AmiGO: BLAST Results


BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	2.4e-177
BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	9.6e-73
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	4.8e-71
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	1.0e-59
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	3.2e-58
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.1e-58
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.1e-58
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	1.1e-57
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	1.1e-57
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	5.9e-57
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	2.0e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	2.5e-56
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	2.9e-55
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	3.1e-55
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	3.7e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	6.1e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	7.4e-54
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	3.7e-48
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	3.7e-48
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	1.6e-47
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	gene from Rattus norvegicus	4.2e-47
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	4.5e-43
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.7e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	4.6e-41
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	4.6e-41
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	7.7e-41
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	1.1e-40
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	2.0e-40
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	5.3e-40
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.6e-38
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.6e-38
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.1e-36
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	1.1e-36
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	1.9e-35
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.9e-35
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	2.5e-35
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	5.7e-35
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.1e-34
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	1.9e-34
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	9.5e-34
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	1.2e-33
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	1.4e-33
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	1.4e-33
BLAST match view associations BLAST with VC_2564 VC_2564 VC_2564 ATP-dependent RNA helicase DbpA	protein from Vibrio cholerae O1 biovar El Tor	1.9e-33
BLAST match view associations BLAST with RVBD_3211 RVBD_3211 RVBD_3211 ATP-dependent RNA helicase rhlE	protein from Mycobacterium tuberculosis H37Rv	2.0e-33
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	2.2e-33
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	3.2e-33
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	3.4e-33
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.1e-33
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	5.2e-33
BLAST match view associations BLAST with BAS2301 BAS2301 BAS2301 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	6.7e-33
BLAST match view associations BLAST with BA_2475 BA_2475 BA_2475 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	6.7e-33
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	7.0e-33
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	8.2e-33
BLAST match view associations BLAST with rhlE_2 rhlE_2 rhlE_2 Putative ATP-dependent RNA helicase	protein from Pseudomonas protegens Pf-5	9.8e-33
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	1.3e-32
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	1.4e-32
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	2.9e-32
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	3.5e-32
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	3.8e-32
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	4.7e-32
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	6.0e-32
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	6.0e-32
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	9.6e-32
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	9.8e-32
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	1.0e-31
BLAST match view associations BLAST with dbpA dbpA dbpA ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	1.3e-31
BLAST match view associations BLAST with CPS_1540 CPS_1540 CPS_1540 ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	1.3e-31
BLAST match view associations BLAST with DBP2 DBP2 DBP2	gene_product from Candida albicans	1.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	1.6e-31
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	1.6e-31
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	1.6e-31
BLAST match view associations BLAST with CPS_2658 CPS_2658 CPS_2658 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.0e-31
BLAST match view associations BLAST with SO_3783 SO_3783 SO_3783 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.4e-31
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	2.6e-31
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	2.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	2.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	2.6e-31
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	2.7e-31
BLAST match view associations BLAST with RRP3 RRP3 RRP3 Protein involved in rRNA processing	gene from Saccharomyces cerevisiae	3.6e-31
BLAST match view associations BLAST with DBP2 DBP2 DBP2 ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	3.6e-31
BLAST match view associations BLAST with AT2G42520 AT2G42520 AT2G42520	protein from Arabidopsis thaliana	3.7e-31
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	4.2e-31
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	4.2e-31
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	4.2e-31
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	4.3e-31
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	4.3e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	4.8e-31
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011113
        (493 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955106 - symbol:emb1138 "embryo defective 1...  1652  2.4e-177  2
TAIR|locus:2087852 - symbol:PMH2 "putative mitochondrial ...   735  9.6e-73   1
TAIR|locus:2087832 - symbol:PMH1 "putative mitochondrial ...   719  4.8e-71   1
ZFIN|ZDB-GENE-031113-10 - symbol:ddx21 "DEAD (Asp-Glu-Ala...   612  1.0e-59   1
UNIPROTKB|F1MMK3 - symbol:DDX50 "Uncharacterized protein"...   598  3.2e-58   1
UNIPROTKB|E2QTT0 - symbol:DDX50 "Uncharacterized protein"...   596  5.1e-58   1
UNIPROTKB|E2RPT4 - symbol:DDX50 "Uncharacterized protein"...   596  5.1e-58   1
UNIPROTKB|Q9BQ39 - symbol:DDX50 "ATP-dependent RNA helica...   593  1.1e-57   1
MGI|MGI:2182303 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) bo...   593  1.1e-57   1
TAIR|locus:2167903 - symbol:PRH75 species:3702 "Arabidops...   586  5.9e-57   1
UNIPROTKB|E1BW15 - symbol:DDX50 "Uncharacterized protein"...   581  2.0e-56   1
UNIPROTKB|F1SUG8 - symbol:DDX50 "Uncharacterized protein"...   580  2.5e-56   1
UNIPROTKB|E2QTL6 - symbol:DDX21 "Uncharacterized protein"...   574  1.1e-55   1
UNIPROTKB|F6V8G4 - symbol:DDX21 "Uncharacterized protein"...   574  1.1e-55   1
UNIPROTKB|A4FV23 - symbol:DDX21 "DDX21 protein" species:9...   570  2.9e-55   1
MGI|MGI:1860494 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) bo...   573  3.1e-55   1
RGD|1307306 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box he...   569  3.7e-55   1
UNIPROTKB|Q9NR30 - symbol:DDX21 "Nucleolar RNA helicase 2...   567  6.1e-55   1
UNIPROTKB|F1LX16 - symbol:F1LX16 "Uncharacterized protein...   562  2.1e-54   1
UNIPROTKB|F1SUG7 - symbol:DDX21 "Uncharacterized protein"...   561  7.4e-54   1
GENEDB_PFALCIPARUM|PFE0215w - symbol:PFE0215w "ATP-depend...   506  3.7e-48   1
UNIPROTKB|Q8I457 - symbol:PFE0215w "ATP-dependent helicas...   506  3.7e-48   1
UNIPROTKB|E1C6M6 - symbol:DDX21 "Uncharacterized protein"...   497  1.6e-47   1
RGD|1310934 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box po...   493  4.2e-47   1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN...   455  4.5e-43   1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN...   440  1.7e-41   1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN...   436  4.6e-41   1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN...   436  4.6e-41   1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN...   436  4.6e-41   1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN...   436  4.6e-41   1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN...   436  4.6e-41   1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli...   436  4.6e-41   1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli...   434  7.7e-41   1
UNIPROTKB|Q4K8U0 - symbol:deaD "Cold-shock DEAD box prote...   399  1.1e-40   2
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN...   430  2.0e-40   1
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN...   426  5.3e-40   1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel...   412  1.6e-38   1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he...   412  1.6e-38   1
UNIPROTKB|Q9KLE2 - symbol:VC_A0804 "ATP-dependent RNA hel...   400  1.1e-36   1
TIGR_CMR|VC_A0804 - symbol:VC_A0804 "ATP-dependent RNA he...   400  1.1e-36   1
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli...   383  1.9e-35   1
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli...   383  1.9e-35   1
UNIPROTKB|Q11039 - symbol:deaD "Cold-shock DEAD box prote...   383  2.5e-35   1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1...   383  5.7e-35   1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi...   383  1.1e-34   1
TIGR_CMR|CPS_1726 - symbol:CPS_1726 "RNA helicase DeaD" s...   378  1.9e-34   1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme...   376  5.0e-34   1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he...   367  9.5e-34   1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he...   366  1.2e-33   1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu...   370  1.4e-33   1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi...   377  1.4e-33   1
TIGR_CMR|VC_2564 - symbol:VC_2564 "ATP-dependent RNA heli...   340  1.9e-33   2
UNIPROTKB|O05855 - symbol:rhlE "PROBABLE ATP-DEPENDENT RN...   364  2.0e-33   1
UNIPROTKB|Q48PB7 - symbol:PSPPH_0449 "ATP-dependent RNA h...   369  2.2e-33   1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli...   362  3.2e-33   1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ...   367  3.4e-33   1
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he...   361  4.1e-33   1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas...   360  5.2e-33   1
UNIPROTKB|Q81QF0 - symbol:BAS2301 "ATP-dependent RNA heli...   359  6.7e-33   1
TIGR_CMR|BA_2475 - symbol:BA_2475 "ATP-dependent RNA heli...   359  6.7e-33   1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi...   364  7.0e-33   1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli...   361  7.4e-33   1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ...   365  8.2e-33   1
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ...   363  9.8e-33   1
UNIPROTKB|P0A9P6 - symbol:deaD "DeaD, DEAD-box RNA helica...   362  1.3e-32   1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie...   356  1.4e-32   1
UNIPROTKB|F1NJ30 - symbol:DDX21 "Uncharacterized protein"...   353  2.9e-32   1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi...   357  3.5e-32   1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe...   353  3.8e-32   1
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas...   351  4.7e-32   1
UNIPROTKB|Q48AV0 - symbol:CPS_0042 "ATP-dependent RNA hel...   350  6.0e-32   1
TIGR_CMR|CPS_0042 - symbol:CPS_0042 "ATP-dependent RNA he...   350  6.0e-32   1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer...   353  7.3e-32   1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein...   354  9.6e-32   1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he...   348  9.8e-32   1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p...   354  1.0e-31   1
UNIPROTKB|Q485I3 - symbol:dbpA "ATP-dependent RNA helicas...   318  1.3e-31   2
TIGR_CMR|CPS_1540 - symbol:CPS_1540 "ATP-dependent RNA he...   318  1.3e-31   2
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica...   350  1.6e-31   1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"...   353  1.6e-31   1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas...   346  1.6e-31   1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he...   346  1.6e-31   1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation...   352  1.7e-31   1
TIGR_CMR|CPS_2658 - symbol:CPS_2658 "ATP-dependent RNA he...   345  2.0e-31   1
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli...   347  2.4e-31   1
UNIPROTKB|Q8ECL2 - symbol:SO_3125 "ATP-dependent RNA heli...   344  2.6e-31   1
TIGR_CMR|SO_3125 - symbol:SO_3125 "ATP-dependent RNA heli...   344  2.6e-31   1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"...   351  2.6e-31   1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"...   351  2.6e-31   1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica...   351  2.6e-31   1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph...   352  2.7e-31   1
SGD|S000001107 - symbol:RRP3 "Protein involved in rRNA pr...   343  3.6e-31   1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ...   346  3.6e-31   1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi...   349  3.7e-31   1
UNIPROTKB|Q8EBV7 - symbol:SO_3388 "ATP-dependent RNA heli...   342  4.2e-31   1
TIGR_CMR|SO_3388 - symbol:SO_3388 "ATP-dependent RNA heli...   342  4.2e-31   1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo...   349  4.2e-31   1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi...   349  4.3e-31   1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po...   349  4.3e-31   1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"...   348  4.8e-31   1

