988765555554 56776667899999997 578889
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 83 LVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 83 ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
+.+|.++.+++.+.++..... ....+.+...+.++|.+..=+...+++.|+.++++++ |-..+++++.+.++|+.++
T Consensus 95 I~lGail~~iGh~~L~~~~~~--~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~ 171 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVS--GPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIA 171 (498)
T ss_pred HHHHHHHHHHHHHHHhccccc--cccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHH
Confidence 999999999999988876311 2334567777777999999888999999999876655 7778999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHH
Q 011112 163 SLLGGYALTNIEIDRIFLLFTVLPAIQL 190 (493)
Q Consensus 163 ~~i~g~l~~~~gw~~~f~~~~~~~~l~~ 190 (493)
|.+.+++.+++||+..|-+.++-..+.+
T Consensus 172 p~i~~~~~~~~g~~~gF~~aavGm~~gl 199 (498)
T COG3104 172 PIITGLLAINYGWHVGFGLAAVGMIIGL 199 (498)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998775433333
No 118
>PTZ00207 hypothetical protein; Provisional
Probab=99.51 E-value=6.2e-11 Score=125.87 Aligned_cols=155 Identities=13% Similarity=0.133 Sum_probs=118.3
Q ss_pred HHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccc--hhhHHHH
Q 011112 33 VSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFF--RSSTWHL 110 (493)
Q Consensus 33 ~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~--~~~~~~l 110 (493)
..+.+++++|+|.++++++.++.......+++.|+++||+ ++|+.++++.+++.++.++++++.+. ..+++.+
T Consensus 49 ~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~-----G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l 123 (591)
T PTZ00207 49 ISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYL-----GPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRL 123 (591)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence 3455688999999999998776332222477889999995 68889999999999999888876211 1357788
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHH-HHHHHHHhhccccHHHHHHHHHHHHHHH
Q 011112 111 IVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGIC-GSLLGGYALTNIEIDRIFLLFTVLPAIQ 189 (493)
Q Consensus 111 ~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~l-g~~i~g~l~~~~gw~~~f~~~~~~~~l~ 189 (493)
.+.|++.|+|.+..++.....+.+.++ ++||++.|+......+|.++ +++..+++. .+|++.|++.++++++.
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp----~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFP----SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHH
Confidence 899999999998888887777777662 78999999999999999985 555555554 36888898888888777
Q ss_pred HHHh-hcccc
Q 011112 190 LLSC-GLVKE 198 (493)
Q Consensus 190 ~i~~-~~~~e 198 (493)
.+.+ .++++
T Consensus 198 ~ll~~~~vr~ 207 (591)
T PTZ00207 198 GILAIVFMRL 207 (591)
T ss_pred HHHHHhheeC
Confidence 6544 34443
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.37 E-value=5.2e-10 Score=115.83 Aligned_cols=313 Identities=17% Similarity=0.161 Sum_probs=188.1
Q ss_pred hHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHh--hhhhHHHHHHHHHHHH
Q 011112 58 PWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNL--GSAMADVVVDAMIAEA 135 (493)
Q Consensus 58 ~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~ali~~~ 135 (493)
+....|+.|.++||+ +||..+.+....+.+..+.+.+.. + ++++ +.++ +.+.......++++|.
T Consensus 75 ~~i~s~~iG~lSD~~-----grk~~L~~~~~~~~l~~~~~~~~~-----~-~~~~---~~~l~g~~~~~~s~~~a~vadi 140 (463)
T KOG2816|consen 75 TLISSPLIGALSDRY-----GRKVVLLLPLFGTILPALCLLFQG-----Y-WFFL---LLGLSGGFSAIFSVGFAYVADI 140 (463)
T ss_pred HHHHHhhhHHhhhhh-----hhhhhHHHHHHHHHHhHHHHHHHH-----H-HHhh---hcccccchhhhhhhhhhheeec
Confidence 344489999999994 788888888888887777665542 2 2222 3222 2223344567788888
Q ss_pred hhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHh-hccccccccchhhhcccccCC
Q 011112 136 AKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRVSTKVLKEFSSSNG 214 (493)
Q Consensus 136 ~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~~~~~~~~~~~~~~ 214 (493)
.++ ++|....|+.......+..++|.+++.+....|.-.+|++..+..++..+.. +++||+..+.+.++. +
T Consensus 141 s~~---~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~-----~ 212 (463)
T KOG2816|consen 141 SSE---EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA-----T 212 (463)
T ss_pred cch---hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc-----c
Confidence 854 7999999999999999999999999999999999999999887776666543 568887654321100 0
Q ss_pred CcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchH
Q 011112 215 YHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEIL 294 (493)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (493)
.+ ..+++.. .+ . +..+..+.....=++|..+
T Consensus 213 ~~---------~~~~~~~-----------~~-------~----------------------~~~~~~~~~~~~~~~r~~l 243 (463)
T KOG2816|consen 213 LR---------ELTPGSL-----------DS-------S----------------------HVADAFQSLTKVGPDRLLL 243 (463)
T ss_pred cc---------ccCCCcc-----------cc-------h----------------------hhhhhhhhhcccCCCccch
Confidence 00 0000000 00 0 1111111221111223333
Q ss_pred HHHHHHHHHH-hcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCChhHHHHHHHHHHHHHhh
Q 011112 295 RPMAWFFLAH-VAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYT-YNGYLKRLKLRRILLLTQVGLSILSF 372 (493)
Q Consensus 295 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~-~~~~~~~~~~r~~l~~~~~~~~~~~l 372 (493)
...+..++.. ..........++|+...+|+++.+.+...........++..+ ...+.+.++.++.+..+.....+..+
T Consensus 244 ~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~ 323 (463)
T KOG2816|consen 244 LLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLL 323 (463)
T ss_pred HHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHH
Confidence 3333333222 222223324567777779999999997644444444454444 34666777888876666666555422
Q ss_pred hhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHh
Q 011112 373 LDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASS 452 (493)
Q Consensus 373 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~ 452 (493)
. ..+. + ....++. .....+..........+.++...+++++|+.+++.+.+..+...++|.+-+.+...
T Consensus 324 ~-~af~--~------~~w~~~~--~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 324 L-FAFA--T------ETWMMFA--AGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred H-HHHh--c------cchhhhH--HHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 2 1111 1 1111111 11122222223333457899999999999999999999999999998887777654
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.36 E-value=6.7e-14 Score=148.03 Aligned_cols=392 Identities=17% Similarity=0.174 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
+..+++..++|+..+ .....+.. ++++|+++.++.|++.+.+-++..+ ..+.+++.+| .+|-+|+-.|.++.
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~ltt-iErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-----~hrprwig~g~~~~ 78 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTT-IERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-----GHRPRWIGIGALLM 78 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcceeeecHHHH
Confidence 344555667785543 66566554 5888999999999999999888776 6778888887 47778888999998
Q ss_pred HHHHHHHhhccc-------------------------------------------c---hhhHHHHHHHHHHHHhhhhhH
Q 011112 91 LVPWLILGLNAF-------------------------------------------F---RSSTWHLIVLLTAQNLGSAMA 124 (493)
Q Consensus 91 ~~~~~~~~~~~~-------------------------------------------~---~~~~~~l~~~~~l~~~~~~~~ 124 (493)
.++.+++++.+- . ...+..+++..++.|+|.+..
T Consensus 79 ~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl 158 (539)
T PF03137_consen 79 GLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPL 158 (539)
T ss_dssp -------------------------------------------------------------------------SSS----
T ss_pred HHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCC
Confidence 888888765430 0 012334556667788999999
Q ss_pred HHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc---------------------c-HHHHHHHH
Q 011112 125 DVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI---------------------E-IDRIFLLF 182 (493)
Q Consensus 125 ~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~---------------------g-w~~~f~~~ 182 (493)
.+...+++-|-++ +++.+...|+......+|+++|-++|+.+.+.+ | |-.-|++.
T Consensus 159 ~tLG~tYiDDnv~---~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~ 235 (539)
T PF03137_consen 159 YTLGITYIDDNVS---KKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLIC 235 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceeeeeccccc---cccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHH
Confidence 9999999988874 477888899999999999999999999776421 1 44556666
Q ss_pred HHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhccC
Q 011112 183 TVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQI 262 (493)
Q Consensus 183 ~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (493)
+.+.++..+..++.|++-+......+....++ ++.++ .++.... ++ ...+
T Consensus 236 g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~-~~~~~-----~~~~~~~-~~------~~~~----------------- 285 (539)
T PF03137_consen 236 GILLFLSAIPLFFFPKKLPGTSERQEEKESSE-RKEED-----SDKDSFK-DP------KSKK----------------- 285 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHcCCccCCCcccccchhhhhh-cchhh-----hhhhccc-cc------cccc-----------------
Confidence 65554444545555643222200000000000 00000 0000000 00 0000
Q ss_pred CCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHH-HHHHHHHHH
Q 011112 263 PEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTA-RVVGWVGLM 341 (493)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~-~~~~~~~~~ 341 (493)
...+..|+..+.++++++||.+....+-.........+..+-.+.|++.+++.++.++.++ ..+...+.+
T Consensus 286 ---------~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~ 356 (539)
T PF03137_consen 286 ---------SFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAA 356 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------chhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhh
Confidence 0111456666778899999987665544333334444555556788888899999888776 444555667
Q ss_pred HHHHHHHHHHhcCC--hhHHHHHHHHHHHHHhhh-h-hhheecccc----------------------------------
Q 011112 342 LGTYTYNGYLKRLK--LRRILLLTQVGLSILSFL-D-IVLVSRMNL---------------------------------- 383 (493)
Q Consensus 342 l~~~~~~~~~~~~~--~r~~l~~~~~~~~~~~l~-~-~~~~~~~~~---------------------------------- 383 (493)
+|.+++|.+.+|++ .|+......++..++.+. . ..+..-.+.
T Consensus 357 ~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~ 436 (539)
T PF03137_consen 357 LGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNG 436 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcc
Confidence 77777787777653 455444444443332211 0 001100000
Q ss_pred --ccCcc--C--ceEe--eehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhh-hhhhhHhHHHHhHHh
Q 011112 384 --TVGIS--D--KTMV--LYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNF-GSTVGSFFGAGLASS 452 (493)
Q Consensus 384 --~~g~~--~--~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~l-g~~~~~~i~g~l~~~ 452 (493)
..|.. . ..++ ++...+..+......+|.+....|.+|+++|+.+.|+...+.++ |..-||.+-|.+.|.
T Consensus 437 ~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 437 SATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 00110 0 0011 11112222333445667666788999999999999999988774 667789999988885
No 121
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.29 E-value=1.5e-10 Score=119.90 Aligned_cols=179 Identities=11% Similarity=0.075 Sum_probs=125.0
Q ss_pred HHHHHHHHhHH-HhHHHHHHHHHHhhhCCCH--------hhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 16 ICLIYFTQGFR-SFVWTAVSYQLKDKLKFSP--------SASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 16 ~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~--------~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
+...+++.+.. .......+++++ +.|.++ ++.+...++..+...+ +++.|.++||+ +||+.++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-----g~r~~l~~ 286 (418)
T TIGR00889 213 FFFFSMLLGAPLQITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-----GIKKVMLL 286 (418)
T ss_pred HHHHHHHHHhHHHHHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHH
Confidence 44444443332 344444556655 466554 4557766666665554 78899999995 67788888
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHH-HHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSW-LAMAFGGICGSL 164 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~-~~~~~G~~lg~~ 164 (493)
+.++..++...+..........+.+++..++.+++.+...+....++.|.. |+++|++.+|+.+ ....+|..+||.
T Consensus 287 ~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~---p~~~~g~~~g~~~~~~~~lg~~iGp~ 363 (418)
T TIGR00889 287 SLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEV---PVHIRASAQGLFTLMCNGFGSLLGYI 363 (418)
T ss_pred HHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 888777776555553211112345566778888888887777788888887 4589999999997 567899999999
Q ss_pred HHHHhhcc------ccHHHHHHHHHHHHHHHHHH-hhccccccccc
Q 011112 165 LGGYALTN------IEIDRIFLLFTVLPAIQLLS-CGLVKENRVST 203 (493)
Q Consensus 165 i~g~l~~~------~gw~~~f~~~~~~~~l~~i~-~~~~~e~~~~~ 203 (493)
++|++.++ +||+.+|++.+++.++..+. .+++||+.+..
T Consensus 364 l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 364 LSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 99999987 46999999888777766654 35677765443
No 122
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.28 E-value=6.7e-11 Score=121.17 Aligned_cols=189 Identities=17% Similarity=0.129 Sum_probs=136.0
Q ss_pred hhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHh-hhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHH
Q 011112 7 VFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKD-KLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~-~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~i 83 (493)
..+|+-.++..+..|+.+.. ++.....-||+++ |.+.+.+..|++++...++..+ .|.+|+.+.|. ++-|||+
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~---~~~k~Pl- 105 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT---GSVKKPL- 105 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc---CCcccCH-
Confidence 36788888788888998886 4555666678765 5788889999999999999887 89999999985 2335555
Q ss_pred HHHHHHHHHHHHHHh-hcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILG-LNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 84 i~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
+.+.++.+++.++.. +.......-+.++++|++.|+|.+... .-.+++++... +++|.|+++....+..+|.++|
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~---~~dR~rA~a~~~~~~vlg~ilG 181 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADAST---VEDRPRAFAATSGGFVLGIILG 181 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccC---ccchHHHHHHhhhHHHHHHHHh
Confidence 577777888877763 322222256678899999999976654 46777777653 4788899999888888888888
Q ss_pred HHHHHHhhc-------cc------cHHHHHHHHHHHHHHHHHH-hhccccccccc
Q 011112 163 SLLGGYALT-------NI------EIDRIFLLFTVLPAIQLLS-CGLVKENRVST 203 (493)
Q Consensus 163 ~~i~g~l~~-------~~------gw~~~f~~~~~~~~l~~i~-~~~~~e~~~~~ 203 (493)
|.++..+.. +. -+..+-|+++++.++..+. .++++|..+..
T Consensus 182 p~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 182 PTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 888765543 11 1456667777766666643 35678876554
No 123
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.28 E-value=3.5e-10 Score=116.07 Aligned_cols=157 Identities=11% Similarity=0.039 Sum_probs=112.9
Q ss_pred HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 29 VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
.....+.++++++|.++.+.+...+.......+ .+++|+++||+ +||+.+..+.....+....+...+ +.
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~----~~ 305 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-----GKRFLMRVAAVAGVCFYAGMLMAH----SP 305 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ChHHHHHHHHHHHHHHHHHHHHHh----hH
Confidence 334567788888999999999877665554444 68999999995 455566555554444433333322 34
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPA 187 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~ 187 (493)
+..++.+++.+++.+...........|..+ ++||+++++++...++|..+|+.++|.+.++.+|+.+|++.+++.+
T Consensus 306 ~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p----~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~ 381 (393)
T PRK15011 306 AILLGLQLLNAIYIGILGGIGMLYFQDLMP----GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMII 381 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 455667777776666655555566666653 5699999999999999999999999999999999999998777766
Q ss_pred HHHHHhhcccc
Q 011112 188 IQLLSCGLVKE 198 (493)
Q Consensus 188 l~~i~~~~~~e 198 (493)
+..+..++.||
T Consensus 382 ~~~~~~~~~~~ 392 (393)
T PRK15011 382 ATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHhhcC
Confidence 66666666664
No 124
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.27 E-value=3.7e-10 Score=114.55 Aligned_cols=157 Identities=13% Similarity=0.121 Sum_probs=113.4
Q ss_pred HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 29 VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
.....+.++++++|.++.+.+...+........ .++.|+++||+ +||+.+..+.+...+........+ +.
T Consensus 218 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----g~~~~~~~~~~~~~~~~~~~~~~~----~~ 288 (375)
T TIGR00899 218 YIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-----GKRRLMLLAALAGVAFYTGLAADN----SL 288 (375)
T ss_pred HHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----cchhHHHHHHHHHHHHHHHHHHHH----HH
Confidence 344556777788999999998876655443333 67899999995 456666666555444443333322 34
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPA 187 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~ 187 (493)
+...+.+++.+++.+...+.....+.|..+ ++++++++++....++|..+|+.++|.+.++.||+..|++.+++.+
T Consensus 289 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~ 364 (375)
T TIGR00899 289 WALLMLQLLNAIFIGILAGIGMLYFQDLMP----GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLI 364 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 455667777788777777677777777653 4567999999999999999999999999999999999998887766
Q ss_pred HHHHHhhcccc
Q 011112 188 IQLLSCGLVKE 198 (493)
Q Consensus 188 l~~i~~~~~~e 198 (493)
+..+..+++||
T Consensus 365 ~~~~~~~~~~~ 375 (375)
T TIGR00899 365 VALFCLLLIKD 375 (375)
T ss_pred HHHHHHheecC
Confidence 66655555554
No 125
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.25 E-value=6.9e-10 Score=114.78 Aligned_cols=161 Identities=12% Similarity=0.003 Sum_probs=118.4
Q ss_pred HHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 30 WTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
....+.++++.+|.++.+.|++.+...++..+ .++.|++.|| .++++.+..+.....++...+...+ +.+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~----~~~ 313 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-----ARPGLLMLLSTLGSFLAVGLFGLMP----MWI 313 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-----cCcchHHHHHHHHHHHHHHHHHccc----hHH
Confidence 34456677776999999999988887777666 6788999997 2445566666666666655555443 334
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
...+..++.+++.+...+...+++.|.. |++.||++.|++.....+|..+|+.+.|++.+..|++..+++.+...++
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQT---PDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC---CHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 4556666777777776666677777777 4588999999999999999999999999999999999888887766555
Q ss_pred HHH-Hhhcccccccc
Q 011112 189 QLL-SCGLVKENRVS 202 (493)
Q Consensus 189 ~~i-~~~~~~e~~~~ 202 (493)
..+ ....+||.++.
T Consensus 391 ~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 391 IGVLLLLVLGELRRF 405 (417)
T ss_pred HHHHHHHhccccccc
Confidence 544 34556765543
No 126
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.23 E-value=5.2e-10 Score=117.55 Aligned_cols=177 Identities=12% Similarity=0.048 Sum_probs=113.6
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.+..|.+.+.+++..... .....+|.|+++++|.|..+.+...++..++..+ ++++|+++||+ +||+.++.
T Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-----g~r~~~~~ 329 (467)
T PRK09556 255 LKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-----NGRRALVA 329 (467)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCchHHH
Confidence 45556666666666544432 3455677888888999999999888877777766 78999999996 23333333
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHH-HHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAF-GGICGSL 164 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~-G~~lg~~ 164 (493)
...+..++...+..... ++.....+.+++.+++.............|.. |+++||.+.|+.+...++ |..++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---p~~~~g~a~gi~~~~g~l~g~~~~~~ 404 (467)
T PRK09556 330 CIALALIIFTLGVYQHA--TSEYMYLASLFALGFLVFGPQLLIGVAAVGFV---PKKAIGVANGIKGTFAYLFGDSFAKV 404 (467)
T ss_pred HHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc---chhhHHHHHHHHHHHHHHHhHHHHhh
Confidence 32222222221222111 13334445555555432222222234555776 568999999999999886 7799999
Q ss_pred HHHHhhc------------cccHHHHHHHHHHHHHHHHHHhh
Q 011112 165 LGGYALT------------NIEIDRIFLLFTVLPAIQLLSCG 194 (493)
Q Consensus 165 i~g~l~~------------~~gw~~~f~~~~~~~~l~~i~~~ 194 (493)
+.|++.+ ..+|+..|++.++..++..+..+
T Consensus 405 ~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 405 GLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 9999999 67899999887666555544433
No 127
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.23 E-value=2e-10 Score=120.21 Aligned_cols=174 Identities=10% Similarity=0.001 Sum_probs=119.3
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+.++......++..+.. .....+++|++ ++|.+..+.+...++..+...+ +|+.|+++||... +.+|+..+..+
T Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~ 316 (455)
T TIGR00892 239 THRGFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWI-RPHVQYLFSFA 316 (455)
T ss_pred cCchHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-CHHHHHHHHHH
Confidence 3444443434344433332 33445667765 5899999999988887776665 7999999997321 11222222233
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
.+...++.+.+...+ +.+.+++.+++.+++.+...+...+++.|..+ ++++++.+|++.....+|..+||.++
T Consensus 317 ~~~~~l~~ll~~~~~----~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~---~~~~g~~~g~~~~~~~lg~~igp~i~ 389 (455)
T TIGR00892 317 LLFNGLTHLLCALAG----DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVG---AQRFSSAVGLVTIVECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHHHHHHHhc----hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhh---HHHHhhHHhHHHHHHHHHHHccccce
Confidence 333333333333332 45566777888888888888888888888874 58899999999999999999999999
Q ss_pred HHhhccc-cHHHHHHHHHHHHHHHHH
Q 011112 167 GYALTNI-EIDRIFLLFTVLPAIQLL 191 (493)
Q Consensus 167 g~l~~~~-gw~~~f~~~~~~~~l~~i 191 (493)
|.+.++. +|++.|++.+++.++..+
T Consensus 390 G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 390 GRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999877 599999998876555443
No 128
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.22 E-value=4.3e-10 Score=113.58 Aligned_cols=170 Identities=16% Similarity=0.187 Sum_probs=120.2
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.+..+.+...++...+.. ......+++. +++|.++++.+...++..+...+ ++++|+++||+ +||+.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~ 275 (377)
T TIGR00890 202 LRTPQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-----GRQKTMSI 275 (377)
T ss_pred HcCccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhhhhhH
Confidence 44445554544455544432 2333345554 56899998888888777777666 78999999995 56667777
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.+...++.+.+...++. ....++...++.+++.+...+...+++.|.. |+++|+++.|+......+|..+++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~~~~~~ 350 (377)
T TIGR00890 276 VFGISAVGMAAMLFIPML--NDVLFLATVALVFFTWGGTISLFPSLVSDIF---GPANSAANYGFLYTAKAVAGIFGGLI 350 (377)
T ss_pred HHHHHHHHHHHHHHcccc--hhHHHHHHHHHHHHHhccchhccHHHHHHHh---hhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence 777777776666555421 1222334455666666666666677888887 45899999999999999999999999
Q ss_pred HHHhhccccHHHHHHHHHHHHHH
Q 011112 166 GGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 166 ~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
.|.+.++.||++.|.+.+++.++
T Consensus 351 ~g~l~~~~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 351 ASHALTEIGFEYTFIVTGAFALT 373 (377)
T ss_pred HHHHHhhhchhhHHHHHHHHHHH
Confidence 99999999999999987765443
No 129
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.21 E-value=1.4e-09 Score=114.97 Aligned_cols=166 Identities=13% Similarity=0.119 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHH-Hhhcccchh
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLI-LGLNAFFRS 105 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~-~~~~~~~~~ 105 (493)
.....+++++++++|.+..+.+...+...++..+ .++.|+++||+ +||+.++.+.+...+.... +..... .
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~--~ 340 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-----GRRPFVILGSVALFVLAIPAFILINS--N 340 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHHhC--C
Confidence 4556778888888899988777666666666655 68899999995 5666666665433322222 222111 1
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cHHHHHHHHHH
Q 011112 106 STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-EIDRIFLLFTV 184 (493)
Q Consensus 106 ~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-gw~~~f~~~~~ 184 (493)
+...+++.+++.+++.+.......+++.|+. |++.||+..|..+....+++.++|.+.+++.+.. +|+.+++...+
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~---p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~ 417 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMF---PTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMV 417 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 3445566777777665555555667777877 5689999999755556666778999999988754 47777766666
Q ss_pred HHHHHHHHhhccccccccc
Q 011112 185 LPAIQLLSCGLVKENRVST 203 (493)
Q Consensus 185 ~~~l~~i~~~~~~e~~~~~ 203 (493)
.+++..+..+++||++++.
T Consensus 418 ~~~i~~~~~~~~pes~~~~ 436 (490)
T PRK10642 418 VAVIGLITGVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHhccccCCC
Confidence 6555555566779987654
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.20 E-value=1.5e-09 Score=111.23 Aligned_cols=175 Identities=18% Similarity=0.101 Sum_probs=116.4
Q ss_pred hhhchhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHH
Q 011112 6 NVFGVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~i 83 (493)
+.++.+..+......+.... .......++++++++.|.|..+.+...+...++..+ +++.|+++||. +||..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~ 274 (390)
T PRK03545 200 LLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-----PSGFLL 274 (390)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-----chhHHH
Confidence 34444444433333333222 222344566787887899999999887777766655 78899999984 344443
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS 163 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~ 163 (493)
.+..+..++........ .+.+.+.++.++.+++.+...+..++.+.+.. +++|++++|++.....+|..+|+
T Consensus 275 -~~~~~~~~~~~~l~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~g~~~G~ 346 (390)
T PRK03545 275 -IAIALLLVCLLLLLPAA---NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLA----PDATDVAMALFSGIFNIGIGAGA 346 (390)
T ss_pred -HHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHhcchHHHHHHHHHhC----CCcHHHHHHHHHHHHHHHHHHHH
Confidence 34333333333222221 13445556666777776665555666665554 36889999999999999999999
Q ss_pred HHHHHhhccccHHHHHHHHHHHHHHHHHHh
Q 011112 164 LLGGYALTNIEIDRIFLLFTVLPAIQLLSC 193 (493)
Q Consensus 164 ~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~ 193 (493)
+++|++.++.|++..|+..+++.++.++..
T Consensus 347 ~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 347 LLGNQVSLHLGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887776655443
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.20 E-value=9.3e-10 Score=109.77 Aligned_cols=167 Identities=24% Similarity=0.273 Sum_probs=131.7
Q ss_pred HHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchh-HHHHHHHHHHH
Q 011112 16 ICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIP-YLVISTVLSLV 92 (493)
Q Consensus 16 ~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~-~ii~~~~l~~~ 92 (493)
.....+..... .......+.+.++.+|.+..+.+...+...+...+ .+++|+++||+ +||+ .+..+..+..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i 254 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-----GRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHH
Confidence 33334444433 34455666777776699999999988888877776 78999999995 4555 77788888888
Q ss_pred HHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011112 93 PWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN 172 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~ 172 (493)
+...+...+ +.+...+..++.+++.+...+...+++.|..+ +++|++.+|.......+|..+++.+.|.+.+.
T Consensus 255 ~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~ 327 (352)
T cd06174 255 GLLLLALAP----SLALLLVALLLLGFGLGFAFPALLTLASELAP---PEARGTASGLFNTFGSLGGALGPLLAGLLLDT 327 (352)
T ss_pred HHHHHHHhc----cHHHHHHHHHHHHHHHhccchhHHHHHHhhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 777776654 35566778888899999988899999999884 58999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHhh
Q 011112 173 IEIDRIFLLFTVLPAIQLLSCG 194 (493)
Q Consensus 173 ~gw~~~f~~~~~~~~l~~i~~~ 194 (493)
.+|++.+++.+++.++..+..+
T Consensus 328 ~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 328 GGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred cCcchHHHHHHHHHHHHHHHhe
Confidence 9999999998877766655443
No 132
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.18 E-value=2.5e-09 Score=107.04 Aligned_cols=367 Identities=14% Similarity=0.085 Sum_probs=192.7
Q ss_pred hhhhchhHHHHHHH--HHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchh
Q 011112 5 KNVFGVSFLWLICL--IYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIP 81 (493)
Q Consensus 5 ~~~~~~~~~~~~~~--~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~ 81 (493)
+|.|..|++.++.. ..+.+++.=+.+.++..+.++.+| +...+-|..-++++.+.. ....-|+.|+. +-|.
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-----GLR~ 110 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-----GLRT 110 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-----chHH
Confidence 35676666663322 224444443555666677788888 666667766677766654 77888999984 5667
Q ss_pred HHHHHHHHHHHHHHHHhhcccc--hhhHH--HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHH
Q 011112 82 YLVISTVLSLVPWLILGLNAFF--RSSTW--HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAF 157 (493)
Q Consensus 82 ~ii~~~~l~~~~~~~~~~~~~~--~~~~~--~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~ 157 (493)
..+++..+.+++..+=..+... ++.++ .....-.+.+....+......-+ ++. +++++||..+..+-..+..+
T Consensus 111 a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPski-A~~--WF~~~qra~A~~~~v~~n~L 187 (480)
T KOG2563|consen 111 ALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKI-AAV--WFPPDQRAIATVLGVMGNPL 187 (480)
T ss_pred HHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHH-HHh--hCCcchhhhhhhHHHhcchH
Confidence 7778888888877654443211 12332 12222222222222222222222 222 34679999999888777778
Q ss_pred HHHHHHHHHHHhhcc------ccHHH--HHHHHHHHHHHHHHHhh-ccccccccchhhhcccccCCCcccCCCCcccCCC
Q 011112 158 GGICGSLLGGYALTN------IEIDR--IFLLFTVLPAIQLLSCG-LVKENRVSTKVLKEFSSSNGYHQVNGNESILDDE 228 (493)
Q Consensus 158 G~~lg~~i~g~l~~~------~gw~~--~f~~~~~~~~l~~i~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (493)
|.++|.++.-.+..+ ..|.. .|+....+..+.++... ..+|+|+.+...
T Consensus 188 Gvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~---------------------- 245 (480)
T KOG2563|consen 188 GVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSA---------------------- 245 (480)
T ss_pred HHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCch----------------------
Confidence 888888887777653 34654 35544444444333332 234433222000
Q ss_pred CCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhccc
Q 011112 229 DGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVP 308 (493)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 308 (493)
..+++ ++ . + ..+.+.+.++|+++...+....+....+.
T Consensus 246 ------------s~~~~----~~-~----------------------~---f~~si~~~~~n~~F~il~~~ygi~~g~F~ 283 (480)
T KOG2563|consen 246 ------------SQAAL----QD-A----------------------S---FPKSIKSCFKNRQFIILAICYGIGLGLFN 283 (480)
T ss_pred ------------hHhhh----hc-C----------------------c---HHHHHHHHHcCccHHHHHHHHhhhHHHHH
Confidence 00000 00 0 1 23356677899987655433322222222
Q ss_pred CCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHH-HHHHHHHHHhhhhhhheeccccccCc
Q 011112 309 NLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILL-LTQVGLSILSFLDIVLVSRMNLTVGI 387 (493)
Q Consensus 309 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~-~~~~~~~~~~l~~~~~~~~~~~~~g~ 387 (493)
...+.+-.- ...-|++....|...+...++.++++.+.+.+.||++.-+... +......+..+..... .. .
T Consensus 284 ~l~~~l~~~-l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~-t~------~ 355 (480)
T KOG2563|consen 284 SLSTLLNLA-LCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC-TL------F 355 (480)
T ss_pred HHHHHhhhc-cccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh-hc------c
Confidence 111111101 1224666667888888888899999999999999886544433 3333222221111111 00 0
Q ss_pred cCceEeeehh-HHHHHHHHhhHhHH-HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhh
Q 011112 388 SDKTMVLYGS-ALVDAVNQFKFMPF-LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSL 453 (493)
Q Consensus 388 ~~~~~~l~~~-~~~~~~~~~~~~~~-~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~ 453 (493)
+....++... ....++ +....|. .-+..|..-|..+++..|+.+..+++-+.+=.++-+...+..
T Consensus 356 ~~~~viv~~t~~~~g~~-~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 356 LGDSVIVFTTCGLLGFF-GTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred CCceEehhhhHHHHHHh-hcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 1111122111 111111 2234554 356778888899999998887776655544444444444433
No 133
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.16 E-value=3.5e-10 Score=97.04 Aligned_cols=125 Identities=26% Similarity=0.352 Sum_probs=100.6
Q ss_pred hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhch
Q 011112 62 KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERA 141 (493)
Q Consensus 62 ~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~ 141 (493)
+++.|+++||+ +||+.+..+.....++.+.+...+ +.+...+.+++.+++.+...+..++++.|..+ +
T Consensus 15 ~~~~g~~~d~~-----g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~ 82 (141)
T TIGR00880 15 SPLSGLLTDRF-----GRKPVLLVGLFIFVLSTAMFALSS----NITVLIIARFLQGFGAAFALVAGAALIADIYP---P 82 (141)
T ss_pred HhhHHHHHhhc-----chhHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC---h
Confidence 78899999995 566677777777777766665543 45667788889999998888889999999884 4
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhh-cccc
Q 011112 142 AFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCG-LVKE 198 (493)
Q Consensus 142 ~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~-~~~e 198 (493)
++|++..+.......+|..+++.+++.+.+..+|++.+++.+++.++..+... +.||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 88999999999999999999999999999999999999988776665554443 3454
No 134
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.16 E-value=1.9e-09 Score=112.18 Aligned_cols=177 Identities=15% Similarity=0.065 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHH
Q 011112 11 SFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTV 88 (493)
Q Consensus 11 ~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~ 88 (493)
+.++.+...++...+. ......+++++++++|.|..+.+...+++.++..+ .+++|+++||+. +++||+......+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~--~~~r~~~~~~~~~ 320 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLF--NGNRGPMNLIFAA 320 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhc--cCCccHHHHHHHH
Confidence 3445444445444433 23445667788788999999999888888777766 689999999962 1123332222111
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 011112 89 LSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGY 168 (493)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~ 168 (493)
...+....+...+.. +........+..+++...........+.|.. |+++||++.|+.+....+|..++|.+.|+
T Consensus 321 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~g~~~~p~~~g~ 395 (434)
T PRK11663 321 GILLSVGSLWLMPFA--SYVMQAACFFTIGFFVFGPQMLIGMAAAECS---HKEAAGAATGFVGLFAYLGAALSGYPLAK 395 (434)
T ss_pred HHHHHHHHHHHcccc--cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcc---cHhhHHhHHHHHHHHHHHHHHHhcccHHH
Confidence 111111111112211 1222223333333322111112223445555 46899999999999999999999999999
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHhh
Q 011112 169 ALTNIEIDRIFLLFTVLPAIQLLSCG 194 (493)
Q Consensus 169 l~~~~gw~~~f~~~~~~~~l~~i~~~ 194 (493)
+.++.||+..|+..+++.++..+.++
T Consensus 396 l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 396 VLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988877666655444
No 135
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.15 E-value=4.6e-10 Score=119.60 Aligned_cols=307 Identities=16% Similarity=0.161 Sum_probs=200.3
Q ss_pred hhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHH
Q 011112 10 VSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIST 87 (493)
Q Consensus 10 ~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~ 87 (493)
+-++.++...++.|++.+ .....+. .++++|+++.++.|++.+.+-++..+ ..++.++.-| .+|-+++-.|.