WARNING:  Descriptions of 800 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:504955106 [details] [associations]
            symbol:emb1138 "embryo defective 1138" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
            GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
            SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
            EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
            EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
            EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
            IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
            RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
            SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
            EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
            GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
            PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
            Uniprot:Q8L7S8
        Length = 748

 Score = 1652 (586.6 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
 Identities = 321/378 (84%), Positives = 354/378 (93%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             MLAVGFEE VE ILENLP KRQSMLFSATMP+WVKKL+RKYLDNPLNIDLVG+QDEKLAE
Sbjct:   264 MLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAE 323

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGD 120
             GIKLYAI+TT+TSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL++ IA+EALHGD
Sbjct:   324 GIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGD 383

Query:   121 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 180
             ISQHQRERTLN FRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGR
Sbjct:   384 ISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 443

Query:   181 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPES 240
             AGKEG+AILM TSSQ+RTVRSLERDVGC FEF+SPP V D+LESSA+QVVATLNGVHP+S
Sbjct:   444 AGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDS 503

Query:   241 VEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRG 300
             ++FF+ TAQ+L EEKGTDALAAALA LSGFS+PPSSRSL++HE+GWVTLQL RD   +RG
Sbjct:   504 IKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARG 563

Query:   301 FMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTIS 360
             F+SARSV GFLSD+Y TAADE+GKI +IADDR+QGAVFDLPEEIAKELL K +P GN++S
Sbjct:   564 FLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLS 623

Query:   361 KITKLPALQDDGPSSDNY 378
              ITKLP LQDDGPSSDNY
Sbjct:   624 MITKLPPLQDDGPSSDNY 641

 Score = 92 (37.4 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query:   454 DDWLIXXXXXXXXXX-XXXXXXXXACFNCGKSGHRASECPN 493
             DDWLI                   +CF CGKSGHRA++CP+
Sbjct:   704 DDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPD 744


>TAIR|locus:2087852 [details] [associations]
            symbol:PMH2 "putative mitochondrial RNA helicase 2"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
            "cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
            evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
            GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
            UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
            PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
            KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
            HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
            ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
            Uniprot:Q9LUW5
        Length = 616

 Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
 Identities = 141/219 (64%), Positives = 174/219 (79%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML VGF EDVE+ILE LP KRQSM+FSATMPSW++ L++KYL+NPL +DLVG+ D+KLA+
Sbjct:   262 MLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLAD 321

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGD 120
             GI  Y+I   +  + +I+  L+T +AKGGK IVFTQTKRDAD +S AL      EALHGD
Sbjct:   322 GITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGD 381

Query:   121 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 180
             ISQ QRERTL GFR G F +LVATDVAARGLD+PNVDLIIHYELPN+ ETFVHR+GRTGR
Sbjct:   382 ISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGR 441

Query:   181 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             AGK+G+AIL+++  Q R V+ +ER+VG +F  +    VE
Sbjct:   442 AGKKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIAVE 480


>TAIR|locus:2087832 [details] [associations]
            symbol:PMH1 "putative mitochondrial RNA helicase 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
            GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
            EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
            UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
            STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
            GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
            InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
            Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
        Length = 610

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 140/235 (59%), Positives = 177/235 (75%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML VGF EDVE+IL+ LP KRQSM+FSATMPSW++ L++KYL+NPL IDLVG+ D+KLA+
Sbjct:   274 MLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLAD 333

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGD 120
             GI +Y+I+  +  + +I+  L+  + KGGK IVFTQTKRDAD ++  L      EALHGD
Sbjct:   334 GITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGD 393

Query:   121 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 180
             ISQ QRERTL GFR G F++LVATDVAARGLD+PNVDL+IHYELPN+ ETFVHR+GRTGR
Sbjct:   394 ISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGR 453

Query:   181 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG 235
             AGK+G+AIL+    Q R V+ +E++VG +F  +    VE    S  E V A   G
Sbjct:   454 AGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGG 508


>ZFIN|ZDB-GENE-031113-10 [details] [associations]
            symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
            ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
            OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
            RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
            STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
            Uniprot:B1H1J4
        Length = 759

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 153/386 (39%), Positives = 229/386 (59%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNP-LNIDLVGNQ 54
             ML +GF E VE IL     ++   K Q++LFSAT PSWV  +++KY+ +  +++DL+G +
Sbjct:   324 MLDMGFAEQVEEILSASYKKDAEQKPQTLLFSATCPSWVYDVAKKYMRSQFIHVDLIGKK 383

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI+   + + +++ D+I VY+   G+TIVF +TK++A E+SL  TSI  
Sbjct:   384 TQKAATTVEHLAIACHWSQRASVIGDVIQVYSGSHGRTIVFCETKKEATELSLN-TSIKQ 442

Query:   114 S-EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 172
             S ++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I    PND E+++
Sbjct:   443 SAQSLHGDIPQKQREVTLKGFRNGSFEVLVATNVAARGLDIPEVDLVIQSSPPNDVESYI 502

Query:   173 HRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVAT 232
             HRSGRTGRAG+ G  I  +   +   ++ +E+  G  F+ V  P   D+++SS++  V  
Sbjct:   503 HRSGRTGRAGRTGICICFYQRKEESQLKFVEQKAGITFKRVGVPTAYDIIQSSSKDAVRF 562

Query:   233 LNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             L+ V   +V +F   AQ LI+++G  +ALAAALA +SG +     RSLIN E G+ ++ L
Sbjct:   563 LDSVPAVAVGYFREAAQELIQQRGAVEALAAALAHISG-ATSLEQRSLINSEPGFSSMIL 621

Query:   292 TRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNK 351
             +          + R +   L +        I   H++     +G  FD+P    KE+  K
Sbjct:   622 SCSQEMHSISFAWRGLKEQLGEEID---QHIS--HMVFIKGKKGVCFDVPVSKLKEVQEK 676

Query:   352 -QIPPGNTISKITKLPALQDD-GPSS 375
              Q     T+S  T+LP L+    P+S
Sbjct:   677 WQDSRRWTLSTATQLPELEQSLRPNS 702


>UNIPROTKB|F1MMK3 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
            UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
            GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
            Uniprot:F1MMK3
        Length = 737

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 147/387 (37%), Positives = 223/387 (57%)

Query:     1 MLAVGFEEDVELILE-----NLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF E VE IL      +     Q++LFSAT P WV K+++KY+ +    +DLVG  
Sbjct:   295 MLDLGFAEQVEDILHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKM 354

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       
Sbjct:   355 TQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQN 414

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   415 AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 474

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L
Sbjct:   475 RSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSL 534

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLT 292
               V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L 
Sbjct:   535 ASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLE 593

Query:   293 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 352
                       + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L  + 
Sbjct:   594 SPEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERLQAEW 648

Query:   353 IPPGNTISKITKLPALQD--DGPSSDN 377
                   +S   KLP +++  DG +S N
Sbjct:   649 HDSDWILSVPAKLPEIEEYYDGNTSSN 675


>UNIPROTKB|E2QTT0 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
        Length = 738

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 146/387 (37%), Positives = 223/387 (57%)

Query:     1 MLAVGFEEDVELILE-----NLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF E VE I+      +     Q++LFSAT P WV K+++KY+ +    +DLVG  
Sbjct:   296 MLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKM 355

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       
Sbjct:   356 TQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQN 415

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   416 AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 475

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L
Sbjct:   476 RSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSL 535

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLT 292
               V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L 
Sbjct:   536 ASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLE 594

Query:   293 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 352
                       + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L  + 
Sbjct:   595 SPEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERLQAEW 649

Query:   353 IPPGNTISKITKLPALQD--DGPSSDN 377
                   +S   KLP +++  DG +S N
Sbjct:   650 HDSDWILSLPAKLPEIEEYYDGNTSSN 676


>UNIPROTKB|E2RPT4 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            EMBL:AAEX03002786 Ensembl:ENSCAFT00000038045 Uniprot:E2RPT4
        Length = 687

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 146/387 (37%), Positives = 223/387 (57%)

Query:     1 MLAVGFEEDVELILE-----NLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF E VE I+      +     Q++LFSAT P WV K+++KY+ +    +DLVG  
Sbjct:   297 MLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKM 356

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       
Sbjct:   357 TQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQN 416

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   417 AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 476

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L
Sbjct:   477 RSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSL 536

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLT 292
               V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L 
Sbjct:   537 ASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLE 595

Query:   293 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 352
                       + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L  + 
Sbjct:   596 SPEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERLQAEW 650

Query:   353 IPPGNTISKITKLPALQD--DGPSSDN 377
                   +S   KLP +++  DG +S N
Sbjct:   651 HDSDWILSLPAKLPEIEEYYDGNTSSN 677


>UNIPROTKB|Q9BQ39 [details] [associations]
            symbol:DDX50 "ATP-dependent RNA helicase DDX50"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
            EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
            UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
            SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
            DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
            PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
            KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
            HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
            PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
            PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
            GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
            CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
        Length = 737

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 146/387 (37%), Positives = 223/387 (57%)

Query:     1 MLAVGFEEDVELILE-----NLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF E VE I+      +     Q++LFSAT P WV K+++KY+ +    +DLVG  
Sbjct:   295 MLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKM 354

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       
Sbjct:   355 TQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQN 414

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   415 AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 474

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L
Sbjct:   475 RSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSL 534

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLT 292
               V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L 
Sbjct:   535 ASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLE 593

Query:   293 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 352
                       + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L  + 
Sbjct:   594 SLEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERLQAEW 648

Query:   353 IPPGNTISKITKLPALQD--DGPSSDN 377
                   +S   KLP +++  DG +S N
Sbjct:   649 HDSDWILSVPAKLPEIEEYYDGNTSSN 675


>MGI|MGI:2182303 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
            UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
            PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
            Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
            UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
            CleanEx:MM_DDX50 Genevestigator:Q99MJ9
            GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
        Length = 734

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 144/387 (37%), Positives = 222/387 (57%)

Query:     1 MLAVGFEEDVELILE-----NLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF E VE I+      +     Q++LFSAT P WV K+++KY+ +    +DLVG  
Sbjct:   292 MLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKM 351

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       
Sbjct:   352 TQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQN 411

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   412 AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 471

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  +  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L
Sbjct:   472 RSGRTGRAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSL 531

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLT 292
               V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L 
Sbjct:   532 ASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLE 590

Query:   293 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 352
                       + + +   LS     A   + ++ ++  +   G  FD+P   ++ L  + 
Sbjct:   591 SPEEIQDVSCAWKELNRKLSS---NAVSHVTRMCLLKGN--MGVCFDVPTSESERLQAEW 645

Query:   353 IPPGNTISKITKLPALQD--DGPSSDN 377
                   +S   KLP +++  DG +S N
Sbjct:   646 HDSDWILSVPAKLPEIEEYYDGNTSSN 672


>TAIR|locus:2167903 [details] [associations]
            symbol:PRH75 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IEA;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0001510 "RNA methylation" evidence=RCA] [GO:0051604 "protein
            maturation" evidence=RCA] [GO:0016070 "RNA metabolic process"
            evidence=TAS] [GO:0017151 "DEAD/H-box RNA helicase binding"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
            GO:GO:0003723 GO:GO:0016070 GO:GO:0017151 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB019235 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 EMBL:X99938 EMBL:AY039576 EMBL:AY056137
            EMBL:BT008581 IPI:IPI00520493 RefSeq:NP_201025.1 UniGene:At.22598
            ProteinModelPortal:Q39189 SMR:Q39189 IntAct:Q39189 STRING:Q39189
            PaxDb:Q39189 PRIDE:Q39189 EnsemblPlants:AT5G62190.1 GeneID:836340
            KEGG:ath:AT5G62190 GeneFarm:918 TAIR:At5g62190 InParanoid:Q39189
            OMA:QCEPPRE PhylomeDB:Q39189 ProtClustDB:CLSN2687322
            Genevestigator:Q39189 GermOnline:AT5G62190 Uniprot:Q39189
        Length = 671