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~It-tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-----~HrPr~Ig~G~ 169 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVIT-TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-----GHRPRWIGIGL 169 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhh-hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-----cCccceeeech
Confidence 334445666678899864 4444444 45888999999999988887777765 5677888877 47778888999
Q ss_pred HHHHHHHHHHhhcc-------------------c--------------------------ch-hh-HH-HHHHHHHHHHh
Q 011112 88 VLSLVPWLILGLNA-------------------F--------------------------FR-SS-TW-HLIVLLTAQNL 119 (493)
Q Consensus 88 ~l~~~~~~~~~~~~-------------------~--------------------------~~-~~-~~-~l~~~~~l~~~ 119 (493)
++..++.+++++.+ . .+ ++ .+ .+++..++.|+
T Consensus 170 ~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI 249 (735)
T KOG3626|consen 170 VLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI 249 (735)
T ss_pred hHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc
Confidence 99999888887653 0 00 11 22 34456667788
Q ss_pred hhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-------------------cHHHHHH
Q 011112 120 GSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-------------------EIDRIFL 180 (493)
Q Consensus 120 ~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-------------------gw~~~f~ 180 (493)
|.....+....++-|-+++ ++.....|+.+....+|+++|-++|+++...+ .|..-|+
T Consensus 250 G~Tpi~tlGisYiDDnvk~---~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 250 GATPIFTLGISYIDDNVKK---KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred CCCCCccCCCccccccccc---cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 8888888888888887753 67888899999999999999999999876421 2666788
Q ss_pred HHHHHHHHHHHHhhccccccccchhhhcccccCCCcccCCCCcccCCCCCccccchhhhhhhhhhhhhhhhhhhhhhhhc
Q 011112 181 LFTVLPAIQLLSCGLVKENRVSTKVLKEFSSSNGYHQVNGNESILDDEDGFSEEKYNISTKKRKKNKKNQKKRMFKIRKS 260 (493)
Q Consensus 181 ~~~~~~~l~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (493)
+.+.+.++..+..++.|++.++.+++.+ .++.+... .+++. ++ . ++ .
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp~~~~~~~---~~~~~~~k------~~~~~---~~------~-~~-------~------- 373 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELPKSQKRKR---ARDLHVLK------TESGG---AK------S-DK-------T------- 373 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCccccccch---hhhhcccc------ccccc---cc------C-Cc-------c-------
Confidence 8887776666777777765544321100 00000000 00000 00 0 00 0
Q ss_pred cCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHH-HHHHHHH
Q 011112 261 QIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTA-RVVGWVG 339 (493)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~-~~~~~~~ 339 (493)
+.+..|+..+.++++++||.....++...+....+.+..+-+|.|+..++|.++..+-++ ..++..+
T Consensus 374 ------------~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~ 441 (735)
T KOG3626|consen 374 ------------FGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPA 441 (735)
T ss_pred ------------hhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhh
Confidence 111456666778899999987665544443334444455556788888899999888776 4556667
Q ss_pred HHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHH
Q 011112 340 LMLGTYTYNGYLKRL--KLRRILLLTQVGLSIL 370 (493)
Q Consensus 340 ~~l~~~~~~~~~~~~--~~r~~l~~~~~~~~~~ 370 (493)
..+|..++|++.+|+ ..|....+..++..++
T Consensus 442 ~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 442 AAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred hhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence 778888888888876 4555555554444443
No 136
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.15 E-value=3.9e-09 Score=108.72 Aligned_cols=180 Identities=13% Similarity=0.056 Sum_probs=115.6
Q ss_pred hhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.++.+..+...+.++++... .......|.+++ ++|.+..+.+...+...++..+ ++++|+++||+ .|||....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~----~~~~~~~~ 292 (402)
T TIGR00897 218 LFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL----GWMNTVRW 292 (402)
T ss_pred HHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh----cchhHHHH
Confidence 34555566555666665443 233445566665 5899999988877777776666 78999999996 23443332
Q ss_pred HHHHHHHHHHHHHhhccc-chhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAF-FRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS 163 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~ 163 (493)
.+.+...++...+...+. ...+.+...+..++.+++.+... +..+.+.|. ++++||++.|+.+....+|..+||
T Consensus 293 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~----~~~~~g~~~g~~~~~~~lg~~~gp 367 (402)
T TIGR00897 293 FGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYV-PLAAVFPTL----APKHKGAAMSVLNLSAGLSAFLAP 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHhh----CcchhHHHHHHHHHHHHHHHHHHH
Confidence 333323333222222111 01133344455556666655443 344555553 236899999999999999999999
Q ss_pred HHHHHhhccccHHHHHHHHHHHHHHHHHHhhcc
Q 011112 164 LLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLV 196 (493)
Q Consensus 164 ~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~ 196 (493)
.++|.+.+..||+.+|++.+++.++..+...|+
T Consensus 368 ~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 368 AIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999887766665544444
No 137
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.14 E-value=1.1e-09 Score=113.51 Aligned_cols=157 Identities=11% Similarity=0.087 Sum_probs=111.6
Q ss_pred HHHHHHHhh---hCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 32 AVSYQLKDK---LKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 32 ~~~~~l~~~---~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
..+.++.+. .+.+..+.|.+.++..+...+ .+++|+++||+ +||+.+..+..+..+..+.+++.+ +.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~l~~~~~~l~~~~~----~~ 315 (420)
T PRK09528 245 QFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-----GAKNALLLAGTIMAVRIIGSGFAT----GP 315 (420)
T ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcchhhHHHHHHHHHHHHHHHhcc----cH
Confidence 344554443 356667888888877777665 78999999995 455666676667677766666654 34
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSL-SWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLP 186 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~-~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~ 186 (493)
+.++..+++.+++.+...+....++.|.. |++.|+...+. ++....+|.++|+.++|++.|..||+..|.+.+++.
T Consensus 316 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~---~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~ 392 (420)
T PRK09528 316 LEVSILKLLHAFEVPFLLVGVFKYITLNF---DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIV 392 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Confidence 55667788888877766666666766666 44777776655 567788999999999999999999999999888776
Q ss_pred HHHHHHh-hcccccc
Q 011112 187 AIQLLSC-GLVKENR 200 (493)
Q Consensus 187 ~l~~i~~-~~~~e~~ 200 (493)
++..+.. +..++++
T Consensus 393 ~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 393 LLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHHhcCCc
Confidence 6555433 3445443
No 138
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.14 E-value=4.7e-09 Score=107.34 Aligned_cols=173 Identities=14% Similarity=0.084 Sum_probs=127.4
Q ss_pred hhhhchhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhH
Q 011112 5 KNVFGVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 5 ~~~~~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ 82 (493)
++.++.+.++.....+++... ........++++++ +|.+++++|...++..+...+ .++.|.+.||+ ++|+.
T Consensus 199 ~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-----g~~~~ 272 (382)
T TIGR00902 199 IALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-----SARDL 272 (382)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-----CHHHH
Confidence 344566666655555555333 33444566778765 999999999887776666655 67888999984 67778
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHH-HHHHHHHHH
Q 011112 83 LVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSW-LAMAFGGIC 161 (493)
Q Consensus 83 ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~-~~~~~G~~l 161 (493)
+..+.+...+....+++.+ +.+.++...++.++..+...+....++.+. |+++|++.++++. ....+|..+
T Consensus 273 l~~~~~~~~~~~~~~~~~~----~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~----~~~~~~~~q~~~~~~~~g~g~~~ 344 (382)
T TIGR00902 273 LLISAIACVGRWAIIGAIE----AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ----PGSEIAKLQALYNALAMGGLIAI 344 (382)
T ss_pred HHHHHHHHHHHHHHHHhHh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CHhhHHHHHHHHHHHHHHHHHHH
Confidence 8889888888887777654 456677788899998888877766666553 4578899999986 467799999
Q ss_pred HHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 011112 162 GSLLGGYALTNIEIDRIFLLFTVLPAIQLLS 192 (493)
Q Consensus 162 g~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~ 192 (493)
|+.++|++.|++|+ ..|++.+++.++.++.
T Consensus 345 g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 345 FTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99999999999996 5677777666544433
No 139
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.14 E-value=3.7e-09 Score=108.53 Aligned_cols=182 Identities=11% Similarity=-0.048 Sum_probs=122.6
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+..+.+...+++..+.. ......++++++ +|.+..+.|...+++.+...+ ++++|++.||. +||+.++.+
T Consensus 203 ~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-----~~~~~~~~~ 276 (393)
T PRK09705 203 FTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-----DRRKLLMLA 276 (393)
T ss_pred cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-----cchHHHHHH
Confidence 4455554555554444432 444566788775 899999999988888887776 78999999985 456666666
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
..+..++..++...+. +..... ..+.+++.+...+...+...+..+ |+++||+..|+.+....++..+||.+.
T Consensus 277 ~~l~~~~~~~~~~~~~---~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~~~~~gp~~~ 349 (393)
T PRK09705 277 LVLQLVGFCGFIWLPL---QLPVLW--AMVCGLGLGGAFPLCLLLALDHSV--QPAIAGKLVAFMQGIGFIIAGLAPWFS 349 (393)
T ss_pred HHHHHHHHHHHHHccc---hHHHHH--HHHHHHhccchHHHHHHHHHhhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666554443332 111111 223455555554555555555553 357899999999999999999999999
Q ss_pred HHhhcccc-HHHHHHHHHHHHHHHHHH-hhccccccccc
Q 011112 167 GYALTNIE-IDRIFLLFTVLPAIQLLS-CGLVKENRVST 203 (493)
Q Consensus 167 g~l~~~~g-w~~~f~~~~~~~~l~~i~-~~~~~e~~~~~ 203 (493)
|++.|+.| |+..|++.++..++..+. +.+.||++.++
T Consensus 350 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 350 GVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 99999876 888888877666655543 35567776554
No 140
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.13 E-value=4.2e-09 Score=110.25 Aligned_cols=186 Identities=17% Similarity=0.109 Sum_probs=111.4
Q ss_pred chhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchh-HHHH
Q 011112 9 GVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIP-YLVI 85 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~-~ii~ 85 (493)
+.+.+|...+..++... .......+|.+++++.|.+..+.+....++.+...+ .++.|+++||+. .+||+ ..+.
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~---~~r~~~~~~~ 327 (452)
T PRK11273 251 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF---RGNRGATGVF 327 (452)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cCCcchHHHH
Confidence 34445544444444333 234456778888888899999888877777666665 789999999962 23332 2222
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHH-HHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGI-CGSL 164 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~-lg~~ 164 (493)
...+..++.+.+...+. .+.+...+..+..+...........+++.|.. |+++||++.|+......+|.. +||.
T Consensus 328 ~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~~g~~~~g~~ 402 (452)
T PRK11273 328 FMTLVTIATIVYWLNPA--GNPTVDMACMIVIGFLIYGPVMLIGLHALELA---PKKAAGTAAGFTGLFGYLGGSVAASA 402 (452)
T ss_pred HHHHHHHHHHHHHHhcc--cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHc---ChhhhhhHHHHHHHHHHHHHHHhhhh
Confidence 22222333222222211 12222233333333332222222334556666 558999999999988888765 4899
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHhh-c-ccccccc
Q 011112 165 LGGYALTNIEIDRIFLLFTVLPAIQLLSCG-L-VKENRVS 202 (493)
Q Consensus 165 i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~-~-~~e~~~~ 202 (493)
++|++.++.||+..|+++++..++..+... + .+|+|++
T Consensus 403 v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 403 IVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRHH 442 (452)
T ss_pred hHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 999999999999999988876666554433 2 3454443
No 141
>PRK03699 putative transporter; Provisional
Probab=99.13 E-value=2.2e-09 Score=110.26 Aligned_cols=172 Identities=10% Similarity=0.096 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
++.+.+.+++..+. .......+.++++++|.|..+.+...+.+.+...+ .++.|+++||+ +||+.+.....+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~l~~~~~~~ 281 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-----DLQRILTVLAGLA 281 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-----chhhHHHHHHHHH
Confidence 34344445544433 34556778888888999999999988887777666 68899999996 4555555555554
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 91 LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
.+........+ +.+...+..++.+++.+...+...+...|..+ +++++..+.......+|..++|.+.|++.
T Consensus 282 ~~~~~~~~~~~----~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~g~~i~p~~~G~l~ 353 (394)
T PRK03699 282 LVLMYLFVNTD----DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK----VASPKLVNFILTCGTIGTMLTFVVTSPIV 353 (394)
T ss_pred HHHHHHHHHcC----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----CCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 44444443333 22233444556666665555555566555542 45677788888899999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHhhccc
Q 011112 171 TNIEIDRIFLLFTVLPAIQLLSCGLVK 197 (493)
Q Consensus 171 ~~~gw~~~f~~~~~~~~l~~i~~~~~~ 197 (493)
++.||+..++..+++.++..+.+++.+
T Consensus 354 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 354 AHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999988877666655555444
No 142
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.13 E-value=2.9e-09 Score=107.92 Aligned_cols=177 Identities=20% Similarity=0.212 Sum_probs=114.4
Q ss_pred hchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.+..+.....+++.... .......+.++++++|.+..+.+...+...+...+ .+++|+++||+. |||+.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~ 287 (399)
T TIGR00893 212 LKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLL----RRGKSLVF 287 (399)
T ss_pred hcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh----hcccchhH
Confidence 4445555555556655554 35556677788888999999999888777766665 789999999962 33211111
Q ss_pred HHHHHHHH---HHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVP---WLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 86 ~~~l~~~~---~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
......++ ........+.....+..+....+..++.+ ..+...+++.|.. |+++|+++.|+......+|..++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~g~~~~ 363 (399)
T TIGR00893 288 ARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNA---PGNIAGLTGGLINSLGNLGGIVG 363 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhc---ChhHHHHHHHHHHHHHHHhhhhh
Confidence 11111111 11111111111122233333334444444 5667788888887 45899999999999999999999
Q ss_pred HHHHHHhhcccc-HHHHHHHHHHHHHHHHHH
Q 011112 163 SLLGGYALTNIE-IDRIFLLFTVLPAIQLLS 192 (493)
Q Consensus 163 ~~i~g~l~~~~g-w~~~f~~~~~~~~l~~i~ 192 (493)
+.+.|++.++.| |++.|++.+++.++..+.
T Consensus 364 ~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 364 PIVIGAIAATTGSFAGALMVVAALALIGALS 394 (399)
T ss_pred hHHhhhhccCCCchhHHHHHHHHHHHHHHHH
Confidence 999999999988 999998887666555443
No 143
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.12 E-value=4.8e-09 Score=107.69 Aligned_cols=155 Identities=12% Similarity=0.131 Sum_probs=110.8
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
..++.++++ .|.+ +.+...+.+.+...+ +++.|++.||+ +||+.+..+..+..++...+...+ +.+.
T Consensus 237 ~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 304 (399)
T PRK05122 237 TFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-----GGLRVAIVSLLVEILGLLLLWLAP----SPWM 304 (399)
T ss_pred HHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHhc----cHHH
Confidence 444556554 5653 345555556666655 68899999995 456667677666666666555543 3345
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQ 189 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~ 189 (493)
.++.+++.+++.+...+.....+.|.. |+++||++.|+++....+|..+++.+.|++.++.||++.|++.+++.++.
T Consensus 305 ~~~~~~l~G~~~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 381 (399)
T PRK05122 305 ALIGAALTGFGFSLVFPALGVEAVKRV---PPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLG 381 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 566777888888777666666666655 56899999999999999999999999999999999999999888776665
Q ss_pred HHHhhcccccc
Q 011112 190 LLSCGLVKENR 200 (493)
Q Consensus 190 ~i~~~~~~e~~ 200 (493)
.+..++.++++
T Consensus 382 ~~~~~~~~~~~ 392 (399)
T PRK05122 382 LALTWLLYRRA 392 (399)
T ss_pred HHHHHHhcccc
Confidence 55544455443
No 144
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.12 E-value=1.7e-09 Score=109.82 Aligned_cols=163 Identities=22% Similarity=0.158 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLS 90 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~ 90 (493)
++.....++..... .......++++++++|.+..+.+...+...+...+ .+++|+++||+ +||+.++....+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~ 295 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-----GRRPVLIIFTVLA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----chHHHHHHHHHHH
Confidence 44344445554443 34555667788788999999988877777766665 78999999995 4555544333333
Q ss_pred HH-HHHHH-hhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHH-HHHHHHHHHHHHHHHH
Q 011112 91 LV-PWLIL-GLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLS-WLAMAFGGICGSLLGG 167 (493)
Q Consensus 91 ~~-~~~~~-~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~-~~~~~~G~~lg~~i~g 167 (493)
.+ +.... ..... .+.+.......+.+++.+...++.++++.|..+ +++|+++.++. .....+|..++|.++|
T Consensus 296 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 296 ALLAVPLLMALLDS--GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFP---TEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred HHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCC---ccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 22 21222 22211 234445556667777777777888999999884 47899988874 4556789999999999
Q ss_pred Hhhcccc-HHHHHHHHHHH
Q 011112 168 YALTNIE-IDRIFLLFTVL 185 (493)
Q Consensus 168 ~l~~~~g-w~~~f~~~~~~ 185 (493)
++.++.| |++.++.....
T Consensus 371 ~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 371 ALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHHcCcchhHHHHHHHH
Confidence 9999888 88877765543
No 145
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.11 E-value=4.9e-09 Score=110.83 Aligned_cols=161 Identities=14% Similarity=0.151 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHH-HHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHH---hhccc
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSA-VAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLIL---GLNAF 102 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s-~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~---~~~~~ 102 (493)
......++++.+++|.|.++.+.... ...++..+ .+++|+++||+ +||+.+..+.++..++.+.+ +..+
T Consensus 240 ~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-----g~~~~l~i~~~l~~l~~l~~~~l~~~~- 313 (491)
T PRK11010 240 FAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-----SLFRALMIFGILQGVSNAGYWLLSITD- 313 (491)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 33445567777779999999998764 44455555 68899999996 44455544444333333222 2221
Q ss_pred chhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Q 011112 103 FRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLF 182 (493)
Q Consensus 103 ~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~ 182 (493)
.+.+.+....++..++.+...+...++..++.+ .+.+++.+|+.+...++|..+++.+.|++.+..||+..|.+.
T Consensus 314 --~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~---~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~ 388 (491)
T PRK11010 314 --KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN---KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFS 388 (491)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 133334445555555555555666788888875 477889999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhccccc
Q 011112 183 TVLPAIQLLSCGLVKEN 199 (493)
Q Consensus 183 ~~~~~l~~i~~~~~~e~ 199 (493)
+++.++..+...+.+++
T Consensus 389 ~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 389 VAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 87776665555545543
No 146
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.10 E-value=7.2e-09 Score=105.86 Aligned_cols=149 Identities=14% Similarity=0.114 Sum_probs=104.4
Q ss_pred HHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 30 WTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
...++.+++ +.|.++++.|...++......+ +.+.|+++||+ +||+.+..+..+..++..... + ..
T Consensus 220 ~~~lp~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~l~~~~~~~~~~~~~~~--~----~~- 286 (381)
T PRK03633 220 YGLMPLYLN-HQGMSDASIGFWMALLVSAGILGQWPIGRLADRF-----GRLLVLRVQVFVVILGSIAML--S----QA- 286 (381)
T ss_pred HHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-----CcHHHHHHHHHHHHHHHHHHh--h----hH-
Confidence 344566665 4799999999887777666655 78899999995 566777666666555544332 1 11
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
.....+++.+++.....+..++.+.|..+ +++++...+......++|..+||.++|++.|+.+|++.|.+.+.+.++
T Consensus 287 ~~~~~~~l~g~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 287 AMAPALFILGAAGFTLYPVAMAWACEKVE---HHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 22334455565555556667777777663 466777788888889999999999999999999999999988766654
Q ss_pred HHHHhh
Q 011112 189 QLLSCG 194 (493)
Q Consensus 189 ~~i~~~ 194 (493)
..+..+
T Consensus 364 ~~~~~~ 369 (381)
T PRK03633 364 YLLMLL 369 (381)
T ss_pred HHHHHH
Confidence 444333
No 147
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.09 E-value=3.5e-09 Score=105.35 Aligned_cols=178 Identities=19% Similarity=0.130 Sum_probs=134.2
Q ss_pred hhchhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.++.+.+|.+++.+++-.+ +.-+....|.|+.|+.|.|..+.++..+++=++-.. ..++|++|||+ ++.||.+.-+
T Consensus 248 VL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDkl--fkgrR~p~~~ 325 (448)
T COG2271 248 VLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKL--FKGRRGPMAL 325 (448)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh--cccccchHHH
Confidence 4678889989999987776 456667778899999999999999998888776666 46899999997 3446667777
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHH-HHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLG-SAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAF-GGICG 162 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~-G~~lg 162 (493)
+..++.+++.......++. ++....++.++.|+. ++.+ ...-....|.. |.+-.|.+.|+...+.++ |.+.+
T Consensus 326 i~~~~i~~~~~~~w~~~~~--~~~l~~~~l~~iGf~IyGPq-mLiGl~a~e~~---pK~AaGtA~Gf~Glf~Yl~Ga~~a 399 (448)
T COG2271 326 IFMLLITASLVLYWLAPNG--SYLLDAILLFIIGFLIYGPQ-MLIGLAAAEFV---PKKAAGTATGFVGLFAYLIGAALA 399 (448)
T ss_pred HHHHHHHHHHHHHHcCCCc--cHHHHHHHHHHHHHHHhhHH-HHHHHHHhccc---cHhhccchhchhhhHHHHhhHHhc
Confidence 7777777777766666643 455666666666654 3333 33444455776 458899999999999998 88899
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 011112 163 SLLGGYALTNIEIDRIFLLFTVLPAIQLLS 192 (493)
Q Consensus 163 ~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~ 192 (493)
....|++.|.+||...|.+..+..++..+.
T Consensus 400 ~~~~g~i~d~~gW~g~Fi~~~~~a~l~~ll 429 (448)
T COG2271 400 GLPLGYIADTWGWDGGFIVLSIAALLAILL 429 (448)
T ss_pred CCcceeeEecCCCcchHHHHHHHHHHHHHH
Confidence 999999999999999998877655555443
No 148
>PRK09952 shikimate transporter; Provisional
Probab=99.08 E-value=1.1e-08 Score=106.58 Aligned_cols=165 Identities=13% Similarity=0.114 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhh
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSS 106 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~ 106 (493)
......++++++++|.+.++......+......+ .+++|+++||+ +||+.++.+.++.+++...+.......+.
T Consensus 268 ~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T PRK09952 268 IVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-----GRRRVYITGALIGTLSAFPFFMALEAQSI 342 (438)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 4445667788888999887654433333333333 68899999995 45666666665554443333221101112
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHH-HHHHHHHHHHHHHHhhccc--cHHHHHHHHH
Q 011112 107 TWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLA-MAFGGICGSLLGGYALTNI--EIDRIFLLFT 183 (493)
Q Consensus 107 ~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~-~~~G~~lg~~i~g~l~~~~--gw~~~f~~~~ 183 (493)
.+.+++..++.+++.+...+...+++.|..+ .+.|+...++.+.. ..+|+.++|.+.+++.+.. +|+..+...+
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p---~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~ 419 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFG---ASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLL 419 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---cchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 3333444555567766666777888999884 47888888885544 4588999999999998743 4888888777
Q ss_pred HHHHHHHHHhhcccccc
Q 011112 184 VLPAIQLLSCGLVKENR 200 (493)
Q Consensus 184 ~~~~l~~i~~~~~~e~~ 200 (493)
++.++..+..+.+||++
T Consensus 420 ~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 420 AGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHccccc
Confidence 66666655556667654
No 149
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.08 E-value=6.1e-09 Score=110.11 Aligned_cols=149 Identities=15% Similarity=0.138 Sum_probs=102.7
Q ss_pred HHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 30 WTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
...+++++++++|.+..+.+...+...++..+ .++.|+++||+ +||+.++.+..+..+..+.....++ ...+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 367 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-----GTRKAYVCSLLISQLLIIPVFAIGG--ANVW 367 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHhhccc--cHHH
Confidence 34567788778999999999998888877766 68899999995 4555666665554444433332221 1223
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
...+..++.++......+...+++.|.. |+++||+++|+.+....+|..+||.++|++.++.||+..+...+....+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 368 VLGLLLFFQQMLGQGISGLLPKLIGGYF---DTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHhhC---CHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 3333333333222223344556777777 4589999999999999999999999999999999999887665544333
No 150
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.08 E-value=1e-08 Score=112.35 Aligned_cols=133 Identities=18% Similarity=0.045 Sum_probs=102.1
Q ss_pred HhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 011112 56 FFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAE 134 (493)
Q Consensus 56 ~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~ 134 (493)
.+.... .++.|+++||+ +||+.++.+.++.+++.+++++.++ ...+++.+++.+++.+...+...++++|
T Consensus 605 ~l~~i~G~il~g~L~Dr~-----GRr~~l~~~~~lsai~~ll~~~~~s----~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 605 TLAVLPGNIVSALLMDKI-----GRLRMLAGSMVLSCISCFFLSFGNS----ESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHHHcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445 57899999995 6788888888888888777776642 3345566667677666677778899999
Q ss_pred HhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhhccccccc
Q 011112 135 AAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVKENRV 201 (493)
Q Consensus 135 ~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~ 201 (493)
+.| .++|++++|+......+|.++||.+++.+.+. +...+|++.+++.++..++.+++||++.
T Consensus 676 l~P---t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 676 LYP---SDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred HcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 984 58899999999999999999999999988764 4567787777766665555666798764
No 151
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.08 E-value=6.6e-09 Score=106.77 Aligned_cols=152 Identities=15% Similarity=0.175 Sum_probs=106.9
Q ss_pred HHHHHHHHHhhhCCCHhh----HHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch
Q 011112 30 WTAVSYQLKDKLKFSPSA----SQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR 104 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~----~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~ 104 (493)
....+.+..+..+ +..+ .+...++..+...+ .+.+|+++||+ +||+.+..+.....++.+.....+
T Consensus 239 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~--- 309 (408)
T PRK09874 239 APILTLYVRELAG-NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-----GPEKILITALIFSVLLLIPMSFVQ--- 309 (408)
T ss_pred HHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---
Confidence 3444556555333 3333 23333344444444 68899999995 456666677666655555544443
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Q 011112 105 SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTV 184 (493)
Q Consensus 105 ~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~ 184 (493)
+.+.+.+.+++.+++.+...+...+++.+.. |+++||+.+++......+|..+||.++|.+.++.||++.|++.++
T Consensus 310 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~ 385 (408)
T PRK09874 310 -TPLQLGILRFLLGAADGALLPAVQTLLVYNS---SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAG 385 (408)
T ss_pred -cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC---CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHH
Confidence 3455667777888888887777777776665 458899999999999999999999999999999999999999887
Q ss_pred HHHHHHHHhh
Q 011112 185 LPAIQLLSCG 194 (493)
Q Consensus 185 ~~~l~~i~~~ 194 (493)
+.++..+..+
T Consensus 386 ~~l~~~~~~~ 395 (408)
T PRK09874 386 VVLFNAVYSW 395 (408)
T ss_pred HHHHHHHHHH
Confidence 7666555444
No 152
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.06 E-value=1.1e-08 Score=105.30 Aligned_cols=156 Identities=16% Similarity=0.063 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhh
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSS 106 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~ 106 (493)
......+.+++ +.|.+..+.+...+...+...+ ++++|+++||+ +||+.+..+.+...++.+.+...+ +
T Consensus 238 ~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~----~ 307 (406)
T PRK11551 238 FLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-----RPRRVVLLIYAGILASLAALAAAP----S 307 (406)
T ss_pred HHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHhcC----c
Confidence 33445566665 4899999999888887777666 78999999995 456666665555555544444443 2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cHHHHHHHHHHH
Q 011112 107 TWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-EIDRIFLLFTVL 185 (493)
Q Consensus 107 ~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-gw~~~f~~~~~~ 185 (493)
.+.+.+..++.+++.+...+...+++.|.. |+++|++..|+......+|..+||.++|++.++. +|+..++..+..
T Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~ 384 (406)
T PRK11551 308 FAGMLLAGFAAGLFVVGGQSVLYALAPLFY---PTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPV 384 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHc---chhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHH
Confidence 333444555566665555666777888887 4589999999999999999999999999998874 466666655544
Q ss_pred HHHHHHHhhcc
Q 011112 186 PAIQLLSCGLV 196 (493)
Q Consensus 186 ~~l~~i~~~~~ 196 (493)
.++..+..+++
T Consensus 385 ~~~~~~~~~~~ 395 (406)
T PRK11551 385 ILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHHH
Confidence 44433333333
No 153
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.04 E-value=3.5e-09 Score=107.81 Aligned_cols=191 Identities=16% Similarity=0.226 Sum_probs=126.9
Q ss_pred HHHHHHHhhcccchHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHH
Q 011112 280 AIYSLYSAFRQPEILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRI 359 (493)
Q Consensus 280 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~ 359 (493)
.+.+.+.+++++....++.+.+++....... ....+|-.++.|-.+.-.|...+....+.++.-++..++.+|+|.-++
T Consensus 360 v~a~~~~~~~s~~~llff~~av~mG~g~~lv-~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v 438 (618)
T KOG3762|consen 360 VLADVGKVFASPHILLFFFVAVVMGAGVGLV-FTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNV 438 (618)
T ss_pred HHHHHHHHhcCCCEEehhHHHHHHHHHHHHH-HHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccce
Confidence 3445667788887655433333222211111 112244445567666677877788888999988889999999999888
Q ss_pred HHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHh-hh
Q 011112 360 LLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISN-FG 438 (493)
Q Consensus 360 l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~-lg 438 (493)
+..+..+...= ++. ... ..+.|.++.+-.+..++....+...-+|++..+||+.++++++++..... +|
T Consensus 439 ~~lgLa~~~~R-f~~--~S~-------L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG 508 (618)
T KOG3762|consen 439 MYLGLACNVGR-FLY--YSY-------LQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLG 508 (618)
T ss_pred eeehhhHHHHH-HHH--HHH-------hcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccC
Confidence 88776665543 111 111 23456666666777777777777777899999999999999999988554 89
Q ss_pred hhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh-hcccC
Q 011112 439 STVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL-FLIPK 486 (493)
Q Consensus 439 ~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 486 (493)
.++|+++||.+.+++|-.. .+..+.+..++.++..+.+ +.++|
T Consensus 509 ~g~GslIGG~~v~~fg~~t-----tf~~~giAcl~~l~~~~~iq~~l~~ 552 (618)
T KOG3762|consen 509 KGLGSLIGGFVVERFGART-----TFRIFGIACLVTLALFISIQLLLKR 552 (618)
T ss_pred cchhhhhhhhhheeehhHH-----HHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 9999999999999887543 2334455555555544444 34443
No 154
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.02 E-value=5.4e-07 Score=88.74 Aligned_cols=178 Identities=16% Similarity=0.113 Sum_probs=101.3
Q ss_pred hchhHHHHHHHHHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHh-hhhhhhhcccccccCCCCchhHHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWS-IKPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~-~~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+|++++. .|.+.-.....+.|-...+-+++|.+..|++.+...-+.... ++++.|.++||+ +||+.-+.-
T Consensus 35 Fqr~yl~----vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-----Grk~~cl~~ 105 (354)
T PF05631_consen 35 FQRKYLL----VYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-----GRKKACLLF 105 (354)
T ss_pred HHHHHHH----HHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CchHHHHHH
Confidence 4444444 444433333333333333335699999999887665555444 489999999995 566666666
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHH-HHhhh-hchhcchhHHHHHH-HHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIA-EAAKS-ERAAFAGDLQSLSW-LAMAFGGICGS 163 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~-~~~~~-~~~~~rg~~~g~~~-~~~~~G~~lg~ 163 (493)
+++..++++..- . ++++.+++.|++.|++.+.-..+-.+... |.-++ .|.+..+...+... ....+-.++..
T Consensus 106 cily~~scl~k~-~----~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aG 180 (354)
T PF05631_consen 106 CILYSLSCLTKH-S----SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAG 180 (354)
T ss_pred HHHHHHHHHHHh-c----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHh
Confidence 677777765422 2 35788999999999999988777766643 32211 12222222222221 11122234444
Q ss_pred HHHHHhhcccc--HHHHHHHHHHHHHHHHHHhh-ccccc
Q 011112 164 LLGGYALTNIE--IDRIFLLFTVLPAIQLLSCG-LVKEN 199 (493)
Q Consensus 164 ~i~g~l~~~~g--w~~~f~~~~~~~~l~~i~~~-~~~e~ 199 (493)
+++-++.++.+ -..+|....++.++..+... .-+|+
T Consensus 181 v~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 181 VVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 55555555544 36788876655444444333 23444
No 155
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.01 E-value=1.1e-08 Score=106.53 Aligned_cols=183 Identities=13% Similarity=0.090 Sum_probs=107.5
Q ss_pred chhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+..+.+....++.... .......+.+++++.|.|+.+.++..++......+ ++++|+++||++ .+||... +
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~---~~~~~~~--~ 323 (438)
T TIGR00712 249 PNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF---KGNRGAT--G 323 (438)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcccHH--H
Confidence 334444343333333322 23345667888887899999999887777766665 789999999962 2233222 2
Q ss_pred HHHH---HHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHH-HHHH
Q 011112 87 TVLS---LVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFG-GICG 162 (493)
Q Consensus 87 ~~l~---~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G-~~lg 162 (493)
.... .++.+.+...+. .+.+......+..+++.............|.. |+++||++.|+.+....+| ..+|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~gg~~~g 398 (438)
T TIGR00712 324 VFFMTLVTIAVIVYWMNPA--GNPLVDMICMIVIGFLIYGPVMLIGLHALELA---PKKAAGTAAGFTGLFGYLGGSVAA 398 (438)
T ss_pred HHHHHHHHHHHHHHHhcCC--CchHHHHHHHHHHHHHHccHHHHHHHHHHHhc---ChhheeeehhhhchHHHhhhhhhc
Confidence 2111 112221122111 11222222333333332111111223455665 4589999999998888876 4689
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHHHH-hhccccccc
Q 011112 163 SLLGGYALTNIEIDRIFLLFTVLPAIQLLS-CGLVKENRV 201 (493)
Q Consensus 163 ~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~-~~~~~e~~~ 201 (493)
|.+.|.+.++.||++.|++.+++.++..+. .+++||++|
T Consensus 399 p~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 399 SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred chhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999998877665555543 355777764
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.00 E-value=5.6e-09 Score=108.90 Aligned_cols=158 Identities=16% Similarity=0.111 Sum_probs=106.3
Q ss_pred HHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhh---cccch----hh
Q 011112 35 YQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGL---NAFFR----SS 106 (493)
Q Consensus 35 ~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~---~~~~~----~~ 106 (493)
+++.+++|.+..+.+.......+...+ .++.|+++||+ +||+.+..+.++..++.+.+.. ..... ..
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-----GRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 344556899998777776666665555 78899999995 4666666776666666555542 11110 01
Q ss_pred HHHHHHHHHH-HHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Q 011112 107 TWHLIVLLTA-QNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVL 185 (493)
Q Consensus 107 ~~~l~~~~~l-~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~ 185 (493)
...+....+. .+++.+. .+...+++.|.. |+++|++++++......+|..+++.+.+++.++.+|++.|++.+++
T Consensus 383 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~ 458 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGW-GPVPWVIVSEIF---PLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGL 458 (481)
T ss_pred HHHHHHHHHHHHHHHccc-cCeehhhhhccC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHH
Confidence 2122222222 2223222 244556667877 4588999999999999999999999999999999999999988877
Q ss_pred HHHHHHHh-hccccccc
Q 011112 186 PAIQLLSC-GLVKENRV 201 (493)
Q Consensus 186 ~~l~~i~~-~~~~e~~~ 201 (493)
.++..+.. ++.||+++
T Consensus 459 ~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 459 NVLGLIFVYFFLPETKG 475 (481)
T ss_pred HHHHHHHHheecccCCC
Confidence 77666554 44676553
No 157
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.99 E-value=8.3e-09 Score=102.75 Aligned_cols=181 Identities=22% Similarity=0.225 Sum_probs=126.0
Q ss_pred hhhhhhchhHHHHHHHHHHH-Hh-HHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCc
Q 011112 3 QLKNVFGVSFLWLICLIYFT-QG-FRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKR 79 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~f~-~g-~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~r 79 (493)
|++..++.+..|.+.+.|+. .| +.++ ...++.|+++++|.++.+.|...+.+.+.-++ +|++|+++||+ +.
T Consensus 210 ~~~~v~~~~~~W~lsllY~~tFG~Fvgf-s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-----Gg 283 (417)
T COG2223 210 QLKAVFSNKDTWLLSLLYFATFGGFVGF-SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-----GG 283 (417)
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-----cc
Confidence 45667888999989999966 23 4443 34567788999999999999888887766665 99999999997 33
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccch---hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHH
Q 011112 80 IPYLVISTVLSLVPWLILGLNAFFR---SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMA 156 (493)
Q Consensus 80 r~~ii~~~~l~~~~~~~~~~~~~~~---~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~ 156 (493)
+|.+.......+++....+..++.. .+....++..+...+..+...-....+++.+.+ ++.|.+.|+......
T Consensus 284 ~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~----~~~G~v~G~vga~G~ 359 (417)
T COG2223 284 RRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP----KETGAVTGIVGAIGG 359 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH----hhhhHHHHHHHHhcc
Confidence 4455555555666666666554211 122233332333333333333344577777774 688999999999999
Q ss_pred HHHHHHHHHHHHhhcccc-HHHHHHHHHHHHHHHHHHh
Q 011112 157 FGGICGSLLGGYALTNIE-IDRIFLLFTVLPAIQLLSC 193 (493)
Q Consensus 157 ~G~~lg~~i~g~l~~~~g-w~~~f~~~~~~~~l~~i~~ 193 (493)
+|+..-|..-|...+..| ++..|++...+.++..+..
T Consensus 360 lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 360 LGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred ccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 999888889898888777 8999998887766666543
No 158
>PRK12382 putative transporter; Provisional
Probab=98.99 E-value=3.1e-08 Score=101.49 Aligned_cols=150 Identities=13% Similarity=0.152 Sum_probs=108.0
Q ss_pred HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 29 VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
.....++++++ .|.+. .+...+.+.+...+ ++++|++.||+ +||+.+..+..+..++.+.+...+ +.
T Consensus 235 ~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-----g~~~~~~~~~~~~~~~~~~~~~~~----~~ 302 (392)
T PRK12382 235 IGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-----GGVKVAIVSLLVETVGLLLLWLAP----TA 302 (392)
T ss_pred HHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeehHHHHHHHHHHHHHHHHcc----cH
Confidence 33444566554 56654 34444445555444 78999999995 455666677777667666655543 33
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPA 187 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~ 187 (493)
+...+..++.+++.+...+...+.+.|.. |+++||++.|+.+....+|..+|+.+.|++.++.||++.|.+.+++.+
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~ 379 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRV---PSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAV 379 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 45556777788887777666666767766 468999999999999999999999999999999999999998887665
Q ss_pred HHHHHh
Q 011112 188 IQLLSC 193 (493)
Q Consensus 188 l~~i~~ 193 (493)
+..+..
T Consensus 380 ~~~~~~ 385 (392)
T PRK12382 380 LGIIVT 385 (392)
T ss_pred HHHHHH
Confidence 555443
No 159
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.96 E-value=6.7e-08 Score=99.50 Aligned_cols=173 Identities=9% Similarity=-0.083 Sum_probs=112.8
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.+.++......++..+.. ......+.++++++|.++.+.+........+..+ .+++|+++||+ +||+.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-----~~~~~~~~ 286 (406)
T PRK15402 212 LKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-----PLRSLIRM 286 (406)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CHHHHHHH
Confidence 44455554444444433322 2223345666778999999988776555555555 68899999985 56667777
Q ss_pred HHHHHHHHHHHHhhccc-chhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAF-FRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
+.++..++...+...+. ...+.+.+++...+.+++.+...+......... ++++||++.+..+....+|..+|+.
T Consensus 287 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~g~~ 362 (406)
T PRK15402 287 GLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS----SDVSKGTVSAAMGMLSMLIFTVGIE 362 (406)
T ss_pred HHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh----ccccccHHHHHHHHHHHHHHHHHHH
Confidence 76666666555544321 112344455666677787777665555544322 2388999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHH
Q 011112 165 LGGYALTNIEIDRIFLLFTVLPAIQ 189 (493)
Q Consensus 165 i~g~l~~~~gw~~~f~~~~~~~~l~ 189 (493)
+++.+.+..++....+..++..++.
T Consensus 363 ~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 363 LSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHhcccCCchHHHHHHHHHHHHHH
Confidence 9999999888776555544443333
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.96 E-value=3.2e-08 Score=99.47 Aligned_cols=156 Identities=15% Similarity=0.146 Sum_probs=113.0
Q ss_pred hchhHHHHHHHHHHHHhHH-H-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 8 FGVSFLWLICLIYFTQGFR-S-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~-~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.+.+.++......++.... . ......+.+.++.+|.+..+.+...+...++..+ .++.|+++||. +||+.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~ 281 (365)
T TIGR00900 207 LKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-----KRMALMT 281 (365)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----chhHHHH
Confidence 3444555444444443332 2 2224455566656899999999888877776665 78899999984 5666666
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
.+..+..++.....+.++ +.+...+..++.+++.+...+...+++.|.. |+++|+++.|+......+|..+|+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~g~~ 355 (365)
T TIGR00900 282 GAIFVIGLAILVVGLTPP---NFPLFLVLWFAIGVGYGPINVPQGTLLQRRV---PAELLGRVFGAQFSLSHAAWPLGLI 355 (365)
T ss_pred HHHHHHHHHHHHHHhhch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666665555432 2455667777888988888888889988888 4589999999999999999999999
Q ss_pred HHHHhhcccc
Q 011112 165 LGGYALTNIE 174 (493)
Q Consensus 165 i~g~l~~~~g 174 (493)
++|++.|+.|
T Consensus 356 ~~g~l~~~~g 365 (365)
T TIGR00900 356 LAGPLADHLG 365 (365)
T ss_pred HHHHHHHHcC
Confidence 9999988654
No 161
>PRK10504 putative transporter; Provisional
Probab=98.96 E-value=7.6e-08 Score=101.15 Aligned_cols=159 Identities=16% Similarity=0.043 Sum_probs=109.9
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+.+.......++..+.. ......+.|++..+|.++.+.++......+.... .+++|+++||+ +||+.++.+
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-----g~~~~~~~~ 333 (471)
T PRK10504 259 RTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-----GYRRVLVAT 333 (471)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CchHHHHHH
Confidence 3344444444445544432 3344455666767899999999877666665554 68999999995 566777777
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
.....+..+++...+.. .+.+...+..++.+++.+...+..+.++.+.. |++++|...|+......+|..+|+.++
T Consensus 334 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 334 TLGLALVSLLFMLVALL-GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDL---PDNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred HHHHHHHHHHHHhcccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 77666665555544321 12333344555667777777777788887776 458999999999999999999999999
Q ss_pred HHhhccccHH
Q 011112 167 GYALTNIEID 176 (493)
Q Consensus 167 g~l~~~~gw~ 176 (493)
|.+.+..++.
T Consensus 410 g~ll~~~g~~ 419 (471)
T PRK10504 410 GLLLGLFGQQ 419 (471)
T ss_pred HHHHHHhhhh
Confidence 9998776653
No 162
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.96 E-value=1.4e-07 Score=99.83 Aligned_cols=152 Identities=17% Similarity=0.201 Sum_probs=117.4
Q ss_pred HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 29 VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
...-+|.+.++++|.+....|.+.+.+.++..+ ..+.+.+.+|. ++++++..+.+.+.++.+.+++.+ +.
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-----~~~~lv~~~~~~~a~~~~~lal~~----~~ 307 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-----SSRRLVLLASLLFALALLLLALSP----SF 307 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CcchhhHHHHHHHHHHHHHHhcch----HH
Confidence 334455566778999999999999999999887 45677777764 455677778878888877777765 45
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPA 187 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~ 187 (493)
+...+..++.|++.....+..++.+-+.+ |++.|||+++++......+..+|..+.|.+.++.|.+..+.+.++..+
T Consensus 308 ~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~---P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~ll 384 (524)
T PF05977_consen 308 WLALIALFLAGAAWIIANSSLNTLVQLSV---PDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALL 384 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 56667777788887777766666655555 569999999999999999999999999999999999999887775544
Q ss_pred HHHHH
Q 011112 188 IQLLS 192 (493)
Q Consensus 188 l~~i~ 192 (493)
+..+.
T Consensus 385 l~~~~ 389 (524)
T PF05977_consen 385 LSALI 389 (524)
T ss_pred HHHHH
Confidence 44433
No 163
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.95 E-value=1.6e-08 Score=102.22 Aligned_cols=163 Identities=20% Similarity=0.170 Sum_probs=103.3
Q ss_pred chhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH-
Q 011112 9 GVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI- 85 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~- 85 (493)
+.+.++.+.+.++..... .......+.++++++|.+..+.+...+...+...+ .++.|+++||.. .+||..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~---~~~~~~~~~~ 290 (379)
T TIGR00881 214 LNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLF---NGRRGPLAVF 290 (379)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHc---CCcchHHHHH
Confidence 344555455555554443 24455667788888999999999888877776666 688999999741 223322222
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
......++.......+. .+.....+..++.++......+....++.|.. |+++||++.|+.+....+|..+++.+
T Consensus 291 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~g~~~~~~~ 365 (379)
T TIGR00881 291 FMALIIVSLLVYWLNPA--ANPLMDLICLFALGFLVYGPQMLIGVIASELA---PKKAAGTAAGFVGFFAYLGGILAGLP 365 (379)
T ss_pred HHHHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc---CcchhHHHHHHHHHhhhhhhhhhhhh
Confidence 22222222222222111 12223334444445443333344456677776 45899999999999999999999999
Q ss_pred HHHhhccccHHHHH
Q 011112 166 GGYALTNIEIDRIF 179 (493)
Q Consensus 166 ~g~l~~~~gw~~~f 179 (493)
.|.+.++.||++.|
T Consensus 366 ~g~l~~~~g~~~~f 379 (379)
T TIGR00881 366 LGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHhhcccccC
Confidence 99999999998764
No 164
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.95 E-value=6.2e-08 Score=99.71 Aligned_cols=149 Identities=16% Similarity=0.155 Sum_probs=93.7
Q ss_pred HHHHHhhhCCCHhhHHHHHHHHHh-hHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHH---hhcccchhhHH
Q 011112 34 SYQLKDKLKFSPSASQFVSAVAFF-PWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLIL---GLNAFFRSSTW 108 (493)
Q Consensus 34 ~~~l~~~~g~s~~~~g~~~s~~~l-~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~---~~~~~~~~~~~ 108 (493)
++++.+++|.++++++...+.... ...+ .+++|+++||+ +||+.+..+.....+..+.+ +..+ ++.+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-----g~~~~l~~~~~~~~l~~l~~~~~~~~~---~~~~ 304 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-----GLYRSLMLFGVLQAVSNLGYWVLAVTP---KHLW 304 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHhcC---CcHH
Confidence 456677799999999987655433 3444 68899999995 45555555544444433322 2332 1333
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
.+.+..+++.+..+.......+....+.++ +..++..++.....++|..+++.++|.+.++.||+..|.+.+++.++
T Consensus 305 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~ 381 (402)
T PRK11902 305 TMALAIGIENLCGGMGTAAFVALLMALCNR---SFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALP 381 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 444444444444444444445555555543 22344566666677788887778999999999999999988877666
Q ss_pred HHHHh
Q 011112 189 QLLSC 193 (493)
Q Consensus 189 ~~i~~ 193 (493)
..+..
T Consensus 382 ~~~~~ 386 (402)
T PRK11902 382 GLALL 386 (402)
T ss_pred HHHHH
Confidence 54443
No 165
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.95 E-value=2e-06 Score=88.34 Aligned_cols=381 Identities=18% Similarity=0.165 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHh-hHhhhhhhhhcccccccCCCCchhHHHHHH--
Q 011112 12 FLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFF-PWSIKPLYGILSDCIPIKGRKRIPYLVIST-- 87 (493)
Q Consensus 12 ~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l-~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~-- 87 (493)
..+.+...+|+....+ +...+++.++.+-+.-+.--.+.+--...+ ...++|..|...||.+ |.+.+..+.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~-----Rl~~~~~~l~~ 77 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSP-----RLKVIRTSLVV 77 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCc-----chhhHHHHHHH
Confidence 3444566677777654 666677777776544333322211111112 2335899999999953 443433322
Q ss_pred --HHHHHHHHHHh--hcccch--hhHHHHHHHHHHHHhhhhhHHHHHHHH--H--HHHh---hhhchhcchhHHHHHHHH
Q 011112 88 --VLSLVPWLILG--LNAFFR--SSTWHLIVLLTAQNLGSAMADVVVDAM--I--AEAA---KSERAAFAGDLQSLSWLA 154 (493)
Q Consensus 88 --~l~~~~~~~~~--~~~~~~--~~~~~l~~~~~l~~~~~~~~~~~~~al--i--~~~~---~~~~~~~rg~~~g~~~~~ 154 (493)
+..++++.++. +....+ .+.+....+..+..+.++.......+. . .|.. .+.+++.+.+.++...-.
T Consensus 78 Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRI 157 (432)
T PF06963_consen 78 QNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRI 157 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHH
Confidence 22222222221 111111 011222333333222222222221111 1 1211 122567788888888888
Q ss_pred HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHh-hc---c-ccccccchhhhcccccCCCcccCCCCcccCCC-
Q 011112 155 MAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSC-GL---V-KENRVSTKVLKEFSSSNGYHQVNGNESILDDE- 228 (493)
Q Consensus 155 ~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~---~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 228 (493)
--+--+++|++.|.+.++.+.+....+.++..++....- ++ + +..| ....+++ .++.+.+..++
T Consensus 158 DL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P-~L~~~~~---------~~~~~~~~~~~~ 227 (432)
T PF06963_consen 158 DLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVP-ALAVKKR---------SSESESSSDEES 227 (432)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-HhcCCCC---------Cccccccccccc
Confidence 888899999999999998898887777777766665421 11 1 1111 1100000 00000000000
Q ss_pred CCccccchhhhhhhhhhhhhhhhhhhhhhhhccCCCCCCchhHHHHhhHHHHHHHHHHhhcccchHHHHHHHHHHHhccc
Q 011112 229 DGFSEEKYNISTKKRKKNKKNQKKRMFKIRKSQIPEKNNPLVIQWFHSLKAAIYSLYSAFRQPEILRPMAWFFLAHVAVP 308 (493)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 308 (493)
... ++ . .+ . ......+..++..+.....+++|.+...+.+.+++....
T Consensus 228 ~~~--~~------~-~~-------~---------------~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TVL- 275 (432)
T PF06963_consen 228 SSE--SS------S-DP-------S---------------ILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTVL- 275 (432)
T ss_pred ccc--cc------c-hh-------h---------------HHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHHh-
Confidence 000 00 0 00 0 000011122333334455677887665554444422222
Q ss_pred CCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCcc
Q 011112 309 NLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGIS 388 (493)
Q Consensus 309 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~ 388 (493)
++...+..|+.. .|+|+..+|.....+.+..+.|+..+.++.+|+|..|.=.++.........+ .....+. .+.+
T Consensus 276 sf~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~--~v~~~~~--~~~~ 350 (432)
T PF06963_consen 276 SFGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL--CVVSFWA--PGSP 350 (432)
T ss_pred cCcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH--HHHHHhc--CCCC
Confidence 234445556555 4999999999999999999999999999999999888777776655543211 1111111 0111
Q ss_pred -Cce--EeeehhHHHHHHHHhhHh-HHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHh
Q 011112 389 -DKT--MVLYGSALVDAVNQFKFM-PFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSF 444 (493)
Q Consensus 389 -~~~--~~l~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~ 444 (493)
... ..+..+....-++-+.+= ....+++|..|+++||+..|.-++.+++-..+.-.
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 111 111111111112211111 12346888999999999999999999887655433
No 166
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.94 E-value=2.2e-08 Score=102.33 Aligned_cols=142 Identities=13% Similarity=0.075 Sum_probs=100.6
Q ss_pred HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 29 VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
.....++++++++|.+..+.+...+...++..+ .++.|+++||+ +||+.+..+.....+........+ .+.
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~---~~~ 328 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-----GRRKAYVCSLLAGQLLIIPVFAIG---ANV 328 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchhhhHHHHHHHHHHHHHHHHhC---Cch
Confidence 334557788888999999999988887777766 78999999995 455566666554423222222222 123
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc-HHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE-IDRIFLL 181 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g-w~~~f~~ 181 (493)
+.+.+..++.+++.+...+...+++.|.. |+++|++++|+.+....+|..+||.++|++.++.| |+..+..
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 329 AVLGLGLFFQQMLVQGIWGILPKHLGEYF---PTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHccchhhHHHHHhhhC---CcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 34444444445544444456667888877 45899999999999999999999999999999988 8877654
No 167
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.94 E-value=1.3e-08 Score=107.31 Aligned_cols=181 Identities=17% Similarity=0.062 Sum_probs=103.3
Q ss_pred hchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCC-C-chhHH
Q 011112 8 FGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGR-K-RIPYL 83 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~-~-rr~~i 83 (493)
++.+..|.+...+++.... ......++.++.+++|.+..+.+.+.++..+...+ ++++|+++||+..|.. | |+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~ 328 (476)
T PLN00028 249 VTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWAL 328 (476)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHH
Confidence 3334445455555543332 23344567787888999999999888887776665 7899999999742211 1 22232
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS 163 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~ 163 (493)
....++..+........+ +.+..++..++.+++.+.......+++.++. +++||.+.|+.....++|+.+++
T Consensus 329 ~~~~~l~~i~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~g~lg~~i~~ 400 (476)
T PLN00028 329 WIVQTLGGVFCIWLGRAN----SLGAAIVVMILFSIFVQAACGATFGIVPFVS----RRSLGVISGLTGAGGNVGAVLTQ 400 (476)
T ss_pred HHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHHHhhhhhcccCcccC----hhhchhhhhhhhccccHHHHHHH
Confidence 233333222222222222 2223333333444444333333444444443 47899999998776666666665
Q ss_pred HHHHHhhccccHHHHHHHHHHHHHHHHHHhhccc
Q 011112 164 LLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVK 197 (493)
Q Consensus 164 ~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~ 197 (493)
.+-+ ..+..+|+..|++.+++.++..++.++++
T Consensus 401 ~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 401 LLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 5543 22345699999998877666666555554
No 168
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.94 E-value=7.1e-08 Score=100.34 Aligned_cols=183 Identities=15% Similarity=0.087 Sum_probs=100.7
Q ss_pred hhchhHHHHHHHHHHHH-hHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHH
Q 011112 7 VFGVSFLWLICLIYFTQ-GFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~-g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~i 83 (493)
.++.+..+.+...++.. ... +.....++.++++++|.+..+.+...++..+...+ +++.|+++||+ +||+.+
T Consensus 238 l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-----grr~~~ 312 (432)
T PRK10406 238 LWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-----GRRTSM 312 (432)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CchHHH
Confidence 34444445444444332 332 23445677888888999998888777665555444 78899999996 344454
Q ss_pred HHHHHHHHHHHHHHh-hcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHH-HHHH
Q 011112 84 VISTVLSLVPWLILG-LNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAF-GGIC 161 (493)
Q Consensus 84 i~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~-G~~l 161 (493)
+.+..+..+...... ..... .+....+....+..++.+.......++..|.+ |++.|+.+.|+.+...+. ....
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~f---p~~~r~t~~g~~~~~g~~~~g~~ 388 (432)
T PRK10406 313 LCFGSLAALFTVPILSALQNV-SSPYAAFGLVMCALLIVSFYTSISGILKAEMF---PAQVRALGVGLSYAVANALFGGS 388 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCccchhhhHHHHHHHHHHHhH
Confidence 444433322222111 11111 11122222222233333333344567778888 458999999998876554 2334
Q ss_pred HHHHHHHhhccccHHHHHHHHHHHHHHHHHHhhcccc
Q 011112 162 GSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVKE 198 (493)
Q Consensus 162 g~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e 198 (493)
.|.+.+.+.+...|...++..++..++..+..+++++
T Consensus 389 ~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 389 AEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 7777776643323666666555555554444444443
No 169
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.92 E-value=9.5e-08 Score=96.00 Aligned_cols=176 Identities=20% Similarity=0.099 Sum_probs=125.0
Q ss_pred hhhchhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHH
Q 011112 6 NVFGVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~i 83 (493)
+.++++.++......++..- ....+..+.|++++..|.|.+++++..-.+.++..+ +.+.|.++|| +.|+.+
T Consensus 206 ~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr------~~~~~l 279 (394)
T COG2814 206 RLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR------GPRRAL 279 (394)
T ss_pred HHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc------cchhHH
Confidence 34666666644444333211 224567778999999999999999988888887777 6899999997 355566
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGS 163 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~ 163 (493)
+....+.++..+.+.+.++ +.+..++..++.++.... ..+.+..+..+. -++.++.+.++.....++|..+|.
T Consensus 280 ~~~~~l~a~~~l~l~~~~~---~~~~~~~~~~~wg~a~~~---~~~~~~~~~a~~-~p~~~~~a~sl~~aa~nlgia~GA 352 (394)
T COG2814 280 IAALLLLALALLALTFTGA---SPALALALLFLWGFAFSP---ALQGLQTRLARL-APDAADLAGSLNVAAFNLGIALGA 352 (394)
T ss_pred HHHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHhhh---hhhHHHHHhccc-CCCchHHHHHHHHHHHHHHHHHHH
Confidence 6666666666666555542 334444555554444333 455666666652 358899999999999999999999
Q ss_pred HHHHHhhccccHHHHHHHHHHHHHHHHHHhh
Q 011112 164 LLGGYALTNIEIDRIFLLFTVLPAIQLLSCG 194 (493)
Q Consensus 164 ~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~ 194 (493)
.+||.+.+++|++...+..+++.++..+..+
T Consensus 353 ~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 353 ALGGLVLDALGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877666665544
No 170
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.91 E-value=8.7e-08 Score=98.16 Aligned_cols=174 Identities=13% Similarity=0.041 Sum_probs=110.1
Q ss_pred hchhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHh-hHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 8 FGVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLKFSPSASQFVSAVAFF-PWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l-~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
++.+..+......++... ........+++++| .|.+++++|...+.... ...+ ..+.|+++||+ ++|+.+.
T Consensus 205 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-----g~~~~l~ 278 (390)
T TIGR02718 205 FRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-----GLWRTFI 278 (390)
T ss_pred HcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-----hHHHHHH
Confidence 333334433334444333 23334455677765 89999999997776543 3445 56899999995 5666666
Q ss_pred HHHHHHHHHHHH-Hhhccc-chhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLI-LGLNAF-FRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 85 ~~~~l~~~~~~~-~~~~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
.+..+..+..+. ...... .............+.+++.+...+...+.+.+..+ +++++|+.+++.+...++|..+|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~lg~~~g 356 (390)
T TIGR02718 279 LGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAG--DGDQAGTDVTAVQSTRDLGELIA 356 (390)
T ss_pred HHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cccchHHHHHHHHHHHHHHHHHH
Confidence 665544222221 111110 00122223334445566666666666777666653 23788999999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHH
Q 011112 163 SLLGGYALTNIEIDRIFLLFTVLPAIQ 189 (493)
Q Consensus 163 ~~i~g~l~~~~gw~~~f~~~~~~~~l~ 189 (493)
+.++|++.++.||+..|++.+++.++.
T Consensus 357 ~~~~G~l~~~~G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 357 SSIAGYLTDRFGYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 999999999999999998877655443
No 171
>PRK10054 putative transporter; Provisional
Probab=98.91 E-value=9e-09 Score=105.79 Aligned_cols=134 Identities=19% Similarity=0.195 Sum_probs=93.7
Q ss_pred CcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCc
Q 011112 311 STVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDK 390 (493)
Q Consensus 311 ~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~ 390 (493)
.+.++.|+++++|+|..+.|+......++.+++.++.|++.||+++|+.+..+.++..++.+. ..+. ++.
T Consensus 27 ~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~-~~~~---------~~~ 96 (395)
T PRK10054 27 LPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA-IPLV---------NNV 96 (395)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH-HHHH---------hHH
Confidence 334456677779999999999988888888889999999999999999988887766554322 1111 111
Q ss_pred eEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 391 TMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
+.++....+.............++..+..|+++|++++|+.+...++|..++|.+++.+.+ +|+
T Consensus 97 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~ 160 (395)
T PRK10054 97 TLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSI 160 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 1111111111111111122235677889999999999999999999999999999998875 443
No 172
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.89 E-value=2.1e-07 Score=95.56 Aligned_cols=171 Identities=16% Similarity=0.120 Sum_probs=109.9
Q ss_pred hhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.++++.++.....++...... ......+|++.+++|.+..+.+...+...++..+ +.+.|.+.||. +|+ .++
T Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-----~~~-~l~ 285 (394)
T PRK10213 212 LLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-----VKL-ALA 285 (394)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-----chh-HHH
Confidence 345555554433333332221 2234444555667899999999877777766665 67889999972 333 333
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
.+..+..++.+.+.... ++.+.+.+..++.+++.+...+..++.+.+..+ +++++..+......++|..+|+.
T Consensus 286 ~~~~~~~~~~~~l~~~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~lg~~~G~~ 358 (394)
T PRK10213 286 GAPLVLAVSALVLTLWG---SDKIVATGVAIIWGLTFALVPVGWSTWITRSLA----DQAEKAGSIQVAVIQLANTCGAA 358 (394)
T ss_pred HHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc----ccHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333322222222 134455566667788888888878877777663 45667777888888999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHH
Q 011112 165 LGGYALTNIEIDRIFLLFTVLPAIQL 190 (493)
Q Consensus 165 i~g~l~~~~gw~~~f~~~~~~~~l~~ 190 (493)
++|++.++.|++..+...+.+.++..
T Consensus 359 l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 359 IGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHhccChhhHHHHHHHHHHHHH
Confidence 99999999999998888775544443
No 173
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.89 E-value=1.7e-07 Score=95.72 Aligned_cols=166 Identities=14% Similarity=0.146 Sum_probs=112.5
Q ss_pred hhchhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.++.+..+.+....++... ........+++++ +.|.+.++.|...++..+.... .++.|++.||+ ++|+.+.
T Consensus 201 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----~~~~~l~ 274 (382)
T PRK11128 201 LLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-----SARDLLL 274 (382)
T ss_pred HHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CHHHHHH
Confidence 3455555544444444333 2333445566765 5899999999888766665554 67899999984 5667777
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHH-HHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSW-LAMAFGGICGS 163 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~-~~~~~G~~lg~ 163 (493)
.+.+...++.+.++..+ +.+..++..++.+++.+...+....+..+. +++++++.++... ....+|..+|+
T Consensus 275 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~ig~ 346 (382)
T PRK11128 275 LSAICGVVRWGLMGSTT----ALPWLIVIQILHCGTFTVCHLAAMRYIAAR----PGSEVIRLQALYSALAMGGSIAIMT 346 (382)
T ss_pred HHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 77777777766655543 455566777788888777666555554443 3466788899886 55678889999
Q ss_pred HHHHHhhccccHHHHHHHHHHHHH
Q 011112 164 LLGGYALTNIEIDRIFLLFTVLPA 187 (493)
Q Consensus 164 ~i~g~l~~~~gw~~~f~~~~~~~~ 187 (493)
.++|.+.|++|+. .++..+.+.+
T Consensus 347 ~i~G~l~~~~g~~-~~~~~~~~~~ 369 (382)
T PRK11128 347 VLSGFLYQHLGAG-VFWVMALVAL 369 (382)
T ss_pred HHHHHHHHhccHH-HHHHHHHHHH
Confidence 9999999999874 5665554433
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.88 E-value=5.9e-08 Score=100.76 Aligned_cols=159 Identities=19% Similarity=0.227 Sum_probs=108.0
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.+.++.+...+++..+.. ......+.+.+..+| +..+.+.+.++..++..+ .+++++++||+ +||+.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-----g~~~~~~~ 292 (437)
T TIGR00792 219 FKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-----GRKILFAG 292 (437)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHH
Confidence 45555554555555544432 222223344444455 556666666666666555 78999999995 56677777
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh----chhcchhHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE----RAAFAGDLQSLSWLAMAFGGIC 161 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~----~~~~rg~~~g~~~~~~~~G~~l 161 (493)
+..+.+++.+.+.+.+ ++.+...+..++.+++.+...+...+++.|..+.+ +++++|...|+.+....+|..+
T Consensus 293 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~l 369 (437)
T TIGR00792 293 GILLMVLGYLIFFFAG---SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQAL 369 (437)
T ss_pred HHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHH
Confidence 8777777766655543 13344556666778888888888899998887532 2466899999999999999999
Q ss_pred HHHHHHHhhccccH
Q 011112 162 GSLLGGYALTNIEI 175 (493)
Q Consensus 162 g~~i~g~l~~~~gw 175 (493)
|+.+.|++.+..||
T Consensus 370 g~~i~g~ll~~~G~ 383 (437)
T TIGR00792 370 AGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999876665
No 175
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.84 E-value=1.8e-07 Score=96.08 Aligned_cols=148 Identities=11% Similarity=0.081 Sum_probs=98.2
Q ss_pred HHHHHHHhhh---CCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 32 AVSYQLKDKL---KFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 32 ~~~~~l~~~~---g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
..+.++++.+ +.+.++.|...++..+...+ .+..|++.||+ +||+.++.+..+..+........+ +.
T Consensus 237 ~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-----g~~~~l~~~~~l~~l~~~~~~~~~----~~ 307 (396)
T TIGR00882 237 QFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-----GAKNALLIAGTIMSVRIIGSSFAT----TA 307 (396)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHHHHHHHHHHHHhcC----Ch
Confidence 4456666554 45556677766666555554 67889999995 566777777777666665545443 34
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSL-SWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLP 186 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~-~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~ 186 (493)
+.+.+..++.+++..........+..+.. |.+.++...+. .+....+|..+++.++|++.+..||+.+|.+.+++.
T Consensus 308 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~---~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~ 384 (396)
T TIGR00882 308 LEVVILKMLHAFEVPFLLVGCFKYITSQF---DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIV 384 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHH
Confidence 45566667777665443222222222222 34555555555 567889999999999999999999999999988776
Q ss_pred HHHHH
Q 011112 187 AIQLL 191 (493)
Q Consensus 187 ~l~~i 191 (493)
++..+
T Consensus 385 ~i~~~ 389 (396)
T TIGR00882 385 LLFTL 389 (396)
T ss_pred HHHHH
Confidence 66554
No 176
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.84 E-value=2.5e-08 Score=101.43 Aligned_cols=128 Identities=16% Similarity=0.133 Sum_probs=94.8
Q ss_pred eeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehh
Q 011112 318 QTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGS 397 (493)
Q Consensus 318 ~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~ 397 (493)
..+++|.|+.+.|+......++..++.++.|++.||+|+|+.+..+.++..++.+... .. ++........
T Consensus 31 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~ 100 (385)
T TIGR00710 31 IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA-LS---------NNIETLLVLR 100 (385)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH-HH---------ccHHHHHHHH
Confidence 3456899999999998888999999999999999999999999988877766543221 11 1111111111
Q ss_pred HHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 398 ALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.+.....+....+..+++.|..|+++|++.+++.+...++|..+++.+++.+.+.+|+
T Consensus 101 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 101 FVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred HHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 2222222333444567899999999999999999999999999999999998887553
No 177
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.84 E-value=1.3e-07 Score=99.18 Aligned_cols=185 Identities=16% Similarity=0.132 Sum_probs=111.1
Q ss_pred hhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhH--
Q 011112 7 VFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPY-- 82 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~-- 82 (493)
.++++.++.....++..... ......+|.|+++++|.+..+.|+..++..+...+ +++.|+++||...++..++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~ 336 (465)
T TIGR00894 257 IPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAAR 336 (465)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH
Confidence 45566677666666665544 34455678888888999999999988777766655 789999999864332222211
Q ss_pred -HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHH
Q 011112 83 -LVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGIC 161 (493)
Q Consensus 83 -ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~l 161 (493)
+..+..........+..... ..+....+++..+.+.+.+...+.......|.. ++.+|.+.|+.+....+|+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~l~~~i 411 (465)
T TIGR00894 337 KIFNGIGGLGPGIFAYALPYL-SAAFYLTIIILTLANAVSSGPLAGVLINSLDLA----PRFLGFIKGITGLPGFIGGLI 411 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcC----hhHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111111110 012223333344444443333333333444544 368999999999999999999
Q ss_pred HHHHHHHhhcc---ccHHHHHHHHHHHHHHHHHHhhcc
Q 011112 162 GSLLGGYALTN---IEIDRIFLLFTVLPAIQLLSCGLV 196 (493)
Q Consensus 162 g~~i~g~l~~~---~gw~~~f~~~~~~~~l~~i~~~~~ 196 (493)
+|.+.|++.+. .+|+..|++.++..++..+...+.