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 149/382 (39%), Positives = 214/382 (56%)

Query:     1 MLAVGFEEDVELILENLPP--KRQSMLFSATMPSWVKKLSRKYLD-NPLNIDLVGNQDEK 57
             ML +GF EDVELIL  +    K Q++LFSAT+PSWVK +S ++L  +   IDLVGN   K
Sbjct:   260 MLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMK 319

Query:    58 LAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEAL 117
              +  ++  AI     +   ++ D+I+ Y+ GG+TI+F +TK    E+S  L     S AL
Sbjct:   320 ASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDG---SRAL 376

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HG+I Q QRE TL GFR GKF  LVAT+VAARGLDI +V LII  E P + E ++HRSGR
Sbjct:   377 HGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGR 436

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVH 237
             TGRAG  G A+ ++  S++ +V  +E++ G KFE ++ P  +++  S   +    +  V 
Sbjct:   437 TGRAGNTGVAVTLY-DSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVC 495

Query:   238 PESVEFFTPTAQRLIEEKGTDA---LAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRD 294
                V  F   A+ L+E  G  A   LA ALA+ +GF+     RSL+   + +VTL L   
Sbjct:   496 DSVVPAFLEAAKELLETSGLSAEVLLAKALAKTAGFTEI-KKRSLLTSMENYVTLHLEA- 553

Query:   295 SAFSRGFMSARSVMGFLSDVYPTAADE-IGKIHIIADDRVQGAVFDLPE-EIAKELLNKQ 352
                 +   S   V G L  V P    E I  + + AD    GAVFD+ + ++   +   Q
Sbjct:   554 ---GKPIYSPSFVYGLLRRVLPDDKVEMIEGLSLTADKT--GAVFDVKQSDLDLFIAGAQ 608

Query:   353 IPPGNTISKITK-LPALQDDGP 373
                G+   ++ K +P LQ+  P
Sbjct:   609 KSAGSMSLEVVKVMPKLQEREP 630


>UNIPROTKB|E1BW15 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0043330 GeneTree:ENSGT00680000100003 OMA:EILCVAY
            EMBL:AADN02028009 IPI:IPI00582179 Ensembl:ENSGALT00000006591
            Uniprot:E1BW15
        Length = 693

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 127/299 (42%), Positives = 190/299 (63%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF E VE IL     ++     Q++LFSAT P+WV  +++KY+ +    +DL+G +
Sbjct:   271 MLDMGFAEQVEDILRVAYKKDSEDNPQTLLFSATCPNWVYDVAKKYMKSKYEQVDLIGRK 330

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    + +  ++ D+I VY+   G+TIVF +TK+DA+E++L  +    
Sbjct:   331 TQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGSYGRTIVFCETKKDANELALNASIKQD 390

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
              ++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E+++H
Sbjct:   391 CQSLHGDIPQKQREITLKGFRNGAFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIH 450

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +R +E   G  F+ V  P   D++++S++  +  L
Sbjct:   451 RSGRTGRAGRTGICICFYQRKEENQLRYVEVKAGITFKRVGVPTATDIIKASSKDAIRCL 510

Query:   234 NGVHPESVEFFTPTAQRLIEEKG-TDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V   ++E+F  +AQ LIEEKG  +ALAAALA +SG +     RSL+N + G+VT+ L
Sbjct:   511 DSVPQTAIEYFKESAQLLIEEKGPVNALAAALAHISG-ATSIEQRSLLNSDVGFVTMVL 568


>UNIPROTKB|F1SUG8 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
            EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
        Length = 737

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 143/387 (36%), Positives = 221/387 (57%)

Query:     1 MLAVGFEEDVELILE-----NLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF E VE I+      +     Q++LFSAT P WV K+++KY+ +    +DLVG  
Sbjct:   295 MLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKM 354

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       
Sbjct:   355 TQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQN 414

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   415 AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 474

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L
Sbjct:   475 RSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSL 534

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLT 292
               V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L 
Sbjct:   535 ASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLE 593

Query:   293 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 352
                       + + +   LS        +I ++ ++  +   G  FD+    ++ L  + 
Sbjct:   594 SPEEIQDVSCAWKELNKKLSS---NVLSQITRMCLLKGN--MGVCFDVSTAESERLQAEW 648

Query:   353 IPPGNTISKITKLPALQD--DGPSSDN 377
                   +S   KLP +++  DG ++ N
Sbjct:   649 HDSDWILSVPAKLPEIEEHYDGNTASN 675


>UNIPROTKB|E2QTL6 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003725 "double-stranded
            RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0009615
            GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195
            CTD:9188 RefSeq:XP_851746.2 ProteinModelPortal:E2QTL6
            Ensembl:ENSCAFT00000021901 GeneID:476891 KEGG:cfa:476891
            NextBio:20852481 Uniprot:E2QTL6
        Length = 785

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 124/299 (41%), Positives = 190/299 (63%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   346 MLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKK 405

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S  ++    
Sbjct:   406 TQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVSIRQD 465

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   466 AQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIH 525

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   526 RSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLL 585

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT+ L
Sbjct:   586 DSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSDAGFVTMIL 643


>UNIPROTKB|F6V8G4 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:QCEPPRE EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021901 Uniprot:F6V8G4
        Length = 786

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 124/299 (41%), Positives = 190/299 (63%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   346 MLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKK 405

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S  ++    
Sbjct:   406 TQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVSIRQD 465

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   466 AQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIH 525

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   526 RSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLL 585

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT+ L
Sbjct:   586 DSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSDAGFVTMIL 643


>UNIPROTKB|A4FV23 [details] [associations]
            symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
            EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
            UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
            KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
        Length = 784

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 124/299 (41%), Positives = 189/299 (63%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   345 MLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPYWVFNVAKKYMKSTYEQVDLIGKK 404

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S  +     
Sbjct:   405 TQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGFQGRTIIFCETKKEAQELSQNVAVRQD 464

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E+++H
Sbjct:   465 AQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIH 524

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   525 RSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSPTEIIKASSKDAIRLL 584

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN E G+VT+ L
Sbjct:   585 DSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSEAGFVTMIL 642


>MGI|MGI:1860494 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 21"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003725 "double-stranded RNA binding"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=ISS] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=ISS] [GO:0009615 "response to virus" evidence=IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043330
            "response to exogenous dsRNA" evidence=IMP] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1860494 GO:GO:0005524 GO:GO:0005730 EMBL:CH466553
            GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:AF220365
            EMBL:AF159131 EMBL:AK160095 EMBL:BC043655 IPI:IPI00120691
            RefSeq:NP_062426.2 UniGene:Mm.413275 ProteinModelPortal:Q9JIK5
            SMR:Q9JIK5 DIP:DIP-48574N IntAct:Q9JIK5 STRING:Q9JIK5
            PhosphoSite:Q9JIK5 PaxDb:Q9JIK5 PRIDE:Q9JIK5
            Ensembl:ENSMUST00000045866 GeneID:56200 KEGG:mmu:56200
            InParanoid:Q3TVJ3 NextBio:312026 Bgee:Q9JIK5 CleanEx:MM_DDX21
            Genevestigator:Q9JIK5 GermOnline:ENSMUSG00000020075 Uniprot:Q9JIK5
        Length = 851