T Consensus 412 ~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 412 ASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 99999998764 348899998886666555544333
No 178
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.83 E-value=2.8e-07 Score=93.81 Aligned_cols=182 Identities=14% Similarity=0.108 Sum_probs=111.4
Q ss_pred hhhhhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCCCCchhH
Q 011112 4 LKNVFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g~~rr~~ 82 (493)
+++.++.+.+|.+...++..... ......+|.++++ .|.+.. .+...++..+.- .+-.++++||...++ +|+..
T Consensus 185 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g--~~g~~~~~d~~~r~~-~r~~~ 259 (368)
T TIGR00903 185 FGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAG--LIGVAVIPDRVARAG-LRSIY 259 (368)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHH--HHHHHHhhHHhhhhh-hHHHH
Confidence 44556777778776777664433 3445678889865 788765 444433333221 233588999863222 23333
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 83 LVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 83 ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
......+.++......... +....+++..+.+++.....+...++..|.. |++.||++.|+.+....+|++.+
T Consensus 260 ~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---p~~~rgt~~G~~~~~g~~~~~~~ 332 (368)
T TIGR00903 260 IRAAALLIAAFFLALAFEL----NRLALFAFIGIAGLLMLPAYAIIMDWIGKFC---DKELHGKAAGAIGFTSRAISVAL 332 (368)
T ss_pred HHHHHHHHHHHHHHHHHcc----ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhc---chhhcCcccchhhHHHHHHHHHH
Confidence 3333333333333333332 1222334444555655555556778888988 55899999999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHHHHhhccccc
Q 011112 163 SLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVKEN 199 (493)
Q Consensus 163 ~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~e~ 199 (493)
|.+.+.+.. +.+..|.+.+++.++..+.....+++
T Consensus 333 ~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~~~~~ 367 (368)
T TIGR00903 333 ALAAMLFIS--SAEAYFTFLAILITIAFAIALLLPND 367 (368)
T ss_pred HHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999987774 67778888776666655544433543
No 179
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.82 E-value=4e-07 Score=93.06 Aligned_cols=149 Identities=15% Similarity=0.148 Sum_probs=95.7
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
..+++++++.+|.++++.+...+...+...+ +++.|+++||+ ++|+.+..+..+..++.+.+...++ +.+.
T Consensus 220 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-----~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~ 291 (382)
T PRK10091 220 SYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-----SPLRIAAVTDFIIVLALLMLFFFGG---MKTA 291 (382)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-----CchhHHHHHHHHHHHHHHHHHHHHh---hHHH
Confidence 3456777777899999999988888777666 78999999995 4566666666666665544433221 2233
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-ccHHHHHHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN-IEIDRIFLLFTVLPAI 188 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~-~gw~~~f~~~~~~~~l 188 (493)
..++.++.+.+.....++.+....+... +.+.++.. .......+|..+||.++|++.++ .+|++.+...+++.++
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~ 367 (382)
T PRK10091 292 SLIFAFICCAGLFALSAPLQILLLQNAK--GGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFA 367 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCC--cchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHH
Confidence 3444444444443333333333333221 23444433 34567789999999999999985 6899999988766555
Q ss_pred HHH
Q 011112 189 QLL 191 (493)
Q Consensus 189 ~~i 191 (493)
...
T Consensus 368 ~~~ 370 (382)
T PRK10091 368 AMS 370 (382)
T ss_pred HHH
Confidence 543
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.78 E-value=2.4e-07 Score=97.58 Aligned_cols=158 Identities=14% Similarity=0.087 Sum_probs=111.6
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+..+......+..++.. .....++.++++.+|.++.+.|.......++..+ .++.|++.||+ +||+.+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----~~~~~~~~g 327 (485)
T TIGR00711 253 KYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-----DPRKLVTIG 327 (485)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CcHHHHHHH
Confidence 3344443444445544432 3334566788888999999999887777776665 78999999995 567777778
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
..+.+++...+....+.+.+.+......++.+++.+...++......+.. |+++||++.|+.+....+|..+|+.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 328 LILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGL---PPHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776665522111224445556667788888777666666655555 568999999999999999999999999
Q ss_pred HHhhcccc
Q 011112 167 GYALTNIE 174 (493)
Q Consensus 167 g~l~~~~g 174 (493)
+.+.++..
T Consensus 405 g~~~~~~~ 412 (485)
T TIGR00711 405 TTILTNRT 412 (485)
T ss_pred HHHHHHHH
Confidence 99887643
No 181
>PRK15075 citrate-proton symporter; Provisional
Probab=98.78 E-value=4.3e-07 Score=94.55 Aligned_cols=140 Identities=19% Similarity=0.083 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHH-HHhhcccchh
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWL-ILGLNAFFRS 105 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~-~~~~~~~~~~ 105 (493)
......+.|+++.+|.+..+.++...+..+...+ .+++|+++||+ +||+.++.+.....+... ......+. .
T Consensus 256 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-----g~r~~~~~~~~~~~~~~~~~~~~~~~~-~ 329 (434)
T PRK15075 256 LITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-----GRRPVLIAFTVLAILTAYPALSWLVAA-P 329 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 4556677888887899999888776666665555 78999999996 345555444333222111 11111111 1
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHH-HHHHHHHHHHHHHhhccccHH
Q 011112 106 STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAM-AFGGICGSLLGGYALTNIEID 176 (493)
Q Consensus 106 ~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~-~~G~~lg~~i~g~l~~~~gw~ 176 (493)
+.........+.+++.+...+....++.|.. |+++|+...++.+... .+++.++|.+.|++.++.|++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~---p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVM---PAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHC---CCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 2222333333445555555555567778887 4588999999865444 445778999999999988854
No 182
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.77 E-value=5.9e-07 Score=93.01 Aligned_cols=144 Identities=13% Similarity=0.062 Sum_probs=93.3
Q ss_pred HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhH
Q 011112 29 VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSST 107 (493)
Q Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~ 107 (493)
+...+++++++ .|.++.+.+...+...+...+ ++++|+++||+ +||+.+..+.++..+..+.....++ ...
T Consensus 250 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 321 (426)
T PRK12307 250 IFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-----GLKKTFSIGLLMSFLFIFPLFRIPQ--DNY 321 (426)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHcc--ccH
Confidence 34556677665 799999888877776666555 78999999995 4566666676665555444333321 122
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFT 183 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~ 183 (493)
.......+..+++..........++.|.+ |+++||+++|+......+|..+||.+.|++.++.|+....++..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~ 394 (426)
T PRK12307 322 LLLGACLFGLMATNVGVGGLVPKFLYDYF---PLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIV 394 (426)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHhC---cHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 11112222222221122233445667776 55899999999999999999999999999999988775444333
No 183
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.76 E-value=3.3e-07 Score=92.55 Aligned_cols=156 Identities=15% Similarity=0.075 Sum_probs=105.2
Q ss_pred hhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.++.+..+.+...+++.... ......++.++++ .|.|..+.+...+...++..+ ++++|+++||+ .+||+.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~----~~~~~~~~ 267 (355)
T TIGR00896 193 IWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRV----KDQRGIVA 267 (355)
T ss_pred hhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh----ccchHHHH
Confidence 34445555444444443332 2334456667664 799999999988888877776 78999999996 24566666
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
.+..+.+++.+.+.+.+++ .. . ....+.+++.+...+...+.+.+..+ ++++++...++.+...++|..+||.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~--~~--~-~~~~l~g~~~g~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~gp~ 340 (355)
T TIGR00896 268 VLAVLQLVGLCGLLFAPMH--GL--W-AWALVLGLGQGGAFPLALTLIGLRSR--QAAQAAALSAMAQSIGYLLAALGPL 340 (355)
T ss_pred HHHHHHHHHHHHHHHhhhh--HH--H-HHHHHHHHhhhhHhHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666655554321 11 1 13345677777776666666555432 3577889999999899999999999
Q ss_pred HHHHhhcccc
Q 011112 165 LGGYALTNIE 174 (493)
Q Consensus 165 i~g~l~~~~g 174 (493)
++|++.|+.|
T Consensus 341 ~~G~l~~~~g 350 (355)
T TIGR00896 341 FVGVLHDISG 350 (355)
T ss_pred HHHHHHHHhc
Confidence 9999998765
No 184
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.76 E-value=1.9e-07 Score=96.53 Aligned_cols=162 Identities=13% Similarity=0.078 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHh-hhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKD-KLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVL 89 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~-~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l 89 (493)
++.....+++.... ......+|+++++ +.|.+..+.+...+...+...+ .+++|+++||+ .+||..++...++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~----~~r~~~~~~~~~~ 319 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL----KERKHHTALPYLF 319 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc----CccHHHHHHHHHH
Confidence 44455556554443 3455677888876 2467788888877777777666 67899999996 2344444344333
Q ss_pred HHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 90 SLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
..++..+ ....+ +.. .......+.++|.....+.......|.. |+++|+.+.|+.+....+|..++|.+.|.+
T Consensus 320 ~~~~~~~-~~~~~--~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i 392 (412)
T TIGR02332 320 AAAGWLL-ASATD--HNL-IQLLGIIMASMGSFSAMAIFWTTPDQSI---SLQARAIAIAVINATGNIGSALSPFLIGIL 392 (412)
T ss_pred HHHHHHH-HHhcC--CHH-HHHHHHHHHHHHhhhhhhHHHhhccccc---chHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 3333322 22221 111 1112222223333222222222223333 568999999999999999999999999999
Q ss_pred hcccc-HHHHHHHHHHH
Q 011112 170 LTNIE-IDRIFLLFTVL 185 (493)
Q Consensus 170 ~~~~g-w~~~f~~~~~~ 185 (493)
.++.| |++.|++.++.
T Consensus 393 ~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 393 KDATGSFNSGLWFVAAL 409 (412)
T ss_pred cccCCCCchhHHHHHHH
Confidence 99875 99998876643
No 185
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.76 E-value=5.3e-08 Score=97.45 Aligned_cols=129 Identities=22% Similarity=0.232 Sum_probs=98.1
Q ss_pred eeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeeh
Q 011112 317 YQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYG 396 (493)
Q Consensus 317 ~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~ 396 (493)
+..+++|.|..+.+++.....++..++.++.|++.||+|+|+.+..+.++..++.+... +. ++.+..+..
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~-~~---------~~~~~~~~~ 91 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA-FA---------SNFWLLLIA 91 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-HH---------CCHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-hh---------hhHHHHhhh
Confidence 44567999999999998888999999999999999999999999988888877633222 11 112222222
Q ss_pred hHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 397 SALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
..+.+...+........++.+..|+++|++.+++.+...++|..+++.+++.+.+.+|+
T Consensus 92 ~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~ 150 (352)
T PF07690_consen 92 RFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGW 150 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHH
T ss_pred ccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccc
Confidence 23333443444555578899999999999999999999999999999999999877664
No 186
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.76 E-value=3.8e-06 Score=84.98 Aligned_cols=171 Identities=18% Similarity=0.244 Sum_probs=112.6
Q ss_pred HHHHHHHHHhHH-HhHHHHHHHHHHhh-hCCCHhhHHHHHHHHHhhHh--h-hhhhhhcccccccCCCCchhHHHHHHHH
Q 011112 15 LICLIYFTQGFR-SFVWTAVSYQLKDK-LKFSPSASQFVSAVAFFPWS--I-KPLYGILSDCIPIKGRKRIPYLVISTVL 89 (493)
Q Consensus 15 ~~~~~~f~~g~~-~~~~~~~~~~l~~~-~g~s~~~~g~~~s~~~l~~~--~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l 89 (493)
+++...|+.-+. += +.+.||+.+. .|.+.+|+..=+ .....|+ . -.+...+.|.. |.||.++++.+.
T Consensus 9 llc~~gf~~~frPsE--Pfl~~yL~~~~kn~T~~qv~~~i-~Pv~tYSyl~~l~~vflltd~l-----~Ykpviil~~~~ 80 (412)
T PF01770_consen 9 LLCLFGFFKEFRPSE--PFLTPYLTGPDKNFTEEQVNNEI-YPVWTYSYLAFLLPVFLLTDYL-----RYKPVIILQALS 80 (412)
T ss_pred HHHHHHHHHhcCCCC--ccchHHHcCCccCCCHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHH
Confidence 344445776664 22 2345677775 899999876421 1122332 2 45678999974 789999998887
Q ss_pred HHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 90 SLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
.++...++.+.+ +...+-++-+.-|+..+. ++++.+++=... |+++.-++.+....+..+|-.++.++|-.+
T Consensus 81 ~i~t~~lll~~~----sv~~mq~~q~~yg~~~a~-evay~sYiys~v---~~~~yq~vts~~raa~l~g~~~s~~lgQll 152 (412)
T PF01770_consen 81 YIITWLLLLFGT----SVLAMQLMQFFYGLATAA-EVAYYSYIYSVV---DKEHYQKVTSYTRAATLVGRFISSLLGQLL 152 (412)
T ss_pred HHHHHHHHHHHC----cHHHHHHHHHHHHHHHHH-HHHHHHHheeec---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777666554 455555666666666544 566666654444 557777888998899999989998888877
Q ss_pred hc--cccHHHHHHHHHHHHHHHHHHhhccccccc
Q 011112 170 LT--NIEIDRIFLLFTVLPAIQLLSCGLVKENRV 201 (493)
Q Consensus 170 ~~--~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~ 201 (493)
.. +.+++...++......+.++..+++|.+++
T Consensus 153 vs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 153 VSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 65 456777777666544444455567776554
No 187
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.75 E-value=9.1e-07 Score=92.69 Aligned_cols=171 Identities=20% Similarity=0.159 Sum_probs=118.4
Q ss_pred HhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhh--
Q 011112 23 QGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGL-- 99 (493)
Q Consensus 23 ~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~-- 99 (493)
+|+..+.... ..|-++++|++.++...+.-+..+.... ..++|++.||+ |.++|+.++.+.++..+..+.-.+
T Consensus 295 dg~~ti~~~~-~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~---g~k~~~~l~~~l~~~~~i~~~g~~G~ 370 (477)
T PF11700_consen 295 DGVNTIISFA-GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF---GPKTKRTLLISLILWIIIPLYGLFGF 370 (477)
T ss_pred HHHHHHHHHH-HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 6666554444 3466778999999977655555555555 67899999997 334346776666655333222111
Q ss_pred cccc--hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc-HH
Q 011112 100 NAFF--RSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE-ID 176 (493)
Q Consensus 100 ~~~~--~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g-w~ 176 (493)
.++. ..+-+.+.++-++.|+..+...+...++.+++.| +++.+..+|++....-..+.+||.+-|.+.+..| .|
T Consensus 371 ~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP---~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r 447 (477)
T PF11700_consen 371 WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIP---PGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQR 447 (477)
T ss_pred hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCC---CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 1110 1133445566667788888888899999999995 4778999999999999999999999999998776 78
Q ss_pred HHHHHHHHHHHHHHHHhhcccccc
Q 011112 177 RIFLLFTVLPAIQLLSCGLVKENR 200 (493)
Q Consensus 177 ~~f~~~~~~~~l~~i~~~~~~e~~ 200 (493)
+.+....++.++.+++.+++++++
T Consensus 448 ~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 448 YGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred hHHHHHHHHHHHHHHHHhhccchh
Confidence 888776666555555555666544
No 188
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.75 E-value=4.3e-08 Score=103.24 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=96.0
Q ss_pred CCcceeeeeecc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHhhhhhhheeccccccC
Q 011112 310 LSTVMFYYQTEI--LNLEASFLGTARVVGWVGLMLGTYTYNGYLKR-LKLRRILLLTQVGLSILSFLDIVLVSRMNLTVG 386 (493)
Q Consensus 310 ~~~~~~~~~~~~--~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~-~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g 386 (493)
..+.++.|+++. +|+|..+.|.+.....++..++.+++|++.|| +|+|+++..+.++..++.+.. ....
T Consensus 29 ~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~-~~~~------- 100 (475)
T TIGR00924 29 MQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML-AMSI------- 100 (475)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH-Hhcc-------
Confidence 344456676665 89999999999888888899999999999999 899999999988877764321 1111
Q ss_pred ccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCc---hHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 387 ISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGI---EGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 387 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
....+.++ ..+.....+....+..+++++..|+++ |++++++++...|+|..+|+.+++.+.+.+|+
T Consensus 101 -~~~~~~~~-~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 101 -YPDLIFYG-LGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred -cHhHHHHH-HHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 11111111 111222222222334567888888654 88899999999999999999999999887654
No 189
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.74 E-value=7.7e-07 Score=88.34 Aligned_cols=162 Identities=16% Similarity=0.095 Sum_probs=111.2
Q ss_pred hhchhHHHHHHHHHHH-HhHHHhHHHHHHHHHHh--hhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhH
Q 011112 7 VFGVSFLWLICLIYFT-QGFRSFVWTAVSYQLKD--KLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~-~g~~~~~~~~~~~~l~~--~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ 82 (493)
.++++.+++..+..|+ .|...-.....+.|+++ ++|.++++.+...+.+...+.+ +.+.++++||+ ++|+.
T Consensus 136 ~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-----g~~~~ 210 (310)
T TIGR01272 136 AFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-----SQGRY 210 (310)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CHHHH
Confidence 3555566644444444 33444445666778774 3799999999988888888877 68899999996 45556
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHH
Q 011112 83 LVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 83 ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
+..+..+.+++.++....+. . .......+.+++.+...+...++..+..+ ++.+.+.++. ....+|..++
T Consensus 211 l~~~~~l~~~~~~l~~~~~~----~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~----~~~~~asai~-~~~~~Gg~i~ 280 (310)
T TIGR01272 211 LAFNAFLAVLLSIGAALTHG----Y-VAMWFVLALGLFNSIMFPTIFSLALNALG----RHTSQGSGIL-CLAIVGGAIV 280 (310)
T ss_pred HHHHHHHHHHHHHHHHHcCC----H-HHHHHHHHHHHHHHHHHHHHHHHHHhhhh----hhhhhhHHHH-HHHHhcchHH
Confidence 66776666666554444331 1 12234446788888888887887777654 3344455554 5677999999
Q ss_pred HHHHHHhhccccHHHHHHHHH
Q 011112 163 SLLGGYALTNIEIDRIFLLFT 183 (493)
Q Consensus 163 ~~i~g~l~~~~gw~~~f~~~~ 183 (493)
|.+.|.+.|+.|.+..|++..
T Consensus 281 P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 281 PLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHHhccchHHHHHHH
Confidence 999999999999998887544
No 190
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.73 E-value=1.1e-07 Score=96.18 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=94.8
Q ss_pred eeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEe
Q 011112 314 MFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMV 393 (493)
Q Consensus 314 ~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~ 393 (493)
.+.+.++++|+|+.+.++......++..++.++.+++.||+|+|+.+..+.++..++.+... ... ++.+..
T Consensus 24 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~-~~~--------~~~~~~ 94 (366)
T TIGR00886 24 AVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG-LAV--------QSYSVL 94 (366)
T ss_pred hhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHh--------hhHHHH
Confidence 34345677999999999998889999999999999999999999999998888777643321 111 011111
Q ss_pred eehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhh
Q 011112 394 LYGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSL 453 (493)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~ 453 (493)
+....+.... ...+.+...++.+..|+++|++..++.....++|..+++.+++.+.+.+
T Consensus 95 ~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 153 (366)
T TIGR00886 95 LLLRLFIGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSL 153 (366)
T ss_pred HHHHHHHHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 1112222222 2234455678899999999999999999999999999999888777643
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.73 E-value=3.5e-07 Score=94.14 Aligned_cols=147 Identities=18% Similarity=0.221 Sum_probs=95.1
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHh-hhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWS-IKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~-~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
...|.++++. +.++.+.+...++...... .....+.+.||. .+.++.+..+..+..++.+.++..+ +.+.
T Consensus 229 ~~~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r----~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~ 299 (400)
T PRK11646 229 LMLPIMVNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEKR----FRLEHRLMAGLLIMSLSMFPIGMVS----NLQQ 299 (400)
T ss_pred HhhhhhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHHHHhh----hHHH
Confidence 3445566654 4477888877666554433 343445666641 2334445666666666666555543 2344
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc---cH-HHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI---EI-DRIFLLFTVL 185 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~---gw-~~~f~~~~~~ 185 (493)
..+..++.+.+.+...+..++++.|.. |+++||+++|+.+....+|..+||.++|++.++. ++ ...+...+++
T Consensus 300 ~~~~~~l~~~g~~~~~p~~~~~~~~~~---p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~ 376 (400)
T PRK11646 300 LFTLICLFYIGSIIAEPARETLSASLA---DARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGII 376 (400)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHhcC---CcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHH
Confidence 445556667777777777778888877 4599999999999999999999999999999864 22 4445444444
Q ss_pred HHHH
Q 011112 186 PAIQ 189 (493)
Q Consensus 186 ~~l~ 189 (493)
.++.
T Consensus 377 ~~~~ 380 (400)
T PRK11646 377 GLIT 380 (400)
T ss_pred HHHH
Confidence 3333
No 192
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.73 E-value=3.7e-07 Score=96.02 Aligned_cols=158 Identities=13% Similarity=0.055 Sum_probs=100.9
Q ss_pred HHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhccc-chhhHHHHHH
Q 011112 35 YQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAF-FRSSTWHLIV 112 (493)
Q Consensus 35 ~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~-~~~~~~~l~~ 112 (493)
|.+.++.|.+....++......+...+ .++.|+++||+ +||+.++.+.++.+++.++++.... ..... ....
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~-~~~~ 368 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-----GRKPLQIIGALGMAIGMFSLGTAFYTQAPGI-VALL 368 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-----cChHHHHHhHHHHHHHHHHHHHHHhcCcccH-HHHH
Confidence 344456888877666554444444444 68899999995 5777888888877777666654321 11111 1222
Q ss_pred HHHHHHhhhhh-HHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH------HhhccccHHHHHHHHHHH
Q 011112 113 LLTAQNLGSAM-ADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG------YALTNIEIDRIFLLFTVL 185 (493)
Q Consensus 113 ~~~l~~~~~~~-~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g------~l~~~~gw~~~f~~~~~~ 185 (493)
..++.+++.+. ..+...+++.|.. |+++|+++.|+......+|.++++.+.+ ++.++.+|++.|++.+++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 445 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIF---PNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhC---ChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHH
Confidence 22233333322 1245678888887 4589999999999999888888755544 445678899999888876
Q ss_pred HHHHHHHh-hccccccc
Q 011112 186 PAIQLLSC-GLVKENRV 201 (493)
Q Consensus 186 ~~l~~i~~-~~~~e~~~ 201 (493)
.++..+.. ++.||++.
T Consensus 446 ~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 446 GVLAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHHHhccccCCC
Confidence 66655544 45677654
No 193
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.69 E-value=6.1e-07 Score=104.73 Aligned_cols=173 Identities=16% Similarity=0.107 Sum_probs=118.5
Q ss_pred hchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
.+.+.++.+.+.++...+. +.....++.|+++.+|.+..+.|++.+.+.++..+ +++.|+++|+. .+++.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-----~~~~~~~~ 296 (1140)
T PRK06814 222 KADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-----ITLLYVPI 296 (1140)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeeeeehH
Confidence 4455555555555444443 34445677888888999999999999888888877 78899999863 23334444
Q ss_pred HHHHHHHHHHHHhhccc----------------chhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHH
Q 011112 86 STVLSLVPWLILGLNAF----------------FRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQS 149 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~----------------~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g 149 (493)
+.++..++.+.+.+... ...+.+.+.+..++.+++.+...++..+++.+.+ |+++||+++|
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---p~~~~G~v~g 373 (1140)
T PRK06814 297 GALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWA---NPAHRARVIA 373 (1140)
T ss_pred HHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhC---CcccceeeeH
Confidence 44443333333332100 0023455566677778888888888888888877 5699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHHHHHHHHH
Q 011112 150 LSWLAMAFGGICGSLLGGYALT-NIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 150 ~~~~~~~~G~~lg~~i~g~l~~-~~gw~~~f~~~~~~~~l 188 (493)
..+....+|..+|++++|.+.+ ..+++..+++.+++.++
T Consensus 374 ~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 374 ANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999999999999999999874 55777777665544333
No 194
>TIGR00895 2A0115 benzoate transport.
Probab=98.67 E-value=9.7e-07 Score=89.81 Aligned_cols=129 Identities=19% Similarity=0.121 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhh
Q 011112 28 FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSS 106 (493)
Q Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~ 106 (493)
......+ ++.+++|.+..+.+...+...+...+ .+++|+++||+ +||+.+.................+ +
T Consensus 268 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~ 337 (398)
T TIGR00895 268 FLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-----GPRVTALLLLLGAVFAVLVGSTLF----S 337 (398)
T ss_pred HHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----chHHHHHHHHHHHHHHHHHHHHhh----C
Confidence 3334444 55667999999999888777777666 78999999995 455444433333333322222122 2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 107 TWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 107 ~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
.+...+..++.+++.+...+...+++.|.. |+++|+++.|+......+|..+||.++|++
T Consensus 338 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 338 PTLLLLLGAIAGFFVNGGQSGLYALMALFY---PTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 334556667778888888888889988887 458999999999999999999999999976
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.67 E-value=9.1e-07 Score=103.33 Aligned_cols=167 Identities=16% Similarity=0.124 Sum_probs=116.0
Q ss_pred chhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHh-hHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 9 GVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPS-ASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~-~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
+.+.++...+..++..+. ......+++++++++|.+.. +.|++.+...++..+ .+++|+++||+ ++++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-----~~~~~~~~ 304 (1146)
T PRK08633 230 SDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-----IELGLVPL 304 (1146)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eEccchhH
Confidence 444444333333333332 34455667788888999998 889888888777766 68899999984 34555666
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.++.+++.+++.+.+ +.+.+++..++.+++.+...++.++++.+.. |+++||+++|..+....+|..+++.+
T Consensus 305 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---p~~~rg~~~~~~~~~~~lg~~~~~~~ 377 (1146)
T PRK08633 305 GALGLALSLFLLPTAP----SLASVLVLFFLFGFSAGLFIVPLNALIQFRA---PEKELGKVLAANNFLQNVGMLLFLAL 377 (1146)
T ss_pred HHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcC---CccchhhhhHHHHHHHHHHHHHHHHH
Confidence 6666666666555543 3445566667778888888778888888777 45899999999999999999888888
Q ss_pred HHHhhc-cccHHHHHHHHHHHHH
Q 011112 166 GGYALT-NIEIDRIFLLFTVLPA 187 (493)
Q Consensus 166 ~g~l~~-~~gw~~~f~~~~~~~~ 187 (493)
++.+.. ..++...|++.+.+.+
T Consensus 378 ~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 378 TTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHHhccCHHHHHHHHHHHHH
Confidence 877654 2456666666554433
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.67 E-value=1.9e-07 Score=95.69 Aligned_cols=126 Identities=13% Similarity=0.083 Sum_probs=91.3
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhH
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSA 398 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~ 398 (493)
.+++|.|+.+.++......++..++.++.|++.||+|+|+.+..+.++..++..... .. ++....+....
T Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~-~~---------~~~~~~~~~~~ 99 (392)
T PRK10473 30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS-LA---------ETSSLFLAGRF 99 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH-Hh---------CcHHHHHHHHH
Confidence 455899999999988888889999999999999999999999988877766543221 11 11111111112
Q ss_pred HHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 399 LVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
+.....+....+..+++.+..|+++|++..++.+...+++..++|.+++.+.+..|
T Consensus 100 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g 155 (392)
T PRK10473 100 LQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155 (392)
T ss_pred HHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 22222233344456788999999999999999999999999999999888876544
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=98.66 E-value=8e-07 Score=92.90 Aligned_cols=162 Identities=15% Similarity=0.095 Sum_probs=107.5
Q ss_pred hhchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.++.+.+.......++.... .......+.++++.+|.+....+.......++..+ .|++++++||+ ++|+.+.
T Consensus 224 l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-----g~~~~~~ 298 (448)
T PRK09848 224 LKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-----GKKNTFL 298 (448)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CcHHHHH
Confidence 34555555444444443332 22223344566767887665544433333344444 78999999995 5677777
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh----chhcchhHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE----RAAFAGDLQSLSWLAMAFGGI 160 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~----~~~~rg~~~g~~~~~~~~G~~ 160 (493)
.+.++..++.+.+.+.++ .+.+..++..++.++|.+...+...++..|..+.+ +.+++|...|..+....+|..
T Consensus 299 ~g~~~~~i~~~~~~~~~~--~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~a 376 (448)
T PRK09848 299 IGALLGTCGYLLFFWVSV--WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQA 376 (448)
T ss_pred HHHHHHHHHHHHHHHcCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHH
Confidence 787777777666655432 23445556667788898888889999999988532 124568889999999999999
Q ss_pred HHHHHHHHhhccccH
Q 011112 161 CGSLLGGYALTNIEI 175 (493)
Q Consensus 161 lg~~i~g~l~~~~gw 175 (493)
+|+.+.+.+.+..||
T Consensus 377 ig~~i~g~~l~~~G~ 391 (448)
T PRK09848 377 IGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999988765544
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=98.66 E-value=1.2e-06 Score=93.05 Aligned_cols=148 Identities=17% Similarity=0.019 Sum_probs=101.2
Q ss_pred hhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 011112 39 DKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQ 117 (493)
Q Consensus 39 ~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 117 (493)
++++.+......+.++ .... .++.++++||+ +||+.+..+.++..++.+.+.+.++. ..+...+..++.
T Consensus 351 ~~~~~~~~~~~~~~~~---~~i~~~~~~~~l~dr~-----grr~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~ 420 (505)
T TIGR00898 351 GNLGGNIYLDLFISGL---VELPAKLITLLLIDRL-----GRRYTMAASLLLAGVALLLLLFVPVD--LYFLRTALAVLG 420 (505)
T ss_pred cccCCChHHHHHHHHH---HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHHcCCC--chHHHHHHHHHH
Confidence 3466665443333222 2222 56788999995 57777778877777777766665432 122333444555
Q ss_pred HhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhhccc
Q 011112 118 NLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVK 197 (493)
Q Consensus 118 ~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~ 197 (493)
+++.+.......++..|.. |.+.|+.++|+......+|.+++|.+.+ + +..++...+.+.++..++..+..+++|
T Consensus 421 ~~~~~~~~~~~~~~~~e~~---p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lp 495 (505)
T TIGR00898 421 KFGITSAFQMVYLYTAELY---PTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLP 495 (505)
T ss_pred HHHHHHHHHHHHHHhcccc---cHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCc
Confidence 5666666666778888888 4588999999999999999999999998 4 445667778877777666666667788
Q ss_pred cccc
Q 011112 198 ENRV 201 (493)
Q Consensus 198 e~~~ 201 (493)
|++.
T Consensus 496 et~~ 499 (505)
T TIGR00898 496 ETKG 499 (505)
T ss_pred CCCC
Confidence 8764
No 199
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.65 E-value=5.1e-07 Score=95.84 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=83.4
Q ss_pred hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhch
Q 011112 62 KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERA 141 (493)
Q Consensus 62 ~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~ 141 (493)
.+++++++||+ +||+.++.+..+..++..+++...+.......+....+...+......+....+..|+. |.
T Consensus 352 ~~~~~~l~dr~-----gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~---p~ 423 (502)
T TIGR00887 352 YWVTVFLVDII-----GRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF---PT 423 (502)
T ss_pred HHHHHHHhhhh-----cchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC---ch
Confidence 46789999995 56777767766666555544432111001111111111111211112233456667887 55
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHhhcc----------ccHHHHHHHHHHHHHHHHHHhhcccccccc
Q 011112 142 AFAGDLQSLSWLAMAFGGICGSLLGGYALTN----------IEIDRIFLLFTVLPAIQLLSCGLVKENRVS 202 (493)
Q Consensus 142 ~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~----------~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~ 202 (493)
+.|++..|+......+|..+++.+.+++.+. .++...|++.+++.++..+..+++||++..
T Consensus 424 ~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 424 RYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 9999999999999999999999999999873 345667777776666555555678987653
No 200
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.65 E-value=9.4e-07 Score=93.67 Aligned_cols=156 Identities=17% Similarity=0.149 Sum_probs=110.3
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
++.+.........+..++.. -.....+.++++.+|.|+.+.|.......+...+ .++.|++.||+ +||+.+..
T Consensus 256 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-----g~~~~~~~ 330 (495)
T PRK14995 256 FTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-----GLRLVATG 330 (495)
T ss_pred hCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CchHHHHH
Confidence 34444443334444433321 2233556688888999999999887777777666 78999999995 45667777
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.++.+++...+..... +.+.+......++.|+|.+...++....+.+.. |+++++.+.++.+....+|..+|+.+
T Consensus 331 g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~lG~~~G~ai 406 (495)
T PRK14995 331 GMALSALSFYGLAMTDF-STQQWQAWGLMALLGFSAASALLASTSAIMAAA---PPEKAAAAGAIETMAYELGAGLGIAI 406 (495)
T ss_pred HHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcC---CHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 77777666655544321 123344456677888888888777777777765 56899999999999999999999999
Q ss_pred HHHhhcc
Q 011112 166 GGYALTN 172 (493)
Q Consensus 166 ~g~l~~~ 172 (493)
.|.+.++
T Consensus 407 ~g~i~~~ 413 (495)
T PRK14995 407 FGLLLSR 413 (495)
T ss_pred HHHHHHH
Confidence 9998764
No 201
>PRK11043 putative transporter; Provisional
Probab=98.59 E-value=4.5e-07 Score=93.13 Aligned_cols=127 Identities=16% Similarity=0.127 Sum_probs=90.2
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhH
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSA 398 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~ 398 (493)
.+++|.|+.+.|+......++..++.++.+++.||+++|+.+..+..+..+..+.. ... ++....+....
T Consensus 33 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~---------~~~~~l~~~~~ 102 (401)
T PRK11043 33 QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM-LWV---------ESAAQLLVLRF 102 (401)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH-HHh---------cCHHHHHHHHH
Confidence 45689999999999888999999999999999999999999988877666543321 111 11111111111
Q ss_pred HHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 399 LVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
+.............+++.+..|+++++..++..+...+++..++|.+++.+.+.+|+
T Consensus 103 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 159 (401)
T PRK11043 103 VQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGW 159 (401)
T ss_pred HHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 111111122222356788899999999999999988999999999999999887653
No 202
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.58 E-value=3e-06 Score=87.92 Aligned_cols=185 Identities=13% Similarity=0.031 Sum_probs=107.3
Q ss_pred hhhhhhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHh-hhhhhhhcccccccCCCCch
Q 011112 3 QLKNVFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWS-IKPLYGILSDCIPIKGRKRI 80 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~-~~~~~G~lsDr~~~~g~~rr 80 (493)
+..+.++.+..|.+++.|+...-.. -....+|.++++++. .........+..+... .+|+.|+++||+ ++|
T Consensus 244 ~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-----G~~ 316 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-----GGV 316 (462)
T ss_pred HHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-----Cch
Confidence 3445678888998888887633222 233456677777553 3322221222233333 489999999996 455
Q ss_pred hHHHHHHHHHHHHHHHH-hhccc-chhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh------------------c
Q 011112 81 PYLVISTVLSLVPWLIL-GLNAF-FRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE------------------R 140 (493)
Q Consensus 81 ~~ii~~~~l~~~~~~~~-~~~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~------------------~ 140 (493)
+.+.++.+...++.... ...+. .+.+.+.+.+..+...++.+...-....++.++.+++ .
T Consensus 317 ~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~ 396 (462)
T PRK15034 317 RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREA 396 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHH
Confidence 66666665555544322 22221 1223444444443333333343334556666666420 0
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cHHHHHHHHHHHHHHHHHHhh
Q 011112 141 AAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-EIDRIFLLFTVLPAIQLLSCG 194 (493)
Q Consensus 141 ~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-gw~~~f~~~~~~~~l~~i~~~ 194 (493)
.++-|.+.|+......+|+.+-|.+-|...+.. ++...|+...+..+++.++..
T Consensus 397 ~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 397 VTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 126778888888899998888887777776654 478888887777666665443
No 203
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=3.1e-06 Score=79.96 Aligned_cols=136 Identities=12% Similarity=0.116 Sum_probs=97.3
Q ss_pred HHHHhhhCCCHhhHHHHHHHHHh-hHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHH
Q 011112 35 YQLKDKLKFSPSASQFVSAVAFF-PWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVL 113 (493)
Q Consensus 35 ~~l~~~~g~s~~~~g~~~s~~~l-~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 113 (493)
.+.++++|.|+.+.+.+.+.... ....+|+.|.++||+ .++..|+..+.+++.++-..+.++. +.=.+.
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~----G~n~~wv~~a~~~tl~~H~~l~Ft~------lsPy~~ 358 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY----GFNLWWVASACILTLLGHSGLFFTF------LSPYTS 358 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh----cceehhHHHHHHHHHHHhhhHHhhh------ccHHHH
Confidence 35578899999999887775544 444589999999996 2444556566666666655444432 111244
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc---HHHHHHHHH
Q 011112 114 LTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE---IDRIFLLFT 183 (493)
Q Consensus 114 ~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g---w~~~f~~~~ 183 (493)
..+.|+.+....+...-+++.+.+ +++.|.+.|..+..+++|-.+-+++.|.+.|+-| |-..|.+.-
T Consensus 359 m~~lGLsysllAcslWP~va~~vp---E~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 359 MTFLGLSYSLLACSLWPCVASLVP---EEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred HHHHhhhHHHHHHHHhhhhhhhCC---HHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 456677777777767777777774 5999999999999999999999999999998654 444454433
No 204
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.56 E-value=2.8e-07 Score=97.31 Aligned_cols=133 Identities=14% Similarity=0.019 Sum_probs=90.8
Q ss_pred eeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceE
Q 011112 314 MFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKR-LKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTM 392 (493)
Q Consensus 314 ~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~-~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~ 392 (493)
+..|+++++|++..+.+.+.........+..+++|++.|| +|+||++..+.++..++.++.. +.. + +...+
T Consensus 37 l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~-~~~--~-----~~~ll 108 (489)
T PRK10207 37 LAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG-MSL--L-----KPDLI 108 (489)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-Hhc--c-----chhHH
Confidence 4456667799999888776555555555566789999999 9999999999999888754322 111 0 01111
Q ss_pred eeehhHHHHHHHHhhHhHHHHHHhhcCCCCc--hHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 393 VLYGSALVDAVNQFKFMPFLILSGQLCPPGI--EGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
++ .-.+.....+.......+++.|.+|++. |+..+++++...|+|..+||.++|.+.+.+|+
T Consensus 109 ~~-~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 109 FI-ALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred HH-HHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 11 1112222222222334678999998774 57789999999999999999999999987653
No 205
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.55 E-value=1.5e-06 Score=91.65 Aligned_cols=178 Identities=12% Similarity=0.140 Sum_probs=130.0
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+..+.+++...+..+.. .+...++++.+ ..|.+.++.+...++......+ .+++|+++|+.+ .+++....++
T Consensus 296 ~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~---~~~~~~~~~~ 371 (509)
T KOG2504|consen 296 KDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG---IRALVLFLLT 371 (509)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc---cchHHHHHHH
Confidence 3334443444444444433 45556667755 6999999999999988887777 799999999852 2344455566
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
.+...++.+.+.+.+ +++.+...-.+.|++.+.......-.+.|+.. .++...+.|+...+..++.++||.+.
T Consensus 372 ll~~gl~~~~~p~~~----~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g---~~~l~~a~Gl~l~~~gi~~l~gpPia 444 (509)
T KOG2504|consen 372 LLIAGLARLFLPFAT----TYVGLIVFSILFGFCVGSFSSLTPVILVDLVG---LEKLSNAYGLLLLFQGIGALVGPPIA 444 (509)
T ss_pred HHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---hhhcchHHHHHHHHhHHHHHcCcccc
Confidence 666666665555554 45666666667788777776666567778774 58888999999999999999999999
Q ss_pred HHhhcccc-HHHHHHHHHHHHHHHHHHhhccc
Q 011112 167 GYALTNIE-IDRIFLLFTVLPAIQLLSCGLVK 197 (493)
Q Consensus 167 g~l~~~~g-w~~~f~~~~~~~~l~~i~~~~~~ 197 (493)
|++.|..+ |...|+.+++..++....++..+
T Consensus 445 g~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 445 GLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99998777 99999999987777776666666
No 206
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.55 E-value=4.6e-07 Score=96.07 Aligned_cols=159 Identities=16% Similarity=0.053 Sum_probs=96.8
Q ss_pred hcccc-hHHHHHHHHHHHhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChhHHHHHHHH
Q 011112 288 FRQPE-ILRPMAWFFLAHVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKR-LKLRRILLLTQV 365 (493)
Q Consensus 288 l~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~-~~~r~~l~~~~~ 365 (493)
+|+|+ ++..+...++....+.......+.|+++++|+|..+.+..............+++|++.|| +|+|+.+..+.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 35554 4444433333333333333445667777799998887766544443444445688999999 599999999988
Q ss_pred HHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCc--hHHHHHHHHHHHhhhhhhhH
Q 011112 366 GLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILSGQLCPPGI--EGTLFALFMSISNFGSTVGS 443 (493)
Q Consensus 366 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~gt~~gl~~~~~~lg~~~~~ 443 (493)
+..++.... .... ...........+.....+.......+++.+..|++. ++.++++++...++|..+||
T Consensus 97 ~~~ig~~l~-~~~~--------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp 167 (500)
T PRK09584 97 VLAIGYALV-AWSG--------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSM 167 (500)
T ss_pred HHHHHHHHH-HHhc--------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHH
Confidence 877654322 1111 111111111112222223323334567888887643 45678899999999999999
Q ss_pred hHHHHhHHhhcC
Q 011112 444 FFGAGLASSLSI 455 (493)
Q Consensus 444 ~i~g~l~~~~g~ 455 (493)
.++|.+.+.+|+
T Consensus 168 ~i~g~l~~~~g~ 179 (500)
T PRK09584 168 LATPWLAAKYGW 179 (500)
T ss_pred HHHHHHHHhhCH
Confidence 999999987654
No 207
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.55 E-value=3.3e-07 Score=95.96 Aligned_cols=133 Identities=14% Similarity=0.053 Sum_probs=93.2
Q ss_pred eeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceE
Q 011112 314 MFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRL-KLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTM 392 (493)
Q Consensus 314 ~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~-~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~ 392 (493)
++.|+.+.+|+|+.+.+.+.........++.+++|++.||+ |+||.+.++.++..++.+. +.... .....+
T Consensus 32 L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ll-l~~~~-------~~~~~~ 103 (493)
T PRK15462 32 LILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV-LGASE-------IHPSFL 103 (493)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHH-HHHhh-------cchhHH
Confidence 45566667899999999887777788888899999999998 9999999998887766432 11100 000111
Q ss_pred eeehhHHHHHHHHhhHhHHHHHHhhcCCCC--chHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 393 VLYGSALVDAVNQFKFMPFLILSGQLCPPG--IEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.+.... .....+.......+++.|.+|++ .|.++++++....|+|..++|.+.+.+.+.+|+
T Consensus 104 ~l~l~l-i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw 167 (493)
T PRK15462 104 YLSLAI-IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSW 167 (493)
T ss_pred HHHHHH-HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhCh
Confidence 111111 11111222222456789999876 699999999999999999999999999887664
No 208
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.54 E-value=5e-06 Score=85.40 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=95.7
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHH
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWH 109 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~ 109 (493)
...++++++.+|.++.+.|...+...++..+ +++.+.+.||. ++|+.+..+... .+..+.+...+ +.+.
T Consensus 226 ~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-----~~~~~~~~g~~~-~~~~~~~~~~~----~~~~ 295 (393)
T PRK11195 226 FLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-----TVLRVLPAGILM-GLVVLLMALQH----SLLP 295 (393)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-----cccchHHHHHHH-HHHHHHHHHHh----HHHH
Confidence 3345677888999999999988888887776 67888998873 444555555433 33333333322 3444
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhc-chhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Q 011112 110 LIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAF-AGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFT 183 (493)
Q Consensus 110 l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~-rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~ 183 (493)
..+..++.+++.+...++.++.+.+.. |+++ +|++.+..+...++|..++..+.+.+ +..|-|..+.+.+
T Consensus 296 ~~~~~~~~G~~~g~~~~~~~~~~q~~~---~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 366 (393)
T PRK11195 296 AYPLLILIGALGGFFVVPMNALLQHRG---HVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVG 366 (393)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHhhC---cccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHH
Confidence 556666778888887777777766643 2343 79999999999999999999999866 4556555555444
No 209
>PRK10133 L-fucose transporter; Provisional
Probab=98.52 E-value=5e-06 Score=86.66 Aligned_cols=139 Identities=9% Similarity=-0.053 Sum_probs=98.9
Q ss_pred HHHHHHH-HhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 31 TAVSYQL-KDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 31 ~~~~~~l-~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
...++++ ++++|.|+.+.+.....+..++.+ +++.|+++||+ +||+.+..+..+.++..++..+.++ .
T Consensus 279 ~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-----g~~~~l~~~~~~~~~~~~~~~~~~~----~- 348 (438)
T PRK10133 279 SYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-----APHKVLAAYALIAMALCLISAFAGG----H- 348 (438)
T ss_pred HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CHHHHHHHHHHHHHHHHHHHHHcCC----h-
Confidence 3445564 567899999999988888888877 68999999995 5566666666665555444444332 1
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc-HHHHHHHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE-IDRIFLLFTV 184 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g-w~~~f~~~~~ 184 (493)
..+....+.+++.+...+...+...+..+ ++.+.+.++.. ...+|..+++.+.|.+.+..| -|..|++..+
T Consensus 349 ~~~~~~~l~glg~~~i~P~~~s~a~~~~~----~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~ 420 (438)
T PRK10133 349 VGLIALTLCSAFMSIQYPTIFSLGIKNLG----QDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPAL 420 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccc----hhhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 12345567789999998888888877653 34556666665 455788889999999999887 7888876553
No 210
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.52 E-value=1.3e-06 Score=90.46 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=101.6
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhH
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSA 398 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~ 398 (493)
.+++|.|..+.+.......++..++.++.|++.||+|+|+.+..+.++..++.+.. ... ++....+..-.
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~-~~a---------~~~~~l~~~r~ 112 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT-LFT---------TSMTQFLIARF 112 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH-HHc---------CCHHHHHHHHH
Confidence 35589999888888777788888999999999999999999998877776654322 111 11111111112
Q ss_pred HHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhh
Q 011112 399 LVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPI 478 (493)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 478 (493)
+.............+.+.+..|++++++.+++.++..+++..+|+.+++.+.+.+|+ ...+.+.+++.++..
T Consensus 113 l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw--------~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 113 IQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW--------KVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHH
Confidence 222222222222346678889999999999999999999999999999998876543 334455555555554
Q ss_pred hhh-hcccCC
Q 011112 479 AFL-FLIPKG 487 (493)
Q Consensus 479 ~~~-~~l~~~ 487 (493)
+.. +.+||+
T Consensus 185 ~~~~~~lp~~ 194 (413)
T PRK15403 185 VGLLLAMPET 194 (413)
T ss_pred HHHHHhCCCC
Confidence 433 456764
No 211
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.52 E-value=1.2e-05 Score=82.64 Aligned_cols=159 Identities=18% Similarity=0.141 Sum_probs=106.0
Q ss_pred hchhHHHHHHHHHHHHhH-HHhHHHHHHHHHHhhhC-CCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 8 FGVSFLWLICLIYFTQGF-RSFVWTAVSYQLKDKLK-FSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~-~~~~~~~~~~~l~~~~g-~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
++.+..+...+..++.+. .+..+.....|+++ .| .+.+..|...++..+.=.. -.+.+.+..| .+-|+.+.
T Consensus 204 lk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-----~g~~~ll~ 277 (400)
T PF03825_consen 204 LKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-----FGIKWLLL 277 (400)
T ss_pred hcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHHHH
Confidence 444445444455555554 35677777888876 66 6666666544443332111 1234555555 35677888
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHH----HHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHH-HHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIV----LLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAM-AFGG 159 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~----~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~-~~G~ 159 (493)
++.+..++=+.+++..+++ .+...+ .-.+.|+..+........++.+.. |++.|+++++++.... .+|.
T Consensus 278 ~a~~~~~vR~~l~a~~~~~---~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~---p~~~~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 278 LALVAYAVRWLLYAYFSDP---WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIA---PPELRATAQGLYSALSFGLGG 351 (400)
T ss_pred HHHHHHHHHHHHHHHhcCC---cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC---CccchHHHHHHHHHHHhhHHH
Confidence 8888888877777766321 122222 234588888888888888888887 5589999999988764 6999
Q ss_pred HHHHHHHHHhhccccHHHH
Q 011112 160 ICGSLLGGYALTNIEIDRI 178 (493)
Q Consensus 160 ~lg~~i~g~l~~~~gw~~~ 178 (493)
.+|..++|+++|++|-+..
T Consensus 352 ~iG~~igG~l~~~~g~~~~ 370 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGARGM 370 (400)
T ss_pred HHHHHHHHHHHHHhcchhh
Confidence 9999999999998775543
No 212
>PRK09669 putative symporter YagG; Provisional
Probab=98.51 E-value=4.8e-06 Score=86.94 Aligned_cols=163 Identities=15% Similarity=0.122 Sum_probs=98.2
Q ss_pred hhhhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhH
Q 011112 5 KNVFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 5 ~~~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ 82 (493)
++.++.+.++.+...+++..... ........+.+..++ +++..+.+.....+...+ .+++++++||+ +||+.
T Consensus 223 ~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-----gk~~~ 296 (444)
T PRK09669 223 KLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-----DRVRA 296 (444)
T ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ChHHH
Confidence 33455555554555555543332 222222333333333 333333333333444444 57899999995 56666
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh----chhcchhHHHHHHHHHHHH
Q 011112 83 LVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE----RAAFAGDLQSLSWLAMAFG 158 (493)
Q Consensus 83 ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~----~~~~rg~~~g~~~~~~~~G 158 (493)
+..+.+..++..+...+.+. ++.+.+++..++.+++.+...+...++++|..+.+ ..++.|...|.......+|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 297 FKWTIVAFVILSALIFFIPP--SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHH
Confidence 66665554443333333321 23445566667788998888899999999988531 1234456778888899999
Q ss_pred HHHHHHHHHHhhccccH
Q 011112 159 GICGSLLGGYALTNIEI 175 (493)
Q Consensus 159 ~~lg~~i~g~l~~~~gw 175 (493)
..+|+.++|.+.+..|+
T Consensus 375 ~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 375 LAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999876655
No 213
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.51 E-value=8.3e-07 Score=91.05 Aligned_cols=153 Identities=13% Similarity=0.052 Sum_probs=104.5
Q ss_pred eeeeccCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEee
Q 011112 316 YYQTEILNLEASF-LGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVL 394 (493)
Q Consensus 316 ~~~~~~~g~s~~~-~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l 394 (493)
.++.+++|+|+++ .|.+......+-.+..+..+.+.||+|.|+.+..+.+...+...+... .. +...+.
T Consensus 50 p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f-a~--------Sl~~L~- 119 (511)
T TIGR00806 50 PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL-GT--------SVWHMQ- 119 (511)
T ss_pred HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HH--------HHHHHH-
Confidence 3555679999999 899988888899999999999999999999999998887765443221 10 100111
Q ss_pred ehhHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhh
Q 011112 395 YGSALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCT 474 (493)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 474 (493)
..=++.++..+..+ +...++.+..|+++|+++.|+.++...+|..+++.+++. ...+|+. +| ..+..+.....
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr--~y---~~Ln~Isl~s~ 192 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWI--SY---STLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCch--hH---HHHHHHHHHHH
Confidence 11112222222334 667889999999999999999999999999999999998 4445543 23 33333433333
Q ss_pred hhhhhhhhccc
Q 011112 475 FIPIAFLFLIP 485 (493)
Q Consensus 475 ~~~~~~~~~l~ 485 (493)
.++++..++||
T Consensus 193 ~~a~~~a~~LP 203 (511)
T TIGR00806 193 TFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHhCC
Confidence 44444445555
No 214
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.49 E-value=5e-05 Score=76.91 Aligned_cols=128 Identities=20% Similarity=0.188 Sum_probs=81.2
Q ss_pred HHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 011112 54 VAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMI 132 (493)
Q Consensus 54 ~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali 132 (493)
+-.+|..+ |..+-++.+|+| ++.|.+ ....+.+++++..++.+ +.+.-++.-.+.+++.+..++.--++.
T Consensus 67 adi~P~l~~Kl~aP~fi~~v~---y~~Ri~--~~~~l~~~g~l~va~~~----~v~~~l~Gv~las~ssg~GE~tfL~lt 137 (402)
T PF02487_consen 67 ADILPSLLVKLIAPFFIHRVP---YWIRIL--ICVALSAAGMLLVAFSP----SVWVRLLGVVLASLSSGLGEVTFLSLT 137 (402)
T ss_pred HHHHHHHHHHHHhHhhhhhcc---chHHHH--HHHHHHHHHHhheeecc----chhHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 34456654 777777888875 544433 33445666777777664 345556677778888888887777764
Q ss_pred HHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHhhc-ccc
Q 011112 133 AEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT-NIEIDRIFLLFTVLPAIQLLSCGL-VKE 198 (493)
Q Consensus 133 ~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~-~~gw~~~f~~~~~~~~l~~i~~~~-~~e 198 (493)
... + + ...+-+..+...++++|+..-..+.+ ..+-|..++.+..++++..+..++ +|.
T Consensus 138 ~~y-~-----~--~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 138 HFY-G-----K--SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Hhc-C-----c--cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 432 1 1 24566667777777888777655555 234577888888787777665443 443
No 215
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.48 E-value=1.4e-05 Score=81.17 Aligned_cols=128 Identities=19% Similarity=0.166 Sum_probs=72.7
Q ss_pred HHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHH
Q 011112 32 AVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHL 110 (493)
Q Consensus 32 ~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l 110 (493)
..++++.+++|.++++.|...+...+...+ .++.|+++||+ +||+.+..+..+..+..+.+......+...+..
T Consensus 216 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T PRK11102 216 AGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-----GALNMLRFGLWIQFIMGIWLVVSALLDLGFWAL 290 (377)
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 345566777899999999988877776665 78999999995 566666666554333322222111001123333
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHH-HHHHHHHHHHHHH
Q 011112 111 IVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAM-AFGGICGSLLGGY 168 (493)
Q Consensus 111 ~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~-~~G~~lg~~i~g~ 168 (493)
.+...+...+.+.........+.| +.++++|++++...... .+|..+|+.+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 291 VVGVAAFVGCVSMISSNAMAVILD----EFPHMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhc----cccccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333322222222222222223322 23588999999876653 4677777776654
No 216
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.47 E-value=1.5e-06 Score=89.14 Aligned_cols=127 Identities=12% Similarity=0.052 Sum_probs=88.4
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhH
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSA 398 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~ 398 (493)
.+++|.|+.+.++......++..++.++.|++.||+|+|+.+..+.++..++.+.. ... ++....+....
T Consensus 35 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~-~~~---------~~~~~l~~~~~ 104 (394)
T PRK11652 35 ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA-LFA---------HSLTVLIAASA 104 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH-HHH---------ccHHHHHHHHH
Confidence 45689999999999888899999999999999999999999988877776654322 111 11111111111
Q ss_pred HHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 399 LVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
+.....+........+..+..++++++.+++..+....++..++|.+++.+.+..|+
T Consensus 105 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 105 IQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred HHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 222211111112235667788888999999999888888999999999988876543
No 217
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.46 E-value=2.8e-06 Score=88.27 Aligned_cols=161 Identities=19% Similarity=0.241 Sum_probs=117.8
Q ss_pred hhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
.++.+.+..+...++++.+.. +.+...+.+.+..+|.+ ...+.+..+..++..+ .|++++++||+ +||+.+.
T Consensus 221 ~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-----gk~~~~~ 294 (428)
T PF13347_consen 221 LFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-----GKKKVYI 294 (428)
T ss_pred hcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-----cceeehh
Confidence 355555555666677766653 55555666767777765 4556666666666555 79999999996 5677888
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh----chhcchhHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE----RAAFAGDLQSLSWLAMAFGGI 160 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~----~~~~rg~~~g~~~~~~~~G~~ 160 (493)
.+..+.+++.+++.+.+. .+.+.+++...+.+++.+...+...++++|+.+.+ +.++.|...|......-+|..
T Consensus 295 ~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~ 372 (428)
T PF13347_consen 295 IGLLLAALGFLLLFFLGP--GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQG 372 (428)
T ss_pred hhHHHHHHHHHHHHHHHh--hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHH
Confidence 888888888887776652 24566777888889999999899999999988642 234567888888889999999
Q ss_pred HHHHHHHHhhccccH
Q 011112 161 CGSLLGGYALTNIEI 175 (493)
Q Consensus 161 lg~~i~g~l~~~~gw 175 (493)
+++.+.+.+.+..|+
T Consensus 373 la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 373 LAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHHHHHHHHHhCc
Confidence 999998888765443
No 218
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.45 E-value=4.9e-06 Score=86.77 Aligned_cols=180 Identities=22% Similarity=0.207 Sum_probs=116.5
Q ss_pred hchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCC----CCchh
Q 011112 8 FGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKG----RKRIP 81 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g----~~rr~ 81 (493)
++..-+|++.+..|..... .+.....|.|+++.+|.+.++.|++.++-.+...+ +.++|.++||...++ .+||-
T Consensus 255 ~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rki 334 (466)
T KOG2532|consen 255 LTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKI 334 (466)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHH
Confidence 3445556566666666665 36677888999999999999999999887776654 899999999975431 13343
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHH
Q 011112 82 YLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGIC 161 (493)
Q Consensus 82 ~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~l 161 (493)
.-.++....+++++.+++.++.. . +..+++..+.....+....-...-..|.. +++.+.++|+.+....+...+
T Consensus 335 fn~i~~~~~ai~l~~l~~~~~~~-~-~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a----pq~a~~l~g~~~~~~~~~~~~ 408 (466)
T KOG2532|consen 335 FNTIAFGGPAVFLLVLAFTSDEH-R-LLAVILLTIAIGLSGFNISGFYKNHQDIA----PQHAGFVMGIINFVGALAGFI 408 (466)
T ss_pred HHhHHHHHHHHHHHeeeecCCCc-c-hHHHHHHHHHHHHcccchhhhHhhhhhcc----chHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555556555322 2 12223332221111121111111122223 377889999999999999999
Q ss_pred HHHHHHHhhc---cccHHHHHHHHHHHHHHHHHHh
Q 011112 162 GSLLGGYALT---NIEIDRIFLLFTVLPAIQLLSC 193 (493)
Q Consensus 162 g~~i~g~l~~---~~gw~~~f~~~~~~~~l~~i~~ 193 (493)
+|.+.|.+.. ...||++|++.+++.++..+..
T Consensus 409 ~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 409 APLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 9999999983 3479999999887766655443
No 219
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.45 E-value=1.5e-06 Score=89.69 Aligned_cols=128 Identities=18% Similarity=0.129 Sum_probs=94.0
Q ss_pred eeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeeh
Q 011112 317 YQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYG 396 (493)
Q Consensus 317 ~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~ 396 (493)
..++++|.|..+.|++.....++..++++..+++.||+|+|+.+..+.++..++.+....... .++...++..
T Consensus 28 ~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~-------~~~~~~~l~~ 100 (410)
T TIGR00885 28 QFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE-------IMNYTLFLVG 100 (410)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh-------hccHHHHHHH
Confidence 335679999999999999999999999999999999999999999998888776433211110 0112212222
Q ss_pred hHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 397 SALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
.++.....+....+...++.+..|++++++..++.++..++|..+++.+++.+..
T Consensus 101 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~ 155 (410)
T TIGR00885 101 LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLIL 155 (410)
T ss_pred HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2223333333444455678888999999999999999999999999999988864
No 220
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.40 E-value=1.3e-06 Score=74.59 Aligned_cols=109 Identities=18% Similarity=0.197 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILS 415 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 415 (493)
..++.+++.++.+++.||.++|+.+..+..+..+..+.. ... ++.+.......+.....+........++
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF-ALS---------SNITVLIIARFLQGFGAAFALVAGAALI 76 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH-HHh---------ccHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 456777888999999999999999988877666553221 111 1111111112222333333333446778
Q ss_pred hhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 416 GQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 416 ~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
.|..|+++|++.+++.++..++|..+++.+++.+.+..|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 115 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG 115 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc
Confidence 999999999999999999999999999999998886543
No 221
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.39 E-value=1e-05 Score=85.27 Aligned_cols=159 Identities=13% Similarity=0.047 Sum_probs=98.6
Q ss_pred chhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+.++.+...+++.... ++.....+.+.+ +..-+....+.+.++..++..+ .|++++++||+ +||+.++.+
T Consensus 229 ~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~-y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-----gkk~~~~~~ 302 (473)
T PRK10429 229 KNDQLSCLLGMALAYNIASNIINGFAIYYFT-YVIGDADLFPYYLSYAGAANLVTLILFPRLVKSL-----SRRILWAGA 302 (473)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhheeeEEE-EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CcHHHHHHH
Confidence 444444444445544443 333333333433 3333556666655555455554 68999999995 566676666
Q ss_pred HHHHHHHHHHHhh---cccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh----chhcchhHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGL---NAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE----RAAFAGDLQSLSWLAMAFGG 159 (493)
Q Consensus 87 ~~l~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~----~~~~rg~~~g~~~~~~~~G~ 159 (493)
..+.+++.+.... .+. ...+.+++.-++.+++.+...+...+++.|..+.+ ..++.|...|......-+|.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~ 380 (473)
T PRK10429 303 SIFPVLSCGVLLLMGLAAP--HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGS 380 (473)
T ss_pred HHHHHHHHHHHHHHhccCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHH
Confidence 6665544444332 121 23444555556778888888888899999987531 12334458888888899999
Q ss_pred HHHHHHHHHhhccccH
Q 011112 160 ICGSLLGGYALTNIEI 175 (493)
Q Consensus 160 ~lg~~i~g~l~~~~gw 175 (493)
.+|+.+.|++.+..|+
T Consensus 381 al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 381 AFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999998875554
No 222
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.39 E-value=6.6e-06 Score=83.00 Aligned_cols=135 Identities=14% Similarity=0.097 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHh-hHhh-hhhhhhcccccccCCCCchhHHHHHHHH
Q 011112 13 LWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFF-PWSI-KPLYGILSDCIPIKGRKRIPYLVISTVL 89 (493)
Q Consensus 13 ~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l-~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l 89 (493)
.+.+....++..+. .......++++++ +|.+.++.+...++... ...+ .+++|+++||+ +||+.++.+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-----g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-----NILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHH
Confidence 34344444444443 2444556777775 99999999987766553 3444 67899999995 556666666666
Q ss_pred HHHHHHHHhhcccch-------hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHH
Q 011112 90 SLVPWLILGLNAFFR-------SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMA 156 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~ 156 (493)
..++..+..+..... .+.+.+..+.++.+++.+...+...+++.|.. |+++||+.+|+.....+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLS---NPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc---CCCccHHHHHHHHHHHh
Confidence 655555443321110 13455666777889999999999999999988 45999999999876654
No 223
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.39 E-value=0.00044 Score=72.08 Aligned_cols=147 Identities=13% Similarity=0.140 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCC-----CHhhHHHHHHHHHhhHhh--hhhhhhcccccccCCCCchhH
Q 011112 11 SFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKF-----SPSASQFVSAVAFFPWSI--KPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 11 ~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~-----s~~~~g~~~s~~~l~~~~--~~~~G~lsDr~~~~g~~rr~~ 82 (493)
+.++.+.+.+|+..+.+ +... ++|.+++ ..+.+.++.+...+|..+ .|+.+++++|+ +|+++
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-----~~~~l 76 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-----SKEAL 76 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CHHHh
Confidence 44454556666666664 3322 3777766 336788888888888765 58999999996 45555
Q ss_pred HHHHHHHHHHHHHHHhhc--ccchh-------------------------hHHHHHHHHHHHHhhhhhHH-HHHHHHHHH
Q 011112 83 LVISTVLSLVPWLILGLN--AFFRS-------------------------STWHLIVLLTAQNLGSAMAD-VVVDAMIAE 134 (493)
Q Consensus 83 ii~~~~l~~~~~~~~~~~--~~~~~-------------------------~~~~l~~~~~l~~~~~~~~~-~~~~ali~~ 134 (493)
+-.....+....+++++. |..+. ..|...+..+...+-....- ....+.+.|
T Consensus 77 f~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 77 FYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555444444444444432 11100 01122222222333222333 366788889
Q ss_pred HhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 135 AAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 135 ~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
+++ .+|..|..+++..+.++|.++|+.+..++.
T Consensus 157 i~t---~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 157 ITT---IDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred cCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 885 488889999999999999999998888876
No 224
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.39 E-value=2.5e-06 Score=85.89 Aligned_cols=136 Identities=19% Similarity=0.256 Sum_probs=97.9
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHH-HhhHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccc------
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVA-FFPWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFF------ 103 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~-~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~------ 103 (493)
..++||+.+ +|++....+..-.+- ..+..++|+.|..+||-+.|..||||.+..+.....++..++.+..+.
T Consensus 53 sy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 53 SYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred ccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 456788775 899887665533222 245667999999999999887799999999998888888877776542
Q ss_pred -h------hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 104 -R------SSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 104 -~------~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
+ .....+++...+.=++.-....+..++..|+..+++.++| +++.+.....+|.++|...|++.
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~--Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTR--ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhc--cchhHHHHHHhcceeeeeccccc
Confidence 1 1122233333344455556667788999999875433444 89999999999999999998744
No 225
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.33 E-value=2.9e-05 Score=73.88 Aligned_cols=160 Identities=19% Similarity=0.153 Sum_probs=108.6
Q ss_pred HHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccc---hhh
Q 011112 30 WTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFF---RSS 106 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~---~~~ 106 (493)
+..-.+.+|+++|.|.+|.+.+.+.-.++..++++.|.+.|++ +.+..+.+|.+...+++..+...-+. +.+
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~-----gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~ 95 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRF-----GPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLP 95 (250)
T ss_pred hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHHHHHhCccCccc
Confidence 3445677899999999999998888888877899999999985 56777888888888888877665432 135
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Q 011112 107 TWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLP 186 (493)
Q Consensus 107 ~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~ 186 (493)
+|.+.+..++.+.+.+..++..-.... +.+| ++||.+.|+.-....+++.+-.-+-..+.+...-+..+ +.++.+
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~---~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll-~la~~~ 170 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCV---RNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLL-FLAVLP 170 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHH---HhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHH-HHHHHH
Confidence 666666666666766665543322222 3333 78999999999888888887666666665553334443 344444
Q ss_pred HHH-HHHhhccccc
Q 011112 187 AIQ-LLSCGLVKEN 199 (493)
Q Consensus 187 ~l~-~i~~~~~~e~ 199 (493)
.+. ++...++++.
T Consensus 171 ~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 171 AVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHhhheecc
Confidence 433 3344555543
No 226
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.32 E-value=2.3e-05 Score=78.54 Aligned_cols=166 Identities=16% Similarity=0.058 Sum_probs=109.7
Q ss_pred HHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhh
Q 011112 21 FTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGL 99 (493)
Q Consensus 21 f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~ 99 (493)
+.+|.+.+..... .+-++++|++..++..+.-...+.... +.++|.+.||+ +-|+.+..+.++..+.++...+
T Consensus 264 ~~DGv~til~~~~-~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-----g~k~vl~~~lvi~~~~~~~~~~ 337 (438)
T COG2270 264 YIDGVNTILAMGG-VFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-----GSKPVLMIGLVILSIAALYLIF 337 (438)
T ss_pred HHhhHHHHHHHHH-HHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCceeehHHHHHHHHHHHHHHH
Confidence 4477776444432 355778999999988766555555555 67899999996 4456766776665555443333
Q ss_pred cccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc-HHHH
Q 011112 100 NAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE-IDRI 178 (493)
Q Consensus 100 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g-w~~~ 178 (493)
.. .+..+ .++-.+.|+..+.....+.++..+.. |+++-++.+|++....-.+..+||..-+.+.+..| -|..