 Score = 573 (206.8 bits), Expect = 3.1e-55, P = 3.1e-55
 Identities = 124/299 (41%), Positives = 189/299 (63%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   416 MLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKK 475

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK+DA E+S        
Sbjct:   476 TQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQD 535

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E+++H
Sbjct:   536 AQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIH 595

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  + + +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   596 RSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLL 655

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT+ L
Sbjct:   656 DSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSQAGFVTMIL 713


>RGD|1307306 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
            to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
            RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
            STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
            Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
            UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
            Uniprot:Q3B8Q1
        Length = 782

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 124/299 (41%), Positives = 188/299 (62%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   340 MLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKK 399

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK+DA E+S        
Sbjct:   400 TQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQD 459

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E+++H
Sbjct:   460 AQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIH 519

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   520 RSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLL 579

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT+ L
Sbjct:   580 DSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSQAGFVTMIL 637


>UNIPROTKB|Q9NR30 [details] [associations]
            symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
            sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
            to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
            EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
            EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
            EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
            EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
            IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
            UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
            IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
            DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
            PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
            KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
            H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
            neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
            PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
            ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
            Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
        Length = 783

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 124/299 (41%), Positives = 187/299 (62%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   344 MLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKK 403

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S        
Sbjct:   404 TQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQD 463

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I    P D E+++H
Sbjct:   464 AQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIH 523

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   524 RSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLL 583

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN   G+VT+ L
Sbjct:   584 DSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSNVGFVTMIL 641


>UNIPROTKB|F1LX16 [details] [associations]
            symbol:F1LX16 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
            Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
        Length = 659

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 123/299 (41%), Positives = 187/299 (62%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   224 MLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYKQVDLIGKK 283

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK+DA E+S        
Sbjct:   284 TQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQD 343

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR   F VLVAT+VAARGLDIP VDL++    P D E+++H
Sbjct:   344 AQSLHGDIPQKQREITLKGFRNDNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIH 403

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   404 RSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLL 463

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT+ L
Sbjct:   464 DSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSQAGFVTMIL 521


>UNIPROTKB|F1SUG7 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            [GO:0009615 "response to virus" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            OMA:EILCVAY EMBL:CT737244 EMBL:CU468175 Ensembl:ENSSSCT00000011217
            Uniprot:F1SUG7
        Length = 855

 Score = 561 (202.5 bits), Expect = 7.4e-54, P = 7.4e-54
 Identities = 143/386 (37%), Positives = 219/386 (56%)

Query:     1 MLAVGFEEDVELIL-----ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQ 54
             ML +GF + VE IL     ++     Q++LFSAT P WV  +++KY+ +    +DL+G +
Sbjct:   416 MLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKK 475

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALTSIIA 113
              +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S        
Sbjct:   476 TQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNAAVRQD 535

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E+++H
Sbjct:   536 AQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIH 595

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL 233
             RSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  +  L
Sbjct:   596 RSGRTGRAGRTGICICFYQHKEEYQLTLVEQKAGIKFKRIGVPSPTEIIKASSKDAIRLL 655

Query:   234 NGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLT 292
             + V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT+ L 
Sbjct:   656 DSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSDAGFVTMIL- 713

Query:   293 RDSA----FSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 348
             R S      S  +   +  +G   D+     D   K  +    + QG  FD+P     E+
Sbjct:   714 RCSIEMPNISYAWKELKEQLG--EDI-----DSKVKGMVFLKGK-QGVCFDIPTAAVTEV 765

Query:   349 LNKQIPPGN-TISKITKLPALQDDGP 373
               K        +S  T+ P L+  GP
Sbjct:   766 QEKWHDSRRWQLSVATEQPELE--GP 789


>GENEDB_PFALCIPARUM|PFE0215w [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0020011
            "apicoplast" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 506 (183.2 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 133/372 (35%), Positives = 207/372 (55%)

Query:     1 MLAVGFEEDVELILENLPPKR-QSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 59
             ML +GF  D+E IL N+  K  Q +L+SAT PSW+K +S KYL NP  ID+V + + K A
Sbjct:   343 MLNLGFTHDIERILSNINLKEAQVLLYSATTPSWIKDISSKYLKNPFCIDVVDSSN-KTA 401

Query:    60 EGIKLYAISTT--ATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEA 116
             + IK  AI T      K  +L D+I V + GG+ I+FT+TK +AD + S      ++   
Sbjct:   402 KNIKHIAIKTPYDIKEKALLLEDIILVKSNGGQVIIFTRTKLEADILCSEGSFKSLSFAV 461

Query:   117 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSG 176
             LHG+I+Q  RE T+  FRQG F +L+ATD+A+RGLDI NVDL+I    PN    ++HR+G
Sbjct:   462 LHGNIAQSTREYTMQRFRQGMFQILIATDIASRGLDISNVDLVIQCFPPNYSAVYIHRAG 521

Query:   177 RTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGV 236
             RTGRA K+GT+++++++  ++ +  +E++ G KF   + P  E V   ++      +  V
Sbjct:   522 RTGRANKKGTSLVLYSNEDKQDLIKIEKNCGIKFNMETLPNNEQVFHCASAIASKKVENV 581

Query:   237 HPESVEFFTPTAQRLIEEKGT---DALAAALAQLSGFSRPP--SSRSLINHEQGWVTLQ- 290
             + E + FF  TA+ LI +  +   D +      L+  ++      RSLIN     VTL  
Sbjct:   582 NKEILPFFHDTAKELINKSNSLKIDQIELISRCLAIIAKKEHIKKRSLINGLSETVTLNF 641

Query:   291 LTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLN 350
             + ++  +S        V    +++     ++I +I I   DR   + FD+ E +A EL  
Sbjct:   642 INKNRKWSSEADIVYWVNKLSNELNVNTFNKILQIKIDNKDRAS-SFFDINENLA-ELFL 699

Query:   351 KQIPPGNTISKI 362
             +      T+SKI
Sbjct:   700 QNF---KTMSKI 708


>UNIPROTKB|Q8I457 [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 506 (183.2 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 133/372 (35%), Positives = 207/372 (55%)

Query:     1 MLAVGFEEDVELILENLPPKR-QSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 59
             ML +GF  D+E IL N+  K  Q +L+SAT PSW+K +S KYL NP  ID+V + + K A
Sbjct:   343 MLNLGFTHDIERILSNINLKEAQVLLYSATTPSWIKDISSKYLKNPFCIDVVDSSN-KTA 401

Query:    60 EGIKLYAISTT--ATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEA 116
             + IK  AI T      K  +L D+I V + GG+ I+FT+TK +AD + S      ++   
Sbjct:   402 KNIKHIAIKTPYDIKEKALLLEDIILVKSNGGQVIIFTRTKLEADILCSEGSFKSLSFAV 461

Query:   117 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSG 176
             LHG+I+Q  RE T+  FRQG F +L+ATD+A+RGLDI NVDL+I    PN    ++HR+G
Sbjct:   462 LHGNIAQSTREYTMQRFRQGMFQILIATDIASRGLDISNVDLVIQCFPPNYSAVYIHRAG 521

Query:   177 RTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGV 236
             RTGRA K+GT+++++++  ++ +  +E++ G KF   + P  E V   ++      +  V
Sbjct:   522 RTGRANKKGTSLVLYSNEDKQDLIKIEKNCGIKFNMETLPNNEQVFHCASAIASKKVENV 581