T Consensus 338 ~~-~~~~f---~i~gll~g~s~G~~qA~SRSy~~~lv---p~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g 410 (438)
T COG2270 338 LE-GELDF---WILGLLVGTSLGGAQASSRSYLARLV---PKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAG 410 (438)
T ss_pred cc-ccHHH---HHHHHHHHHhcchHHHHHHHHHHHhC---CCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhH
Confidence 32 12222 33334456666666677889988888 45888899999999999999999999998887443 5655
Q ss_pred HHHHHHHHHHHHHHhhccccc
Q 011112 179 FLLFTVLPAIQLLSCGLVKEN 199 (493)
Q Consensus 179 f~~~~~~~~l~~i~~~~~~e~ 199 (493)
+....++..+.++..+.+|++
T Consensus 411 ~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 411 VLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhhHhhEEeecCC
Confidence 554444433334444556655
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.28 E-value=5.4e-06 Score=86.58 Aligned_cols=172 Identities=16% Similarity=0.119 Sum_probs=107.1
Q ss_pred eeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCChhHHHHHHHHHHHHHhhhhhhheeccccccC----
Q 011112 315 FYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLK----RLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVG---- 386 (493)
Q Consensus 315 ~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~----~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g---- 386 (493)
++|. +.+|.+....+++.....+..++..++.|++.| |+|+||.++.+.....+..+..+..........+
T Consensus 28 ~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~ 106 (477)
T TIGR01301 28 TPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLD 106 (477)
T ss_pred HHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccc
Confidence 3443 458999999999988888999999999999999 5999999887644444333332222111000000
Q ss_pred ccCc----eEeeehhHHHHHHHHhhHhHHHHHHhhcCCCCch--HHHHHHHHHHHhhhhhhhHhHHHHh--HHhhcCCCC
Q 011112 387 ISDK----TMVLYGSALVDAVNQFKFMPFLILSGQLCPPGIE--GTLFALFMSISNFGSTVGSFFGAGL--ASSLSISSG 458 (493)
Q Consensus 387 ~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--gt~~gl~~~~~~lg~~~~~~i~g~l--~~~~g~~~~ 458 (493)
.... +..+....+..+.......|..+++.|.+|+++| +.+++..+...++|+.+|+.+|+.. .+.++....
T Consensus 107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~ 186 (477)
T TIGR01301 107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKT 186 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccc
Confidence 0000 0111111223334445566788899999998865 5789999999999999999999976 333444211
Q ss_pred Cc-----cchHHHHHHHHhhhhhhhhh-hhcccCC
Q 011112 459 SF-----DNLLLGISIQALCTFIPIAF-LFLIPKG 487 (493)
Q Consensus 459 ~~-----~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 487 (493)
.. .++...|.+.+++.++..+. +..+||.
T Consensus 187 ~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 187 EACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 10 14555666666555555444 3566664
No 228
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.28 E-value=5.1e-05 Score=74.66 Aligned_cols=173 Identities=17% Similarity=0.129 Sum_probs=119.5
Q ss_pred hchhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 8 FGVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
.+.+.-|.+.+..=+|.+. +.....+|.++.| .|+|.++.|...++..+.-.. +...-.+++|. ..+|+..+.
T Consensus 205 w~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~----~n~r~~~~~ 279 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRS----KNQRPLVVL 279 (395)
T ss_pred ccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHh----cccchHHHH
Confidence 3444455454444455554 4666788888775 899999999988877654432 44455566663 356667666
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
....+.++...+.+.|.+.. +...++.|+|.+...+..-.++.+.++ ++++.++..|+.+...++=...||.+
T Consensus 280 ~~~~~l~G~~G~~~~P~~~~-----~lw~~llG~G~G~~F~laL~li~~rs~--~a~~Aa~LSgmaQg~GYllAa~GP~l 352 (395)
T COG2807 280 ALLLMLVGLVGLLLAPGQLP-----ILWALLLGLGQGGAFPLALTLILLRSS--DAAIAAALSGMAQGVGYLLAAFGPWL 352 (395)
T ss_pred HHHHHHHHHHHHHHhhhhHH-----HHHHHHHhCccchHHHHHHHHHHhhcC--ChHHHHHHHHHhhhhhHHHHhhhhhh
Confidence 66677777777777764321 122367899988888888888888765 46888888888777777777789999
Q ss_pred HHHhhccc-cHHHHHHHHHHHHHHHHHH
Q 011112 166 GGYALTNI-EIDRIFLLFTVLPAIQLLS 192 (493)
Q Consensus 166 ~g~l~~~~-gw~~~f~~~~~~~~l~~i~ 192 (493)
.|++-|.. +|+.+.+..+...++..+.
T Consensus 353 ~G~lhDa~gsw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 353 FGFLHDATGSWSAPLVLLALATLLMLIF 380 (395)
T ss_pred HhHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 99999854 5998887776655555443
No 229
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.28 E-value=1.8e-05 Score=85.91 Aligned_cols=155 Identities=14% Similarity=0.155 Sum_probs=114.4
Q ss_pred HHHHHhhhCCCHhhHHHHHHHH-HhhHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch----hhHH
Q 011112 34 SYQLKDKLKFSPSASQFVSAVA-FFPWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR----SSTW 108 (493)
Q Consensus 34 ~~~l~~~~g~s~~~~g~~~s~~-~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~----~~~~ 108 (493)
..|+.+.+|.+.++.......+ .+.+....+.|.++|++ .+|++.+.++.++..++..++++..... ....
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~----lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~ 86 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW----LGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDL 86 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHH
Confidence 4456677999988766655544 34555566899999985 6888899999888888887776542110 1122
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-------cHHHHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNI-------EIDRIFLL 181 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~-------gw~~~f~~ 181 (493)
..++...+.+.|.+..-+...+...|..++++.++|-+...+++.+.++|+.+++.+.+++.++. +|...|.+
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i 166 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGV 166 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Confidence 24456667788888888888899999886544456888999999999999999999999987443 69999998
Q ss_pred HHHHHHHHHHH
Q 011112 182 FTVLPAIQLLS 192 (493)
Q Consensus 182 ~~~~~~l~~i~ 192 (493)
.++..++.++.
T Consensus 167 ~~i~m~ia~lv 177 (654)
T TIGR00926 167 PAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHH
Confidence 88666555543
No 230
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.21 E-value=6.6e-05 Score=77.99 Aligned_cols=177 Identities=19% Similarity=0.143 Sum_probs=112.5
Q ss_pred HHHHHHHHhHHH--hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHH
Q 011112 16 ICLIYFTQGFRS--FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLV 92 (493)
Q Consensus 16 ~~~~~f~~g~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~ 92 (493)
.+...+.+-+++ .++..-..++++ -|++..+..+..........+ ..+...+.||. +||+.++.+...+.+
T Consensus 274 ~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-----gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 274 GIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-----GRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcHHHHHHHHHHHH
Confidence 445556666653 333333445564 799999887766555444443 67888999995 689999999988888
Q ss_pred HHHHHhhcccchhhH----H-HHHHHHHHH--HhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 93 PWLILGLNAFFRSST----W-HLIVLLTAQ--NLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~----~-~l~~~~~l~--~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+.+++...-...+.. + ..+++.++. .++.|.. +...-+.+|++ |++.|..++++.....-+...+-...
T Consensus 348 ~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf---~~~~R~aa~s~~~~~~w~~~fiv~~~ 423 (485)
T KOG0569|consen 348 ALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELF---PQSARSAAQSVATAVNWLSNFIVGFA 423 (485)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhC---CccchHHHHHHHHHHHHHHHHHHHHH
Confidence 877765442211111 1 122333333 3333333 45667889999 45889999998877777776665555
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHHHH-hhccccccccc
Q 011112 166 GGYALTNIEIDRIFLLFTVLPAIQLLS-CGLVKENRVST 203 (493)
Q Consensus 166 ~g~l~~~~gw~~~f~~~~~~~~l~~i~-~~~~~e~~~~~ 203 (493)
--.+.+..|- +.|.+..+...+..+. ++.+||+|.+.
T Consensus 424 fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 424 FPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 5566666664 6777777666666654 45789998544
No 231
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.17 E-value=0.0002 Score=73.05 Aligned_cols=185 Identities=15% Similarity=0.188 Sum_probs=119.3
Q ss_pred hhhhhchhHHHHHHHHHHH-HhHHHhHHHHHHHHHHhhhCCCH----hhHHHHHHHHHhhHhh-hhhhhhcccccccCCC
Q 011112 4 LKNVFGVSFLWLICLIYFT-QGFRSFVWTAVSYQLKDKLKFSP----SASQFVSAVAFFPWSI-KPLYGILSDCIPIKGR 77 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~~~f~-~g~~~~~~~~~~~~l~~~~g~s~----~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~ 77 (493)
+.+.++.+..|.+.+...- ...-....+..+.|.++.+. +. +..|.+.+.....=+. -.+..++.+|+
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~-~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri----- 286 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQ-SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI----- 286 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 3445677777744333222 22223444445667676443 43 3344444433322222 23456677775
Q ss_pred CchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHH-HHHHH
Q 011112 78 KRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLS-WLAMA 156 (493)
Q Consensus 78 ~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~-~~~~~ 156 (493)
+-|+.++++....++=+..+++++ +.+.+.+...+.++-.+..-+..--++.+..+ ++..+....+. .....
T Consensus 287 g~k~~Lllag~i~~iRi~~~~~~~----~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd---~rlsAt~y~v~~~~~~~ 359 (412)
T PF01306_consen 287 GAKNLLLLAGVIMAIRIIGSGFAT----NPWVISLIKLLHALEFPLLLVAAFKYITAHFD---KRLSATLYLVGFQFAKQ 359 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHT------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----GGGHHHHHHHHHTTTHH
T ss_pred ChHhHHHHHHHHHHHHHHHHhhhc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HhHHHHHHHHHHHHHHH
Confidence 567777788778888888888876 45677889999999888888888888887774 46666677764 57778
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHh-hccccccc
Q 011112 157 FGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSC-GLVKENRV 201 (493)
Q Consensus 157 ~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~-~~~~e~~~ 201 (493)
+|..+.+.++|.++|+.|.+.+|++++.+.+...+.. +.++++++
T Consensus 360 ~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 360 IGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 9999999999999999999999999887766655544 44554443
No 232
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.16 E-value=0.00024 Score=68.32 Aligned_cols=157 Identities=27% Similarity=0.252 Sum_probs=107.9
Q ss_pred HHHHhHHH-hHHHHHHHHHHhhhCCCH--hhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHH
Q 011112 20 YFTQGFRS-FVWTAVSYQLKDKLKFSP--SASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWL 95 (493)
Q Consensus 20 ~f~~g~~~-~~~~~~~~~l~~~~g~s~--~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~ 95 (493)
.+...+.. ......+ .+.++++.+. .+.++..+.+.+...+ .+++|.++||+ +||+.++.+......+.+
T Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~~~~~~~~~~~~ 84 (338)
T COG0477 11 ALLLGLDLGLLSPALP-LLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-----GRRKVLIIGLLLFLLGTL 84 (338)
T ss_pred HHHHHHhcchHHHHHH-HHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-----cchHHHHHHHHHHHHHHH
Confidence 34444443 3333333 3344566565 4778888888887776 58999999985 455666666654444445
Q ss_pred HHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHH-HHHHHHHHHHHHHHHhhcc--
Q 011112 96 ILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWL-AMAFGGICGSLLGGYALTN-- 172 (493)
Q Consensus 96 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~-~~~~G~~lg~~i~g~l~~~-- 172 (493)
.+.+.++ ...+.+.+.|+.++++.+...+...+++.|..++ . ++|+...+.... ...+|..+++.+++.+...
T Consensus 85 ~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T COG0477 85 LLALAPN--VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A-TERGLAVGLVTLGAGALGLALGPLLAGLLLGALL 160 (338)
T ss_pred HHHhCcc--chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555542 2466788889889999988888999999998742 1 578888888888 5888889998888877654
Q ss_pred ccHHHHHHHHHHHH
Q 011112 173 IEIDRIFLLFTVLP 186 (493)
Q Consensus 173 ~gw~~~f~~~~~~~ 186 (493)
.+||+.|.......
T Consensus 161 ~~~~~~~~~~~~~~ 174 (338)
T COG0477 161 WGWRAAFLLAALLG 174 (338)
T ss_pred cchHHHHHHHHHHH
Confidence 67998766655443
No 233
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.15 E-value=4.4e-06 Score=82.28 Aligned_cols=114 Identities=12% Similarity=0.108 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHH
Q 011112 324 LEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAV 403 (493)
Q Consensus 324 ~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 403 (493)
-+....|.+....++.-.+.++++|.+.||+|||.++.++.+..+++.+++. . +....++ .+.-++
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~--~---------S~~F~af---v~aR~l 130 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWA--L---------SRNFAAF---VLARFL 130 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH--H---------HHHHHHH---HHHHHh
Confidence 3444567777777888889999999999999999999999887777543321 1 1111010 111122
Q ss_pred HH---hhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 404 NQ---FKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 404 ~~---~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
++ ....+..++++|+.++++|+.++++++...++|-.+||++||++.+
T Consensus 131 ~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 131 GGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 22 2344567899999999999999999999999999999999999998
No 234
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.13 E-value=9.9e-06 Score=80.32 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=102.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHH
Q 011112 322 LNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVD 401 (493)
Q Consensus 322 ~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 401 (493)
.+-+..+.|++...-++..++.+++.|.+.||+|+|..++++.+++..+..+..+ . ....+.+..=.++.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf-g---------~sy~~l~vAR~LQg 170 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF-G---------NSYPMLFVARSLQG 170 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH-c---------chhHHHHHHHHHhh
Confidence 4445668899998899999999999999999999999999999999887643221 1 11121111112222
Q ss_pred HHHHhhHhHHHHHHhhcCCCCc-hHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhh
Q 011112 402 AVNQFKFMPFLILSGQLCPPGI-EGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAF 480 (493)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~p~~~-~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (493)
....+....-++++++.+|++. |++++|..-.+..+|..+||.+||.++|..|...+ |+++++..++-.++
T Consensus 171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aP--------FlVL~~v~Lld~~L 242 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAP--------FLVLAIVLLLDGAL 242 (464)
T ss_pred hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCc--------HHHHHHHHHHHHHH
Confidence 3333445555778889998766 59999999999999999999999999999887643 34555555555444
No 235
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.10 E-value=3.4e-06 Score=91.79 Aligned_cols=165 Identities=13% Similarity=0.092 Sum_probs=107.1
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccc-c-ccC----------
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMN-L-TVG---------- 386 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~-~-~~g---------- 386 (493)
.+.++++..+.|++.....++..++.++.+++.||.++++.+.++.+++.++.++.. +.+... . ..+
T Consensus 60 ek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~a-lphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 60 ERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLS-LPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred hhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHh-ChHHhcCCcccccccccccccc
Confidence 455899999999998888889999999999999999999999999888888765432 111000 0 000
Q ss_pred ---------------------------cc-CceEeeehhHHHHHHHHhh----HhHHHHHHhhcCCCCchHHHHHHHHHH
Q 011112 387 ---------------------------IS-DKTMVLYGSALVDAVNQFK----FMPFLILSGQLCPPGIEGTLFALFMSI 434 (493)
Q Consensus 387 ---------------------------~~-~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~gt~~gl~~~~ 434 (493)
.. ...+. ...+..+..++. +....+++.|..|++.++.+.++++..
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~ 216 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWL--LFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESI 216 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceeh--hhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHH
Confidence 00 00111 111223333222 222357899999999999999999999
Q ss_pred HhhhhhhhHhHHHHhHHhhc-C----------CC--CCccc-hHHHHHHHHhhhhhhhhhhhcccC
Q 011112 435 SNFGSTVGSFFGAGLASSLS-I----------SS--GSFDN-LLLGISIQALCTFIPIAFLFLIPK 486 (493)
Q Consensus 435 ~~lg~~~~~~i~g~l~~~~g-~----------~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 486 (493)
..+|..+|+.+++.+.+.+. + .. +.+-+ ++..+.+.+++.++..+.+..+||
T Consensus 217 ~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 217 AVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999987542 1 11 11212 455566666555554443444443
No 236
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.00 E-value=2.1e-05 Score=82.71 Aligned_cols=129 Identities=12% Similarity=0.013 Sum_probs=94.1
Q ss_pred HhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch------hhHHHH
Q 011112 38 KDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR------SSTWHL 110 (493)
Q Consensus 38 ~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~------~~~~~l 110 (493)
.+++|.+++++|...+...+...+ ..+.+.+.+|+ +.|+.+.++.++.+++.+......+.. .+.+..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-----~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-----PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 356999999999887776665555 56677777764 567777777777766654432111000 112233
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 011112 111 IVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE 174 (493)
Q Consensus 111 ~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g 174 (493)
...-.+.+++.+....+...++.+..+ ++++|..+++.....++|..+++.++|.+.++.|
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p---~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCP---SGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCC---CCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 444567788888888888999999884 5899999999999999999999999999998777
No 237
>PRK11462 putative transporter; Provisional
Probab=98.00 E-value=0.00062 Score=71.49 Aligned_cols=161 Identities=12% Similarity=0.068 Sum_probs=86.5
Q ss_pred hhchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHH
Q 011112 7 VFGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLV 84 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii 84 (493)
..+.+.+..+...+++..+.. ........+.+..+| ++...+.+.+.+.++..+ .+++++++||+ +||+.+.
T Consensus 224 ~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~-----gkk~~~~ 297 (460)
T PRK11462 224 IWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWK-----CKVTIFW 297 (460)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ChHHHHH
Confidence 345555554544555554443 333333444444444 444445455555555554 57899999995 3444444
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh----chhcchhHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE----RAAFAGDLQSLSWLAMAFGGI 160 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~----~~~~rg~~~g~~~~~~~~G~~ 160 (493)
.+.....+...+..+.+.. +...+++..++.+++.+...+...+++.|..+.+ ..++-|...+......-+|..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~a 375 (460)
T PRK11462 298 WTNALLAVISLAMFFVPMQ--ASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLA 375 (460)
T ss_pred HHHHHHHHHHHHHHHhchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 3333222222223333321 2222333444556666666666788888877531 122223335666677888999
Q ss_pred HHHHHHHHhhccccH
Q 011112 161 CGSLLGGYALTNIEI 175 (493)
Q Consensus 161 lg~~i~g~l~~~~gw 175 (493)
+|+.++|.+.+..|+
T Consensus 376 lg~~i~g~iL~~~Gy 390 (460)
T PRK11462 376 FGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999988888764443
No 238
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.82 E-value=0.00039 Score=71.71 Aligned_cols=159 Identities=17% Similarity=0.120 Sum_probs=106.9
Q ss_pred chhHHHHHHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 9 GVSFLWLICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
+.+-+..+++.+++.... .+.......|.+..+|-++.+..........+... .+++-.+++|+ +||+...++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-----gkk~~~~~~ 308 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-----GKKKLFLIG 308 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----chHHHHHHH
Confidence 444444344445444333 35555555565555665555555544444444445 57899999985 678888899
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh----chhcchhHHHHHHHHHHHHHHHH
Q 011112 87 TVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE----RAAFAGDLQSLSWLAMAFGGICG 162 (493)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~----~~~~rg~~~g~~~~~~~~G~~lg 162 (493)
.++.+++.+.+.+.+ +++....++..++.++|.+...+...++++|..+-+ ..++-|-..|......=+|..++
T Consensus 309 ~~~~~i~~~~~~f~~--~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala 386 (467)
T COG2211 309 LLLLAVGYLLLYFTP--AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALA 386 (467)
T ss_pred HHHHHHHHHHHHhhc--CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHH
Confidence 999999988888876 245667778888999999999999999999887532 22334455566666666888888
Q ss_pred HHHHHHhhcccc
Q 011112 163 SLLGGYALTNIE 174 (493)
Q Consensus 163 ~~i~g~l~~~~g 174 (493)
..+.|++.+..|
T Consensus 387 ~~~~g~~L~~~G 398 (467)
T COG2211 387 GFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHcC
Confidence 888787776443
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.78 E-value=0.0002 Score=73.84 Aligned_cols=164 Identities=16% Similarity=0.187 Sum_probs=122.5
Q ss_pred HHHHHHHHhHH-HhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHH
Q 011112 16 ICLIYFTQGFR-SFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVP 93 (493)
Q Consensus 16 ~~~~~f~~g~~-~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~ 93 (493)
+++..++.|+. +++..++-.+++ |.|-.+..-|........+=+. =++.+++..++ ++.+.+.+++....+=
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-----GHv~v~~lgLa~~~~R 449 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-----GHVNVMYLGLACNVGR 449 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-----cccceeeehhhHHHHH
Confidence 44555666764 588888877766 4776666667433333333333 35667888874 6777887887777776
Q ss_pred HHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHH-HHHHHHHHHHHHHhhcc
Q 011112 94 WLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAM-AFGGICGSLLGGYALTN 172 (493)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~-~~G~~lg~~i~g~l~~~ 172 (493)
++.++... +.|..+-.-+++++..+..+...-+++++.. ||+.|..++++..... .+|--+|.+|||.+.++
T Consensus 450 f~~~S~L~----n~W~vLPieilqgit~aliWaa~~sY~s~va---Pp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~ 522 (618)
T KOG3762|consen 450 FLYYSYLQ----NPWMVLPIEILQGITHALIWAAIISYASHVA---PPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER 522 (618)
T ss_pred HHHHHHhc----CchheeeHHHHHHHHHHHHHHHHHHHHHhhC---CCcchHHHHHHHHHHhcccCcchhhhhhhhhhee
Confidence 76666664 4667777889999999999999999999988 5688999999887655 47778999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHH
Q 011112 173 IEIDRIFLLFTVLPAIQLLS 192 (493)
Q Consensus 173 ~gw~~~f~~~~~~~~l~~i~ 192 (493)
++-|..|.+.++.+++.++.
T Consensus 523 fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 523 FGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred ehhHHHHHHHHHHHHHHHHH
Confidence 99999999988777666653
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.00024 Score=70.95 Aligned_cols=140 Identities=13% Similarity=0.092 Sum_probs=97.8
Q ss_pred HhcccCCCcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccc
Q 011112 304 HVAVPNLSTVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNL 383 (493)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~ 383 (493)
+......+..+.+.+++.++.+..+.+++......+-.+.++..+++.+|+|+|+.++.+..++++...+......
T Consensus 25 ~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~---- 100 (422)
T COG0738 25 WGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS---- 100 (422)
T ss_pred HHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh----
Confidence 3444455566655566779999999999988888888899999999999999999999999988886543211111
Q ss_pred ccCccCceEeeehhH-HHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 384 TVGISDKTMVLYGSA-LVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 384 ~~g~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
..+..+.++..+ +.... ++.=.....++..+-+++..+.-..+...++.+|..++|.+++.+..
T Consensus 101 ---~~~y~~FL~~lFila~Gi-~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 101 ---SKSYGFFLVALFILASGI-GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred ---hhhHHHHHHHHHHHHhhh-HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 011111111111 11111 11112234567788888888889999999999999999999999887
No 241
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.00021 Score=76.22 Aligned_cols=148 Identities=14% Similarity=0.154 Sum_probs=98.3
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHH
Q 011112 320 EILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSAL 399 (493)
Q Consensus 320 ~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~ 399 (493)
+..+.+.....+...+..+|.++|++++|.+.||+|||+++..+.++..+..+... +. ++....+..=++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a-~a---------~~~~~~~~~Rfl 180 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA-FA---------PNYWMFLIFRFL 180 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH-Hh---------CcHHHHHHHHHH
Confidence 33556666777778889999999999999999999999999999998887653321 11 222222222223
Q ss_pred HHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhh
Q 011112 400 VDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIA 479 (493)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (493)
.++.....+.....+.+|..+++.|+.+..+ ......++.+++..++++... +.+...+.++.+++.++
T Consensus 181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~----------Wr~~~~~~~~~~~~~~~ 249 (521)
T KOG0255|consen 181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD----------WRWLFWIISIPSGLFLL 249 (521)
T ss_pred HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHH
Confidence 3333333333446788999999999999999 777777888888888877762 23344444444444444
Q ss_pred hhhcccCCC
Q 011112 480 FLFLIPKGA 488 (493)
Q Consensus 480 ~~~~l~~~~ 488 (493)
+..+.||..
T Consensus 250 ~~~l~~Es~ 258 (521)
T KOG0255|consen 250 LWFLPPESP 258 (521)
T ss_pred HHHccCcCh
Confidence 333444554
No 242
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.70 E-value=0.0097 Score=61.55 Aligned_cols=105 Identities=10% Similarity=0.006 Sum_probs=74.2
Q ss_pred HHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 011112 54 VAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMI 132 (493)
Q Consensus 54 ~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali 132 (493)
+....+.+ +.+.+.+.|++ +-|+.++++........+.....+ -+.+++.-.+.|+|.+....---.+.
T Consensus 58 iiY~~ftv~~l~~psiv~~i-----~~K~~lv~ga~~y~~f~~gfl~~N-----~y~~yfssallG~Gaallw~GqG~yl 127 (461)
T KOG3098|consen 58 IIYAFFTVSCLFAPSIVNFL-----GPKWALVIGATCYAAFPLGFLFPN-----SYYLYFSSALLGFGAALLWTGQGGYL 127 (461)
T ss_pred HHHHHHHHHHHhhHHHHHHh-----hHHHHHHHHhHHHHHHHHHHHhcc-----hHHHHHHHHHhhhhHHheecccceeh
Confidence 33444444 67889999985 578888888888777666555543 33456777788999887665545555
Q ss_pred HHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011112 133 AEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT 171 (493)
Q Consensus 133 ~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~ 171 (493)
.+..+ ++++.+..++.|.....+.++|.++...+..
T Consensus 128 t~~st---~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~ 163 (461)
T KOG3098|consen 128 TSNST---RETIERNISIFWAIGQSSLIIGGIILFIYFQ 163 (461)
T ss_pred hhcCC---hhhHHHHHHHHHHHHHHHHHhhhHhheeeeE
Confidence 55554 4778888999999999988888777655543
No 243
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.67 E-value=0.0032 Score=63.48 Aligned_cols=152 Identities=16% Similarity=0.092 Sum_probs=115.7
Q ss_pred HHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhh-hhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHH
Q 011112 30 WTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKP-LYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTW 108 (493)
Q Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~-~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~ 108 (493)
..-+.||=-+.||+|..|...+.+.+..+..++. +.|.+..| +.++++...+++..++++..+...+... .+.+
T Consensus 228 D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~----~~~~~~~a~~G~~~~~~~f~lii~a~~~-~~~~ 302 (403)
T PF03209_consen 228 DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR----RLGKKRTAALGCLLGALAFALIILAGPL-GSPW 302 (403)
T ss_pred HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCchHHHHHHHHHHHHHHHHHHHHHhc-ccch
Confidence 4445677788999999999988888887766653 56777664 3566777778888877776665544221 2456
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc----------cccHHHH
Q 011112 109 HLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT----------NIEIDRI 178 (493)
Q Consensus 109 ~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~----------~~gw~~~ 178 (493)
.+-...++.|++.+...+..-+.+.|++. +++.|..+|.+...+.++.-+|..+||.+.| ..+|..+
T Consensus 303 ~~~~~~~l~G~g~G~f~vgals~mM~lt~---~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~V 379 (403)
T PF03209_consen 303 LFRPGVFLLGLGNGLFTVGALSLMMDLTS---AGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVV 379 (403)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCC---CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHH
Confidence 67778888999999999999999999985 4788999999999999999999999997765 2357888
Q ss_pred HHHHHHHHHHH
Q 011112 179 FLLFTVLPAIQ 189 (493)
Q Consensus 179 f~~~~~~~~l~ 189 (493)
|.+.++..++.
T Consensus 380 F~lEa~ll~~a 390 (403)
T PF03209_consen 380 FALEAVLLLAA 390 (403)
T ss_pred HHHHHHHHHHH
Confidence 88877554433
No 244
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.62 E-value=6.4e-06 Score=83.22 Aligned_cols=123 Identities=17% Similarity=0.185 Sum_probs=92.2
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeeh-hH
Q 011112 320 EILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYG-SA 398 (493)
Q Consensus 320 ~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~-~~ 398 (493)
+.+|.++...|++..+-.+..++++++.|++.||+.|++++.++..+-.++.+..- + .. .+|... +=
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~-f----------s~-~Fwq~~l~R 128 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG-F----------SN-HFWQVLLCR 128 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH-H----------HH-HHHHHHHHH
Confidence 34888999999999999999999999999999999999999999888776532211 1 11 112111 00
Q ss_pred HHHHHHHhhHhHH-HHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhc
Q 011112 399 LVDAVNQFKFMPF-LILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLS 454 (493)
Q Consensus 399 ~~~~~~~~~~~~~-~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g 454 (493)
..-.+++..+.|. ..++++..|.++|++.+++++.....|..+|-.+|+.+.+..+
T Consensus 129 ~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 129 GFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 1112234455565 6789999999999999999999999999999888888887654
No 245
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.57 E-value=0.0027 Score=67.92 Aligned_cols=184 Identities=14% Similarity=0.058 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHh---hHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHH
Q 011112 11 SFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPS---ASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 11 ~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~---~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
+.+...++..|+.|+.. -....-|......++-+.. ..++......++-.. +.+.|.+.-++ +|-|+.++.
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i----r~~Kw~li~ 385 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI----RHIKWQLIF 385 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc----cchhHHHHH
Confidence 34444455666766543 1112223333444555442 455544444444333 45677777654 245556667
Q ss_pred HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 86 STVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
+..+..+++.+++..... +....+..-++.+++.+....+....+.-.. |+++.|.+.|+......+|+.+|..+
T Consensus 386 ~~~~~ta~~Gama~~~~~--n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~---p~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 386 GSVLMTAFCGAMAAVRPD--NKNAAIAFLVLAGFGIGGILVPAIVIAQLIV---PDEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHHHHHHHHHHccCC--CcchHHHHHHHHHHhHHHHHHHHHHeeEeee---CchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 766666655555544321 2223345666778888777666544433233 45889999999999999999988887
Q ss_pred HHHhhcc--------------------------------------------------------------ccHHHHHHHHH
Q 011112 166 GGYALTN--------------------------------------------------------------IEIDRIFLLFT 183 (493)
Q Consensus 166 ~g~l~~~--------------------------------------------------------------~gw~~~f~~~~ 183 (493)
-..+..+ .++|++++...
T Consensus 461 y~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~si 540 (599)
T PF06609_consen 461 YNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSI 540 (599)
T ss_pred HHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544421 15789999888
Q ss_pred HHHHHHHHHhhccccccccc
Q 011112 184 VLPAIQLLSCGLVKENRVST 203 (493)
Q Consensus 184 ~~~~l~~i~~~~~~e~~~~~ 203 (493)
..+++..+.++++++.++..
T Consensus 541 aFG~vaiiaa~fl~d~~~~m 560 (599)
T PF06609_consen 541 AFGVVAIIAALFLGDIDKYM 560 (599)
T ss_pred HHHHHHHHHHHHcCChHHhh
Confidence 77777777888888765443
No 246
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.00047 Score=72.37 Aligned_cols=160 Identities=17% Similarity=0.263 Sum_probs=109.1
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhH
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSA 398 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~ 398 (493)
+++.++...+++.+..+..++-+++.+..+.+.||.+.++.+....++..+..++... ++ +....++.=+
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~-~~---------s~~~~ialr~ 142 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA-VH---------SFPGLIALRF 142 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-Hh---------hhHHHHHHHH
Confidence 4567888889999988899999999999999999999888887777766554322221 11 1111112223
Q ss_pred HHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhh-
Q 011112 399 LVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIP- 477 (493)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 477 (493)
+.+.+.+..+.+...++.+.+.++++|+-+|++++..++|+.+|+.+...+.+.-|. ....++.+.+++..+++++-
T Consensus 143 llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~--~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 143 LLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS--GGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC--CCcCCceeehhHHHHHHHHHH
Confidence 334444445555667899999999999999999999999999999888776653222 12234556677755555444
Q ss_pred hhhhhcccCCCCC
Q 011112 478 IAFLFLIPKGATG 490 (493)
Q Consensus 478 ~~~~~~l~~~~~~ 490 (493)
++..+++|+..++
T Consensus 221 i~~f~~lp~~P~~ 233 (495)
T KOG2533|consen 221 IVVFFFLPDNPSK 233 (495)
T ss_pred heEEEEecCChhh
Confidence 4444677766553
No 247
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.49 E-value=0.00065 Score=72.39 Aligned_cols=144 Identities=15% Similarity=0.169 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhh
Q 011112 328 FLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFK 407 (493)
Q Consensus 328 ~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 407 (493)
+.+++.....++..+++++.+++.|++|||+.+.++.+...++.++.... ++....+.+-.+.++..+..
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a----------~~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA----------PSWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHhccchhhh
Confidence 45788888889999999999999999999999999999888876543221 11111222223333333334
Q ss_pred HhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcccCC
Q 011112 408 FMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLIPKG 487 (493)
Q Consensus 408 ~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 487 (493)
......+++|.+|++.||...+..+....+|..++ .+.+...+... .+++..+.+..+.+++-.+...++||+
T Consensus 160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~------~~Wr~~~~~~~i~~~~~~~~~~~~pes 232 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVY------AGWRIPLGLALIPAVILALGMLFLPES 232 (513)
T ss_pred hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCC------ccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 44455689999999999999888887777666666 23332222110 123344444444444444445677765
Q ss_pred C
Q 011112 488 A 488 (493)
Q Consensus 488 ~ 488 (493)
-
T Consensus 233 p 233 (513)
T KOG0254|consen 233 P 233 (513)
T ss_pred h
Confidence 3
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.46 E-value=0.00098 Score=71.45 Aligned_cols=127 Identities=17% Similarity=0.120 Sum_probs=77.8
Q ss_pred eeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehh
Q 011112 318 QTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGS 397 (493)
Q Consensus 318 ~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~ 397 (493)
+.+++|+|..+.+.+..++.... ...++.|++.||+|+|+++.++.++..++.+........ .. .++.+......
T Consensus 53 L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~---~i-~~s~~~l~l~r 127 (591)
T PTZ00207 53 MQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE---VI-EGSVVRLSVYN 127 (591)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc---cc-cCcHHHHHHHH
Confidence 45669999999888755544333 345568999999999999999999888875432211110 00 01111111111
Q ss_pred HHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhh-hHhHHHHhH
Q 011112 398 ALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTV-GSFFGAGLA 450 (493)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~-~~~i~g~l~ 450 (493)
.+.....++...+....+.+..| ++||++.|+..+...+|..+ ++...+.+.
T Consensus 128 ~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 128 GLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222222333344556777776 68899999999999999875 455555443
No 249
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.44 E-value=0.00081 Score=68.49 Aligned_cols=110 Identities=11% Similarity=0.097 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHhhc--ccc---hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHH
Q 011112 82 YLVISTVLSLVPWLILGLN--AFF---RSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMA 156 (493)
Q Consensus 82 ~ii~~~~l~~~~~~~~~~~--~~~---~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~ 156 (493)
.++++.++.+++.+++.++ +.. ......+.+...+.++|.|..-+....+..|..++++.++|.+...+++.+.+
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in 82 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHh
Confidence 4667778888887774332 211 11234567777888999999999999999999987546888899999999999
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Q 011112 157 FGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLL 191 (493)
Q Consensus 157 ~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i 191 (493)
+|..++..+.+++.++.||.+.|.+.++..++..+
T Consensus 83 ~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 83 IGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHH
T ss_pred hhhHhhcccchhhccccchhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999988765444443
No 250
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.29 E-value=0.00048 Score=70.78 Aligned_cols=149 Identities=17% Similarity=0.175 Sum_probs=91.2
Q ss_pred CCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHH
Q 011112 322 LNLEASFLGTA-RVVGWVGLMLGTYTYNGYLKRL-KLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSAL 399 (493)
Q Consensus 322 ~g~s~~~~gl~-~~~~~~~~~l~~~~~~~~~~~~-~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~ 399 (493)
+|+|++++.-+ ....+..- +...++|++.||. |+|+.+..+.+++.++-++. .... .. ....++++...+
T Consensus 56 Lg~~~~~A~~l~~~y~slVY-~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L-~~~~----~~--~~~gl~i~L~~I 127 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVY-LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVL-AISS----VS--GPGGLYIGLALI 127 (498)
T ss_pred CCcChHhhHHHHHHHHHHHH-HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-hccc----cc--cccHHHHHHHHH
Confidence 55888765443 33333333 3456778888885 99999999999998875332 1110 00 011122222222
Q ss_pred HHHHH-HhhHhHHHHHHhhcCCCC--chHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhh
Q 011112 400 VDAVN-QFKFMPFLILSGQLCPPG--IEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFI 476 (493)
Q Consensus 400 ~~~~~-~~~~~~~~~~~~~~~p~~--~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 476 (493)
.++ +..=.....+..+++|++ .|-.+++++....|+|+.++|.+.+++.+.+|+ ...+.+++.-..+
T Consensus 128 --~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~--------~~gF~~aavGm~~ 197 (498)
T COG3104 128 --IVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGW--------HVGFGLAAVGMII 197 (498)
T ss_pred --HhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCH--------HHHHHHHHHHHHH
Confidence 232 211112245677777643 255678888888999999999999999998763 4567777777777
Q ss_pred hhhhhhcccCCC
Q 011112 477 PIAFLFLIPKGA 488 (493)
Q Consensus 477 ~~~~~~~l~~~~ 488 (493)
+++..++.||+-
T Consensus 198 gl~~f~~~~r~~ 209 (498)
T COG3104 198 GLVIFLLGRRHV 209 (498)
T ss_pred HHHHHHHccchh
Confidence 777666666543
No 251
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.29 E-value=0.0012 Score=50.85 Aligned_cols=65 Identities=29% Similarity=0.359 Sum_probs=43.8
Q ss_pred HHHHHH-HhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHH
Q 011112 17 CLIYFT-QGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVIS 86 (493)
Q Consensus 17 ~~~~f~-~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~ 86 (493)
-..||+ .+..+.....++.+++ +.|.|..|+|.+.++..+.-.+ .|+||.++||+ .++|..+..+
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~----~~~~~~l~~~ 72 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF----GKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CccHHHHHHH
Confidence 344544 2333334455566766 4999999999998887776666 78999999996 3445444443
No 252
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.27 E-value=0.0022 Score=65.02 Aligned_cols=164 Identities=13% Similarity=0.052 Sum_probs=97.9
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHH
Q 011112 321 ILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALV 400 (493)
Q Consensus 321 ~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~ 400 (493)
.+| +.+..-+...+..+..+..++.+-|+.||.|.|.....+.....++..+-+... ++. ++ ..++-......
T Consensus 74 ~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss--~p~---v~-~~f~~~l~~~G 146 (480)
T KOG2563|consen 74 FYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISS--LPF---VP-PLFRRPLTHTG 146 (480)
T ss_pred Hhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc--Ccc---cc-ccchhhhhHHh
Confidence 356 544555667777777778788889999999999999999999988765543322 111 11 12221122222
Q ss_pred HHHHHhhHhHHH----HHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccc-hHHHHHHHHhhhh
Q 011112 401 DAVNQFKFMPFL----ILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDN-LLLGISIQALCTF 475 (493)
Q Consensus 401 ~~~~~~~~~~~~----~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~-~~~~~~~~~~~~~ 475 (493)
+.+...+.+-.+ -...-..|+++|+++..+-...+.+|.+++-.+...+..+-.-. .+... ...++.......+
T Consensus 147 q~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~-~~~~~~~~~~f~~~~~l~~ 225 (480)
T KOG2563|consen 147 QSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDS-EDNSWLFFTLFLGVECLAA 225 (480)
T ss_pred HHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCc-chhHHHHHHHHHHHHHHHH
Confidence 322222111111 12445689999999999988888899888888888777643111 11111 1123444555555
Q ss_pred hhhhhhhcccCCCCCCC
Q 011112 476 IPIAFLFLIPKGATGVP 492 (493)
Q Consensus 476 ~~~~~~~~l~~~~~~~~ 492 (493)
+++++.....+++.+.|
T Consensus 226 l~l~l~~~~~~~~P~tP 242 (480)
T KOG2563|consen 226 LLLALVLFVFTKKPPTP 242 (480)
T ss_pred HHHHHHHHhcCCCCCCC
Confidence 55555556666666666
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.23 E-value=0.0019 Score=50.28 Aligned_cols=73 Identities=14% Similarity=0.216 Sum_probs=60.9
Q ss_pred hHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhh-hhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcc
Q 011112 24 GFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIK-PLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNA 101 (493)
Q Consensus 24 g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~-~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~ 101 (493)
|+..+.++++.|.+.+|.++|.++.|++.+...++|.++ .....+.++ .++++.+..+.+...++.+.+++.+
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-----SRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445577888999999999999999999999999999984 566777765 3567788899999999998888875
No 254
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.17 E-value=1.4e-05 Score=83.43 Aligned_cols=151 Identities=16% Similarity=0.192 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHH
Q 011112 325 EASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVN 404 (493)
Q Consensus 325 s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 404 (493)
+....++......++.++|+++.+++.||+|||+.+.++.++..++.++... .. . ..+.......-.+.++..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~-~~-~-----~~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAF-AP-S-----YNNFWMLLIGRFLIGFGI 116 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccc-cc-c-----cccccccccccccccccc
Confidence 3445677778888999999999999999999999999998887776543211 10 0 002222221212222222
Q ss_pred HhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhhcc
Q 011112 405 QFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLFLI 484 (493)
Q Consensus 405 ~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (493)
+........++.|.+|++.|+...++.+....+|..++..++-.+.+..+ ...+...+.+..+.+++.++...++
T Consensus 117 g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-----~~~Wr~~~~~~~~~~l~~~~~~~~~ 191 (451)
T PF00083_consen 117 GGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD-----NWGWRILLIFGAIPSLLVLLLRFFL 191 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccccccccccccc
Confidence 33334445689999999999998888777776666666555433322111 1123333444455554444445677
Q ss_pred cCC
Q 011112 485 PKG 487 (493)
Q Consensus 485 ~~~ 487 (493)
||.
T Consensus 192 pES 194 (451)
T PF00083_consen 192 PES 194 (451)
T ss_pred ccc
Confidence 765
No 255
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.11 E-value=0.014 Score=55.38 Aligned_cols=149 Identities=13% Similarity=0.082 Sum_probs=78.6
Q ss_pred HHHHHhHHHhHHHHHHHHHHhhhCCCHhhHHHHHHHHHh-hHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHH
Q 011112 19 IYFTQGFRSFVWTAVSYQLKDKLKFSPSASQFVSAVAFF-PWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLIL 97 (493)
Q Consensus 19 ~~f~~g~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l-~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~ 97 (493)
.|++.-.......+-..++-+.+|.-..++|.+.-.-+- .+.++.+.|.++|+. +||+--+.-++.+++++
T Consensus 45 VyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-----GRKracvtycitYiLsC--- 116 (454)
T KOG4332|consen 45 VYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRACVTYCITYILSC--- 116 (454)
T ss_pred HHHHHHhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-----ccccceeeehHHHHHHH---
Confidence 344332233445555556666788888888874322211 223477899999984 45544333333333332
Q ss_pred hhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHH----HHHH----HHHHHHHHHHh
Q 011112 98 GLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLA----MAFG----GICGSLLGGYA 169 (493)
Q Consensus 98 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~----~~~G----~~lg~~i~g~l 169 (493)
.+ .++..+-.+.+.|.+.|+..+.....-.+. +..+ ..++|+.-.-+.... ..+| .++..+.|-.+
T Consensus 117 -iT-KhSpqYkVLmVGR~LGGiaTsLLFSaFEsW---liaE-Hnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~l 190 (454)
T KOG4332|consen 117 -IT-KHSPQYKVLMVGRVLGGIATSLLFSAFESW---LIAE-HNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLL 190 (454)
T ss_pred -Hh-hcCCceEEEeehhhhhhHHHHHHHHHHHHH---HHHH-hhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 22 222356678899999999888776555444 3332 225666544443221 1122 23344444455
Q ss_pred hccc--cHHHHHHH
Q 011112 170 LTNI--EIDRIFLL 181 (493)
Q Consensus 170 ~~~~--gw~~~f~~ 181 (493)
.+++ |.-.+|-.
T Consensus 191 vd~~slGPVAPFdA 204 (454)
T KOG4332|consen 191 VDTFSLGPVAPFDA 204 (454)
T ss_pred HHHhccCCCCchHH
Confidence 5544 33445543
No 256
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.01 E-value=0.21 Score=52.58 Aligned_cols=153 Identities=16% Similarity=0.192 Sum_probs=83.9
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh--hhhhhhcccccccCCCCchhHHHH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI--KPLYGILSDCIPIKGRKRIPYLVI 85 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~--~~~~G~lsDr~~~~g~~rr~~ii~ 85 (493)
-++.++.+.+.+|+..+.+ +....=+..+.... .++.+.++-.+..+|.++ -.+...++|++ .|.+..-.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-----s~~~lFy~ 94 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRL-----SREKLFYI 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CHHHHHHH
Confidence 3566666778888877774 44332111111112 456667766667778765 45789999986 33334333
Q ss_pred HHHHHHHHHHHHhh--cccc----hh---------------------hHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHhh
Q 011112 86 STVLSLVPWLILGL--NAFF----RS---------------------STWHLIVLLTAQN-LGSAMADVVVDAMIAEAAK 137 (493)
Q Consensus 86 ~~~l~~~~~~~~~~--~~~~----~~---------------------~~~~l~~~~~l~~-~~~~~~~~~~~ali~~~~~ 137 (493)
....+.....++++ .|.. ++ ..|...+..+..- .|.-.....-.+++.|.++
T Consensus 95 ~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt 174 (491)
T PF03219_consen 95 IIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT 174 (491)
T ss_pred HHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33333333333332 2210 00 0011111111111 1222222234667777774
Q ss_pred hhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011112 138 SERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT 171 (493)
Q Consensus 138 ~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~ 171 (493)
.+|..|..+++..+.++|.+++..+..++.+
T Consensus 175 ---~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 175 ---VEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888899999999999999998888777766
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.94 E-value=0.019 Score=57.07 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=78.9
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHH
Q 011112 320 EILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSAL 399 (493)
Q Consensus 320 ~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~ 399 (493)
+.+|+++.+++.+.+.+.+..++.+.+.|.+.||+|+|+.-+...++..++.+.- . .++....+..-.+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k---~--------~~~~~~L~~GRvl 130 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK---H--------SSNYPVLLLGRVL 130 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH---h--------ccccHHHHHHHHH
Confidence 4589999999999999999999999999999999999998888878777765321 1 1222211111122
Q ss_pred HHHHHHhhHhHH-HHH----HhhcCCCCchHHHHHHHHHH-HhhhhhhhHhHHHHhHHhhcC
Q 011112 400 VDAVNQFKFMPF-LIL----SGQLCPPGIEGTLFALFMSI-SNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 400 ~~~~~~~~~~~~-~~~----~~~~~p~~~~gt~~gl~~~~-~~lg~~~~~~i~g~l~~~~g~ 455 (493)
.+......+.+. .-+ -.+-.|++..+..++...+. +.+....++.++-.+.+..|.
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~ 192 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF 192 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC
Confidence 222222222221 112 33446777778888877744 334556667777777776654
No 258
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.89 E-value=0.01 Score=56.59 Aligned_cols=155 Identities=16% Similarity=0.126 Sum_probs=90.6
Q ss_pred eeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeeh-
Q 011112 318 QTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYG- 396 (493)
Q Consensus 318 ~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~- 396 (493)
+++.+|+|..+...+.....+|.-+| ++.|.+.|+.|.+..+.++.+...++... .++.... . ++....+..+
T Consensus 28 Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~-~~l~~~~--~--i~~~~~~~~~~ 101 (250)
T PF06813_consen 28 LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGL-LWLAVSG--R--IPSLPVWLMCL 101 (250)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHhC--c--cCccchHHHHH
Confidence 44569999999999988888888775 77899999999999999999888876543 2322211 1 1211222111
Q ss_pred -hHHHHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHH-HHhhh
Q 011112 397 -SALVDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISI-QALCT 474 (493)
Q Consensus 397 -~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~-~~~~~ 474 (493)
.++......+...+......+-.| ++||++.|+.-+...+++.+=..+... .++ +|.+.+..+..+ ...++
T Consensus 102 ~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~---~f~---~~~~~fll~la~~~~~v~ 174 (250)
T PF06813_consen 102 FLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSA---FFG---DDPSSFLLFLAVLPAVVC 174 (250)
T ss_pred HHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHH---HcC---CChHHHHHHHHHHHHHHH
Confidence 111111112222333334556676 589999999998887776443332221 222 123333333333 44555
Q ss_pred hhhhhhhhccc
Q 011112 475 FIPIAFLFLIP 485 (493)
Q Consensus 475 ~~~~~~~~~l~ 485 (493)
++.+.++...|
T Consensus 175 l~~~~~vr~~~ 185 (250)
T PF06813_consen 175 LVAMFFVRPVP 185 (250)
T ss_pred HHHhhheeccC
Confidence 66666665555
No 259
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.87 E-value=0.0011 Score=65.57 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=79.6
Q ss_pred hhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchh
Q 011112 63 PLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAA 142 (493)
Q Consensus 63 ~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~ 142 (493)
.+.+++.||+ +||+.+.++.++++++.+.+....+......+++..|++. ....-+.+.+..|+. |..
T Consensus 399 LIt~~iverl-----GRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVy---PTa 466 (528)
T KOG0253|consen 399 LITGVIVERL-----GRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVY---PTA 466 (528)
T ss_pred hHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCccc---chh
Confidence 4689999995 7889999999999988877766543211222233344332 222234456778888 458
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhhccc-ccc
Q 011112 143 FAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAIQLLSCGLVK-ENR 200 (493)
Q Consensus 143 ~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l~~i~~~~~~-e~~ 200 (493)
.|+...|....+.-+|+++.|+++-....+. ..+..+.+.+.++..+...++| |++
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA~~~e~s~--sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIAMRAELST--SLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHHHHhccce--eehHHHHHHHHHHHHHHheeeeeccC
Confidence 9999999999999999999999993222232 2233344545555555555555 443
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.68 E-value=0.0087 Score=62.14 Aligned_cols=179 Identities=15% Similarity=0.094 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHhcccCCCcceeeee-eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHh
Q 011112 294 LRPMAWFFLAHVAVPNLSTVMFYYQ-TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKL-RRILLLTQVGLSILS 371 (493)
Q Consensus 294 ~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~-r~~l~~~~~~~~~~~ 371 (493)
+...+..|+...........+..|+ ..+.+-+.+..|++.....++-.+++++++....|.+. |+.++.+.+++.++.
T Consensus 37 ~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~ 116 (488)
T KOG2325|consen 37 YLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGN 116 (488)
T ss_pred HHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHH
Confidence 3344444554444444444444444 33578888899999888999999999999999988775 888888888888887
Q ss_pred hhhhhheeccccccCccCceEeeehhHHHHHHHHh---hHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHH
Q 011112 372 FLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQF---KFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAG 448 (493)
Q Consensus 372 l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~ 448 (493)
++.+.+.+..+ ...++.+ +.-++.++ .....-+|++...-++.|.++++..+...-+|..+||.++..
T Consensus 117 llY~~l~~~~~-----~~~y~mL----~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 117 LLYLALAYVPN-----GVKYLML----VARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHhccc-----chHHHHH----HHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 66544333211 1122211 12222222 222334677777777888888888777677777777777665
Q ss_pred hHHhh--cC--CC-CCccchHHHHHHHHhhhhhhhhhh
Q 011112 449 LASSL--SI--SS-GSFDNLLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 449 l~~~~--g~--~~-~~~~~~~~~~~~~~~~~~~~~~~~ 481 (493)
+.... |+ .. -.++.+.....+.++++++.++.+
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i 225 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVII 225 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHH
Confidence 55421 11 11 233444444445555555554443
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.66 E-value=0.006 Score=46.87 Aligned_cols=56 Identities=16% Similarity=0.190 Sum_probs=45.8
Q ss_pred CcceeeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 011112 311 STVMFYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGL 367 (493)
Q Consensus 311 ~~~~~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~ 367 (493)
.+..+.|+. +.|+|+.+.|++..+..+..+++.+++|.+.||.++++.+.....++
T Consensus 20 ~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 20 YPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 333445554 48999999999999999999999999999999999999887765543
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.65 E-value=0.1 Score=45.95 Aligned_cols=102 Identities=9% Similarity=0.077 Sum_probs=74.1
Q ss_pred HhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 011112 56 FFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAE 134 (493)
Q Consensus 56 ~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~ 134 (493)
.....+ +++...+.+++ +.|+.++++.+..++-..... .+ +.+.++..-.+.|++.+...+.--.++.+
T Consensus 47 Y~~~~~s~l~~P~iv~~l-----g~K~sm~lg~~~y~~y~~~~~-~~----~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNKL-----GPKWSMILGSLGYAIYIASFF-YP----NSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHhHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHH-hh----hHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 334444 56667777774 678888888887776554432 22 34566777788999999999888888887
Q ss_pred HhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011112 135 AAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYAL 170 (493)
Q Consensus 135 ~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~ 170 (493)
..+ ++++++-.++++.....+.++|.++.-.+.
T Consensus 117 ~s~---~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 117 YST---EETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred cCC---HHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 764 478888999999998888888877765543
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.44 E-value=1.4 Score=45.72 Aligned_cols=150 Identities=13% Similarity=0.169 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCC---HhhHHHHHHHHHhhHhh--hhhhhhcccccccCCCCchhHH
Q 011112 10 VSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFS---PSASQFVSAVAFFPWSI--KPLYGILSDCIPIKGRKRIPYL 83 (493)
Q Consensus 10 ~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s---~~~~g~~~s~~~l~~~~--~~~~G~lsDr~~~~g~~rr~~i 83 (493)
++.++.+.+..++.++.+ +.. .++|.+.++ ++.+.++-++..+|.++ .++.+++++++ .|.+.+
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-----t~~~vF 95 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-----TREKVF 95 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-----CHHHHH
Confidence 444554666666666654 332 346666655 45567777777787764 67899999985 344444
Q ss_pred HHHHHHHHHHHHHHhhc--c-------cc----------h-h--------hHHHHHHHHHHHHhhhhhH-HHHHHHHHHH
Q 011112 84 VISTVLSLVPWLILGLN--A-------FF----------R-S--------STWHLIVLLTAQNLGSAMA-DVVVDAMIAE 134 (493)
Q Consensus 84 i~~~~l~~~~~~~~~~~--~-------~~----------~-~--------~~~~l~~~~~l~~~~~~~~-~~~~~ali~~ 134 (493)
-.....+....+++++. | +. + . +.|...+...+.-+=.+.+ .-.-.....|
T Consensus 96 ~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNe 175 (509)
T COG3202 96 YIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANE 175 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444432 2 10 0 0 1123333333332222222 2245677778
Q ss_pred HhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011112 135 AAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTN 172 (493)
Q Consensus 135 ~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~ 172 (493)
+++. +|..|..+++....+++..++..+..++..+
T Consensus 176 itt~---~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 176 ITTI---EEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred hhhH---HHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 7754 8888999999999999999998888888763
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.04 E-value=2.3 Score=44.25 Aligned_cols=115 Identities=12% Similarity=-0.017 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccc-cc--CccCceEeeehhHHHHHHHHhhHh
Q 011112 333 RVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNL-TV--GISDKTMVLYGSALVDAVNQFKFM 409 (493)
Q Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~-~~--g~~~~~~~l~~~~~~~~~~~~~~~ 409 (493)
....+++-.+|..+..+..-...+.+.+.+..+...+...+ +.+....+. .. ..++.++.+....+.+..++....
T Consensus 313 ~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPl-f~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s 391 (437)
T TIGR00939 313 FLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPL-FLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLGS 391 (437)
T ss_pred HHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHH-HHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHHH
Confidence 56677777777765543211111112454555555543211 112111100 00 012222222223334444544333
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHH
Q 011112 410 PFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAG 448 (493)
Q Consensus 410 ~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~ 448 (493)
-.+.+..+..++++|-.+-.+++..-.+|-..|+.++-.
T Consensus 392 ~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 392 LSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567777888888888888877777777777765433
No 265
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.99 E-value=0.0045 Score=62.98 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=93.2
Q ss_pred hhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHH----HHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 011112 63 PLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLI----VLLTAQNLGSAMADVVVDAMIAEAAKS 138 (493)
Q Consensus 63 ~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~----~~~~l~~~~~~~~~~~~~ali~~~~~~ 138 (493)
++...++|++ +||+..+.+.++.++..+.++...++..+...++ +..++..+|-... .-.+-+|.+
T Consensus 366 w~tv~~id~i-----GRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~t---tfivpaE~F-- 435 (538)
T KOG0252|consen 366 WFTVYFIDII-----GRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNAT---TFIVPAEIF-- 435 (538)
T ss_pred eEEEEEeehh-----hhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCce---eEEeehhhc--
Confidence 3568899984 7888888888888888888887765211222223 3334444443222 112335666
Q ss_pred hchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc-----cccHHHHHHHHHHHHHHHHHHhhccccccccc
Q 011112 139 ERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT-----NIEIDRIFLLFTVLPAIQLLSCGLVKENRVST 203 (493)
Q Consensus 139 ~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~-----~~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~~ 203 (493)
|.+-||..-|+.....=+|.++|...-+++.+ ..+.|++|++.+.+..+..+..+++||++...
T Consensus 436 -ParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~ 504 (538)
T KOG0252|consen 436 -PARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKS 504 (538)
T ss_pred -hHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccC
Confidence 56999999999999999999999999999988 67889999998877766667778889887544
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.99 E-value=0.044 Score=57.02 Aligned_cols=133 Identities=17% Similarity=0.167 Sum_probs=71.0
Q ss_pred eeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----hhHHHH-HHHHHHHHHhhhhhhheeccccccCccC
Q 011112 315 FYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLK----LRRILL-LTQVGLSILSFLDIVLVSRMNLTVGISD 389 (493)
Q Consensus 315 ~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~----~r~~l~-~~~~~~~~~~l~~~~~~~~~~~~~g~~~ 389 (493)
.+|+++++|+|+.+...+.....+.-.+ .+++|.+.|-++ +||..+ ++.++..++ ...+....... ..
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~-~~~~~~~~~~~-----~s 85 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVS-ALVLALLPASE-----SS 85 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHH-HHHHHhccccc-----ch
Confidence 4566788999998887765544443333 466788888664 444444 344433222 22222221100 11
Q ss_pred ceEeeehhHHHHHHHHhhHhHHHHHHhhcC---CCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcC
Q 011112 390 KTMVLYGSALVDAVNQFKFMPFLILSGQLC---PPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSI 455 (493)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~ 455 (493)
........++......+.-+..=++..|.. |++ +|...+.......+|+.++..++|.+.+..+.
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~ 153 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP 153 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC
Confidence 111111111111111122222223444444 443 78888888889999999999999998887654
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.95 E-value=0.059 Score=58.88 Aligned_cols=161 Identities=13% Similarity=0.047 Sum_probs=87.9
Q ss_pred eeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCce-Ee
Q 011112 316 YYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLK-RLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKT-MV 393 (493)
Q Consensus 316 ~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~-~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~-~~ 393 (493)
.|+.+.+|++......+........-+...+++.+.| ++|+++.+..+.++..++..+. .... .+......... .+
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~ll-ai~a-~~~~~~~~~~~~~l 89 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALL-SFGA-IPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hhcc-CcccccchHHHHHH
Confidence 3444558888776665533333333333455566666 5688999998888877754322 1111 10000000000 11
Q ss_pred eehhHHHHHHHHhhHhH-HHHHHhhcCCCC---chHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHH
Q 011112 394 LYGSALVDAVNQFKFMP-FLILSGQLCPPG---IEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISI 469 (493)
Q Consensus 394 l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~---~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 469 (493)
++..+ ...+.-..-| ..++..+..+++ .+-+.+.++....|+|+.++..+.+.+.+.++-. +.+.+++..+.+
T Consensus 90 ~gLaL--ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f-g~~~~~~~aF~i 166 (654)
T TIGR00926 90 LGLAL--IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF-GCQDCYPLAFGV 166 (654)
T ss_pred HHHHH--HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccCcchHHHHHH
Confidence 11111 1222111222 245566666543 4667888888899999888888888887543210 123457778888
Q ss_pred HHhhhhhhhhhh
Q 011112 470 QALCTFIPIAFL 481 (493)
Q Consensus 470 ~~~~~~~~~~~~ 481 (493)
.+++.+++++..
T Consensus 167 ~~i~m~ia~lvf 178 (654)
T TIGR00926 167 PAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHH
Confidence 888777776553
No 268
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=95.86 E-value=0.11 Score=51.31 Aligned_cols=123 Identities=15% Similarity=0.202 Sum_probs=70.9
Q ss_pred hcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchh
Q 011112 67 ILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGD 146 (493)
Q Consensus 67 ~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~ 146 (493)
.+.|-. |-||.++.-.+.....+..+-+.++ .+..=++-+.-|... .+.+++.+++=+.. +++++.+
T Consensus 64 lLTD~l-----rYKPvivlq~ls~v~~w~~lv~g~s----V~~mQvlE~FyG~~t-AaEIAYysYIYs~V---d~~~Yqr 130 (433)
T KOG3810|consen 64 LLTDYL-----RYKPVVVLQALSGVPVWIMLVFGPS----VKAMQVLEFFYGPAT-AAEIAYYSYIYSKV---DPEMYKR 130 (433)
T ss_pred HHhhhh-----hcceeeeeeccchhHHHHHHHhcCC----chheeeehhhcChHH-HHHHhhhheeeeec---CHHHHHH
Confidence 577863 6788888777666666665555442 222112222223222 33455555554443 6789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHhhcccccccc
Q 011112 147 LQSLSWLAMAFGGICGSLLGGYALTN--IEIDRIFLLFTVLPAIQLLSCGLVKENRVS 202 (493)
Q Consensus 147 ~~g~~~~~~~~G~~lg~~i~g~l~~~--~gw~~~f~~~~~~~~l~~i~~~~~~e~~~~ 202 (493)
+.|....+.-.|-.+|...+-.+.+- .+++..=++.-....+..+..+++|.+++.
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rS 188 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRS 188 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchh
Confidence 99999999999999998888888753 334433333222222222344566655533
No 269
>PRK03612 spermidine synthase; Provisional
Probab=95.84 E-value=0.92 Score=48.35 Aligned_cols=160 Identities=17% Similarity=0.094 Sum_probs=82.4
Q ss_pred HHHHHHHHhHHHh-HHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHH---H
Q 011112 16 ICLIYFTQGFRSF-VWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVL---S 90 (493)
Q Consensus 16 ~~~~~f~~g~~~~-~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l---~ 90 (493)
+....|+.|+.++ .-....-++.-.+|-+..+.+..+++++.+.++ +.+.|.+.++ ..+++...-..+ .
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~------~~~~~~~~e~~i~l~~ 92 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD------AAAGFVAVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHHHHHHH
Confidence 4455667777653 223333445556898999999999999999888 3455555532 122222221111 1
Q ss_pred HHHHHHHhhcccchhhH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 91 LVPWLILGLNAFFRSST-WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~-~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
.++..++.......... .......++.++..|...|....+..+. ..++-|+..|..+..-++|+++|.++.+++
T Consensus 93 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~----~~~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 93 GLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRI----RDQHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cccchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 11111111110000011 1111222234455555544433333221 112356778888999999999999998866
Q ss_pred h-ccccHHHHHHHHHHH
Q 011112 170 L-TNIEIDRIFLLFTVL 185 (493)
Q Consensus 170 ~-~~~gw~~~f~~~~~~ 185 (493)
. +.+|-....++.+.+
T Consensus 169 Llp~lG~~~t~~~~a~l 185 (521)
T PRK03612 169 LLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHhcchHHHHHHHHHH
Confidence 5 466654444444433
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.92 E-value=0.19 Score=44.25 Aligned_cols=104 Identities=12% Similarity=0.059 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLILS 415 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 415 (493)
......+++++..-+.++.|.|+.++++.++..+-.... + . ++.+..+..+.+.++.....+.+...++
T Consensus 46 ~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~--~-~--------~~~~~l~~~s~l~G~~~a~lW~aqg~yl 114 (156)
T PF05978_consen 46 LYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF--F-Y--------PNSYTLYPASALLGFGAALLWTAQGTYL 114 (156)
T ss_pred HHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH--H-h--------hhHHHHHHHHHHHhhhhHHhhHhhhHHH
Confidence 333445555666677788999999999988876532111 1 1 2223333334445555556666666788
Q ss_pred hhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhH
Q 011112 416 GQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLA 450 (493)
Q Consensus 416 ~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~ 450 (493)
.+..+++.+++..+++-.+.+.+..+|+.+.-.+.
T Consensus 115 t~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 115 TSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888877655444
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.89 E-value=0.85 Score=47.82 Aligned_cols=127 Identities=9% Similarity=-0.039 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccccc-----------CccC---
Q 011112 325 EASFLGTARVVGWVGL-MLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTV-----------GISD--- 389 (493)
Q Consensus 325 s~~~~gl~~~~~~~~~-~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~-----------g~~~--- 389 (493)
+++....+.....+.+ ++..++++++.+|.++++.+...........++............ ..+.
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3455666655444433 344788999999999999887765554443222111111100000 0000
Q ss_pred -------ceEeeehhHHHHHHHHhhHh-HHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHH
Q 011112 390 -------KTMVLYGSALVDAVNQFKFM-PFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLAS 451 (493)
Q Consensus 390 -------~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~ 451 (493)
.|............+.+... -.+.+++|.+.+++..+.++++...+|+|..+|+.+...+.+
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011112222222222 346789999999999999999999999999999888777764
No 272
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.46 E-value=0.29 Score=52.57 Aligned_cols=156 Identities=18% Similarity=0.036 Sum_probs=104.8
Q ss_pred HHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhh-hhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhccc-------
Q 011112 31 TAVSYQLKDKLKFSPSASQFVSAVAFFPWSIK-PLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAF------- 102 (493)
Q Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~-~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~------- 102 (493)
..+..|+.+++|.+...+.-..+.+.-.-..- .+.+.++|.+ .+|=+.+.++.++..++..++.+...
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f----~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~ 133 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSF----LGRYFTINIGSLISLLGLFGLTLSAMIPALLPF 133 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Confidence 34456778889988866655555554333333 5789999986 46666777777766666444332210
Q ss_pred ------c-----h-h--hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh-c--hhcchhHHHHHHHHHHHHHHHHHHH
Q 011112 103 ------F-----R-S--STWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSE-R--AAFAGDLQSLSWLAMAFGGICGSLL 165 (493)
Q Consensus 103 ------~-----~-~--~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~-~--~~~rg~~~g~~~~~~~~G~~lg~~i 165 (493)
. + . ....+...+-+.++|.+..-+...+.-+|..++. | ...+.+.+.+++...++|..++..+
T Consensus 134 ~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~ 213 (571)
T KOG1237|consen 134 MCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTV 213 (571)
T ss_pred cccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHH
Confidence 0 0 1 1122334444566788888888888888888632 2 2334478899999999999999999
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHH
Q 011112 166 GGYALTNIEIDRIFLLFTVLPAIQL 190 (493)
Q Consensus 166 ~g~l~~~~gw~~~f~~~~~~~~l~~ 190 (493)
..++.+..+|.+.|-+..+...+..