Query:   237 HPESVEFFTPTAQRLIEEKGT---DALAAALAQLSGFSRPP--SSRSLINHEQGWVTLQ- 290
             + E + FF  TA+ LI +  +   D +      L+  ++      RSLIN     VTL  
Sbjct:   582 NKEILPFFHDTAKELINKSNSLKIDQIELISRCLAIIAKKEHIKKRSLINGLSETVTLNF 641

Query:   291 LTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLN 350
             + ++  +S        V    +++     ++I +I I   DR   + FD+ E +A EL  
Sbjct:   642 INKNRKWSSEADIVYWVNKLSNELNVNTFNKILQIKIDNKDRAS-SFFDINENLA-ELFL 699

Query:   351 KQIPPGNTISKI 362
             +      T+SKI
Sbjct:   700 QNF---KTMSKI 708


>UNIPROTKB|E1C6M6 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0004386
            InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00680000100003
            EMBL:AADN02028008 IPI:IPI00822651 ProteinModelPortal:E1C6M6
            Ensembl:ENSGALT00000040808 OMA:DWLENEA ArrayExpress:E1C6M6
            Uniprot:E1C6M6
        Length = 294

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 112/284 (39%), Positives = 170/284 (59%)

Query:     1 MLAVGFEEDVELIL--------ENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLN-IDLV 51
             ML +GF E VE IL        EN P   Q++LFSAT P WV  +++KY+      +DL+
Sbjct:     1 MLDMGFAEQVEEILGFAYKKGSENSP---QTLLFSATCPRWVYDVAKKYMKGEYEQVDLI 57

Query:    52 GNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTS 110
             G + ++ A  ++  AI   ++ +  +L D+I VY+   G+TIVF +TK++A+E  LAL S
Sbjct:    58 GKKTQRTATTVEHLAIQCRSSQRAEVLGDIIQVYSGSHGRTIVFCETKKEANE--LALNS 115

Query:   111 IIASEA--LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 168
              +  EA  LHGDI Q QRE TL GFR G F VL+AT+VAARGLDIP VDL+I    P D 
Sbjct:   116 ALKQEAQSLHGDIPQKQREVTLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDV 175

Query:   169 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 228
             ++++HRSGRTGRAG+ G  I  +   +   ++ +E+  G  F  +  P   D++++S++ 
Sbjct:   176 DSYIHRSGRTGRAGRTGICICFYQRKEEDLLKQVEQKAGITFRRIGVPSATDIIKASSDD 235

Query:   229 VVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSR 272
                 L+ V P ++++F    +  +EE+  DA +    +  GF +
Sbjct:   236 AKKCLDAVPPSAIDYFRQLPE--LEEQPQDA-SRGPPRFGGFKK 276


>RGD|1310934 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005886
            "plasma membrane" evidence=ISO] InterPro:IPR001650
            InterPro:IPR012562 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 RGD:1310934 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            GO:GO:0004386 eggNOG:COG0513 EMBL:BC091427 IPI:IPI00764536
            UniGene:Rn.98470 SMR:Q5BJM0 Ensembl:ENSRNOT00000057582
            UCSC:RGD:1310934 HOGENOM:HOG000137600 NextBio:677841
            Genevestigator:Q5BJM0 Uniprot:Q5BJM0
        Length = 380

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 120/321 (37%), Positives = 186/321 (57%)

Query:    62 IKLY-AISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHG 119
             I L+ AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       ++ LHG
Sbjct:     4 INLHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG 63

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             DI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++HRSGRTG
Sbjct:    64 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG 123

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 239
             RAG+ G  +  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L  V   
Sbjct:   124 RAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA 183

Query:   240 SVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFS 298
             +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L       
Sbjct:   184 AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQ 242

Query:   299 RGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNT 358
                 + + +   LS     A  ++ ++ ++  +   G  FD+P   ++ L  +       
Sbjct:   243 DVSCAWKELNRKLSS---NAVSQVTRMCLLKGN--MGVCFDVPTSESERLQAEWHDSDWI 297

Query:   359 ISKITKLPALQD--DGPSSDN 377
             +S   KLP +++  DG +S N
Sbjct:   298 LSVPAKLPEIEEYYDGNTSSN 318


>UNIPROTKB|Q5L3G9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
            ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
            KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
            BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
        Length = 467

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 102/278 (36%), Positives = 162/278 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P +RQ++LFSATMP  +++++ ++++ P  + +     E    
Sbjct:   156 MLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAK--EMTVP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ Y +      K  IL+ L+ + A     IVF +TKR  DE++ AL     A+E +HG
Sbjct:   214 NIQQYYLEVHEKKKFDILTRLLDIQAPE-LAIVFGRTKRRVDELAEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+SQ +R   L  F++G   +LVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL-NGVHP 238
             RAGK G A+   T  +   +  +ER    K E + PP +++ LE      +  L N V  
Sbjct:   333 RAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKPPTLDEALEGQQRIAIEKLLNVVET 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ F+   A+ L+EE  +  + AA  ++   +R P +
Sbjct:   393 ENLSFYKRAAEELLEEHDSVTIVAACLKM--LTREPDT 428


>UNIPROTKB|Q73EU1 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
            RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
            DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
            GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
            Uniprot:Q73EU1
        Length = 525

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 96/278 (34%), Positives = 162/278 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P   Q++LFSATMP  +++++ +++  P +I +     E    
Sbjct:   156 MLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HG
Sbjct:   214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL-NGVHP 238
             RAGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L N +  
Sbjct:   333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQNTIEN 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   393 ENLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|A0R8U6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
            "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
            ProteinModelPortal:A0R8U6 STRING:A0R8U6
            EnsemblBacteria:EBBACT00000069056 GeneID:4546566
            GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
        Length = 528

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 95/278 (34%), Positives = 161/278 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P   Q++LFSATMP  +++++ +++  P +I +     E    
Sbjct:   156 MLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HG
Sbjct:   214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 238
             RAGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  
Sbjct:   333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   393 ENLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q63GX5 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
            "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
            ProteinModelPortal:Q63GX5 STRING:Q63GX5
            EnsemblBacteria:EBBACT00000041470 GeneID:3022962
            GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
            BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
        Length = 528

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 95/278 (34%), Positives = 161/278 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P   Q++LFSATMP  +++++ +++  P +I +     E    
Sbjct:   156 MLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HG
Sbjct:   214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 238
             RAGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  
Sbjct:   333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   393 ENLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q6HPE6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:281309 "Bacillus thuringiensis serovar konkukian str.
            97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
            "ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
            ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
            GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
            PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
        Length = 528

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 95/278 (34%), Positives = 161/278 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P   Q++LFSATMP  +++++ +++  P +I +     E    
Sbjct:   156 MLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HG
Sbjct:   214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 238
             RAGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  
Sbjct:   333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   393 ENLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q81IT9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
            STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
            GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
            PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
        Length = 533

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 95/278 (34%), Positives = 161/278 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P   Q++LFSATMP  +++++ +++  P +I +     E    
Sbjct:   156 MLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HG
Sbjct:   214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 238
             RAGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  
Sbjct:   333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   393 ENLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q81VG0 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 95/278 (34%), Positives = 161/278 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P   Q++LFSATMP  +++++ +++  P +I +     E    
Sbjct:   156 MLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HG
Sbjct:   214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 238
             RAGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  
Sbjct:   333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   393 ENLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>TIGR_CMR|BA_0247 [details] [associations]
            symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
            GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 95/278 (34%), Positives = 161/278 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL ++P   Q++LFSATMP  +++++ +++  P +I +     E    
Sbjct:   156 MLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMP 213