T Consensus 214 ~vyiq~~~~w~lgf~i~~~~~~lai 238 (571)
T KOG1237|consen 214 LVYIQDNVGWKLGFGIPTVLNALAI 238 (571)
T ss_pred HHhhhhcccceeeccHHHHHHHHHH
Confidence 9999999999999888776554444
No 273
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.27 E-value=0.17 Score=52.89 Aligned_cols=131 Identities=13% Similarity=0.135 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHhhHhHHHHH
Q 011112 335 VGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQFKFMPFLIL 414 (493)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 414 (493)
..++..++.++..|.+.|++|+|..+....+...+..+.... . ..++.+........ ...+...+++
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~-~----------~~~~~~~~~l~g~~--~~~~s~~~a~ 136 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF-Q----------GYWFFLLLGLSGGF--SAIFSVGFAY 136 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH-H----------HHHHhhhcccccch--hhhhhhhhhh
Confidence 456677788889999999999999888877666554322111 1 11111100000000 1112234567
Q ss_pred HhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhh-hcccC
Q 011112 415 SGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFL-FLIPK 486 (493)
Q Consensus 415 ~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 486 (493)
+++.+..+.|...+|+.+.....+..++|.+++.+...+|+.. .+.+.....++...+. ..+||
T Consensus 137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~--------~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIAL--------VFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHHHHhhcccc
Confidence 8899999999999999999999999999999999999876532 3444444455554443 35554
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.00 E-value=11 Score=38.63 Aligned_cols=32 Identities=13% Similarity=-0.179 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 011112 336 GWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSI 369 (493)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~ 369 (493)
.++...+|.....++.. +.+|.+.+..+...+
T Consensus 292 fN~~d~vG~~~a~~~~~--~~~r~l~i~v~lR~l 323 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTW--PDPRKLTIPVLLRLL 323 (406)
T ss_pred hHHHHHhhhhhhhcccC--CCCceehHHHHHHHH
Confidence 67788888776665433 334445555555544
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.71 E-value=6.6 Score=40.95 Aligned_cols=155 Identities=17% Similarity=0.162 Sum_probs=83.6
Q ss_pred hhchhHHHHHHHHHHHHhHH-HhHHHHHHH--HHHhhhCCCHhhHHHHHHH-HHhhHhh-hhhhhhcccccccCCCCchh
Q 011112 7 VFGVSFLWLICLIYFTQGFR-SFVWTAVSY--QLKDKLKFSPSASQFVSAV-AFFPWSI-KPLYGILSDCIPIKGRKRIP 81 (493)
Q Consensus 7 ~~~~~~~~~~~~~~f~~g~~-~~~~~~~~~--~l~~~~g~s~~~~g~~~s~-~~l~~~~-~~~~G~lsDr~~~~g~~rr~ 81 (493)
.+..+.++.+...++.+|+. ++.....+. ...+..+.+...+-.+.++ ...+..+ +..++.+++|.+ +.+|++
T Consensus 236 l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir--~fg~~~ 313 (461)
T KOG3098|consen 236 LLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIR--GFGRKP 313 (461)
T ss_pred HhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhh--hcccCc
Confidence 34455555566777778875 322111111 1122344444433222222 2233444 578899999864 567888
Q ss_pred HHHHHHHHHHHHHHHHhhccc--c------------hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhH
Q 011112 82 YLVISTVLSLVPWLILGLNAF--F------------RSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDL 147 (493)
Q Consensus 82 ~ii~~~~l~~~~~~~~~~~~~--~------------~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~ 147 (493)
.+..+..+..+..++..+... . ..++....+.-++.|++-+......+.++.++. +++|..+
T Consensus 314 ~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~----~~~~~~~ 389 (461)
T KOG3098|consen 314 TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY----PDDRAQA 389 (461)
T ss_pred chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh----cCchHHH
Confidence 888887776666555433211 1 012323334444556655555555555555655 3667777
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 011112 148 QSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 148 ~g~~~~~~~~G~~lg~~i~g 167 (493)
.+++..-+.++..++.....
T Consensus 390 fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 390 FSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHHHHHHhhhhh
Confidence 77777777777766544443
No 276
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.21 E-value=4.1 Score=41.70 Aligned_cols=146 Identities=18% Similarity=0.126 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHhHHHhHHHHHHHHH--HhhhCCCHhhHHHHHHHHHhhHhhh-hhhhhcccccccCCCCchhHHHHHHH
Q 011112 12 FLWLICLIYFTQGFRSFVWTAVSYQL--KDKLKFSPSASQFVSAVAFFPWSIK-PLYGILSDCIPIKGRKRIPYLVISTV 88 (493)
Q Consensus 12 ~~~~~~~~~f~~g~~~~~~~~~~~~l--~~~~g~s~~~~g~~~s~~~l~~~~~-~~~G~lsDr~~~~g~~rr~~ii~~~~ 88 (493)
..+.+.+.||.+.+. ++.+.+-+ .+++.-...+..+...++.++..++ -- ..+. | .||.+++.+-+.
T Consensus 248 ymiPL~lVY~aEY~I---nqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS-~~~~-r-----ir~lwils~LQ~ 317 (402)
T PF02487_consen 248 YMIPLFLVYFAEYFI---NQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSS-LPFF-R-----IRRLWILSLLQV 317 (402)
T ss_pred HHHHHHHHHHHHHHH---HhchHHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcc-eeee-e-----hhhHHHHHHHHH
Confidence 334456667766542 22222221 2233333455566666666554431 10 1111 2 234333333333
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 011112 89 LSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGY 168 (493)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~ 168 (493)
+..+.+++.+...- -.+.|..++..+..|+..|..++-....+.|-. ++++|..++|....+-++|..++.+++-+
T Consensus 318 ~nl~~~~l~s~~~f-ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~---~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 318 INLVFLLLQSWYRF-IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEV---PPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33333333332211 124555666666778888888877777766643 56899999999999999999999888876
Q ss_pred hhc
Q 011112 169 ALT 171 (493)
Q Consensus 169 l~~ 171 (493)
+.+
T Consensus 394 le~ 396 (402)
T PF02487_consen 394 LEP 396 (402)
T ss_pred HHH
Confidence 643
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=91.98 E-value=0.47 Score=37.02 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=46.5
Q ss_pred eeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 011112 316 YYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSIL 370 (493)
Q Consensus 316 ~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~ 370 (493)
+.+.++.++|..+.|++...+.+|-++|++...++.++.+.++.+..+.+...++
T Consensus 16 P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 16 PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 4556778999999999999999999999999998888878788888777766654
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=91.21 E-value=9.1 Score=39.30 Aligned_cols=124 Identities=12% Similarity=0.015 Sum_probs=72.4
Q ss_pred eeeeec-cCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceE
Q 011112 315 FYYQTE-ILNLEASFLGT-ARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTM 392 (493)
Q Consensus 315 ~~~~~~-~~g~s~~~~gl-~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~ 392 (493)
..|+.+ +.|++.++..- +.-+..=..+..-+....+.|..+.|.+++.+.+...+...+.++. . +..
T Consensus 27 ~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~-~--------sv~-- 95 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG-T--------SVL-- 95 (412)
T ss_pred hHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-C--------cHH--
Confidence 344444 48999887653 2211212222333344556788888999988887766654332211 0 100
Q ss_pred eeehhHHHHHHHHh---hHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHh
Q 011112 393 VLYGSALVDAVNQF---KFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASS 452 (493)
Q Consensus 393 ~l~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~ 452 (493)
..-+.++..+. .-.+..+++-...|+++--+..+...+..-+|..+|+.+|-.+.+.
T Consensus 96 ---~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 96 ---AMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11122333332 2233456777788888877787888888888888888888877763
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=90.38 E-value=0.068 Score=57.16 Aligned_cols=162 Identities=13% Similarity=0.080 Sum_probs=1.3
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccc-c-cC----------
Q 011112 319 TEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNL-T-VG---------- 386 (493)
Q Consensus 319 ~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~-~-~g---------- 386 (493)
++.++++..+.|++.....++.++..++..++.+|..+=|.+.++.++++++.++.. +-+.... . ..
T Consensus 30 ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~-lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 30 ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA-LPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh-ccHhhcCCCccccccccccccc
Confidence 445899999999999989999988888888888876666777788888877654321 1111000 0 00
Q ss_pred ----cc---------------------CceEeeehhHHHHHHHHhhHhHHH----HHHhhcCCCCchHHHHHHHHHHHhh
Q 011112 387 ----IS---------------------DKTMVLYGSALVDAVNQFKFMPFL----ILSGQLCPPGIEGTLFALFMSISNF 437 (493)
Q Consensus 387 ----~~---------------------~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~gt~~gl~~~~~~l 437 (493)
.. ..........+.+...++.-.|.+ +|+-|.++++..+.+.|++.+...+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 00 000011112233444444444543 6788889999999999999988888
Q ss_pred hhhhhHhHHHHhHHhh-cC----------C--CCCccc-hHHHHHHHHhhhhhhhhhh
Q 011112 438 GSTVGSFFGAGLASSL-SI----------S--SGSFDN-LLLGISIQALCTFIPIAFL 481 (493)
Q Consensus 438 g~~~~~~i~g~l~~~~-g~----------~--~~~~~~-~~~~~~~~~~~~~~~~~~~ 481 (493)
|-.+|=.+|+.+...+ +. + ++.|-+ +|..+++.+.+.++..+-+
T Consensus 189 GPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 189 GPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp ----------------------------------------------------------
T ss_pred cHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877888777543 11 1 123323 6677776666554443333
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=88.94 E-value=4.1 Score=38.35 Aligned_cols=118 Identities=14% Similarity=0.154 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEeeehhHHHHHHHHh
Q 011112 327 SFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVLYGSALVDAVNQF 406 (493)
Q Consensus 327 ~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 406 (493)
...+.......++..++.++.|++.||.|+|+.+..+......+.+. ...... ......+..........+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~g~~~~~ 110 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLL-LALAPN-------VGLALLLILRLLQGLGGGG 110 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHH-HHhCcc-------chHHHHHHHHHHHHhhhHH
Confidence 35666666666777777788999999998887776666542222111 111110 0011111111111222222
Q ss_pred hHhHHHHHHhhcCCC-CchHHHHHHHHH-HHhhhhhhhHhHHHHhHHh
Q 011112 407 KFMPFLILSGQLCPP-GIEGTLFALFMS-ISNFGSTVGSFFGAGLASS 452 (493)
Q Consensus 407 ~~~~~~~~~~~~~p~-~~~gt~~gl~~~-~~~lg~~~~~~i~g~l~~~ 452 (493)
......+++.+..|+ +.++...+.... ...++..+++.+++.+.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 111 LLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233345778888887 678888888888 5677888888777777765
No 281
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.71 E-value=0.69 Score=45.09 Aligned_cols=125 Identities=13% Similarity=0.131 Sum_probs=73.7
Q ss_pred HHHhhHh-hhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 011112 54 VAFFPWS-IKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMI 132 (493)
Q Consensus 54 ~~~l~~~-~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali 132 (493)
.-.+|.. +|...-.+-||+| ++.|-. +..++.+.++++.++.+ +.+.-+....++.++.+..++..-++.
T Consensus 70 aDilPsL~iKl~~Pff~~rfp---f~~Ri~--~~v~~sa~s~~lVafs~----s~~~sL~GV~~aSissGlGEiTFL~ls 140 (409)
T KOG3880|consen 70 ADILPSLAIKLTAPFFIHRFP---FGFRIA--LVVLLSALSFFLVAFSN----SVPMSLLGVVFASISSGLGEITFLALS 140 (409)
T ss_pred hhhhHHHHHHHhchhhhhhcc---cchHHH--HHHHHHhcceEEEEecc----chhHHHhhhhhhhhcCCcceeehhhhh
Confidence 3445654 4777777889875 455533 23334555555555553 455556666777888888887766665
Q ss_pred HHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHhhc
Q 011112 133 AEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALT--NIEIDRIFLLFTVLPAIQLLSCGL 195 (493)
Q Consensus 133 ~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~--~~gw~~~f~~~~~~~~l~~i~~~~ 195 (493)
+.+-+ .+.+.+..+...++++|..--..+.+ .++-|...+++-.++++.+...++
T Consensus 141 s~Y~~--------~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 141 SRYPS--------IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred ccCCC--------ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh
Confidence 44321 12233333344445555555555555 345778888888888877765543
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=87.22 E-value=10 Score=36.27 Aligned_cols=31 Identities=16% Similarity=0.118 Sum_probs=21.2
Q ss_pred CCCCchHHHHHHHHHHHhhhhhhhHhHHHHh
Q 011112 419 CPPGIEGTLFALFMSISNFGSTVGSFFGAGL 449 (493)
Q Consensus 419 ~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l 449 (493)
..|++-|..+|+.=.++++.-++.-.+-+.+
T Consensus 235 ~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i 265 (267)
T PF07672_consen 235 YNPKKIGIQFGLIWGFGYIFYTIYDIILSVI 265 (267)
T ss_pred CCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677888888887777777666665554433
No 283
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=83.81 E-value=4.5 Score=44.42 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=48.4
Q ss_pred hchhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHh-hh-hhhhhcccccccCC
Q 011112 8 FGVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWS-IK-PLYGILSDCIPIKG 76 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~-~~-~~~G~lsDr~~~~g 76 (493)
++.+......+...++.+.. -..+++|.|++.+||.+.+.++.+++...++.+ ++ .+.|.+.-|+++..
T Consensus 389 l~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 389 LSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred hcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 34444444445555544432 234677899999999999999999988888765 45 57899999875443
No 284
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=83.77 E-value=15 Score=35.38 Aligned_cols=132 Identities=14% Similarity=0.185 Sum_probs=73.7
Q ss_pred eeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheeccccccCccCceEee
Q 011112 315 FYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGISDKTMVL 394 (493)
Q Consensus 315 ~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l 394 (493)
.||+...+|+.+.++|.+.+.+...+++.+.+.+-+.||.|+|+.-+.-.+...++.+. -.+ |+....+
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT------KhS-----pqYkVLm 128 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT------KHS-----PQYKVLM 128 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh------hcC-----CceEEEe
Confidence 45555668999999999888888888888888999999999988655444444443211 111 2222122
Q ss_pred ehhHHHHHHHHhhHhHH-HHHHhhcC-----CCCchHHHHHHHHHHHh-hhhhhhHhHHHHhHHhhcCCC
Q 011112 395 YGSALVDAVNQFKFMPF-LILSGQLC-----PPGIEGTLFALFMSISN-FGSTVGSFFGAGLASSLSISS 457 (493)
Q Consensus 395 ~~~~~~~~~~~~~~~~~-~~~~~~~~-----p~~~~gt~~gl~~~~~~-lg~~~~~~i~g~l~~~~g~~~ 457 (493)
.+-.+.+..-...+.+. .-++.|.. |++--...++-..++.| +-..+++..|-.+.|.++...
T Consensus 129 VGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGP 198 (454)
T KOG4332|consen 129 VGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGP 198 (454)
T ss_pred ehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCC
Confidence 22222222222223332 23455554 33333333333332333 555667777777788776543
No 285
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=83.67 E-value=0.3 Score=50.09 Aligned_cols=132 Identities=20% Similarity=0.183 Sum_probs=74.3
Q ss_pred eeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCChhHHHHHHHHHHHHHhhhhhhheeccccccCc-cC
Q 011112 315 FYYQTEILNLEASFLGTARVVGWVGLMLGTYTYNGYL----KRLKLRRILLLTQVGLSILSFLDIVLVSRMNLTVGI-SD 389 (493)
Q Consensus 315 ~~~~~~~~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~----~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~~~g~-~~ 389 (493)
++|.+. +|.+....+.+-..+-+..++-.++.|... .|+||||.++.....+....+..+....-.-..++. +.
T Consensus 56 tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~ 134 (498)
T KOG0637|consen 56 TPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER 134 (498)
T ss_pred cHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence 445433 788877777764444444444444444444 478999988877666655443321111100000111 11
Q ss_pred c---eEe----eehhHHHHHHHHhhHhHHHHHHhhcCCCCchHH-HHHHHHHHHhhhhhhhHhHHH
Q 011112 390 K---TMV----LYGSALVDAVNQFKFMPFLILSGQLCPPGIEGT-LFALFMSISNFGSTVGSFFGA 447 (493)
Q Consensus 390 ~---~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~gt-~~gl~~~~~~lg~~~~~~i~g 447 (493)
. ... +...-+..+.+.....|.-++..+++.+..+-+ +++.+..+..+|+.+|=..|+
T Consensus 135 ~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 135 KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 1 111 111123345555667788889999988777777 888888888888777655555
No 286
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=80.77 E-value=57 Score=33.91 Aligned_cols=129 Identities=13% Similarity=0.066 Sum_probs=68.6
Q ss_pred HHHHHHHhhhCCCHhhHHHHHHHHHhhHhh-hhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccch---hhH
Q 011112 32 AVSYQLKDKLKFSPSASQFVSAVAFFPWSI-KPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFR---SST 107 (493)
Q Consensus 32 ~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~---~~~ 107 (493)
.+..|++++ |+|+..+|.+-++-.+.-.. -..+.++.+|++..+-+ .+-+.....+........+.++.+ .+.
T Consensus 280 lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G--~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 280 LMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG--LWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH--HHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 344577764 99999999877665543333 34566677776322111 122222222222222222333211 122
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLG 166 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~ 166 (493)
..++....+.-+|.=..|...+-++=|.. |+++||...|.=...+++--++-.+++
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V---~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENV---PESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccC---CHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 23333444444555555655555544444 579999999988888777766654443
No 287
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=76.43 E-value=94 Score=31.69 Aligned_cols=171 Identities=16% Similarity=0.087 Sum_probs=86.0
Q ss_pred chhHHHHHHHHHHHHhHHH-hHHHHHHHHHHhhhCCCHhhHHHHHHHHHh-----hHhhhhhhhhcccccccCCCCchhH
Q 011112 9 GVSFLWLICLIYFTQGFRS-FVWTAVSYQLKDKLKFSPSASQFVSAVAFF-----PWSIKPLYGILSDCIPIKGRKRIPY 82 (493)
Q Consensus 9 ~~~~~~~~~~~~f~~g~~~-~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l-----~~~~~~~~G~lsDr~~~~g~~rr~~ 82 (493)
..+..+.+-..|++.-... +--..+..++ .+++-+.-. ..+++.+ ...++|+.|-..|+. .|++.
T Consensus 25 ls~~~i~Ly~gy~lt~wgdR~W~F~VsL~M-~~L~gnsl~---lvAvyglvesgs~lvlg~ivGq~vDg~-----sr~Kv 95 (503)
T KOG2601|consen 25 LSSTVIFLYLGYFLTTWGDRMWEFSVSLFM-ILLGGNSLL---LVAVYGLVESGSQLVLGPIVGQWVDGM-----SRVKV 95 (503)
T ss_pred ccceeehhhHHHHHhHhhHhHHHHHHHHHH-HHHcCceeh---hHHHHHHHHHhHHHhhHHHHHHHhcch-----hHHHH
Confidence 3455566778888877743 4333344443 445532211 1222222 233588899999985 45555
Q ss_pred HHHHHHH----H--HHHHHHHhhcccc--hhhHHHHHHHHHHHHhhhhhHHHHHHH--HHH--HH----hhhhchhcchh
Q 011112 83 LVISTVL----S--LVPWLILGLNAFF--RSSTWHLIVLLTAQNLGSAMADVVVDA--MIA--EA----AKSERAAFAGD 146 (493)
Q Consensus 83 ii~~~~l----~--~~~~~~~~~~~~~--~~~~~~l~~~~~l~~~~~~~~~~~~~a--li~--~~----~~~~~~~~rg~ 146 (493)
+...+.+ . +.+.+...+..++ ....+.+..+..+....++..-....+ +.. |. ...|++....+
T Consensus 96 i~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~ 175 (503)
T KOG2601|consen 96 IQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTN 175 (503)
T ss_pred HHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhh
Confidence 4443322 1 1122222233321 124445666666655544443222111 110 10 01123444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011112 147 LQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFTVLPAI 188 (493)
Q Consensus 147 ~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~~~~~l 188 (493)
.++.....--.--++.|++.|.+.++.+-|..-...++...+
T Consensus 176 mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 176 MNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred cchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 446665566666788999999999888777654444444444
No 288
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=73.94 E-value=8.3 Score=39.03 Aligned_cols=63 Identities=14% Similarity=0.222 Sum_probs=46.4
Q ss_pred HHHHhhcCCCC---chHHHHHHHHHHHhhhhhhhHhHHHHhHHhhcCCCCCccchHHHHHHHHhhhhhhhhhhh
Q 011112 412 LILSGQLCPPG---IEGTLFALFMSISNFGSTVGSFFGAGLASSLSISSGSFDNLLLGISIQALCTFIPIAFLF 482 (493)
Q Consensus 412 ~~~~~~~~p~~---~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (493)
..+.++.++++ .+-+++..+....|+|..++..+.+++.+.+| +.+.+.++.++.+++++...
T Consensus 55 ~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~--------~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 55 SPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG--------WFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS---------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc--------hhhhhhHHHHHHHHHHHHHH
Confidence 45666776654 67778889999999999999888888887654 45677777777777766543
No 289
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=73.92 E-value=1.3 Score=43.88 Aligned_cols=113 Identities=11% Similarity=0.007 Sum_probs=1.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheecccc-c--c-CccCceEeeehhHHHHHHHHhhH
Q 011112 333 RVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSRMNL-T--V-GISDKTMVLYGSALVDAVNQFKF 408 (493)
Q Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~~~~-~--~-g~~~~~~~l~~~~~~~~~~~~~~ 408 (493)
....+++-.+|..+..+..-+...++.+.+..+...+.. +.+.+....+. . . -.++.+..+....+.+..++...
T Consensus 188 fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fi-Plf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 188 FLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFI-PLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHH-HHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 456777777777766543222123444444444444321 11111111100 0 0 01222222222233344444433
Q ss_pred hHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHH
Q 011112 409 MPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFG 446 (493)
Q Consensus 409 ~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~ 446 (493)
.-.+.+..+..++++|-.+-.+++..-.+|-..|+.++
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345667777777777777777767667766666554
No 290
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=70.94 E-value=62 Score=31.04 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=51.1
Q ss_pred HhhHhhhhh-hhhcccccccCCCCchhHHH----HHHHHHHHHHHHHhh-cccchhhHHHHHHHHHHHHh-hhhhHHHHH
Q 011112 56 FFPWSIKPL-YGILSDCIPIKGRKRIPYLV----ISTVLSLVPWLILGL-NAFFRSSTWHLIVLLTAQNL-GSAMADVVV 128 (493)
Q Consensus 56 ~l~~~~~~~-~G~lsDr~~~~g~~rr~~ii----~~~~l~~~~~~~~~~-~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~ 128 (493)
..++.++|+ .|++.- + ..+||+++. .+.+++.++.++.+. .++.......+.+.-++.|+ .-+.
T Consensus 151 v~g~~~G~~~ig~~nk-t---~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wgi----- 221 (267)
T PF07672_consen 151 VAGYFLGPFTIGLWNK-T---NYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGI----- 221 (267)
T ss_pred HHHHhhhceeeccchh-h---hhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhh-----
Confidence 334445653 566663 2 357787765 334445554444212 22211123333333334443 2233
Q ss_pred HHHHHHHh---hhhchhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011112 129 DAMIAEAA---KSERAAFAGDLQSLSWLAMAFGGICGSLLGGYA 169 (493)
Q Consensus 129 ~ali~~~~---~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l 169 (493)
|+.+..+- ++.+|++-|-..|+.+..+++...+.-++-..+
T Consensus 222 Q~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i 265 (267)
T PF07672_consen 222 QGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVI 265 (267)
T ss_pred hHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333322 223567778878877777776666655554433
No 291
>PRK03612 spermidine synthase; Provisional
Probab=70.36 E-value=37 Score=36.23 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=61.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhh--hhhhheeccccccCccCceEeeehhHH
Q 011112 322 LNLEASFLGTARVVGWVGLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSF--LDIVLVSRMNLTVGISDKTMVLYGSAL 399 (493)
Q Consensus 322 ~g~s~~~~gl~~~~~~~~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l--~~~~~~~~~~~~~g~~~~~~~l~~~~~ 399 (493)
+|-+....+++..+...+..+|+.+++|+.++ ..++....-..+..++.+ ..+.....+. ...........++
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~----~~~~~~~~~~~~~ 119 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-AAAGFVAVELLLALLGGLSALILYAAFAFQ----GLSRLLLYVLVLL 119 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 67777777777677777888888888877533 333322222111111111 1111111100 0000000000111
Q ss_pred HHHHHHhhHhHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhH-HhhcCC
Q 011112 400 VDAVNQFKFMPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLA-SSLSIS 456 (493)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~-~~~g~~ 456 (493)
..++.+ ...|..+-+.+....+..+...|-..+.+.+|+.+|..+.+.+. ..+|..
T Consensus 120 ~~~l~G-~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 120 IGLLIG-MEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred HHHHHH-HHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 111112 12444332222222223466778888889999999988877665 467653
No 292
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=58.52 E-value=2.1e+02 Score=30.19 Aligned_cols=128 Identities=11% Similarity=0.067 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhhhhheec--c--ccc--------cCccCc-
Q 011112 325 EASFLGTARVVGWV-GLMLGTYTYNGYLKRLKLRRILLLTQVGLSILSFLDIVLVSR--M--NLT--------VGISDK- 390 (493)
Q Consensus 325 s~~~~gl~~~~~~~-~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~~~l~~~~~~~~--~--~~~--------~g~~~~- 390 (493)
+++.+..+....-+ .+++...++.+++++..+++++-+.........++....... . ++. ...|..
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45556666555444 677788899999999999998776554443322211111110 0 000 001211
Q ss_pred -eEeeeh----hHHHHHHHHh----hH-hHHHHHHhhcCCCCchHHHHHHHHHHHhhhhhhhHhHHHHhHHh
Q 011112 391 -TMVLYG----SALVDAVNQF----KF-MPFLILSGQLCPPGIEGTLFALFMSISNFGSTVGSFFGAGLASS 452 (493)
Q Consensus 391 -~~~l~~----~~~~~~~~~~----~~-~~~~~~~~~~~p~~~~gt~~gl~~~~~~lg~~~~~~i~g~l~~~ 452 (493)
++.+.. ..+...+.+. .. .-.+.++.|.+..++..+.+++++...|++..+++.+...+...
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222211 1122222221 11 12356799999999999999999999999988888887777653
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=52.69 E-value=1.3e+02 Score=31.89 Aligned_cols=64 Identities=8% Similarity=-0.037 Sum_probs=48.6
Q ss_pred HHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Q 011112 117 QNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLF 182 (493)
Q Consensus 117 ~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~ 182 (493)
.++.....+...-+.+.+..+ +++++...+|-+.....+-.++-..+++.+.+++||+..-.+.
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~--~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYP--DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 455666666666666666665 3588888889888888887788788999999999999876554
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=50.97 E-value=1.3e+02 Score=31.28 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011112 108 WHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGG 167 (493)
Q Consensus 108 ~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g 167 (493)
+..++.-++.|+..|........+..+.. ++++|..+..+...+..+|..+|..++-
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v---~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQV---DPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677777777666555555554 3478888888888888888888877653
No 295
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=42.13 E-value=1.3e+02 Score=24.27 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc----HHHHHHHHHH
Q 011112 150 LSWLAMAFGGICGSLLGGYALTNIE----IDRIFLLFTV 184 (493)
Q Consensus 150 ~~~~~~~~G~~lg~~i~g~l~~~~g----w~~~f~~~~~ 184 (493)
.......+..++|..+|-|+-.+++ |..+|.+.++
T Consensus 47 ~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 47 LIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 3334444555566667777766654 5555555443
No 296
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=35.14 E-value=2.3e+02 Score=31.51 Aligned_cols=59 Identities=19% Similarity=0.158 Sum_probs=30.0
Q ss_pred HhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhh
Q 011112 59 WSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGS 121 (493)
Q Consensus 59 ~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 121 (493)
..++.+.+-++|.=+.++ +|.+-++++.+.++++.+...+... ..+.+....++.+|+.
T Consensus 37 l~lG~ia~~l~D~~~~~~-~R~~~l~it~~~f~i~sl~v~ll~~---~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 37 LCLGIIAAGLDDLDDRLT-GRLKNLIITLSCFSIASFLVQLLFP---KPWLFPFLLTLLTFGF 95 (701)
T ss_pred HHHhhHhhccCCCCccHH-HHHHHHHHHHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHH
Confidence 334566777888632222 3444455666666666555554332 3334444444445444
No 297
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=33.04 E-value=3e+02 Score=30.70 Aligned_cols=58 Identities=16% Similarity=0.131 Sum_probs=28.5
Q ss_pred hhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhh
Q 011112 61 IKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSA 122 (493)
Q Consensus 61 ~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 122 (493)
++.+.+-++|.=.... +|.+-++++.+.+.++.+...+..+ ..+.+....++.+|+.+
T Consensus 39 LG~ia~al~D~d~~~~-~R~~~l~~t~~~f~i~sl~v~ll~~---~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 39 LGIIAAALVDLDDRLT-GRLKNVIFTLICFSIASFSVELLFG---KPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HHHHhhccCCCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHH
Confidence 4555677788532222 3344445666666655555444321 33344455445455443
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=31.23 E-value=6.8e+02 Score=26.75 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=35.0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 011112 115 TAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIE 174 (493)
Q Consensus 115 ~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~g 174 (493)
.+..+....+.++..|.-+.+. +|.--|..|.+.++..++|+---..+.-++.|++.
T Consensus 413 ~l~sf~stvmFVai~AFharIS---DP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARIS---DPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc---CcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 3445555566666666666666 45778888888888888875433333333444333
No 299
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=28.43 E-value=4.6e+02 Score=23.87 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Q 011112 148 QSLSWLAMAFGGICGSLLGGYALTNIEIDRIFLLFT 183 (493)
Q Consensus 148 ~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~~~~ 183 (493)
.........++..+|.++++.+.++.+.. ..++.+
T Consensus 164 ~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~ 198 (209)
T PF06912_consen 164 RALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPA 198 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHH
Confidence 34555666677778888888888887743 444444
No 300
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=25.29 E-value=4.4e+02 Score=27.24 Aligned_cols=54 Identities=17% Similarity=0.137 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHH
Q 011112 124 ADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSLLGGYALTNIEIDRIFL 180 (493)
Q Consensus 124 ~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~i~g~l~~~~gw~~~f~ 180 (493)
+.+...+..+.+. ||.--|.-+++.++..++|.---.-+..++.|.++|+.++.
T Consensus 386 ~fv~~maf~aqis---dp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C~~ 439 (510)
T KOG3574|consen 386 MFVSGMAFHAQIS---DPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQCVL 439 (510)
T ss_pred HHHHHHHHHhhcC---CcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeeccc
Confidence 3344444444444 56888899999999999998877777778888777776543
No 301
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=22.67 E-value=5.8e+02 Score=26.02 Aligned_cols=145 Identities=12% Similarity=0.071 Sum_probs=63.2
Q ss_pred hchhHHHHHHHHHHHHhHHH--hHHHHHHHHHHhhhCCCHhhHHHHHHHHHhhHhhhhhhhhcccccccCCCCc-hhHHH
Q 011112 8 FGVSFLWLICLIYFTQGFRS--FVWTAVSYQLKDKLKFSPSASQFVSAVAFFPWSIKPLYGILSDCIPIKGRKR-IPYLV 84 (493)
Q Consensus 8 ~~~~~~~~~~~~~f~~g~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~G~lsDr~~~~g~~r-r~~ii 84 (493)
++|+.+|++..+-+.|-.++ ..+--+.|--.+.++--.+.+. ..++.......|.+--+ +.|+ ...+.
T Consensus 237 l~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~-----tlLGa~~~~~~g~l~i~----w~r~g~~ll~ 307 (433)
T KOG3810|consen 237 LKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVS-----TLLGAIAALAAGYLNIN----WNRWGDLLLA 307 (433)
T ss_pred hhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHH-----HHHHHHHHHHHHheeec----cchhhHHHHH
Confidence 57888888777766655443 3333221111122222222222 12233234556666543 2233 23344
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhchhcchhHHHHHHHHHHHHHHHHHH
Q 011112 85 ISTVLSLVPWLILGLNAFFRSSTWHLIVLLTAQNLGSAMADVVVDAMIAEAAKSERAAFAGDLQSLSWLAMAFGGICGSL 164 (493)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ali~~~~~~~~~~~rg~~~g~~~~~~~~G~~lg~~ 164 (493)
++...-+...++++.++ .+|...+..++...-+....+++..-+++-.. .+.-|-.+|+- ..++.++-.+
T Consensus 308 ~~s~~~agllf~m~~t~----~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~---~e~~gLvFGiN---TFvAl~lQsi 377 (433)
T KOG3810|consen 308 VGSAVQAGLLFIMAQTQ----HIWVCYAGYVLFRVIYQLTITIATFQIARNLS---SELFGLVFGIN---TFVALILQSI 377 (433)
T ss_pred HHHHHhhhhhhhhhccc----ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhh---hhhheeeeehH---HHHHHHHHHh
Confidence 44434444444444443 34444444444433344444444444444332 25556655553 2344445455
Q ss_pred HHHHhhc
Q 011112 165 LGGYALT 171 (493)
Q Consensus 165 i~g~l~~ 171 (493)
+.-.+.|
T Consensus 378 lT~iVvd 384 (433)
T KOG3810|consen 378 LTLIVVD 384 (433)
T ss_pred heEEEEc
Confidence 5444444
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.36 E-value=1.8e+02 Score=23.80 Aligned_cols=43 Identities=19% Similarity=0.030 Sum_probs=0.0
Q ss_pred HHHHHHhhHhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHHHHH
Q 011112 51 VSAVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVISTVLSLVPWLIL 97 (493)
Q Consensus 51 ~~s~~~l~~~~~~~~G~lsDr~~~~g~~rr~~ii~~~~l~~~~~~~~ 97 (493)
+.+=+.-+..++...||+.||+ .+.+||-++..++...+...+
T Consensus 48 lssefIsGilVGa~iG~llD~~----agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKF----AGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHHHH
No 303
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=20.36 E-value=2e+02 Score=19.65 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=13.5
Q ss_pred HHHHHHHHhhccccH----HHHHHHHHHHHHHHH
Q 011112 161 CGSLLGGYALTNIEI----DRIFLLFTVLPAIQL 190 (493)
Q Consensus 161 lg~~i~g~l~~~~gw----~~~f~~~~~~~~l~~ 190 (493)
+|..+|+++.+.+++ .+.-++.++++.+.+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiil 39 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIIL 39 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 455555555443332 333344444444443
Done!