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HG
Sbjct:   214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 238
             RAGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  
Sbjct:   333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             E++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   393 ENLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>TIGR_CMR|SO_4034 [details] [associations]
            symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
            acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
            ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
            PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
        Length = 623

 Score = 434 (157.8 bits), Expect = 7.7e-41, P = 7.7e-41
 Identities = 104/280 (37%), Positives = 155/280 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +D+E ILE+ PP+RQ  LFSATMP  +K+++ K+L N  NI +  +      +
Sbjct:   160 MLKMGFIDDIEWILEHTPPQRQLALFSATMPEQIKRVANKHLKNATNISIAASHTT--VD 217

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+   +  +  +K   L  ++ V    G  I+F +T+    E++  L +   AS  LHG
Sbjct:   218 SIEQRFVQVSQHNKLEALVRVLEVENTEG-IIIFVRTRNSCVELAEKLEARGYASSPLHG 276

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q  RER +   + GK  +L+ATDVAARGLD+  +  +++Y++P D E +VHR GRTG
Sbjct:   277 DMNQQARERAVEQLKNGKLDILIATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTG 336

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS----AEQVVATLNG 235
             RAG+ G AIL  TS + R +R++ER    +   +  P  E V E       EQ+  T+N 
Sbjct:   337 RAGRTGMAILFVTSREMRMLRTIERATNSRISPMKVPSPETVAERRLSRLGEQLAQTMNN 396

Query:   236 VHPESVEFFTPTAQRLIE--EKGTDALAAALAQLSGFSRP 273
                  +EF      +L +  E  TD LAAAL       RP
Sbjct:   397 ----DLEFMREAVAQLCQQLEVDTDLLAAALLHQVQQERP 432


>UNIPROTKB|Q4K8U0 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
            GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
            GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
            ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
            Uniprot:Q4K8U0
        Length = 557

 Score = 399 (145.5 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
 Identities = 92/267 (34%), Positives = 160/267 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +D+E+I + +P  RQ++LFSAT+P  ++ ++ ++L +P ++ +        A 
Sbjct:   161 MLKLGFMDDLEVIFKAMPETRQTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTA- 219

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+   +   A  K + +  L+ V       I+F +TK+   +++ AL +    + AL+G
Sbjct:   220 -IEQAHLLVHADQKTSAVLSLLEV-EDFDALIMFVRTKQATLDLASALEAKGYKAAALNG 277

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             DI+Q+QRER ++  + G+  ++VATDVAARGLD+P +  + + ++P DPE++VHR GRTG
Sbjct:   278 DIAQNQRERVIDSLKDGRLDIVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTG 337

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 239
             RAG+EG A+L+ T  +RR ++ +ER  G K   V  P  + VL++  +++  +L+ +  +
Sbjct:   338 RAGREGRALLLVTPRERRMLQVIERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVAD 397

Query:   240 SVEFFTPTAQRLIEEKGTD--ALAAAL 264
             +         RL  + G    ALAAAL
Sbjct:   398 AEATHGDLLDRLTADIGCSPRALAAAL 424

 Score = 50 (22.7 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
 Identities = 19/79 (24%), Positives = 39/79 (49%)

Query:   293 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 352
             R +  +R  ++A++++G + +    A + IG+I +    R   ++ +LPE+    LL K 
Sbjct:   484 RTALGARDGIAAKNLLGAILNEGGLAREAIGRIQV----RDSFSLVELPEDGLDRLLTK- 538

Query:   353 IPPGNTISKITKLPALQDD 371
             +       K  KL   ++D
Sbjct:   539 LKDTRVAGKQLKLRRYRED 557


>UNIPROTKB|Q65N62 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
            EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
            ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
            EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
            GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
            GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
            PATRIC:18946609 ProtClustDB:CLSK886742
            BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
        Length = 487

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 94/278 (33%), Positives = 161/278 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E IL N+P + Q++LFSATMP+ +K+++ +++ NP ++ +     E    
Sbjct:   157 MLNMGFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAK--EMTVS 214

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K   L+ L+ + +     IVF +TKR  DE++ AL      +E +HG
Sbjct:   215 NIQQFYLEVHERKKFDTLTRLLDIQSPE-LAIVFGRTKRRVDELTEALNLRGYTAEGIHG 273

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F+QG   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   274 DLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTG 333

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 239
             RAGK G A+   T  ++  +R++E+    K + +  P +++ +E   +  V  +  +  E
Sbjct:   334 RAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEE 393

Query:   240 S-VEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 276
             + + F+   A  L+E+   D++    A +   ++ P +
Sbjct:   394 NNLNFYMTAAAELLEDH--DSVTVVAAAIKMMTKEPDN 429


>UNIPROTKB|P96614 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
            "response to cold" evidence=IGI] [GO:0010501 "RNA secondary
            structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
            evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
            GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
            EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
            ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
            EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
            PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
            GO:GO:0010501 Uniprot:P96614
        Length = 494

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 95/276 (34%), Positives = 159/276 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +D+E IL N+P + Q++LFSATMP+ +K+++ +++  P ++ +     E    
Sbjct:   157 MLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAK--EMTVS 214

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + +      K   L+ L+ + +     IVF +TKR  DE++ AL     A+E +HG
Sbjct:   215 NIQQFYLEVQERKKFDTLTRLLDIQSPE-LAIVFGRTKRRVDELAEALNLRGYAAEGIHG 273

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTG
Sbjct:   274 DLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTG 333

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 239
             RAGK G A+   T  ++  +R++E+    K + +  P +++ LE   +  V  L     E
Sbjct:   334 RAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVTVERLRTTISE 393

Query:   240 S-VEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPP 274
             + + F+   A  L+E+   DA+    A +   ++ P
Sbjct:   394 NNLNFYMTAAAELLEDH--DAVTVVAAAIKMATKEP 427


>UNIPROTKB|Q3AFI3 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 99/272 (36%), Positives = 160/272 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +D+E IL  L  ++Q++LFSAT+P+ +K + +K+L     + LVG   EK   
Sbjct:   155 MLDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGR--EKTVP 212

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+        T K   L  ++       + IVF +TK+  DEV   L     A++ LHG
Sbjct:   213 AIRQVYYELPETEKIEGLVSILNSELPI-QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHG 271

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+SQ +R +T+  F+ GK  +LVATDVAARGLDIP+V  +I++++P +PE+++HR GRTG
Sbjct:   272 DMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTG 331

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVG--CKFEFVSPPV-VEDV-LESSAEQVVATLNG 235
             RAG+EG AI +    +R+ ++++E  +    K E +  PV +E+   +  A++++ T+  
Sbjct:   332 RAGREGKAITLINYRERKLLKAIEEAINKRLKREILPEPVDLEEARFKKIAKKILDTITK 391

Query:   236 VHPESVEFFTPTAQRLIEEKGTDALAAALAQL 267
               P     +   A RL+EE+ ++ L  A   L
Sbjct:   392 GVPA---LYLEMAARLLEEEESEQLLGATLYL 420


>TIGR_CMR|CHY_0229 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 99/272 (36%), Positives = 160/272 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +D+E IL  L  ++Q++LFSAT+P+ +K + +K+L     + LVG   EK   
Sbjct:   155 MLDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGR--EKTVP 212

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+        T K   L  ++       + IVF +TK+  DEV   L     A++ LHG
Sbjct:   213 AIRQVYYELPETEKIEGLVSILNSELPI-QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHG 271

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+SQ +R +T+  F+ GK  +LVATDVAARGLDIP+V  +I++++P +PE+++HR GRTG
Sbjct:   272 DMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTG 331

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVG--CKFEFVSPPV-VEDV-LESSAEQVVATLNG 235
             RAG+EG AI +    +R+ ++++E  +    K E +  PV +E+   +  A++++ T+  
Sbjct:   332 RAGREGKAITLINYRERKLLKAIEEAINKRLKREILPEPVDLEEARFKKIAKKILDTITK 391

Query:   236 VHPESVEFFTPTAQRLIEEKGTDALAAALAQL 267
               P     +   A RL+EE+ ++ L  A   L
Sbjct:   392 GVPA---LYLEMAARLLEEEESEQLLGATLYL 420


>UNIPROTKB|Q9KLE2 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 400 (145.9 bits), Expect = 1.1e-36, P = 1.1e-36
 Identities = 99/277 (35%), Positives = 158/277 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +DV  I+E  P   Q +LFSATMP  VK++  ++L NP  +D+ G+ ++ +A+
Sbjct:   181 MLKMGFVDDVTWIMEQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGS-NQTVAK 239

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
               + Y +      K   ++ L+    +   +IVF +T++D + ++  L +    + ALHG
Sbjct:   240 VEQQYWV-VKGVEKDEAMARLLET-EETDASIVFVRTRQDTERLADWLCARGFKAAALHG 297

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             DI Q  RERT++  +QG   +LVATDV ARGLD+P +  + +Y++P D E+++HR GRTG
Sbjct:   298 DIPQSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTG 357

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHP- 238
             RAG++G AIL+  ++Q R +R++ER      E +  P  + V ES   ++   L      
Sbjct:   358 RAGRKGKAILLVRTNQIRMLRTIERVTRSSMEEIQLPHRDKVAESRLTKLGQELAADKEF 417

Query:   239 ESVEFFTPTAQRLIEEKGTDA--LAAALAQLSGFSRP 273
              S+E F    ++L      DA  LAA L +     RP
Sbjct:   418 SSLERFADLVEKLQASLEIDATTLAAILLKRQQGKRP 454


>TIGR_CMR|VC_A0804 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 400 (145.9 bits), Expect = 1.1e-36, P = 1.1e-36
 Identities = 99/277 (35%), Positives = 158/277 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +DV  I+E  P   Q +LFSATMP  VK++  ++L NP  +D+ G+ ++ +A+
Sbjct:   181 MLKMGFVDDVTWIMEQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGS-NQTVAK 239

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
               + Y +      K   ++ L+    +   +IVF +T++D + ++  L +    + ALHG
Sbjct:   240 VEQQYWV-VKGVEKDEAMARLLET-EETDASIVFVRTRQDTERLADWLCARGFKAAALHG 297

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             DI Q  RERT++  +QG   +LVATDV ARGLD+P +  + +Y++P D E+++HR GRTG
Sbjct:   298 DIPQSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTG 357

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHP- 238
             RAG++G AIL+  ++Q R +R++ER      E +  P  + V ES   ++   L      
Sbjct:   358 RAGRKGKAILLVRTNQIRMLRTIERVTRSSMEEIQLPHRDKVAESRLTKLGQELAADKEF 417

Query:   239 ESVEFFTPTAQRLIEEKGTDA--LAAALAQLSGFSRP 273
              S+E F    ++L      DA  LAA L +     RP
Sbjct:   418 SSLERFADLVEKLQASLEIDATTLAAILLKRQQGKRP 454


>UNIPROTKB|Q81JK1 [details] [associations]
            symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 85/229 (37%), Positives = 135/229 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDL--VGNQDEKL 58
             ML +GF + VE I++ LP KR +MLFSAT+P  V++LSR Y++ P +I++   G   +K+
Sbjct:   158 MLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKI 217

Query:    59 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
                  L+ +      K ++L D+ T+       I+F +T+ + D V   L  +    + +
Sbjct:   218 EH--TLFEVREE--EKLSLLKDVTTI-ENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKI 272

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HG + Q  R   ++ FR+GKF  LVATDVAARG+DI N+  +I+Y++P + E++VHR+GR
Sbjct:   273 HGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGR 332

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSA 226
             TGRAG  G AI   T  + R +  +E  +G      + P  E+V++  A
Sbjct:   333 TGRAGNSGKAITFITPYEDRFLEEIEAYIGFAIPKANAPSKEEVMKGKA 381


>TIGR_CMR|BA_5703 [details] [associations]
            symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 85/229 (37%), Positives = 135/229 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDL--VGNQDEKL 58
             ML +GF + VE I++ LP KR +MLFSAT+P  V++LSR Y++ P +I++   G   +K+
Sbjct:   158 MLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKI 217

Query:    59 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
                  L+ +      K ++L D+ T+       I+F +T+ + D V   L  +    + +
Sbjct:   218 EH--TLFEVREE--EKLSLLKDVTTI-ENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKI 272

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HG + Q  R   ++ FR+GKF  LVATDVAARG+DI N+  +I+Y++P + E++VHR+GR
Sbjct:   273 HGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGR 332

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSA 226
             TGRAG  G AI   T  + R +  +E  +G      + P  E+V++  A
Sbjct:   333 TGRAGNSGKAITFITPYEDRFLEEIEAYIGFAIPKANAPSKEEVMKGKA 381


>UNIPROTKB|Q11039 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A homolog"
            species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
            GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
            RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
            PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
            EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
            GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
            PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
            ProtClustDB:CLSK791051 Uniprot:Q11039
        Length = 563

 Score = 383 (139.9 bits), Expect = 2.5e-35, P = 2.5e-35
 Identities = 92/256 (35%), Positives = 142/256 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +DVE IL   P  +Q  LFSATMP  ++KLS KYL +P  +         +AE
Sbjct:   168 MLTMGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKT--AVAE 225

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I    I      K   L+ ++ V       IVF +TK+  +E++  L +   ++ A+ G
Sbjct:   226 NISQSYIQVAR--KMDALTRVLEVEPFEAM-IVFVRTKQATEEIAEKLRARGFSAAAISG 282

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q QRERT+   R G   +LVATDVAARGLD+  +  +++Y++P+D E++VHR GRTG
Sbjct:   283 DVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTG 342

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV-LESSAEQVVATLNGVHP 238
             RAG+ G A++  +  +   ++++E+           P VEDV  +  A+   +  N +  
Sbjct:   343 RAGRSGAALIFVSPRELHLLKAIEKATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGG 402

Query:   239 ESVEFFTPTAQRLIEE 254
               +E F    +RL+EE
Sbjct:   403 PGIELF----RRLVEE 414


>TAIR|locus:2084178 [details] [associations]
            symbol:DRH1 "DEAD box RNA helicase 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
            PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
            SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
            EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
            EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
            PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
            RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
            ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
            PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
            EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
            KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
            OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
            Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
        Length = 619

 Score = 383 (139.9 bits), Expect = 5.7e-35, P = 5.7e-35
 Identities = 83/220 (37%), Positives = 125/220 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ +P KRQ+++++AT P  V+K++   L NP  ++ +GN DE +A 
Sbjct:   316 MLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVAN 374

Query:    61 GIKLYAISTTAT-SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHG 119
                   I   A   K+  L  ++     G K I+F  TKR  D+++  LT    + A+HG
Sbjct:   375 KSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHG 434

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D SQ +R+  LN FR G+  VLVATDVAARGLD+ ++  +++Y+ PN  E +VHR GRTG
Sbjct:   435 DKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTG 494

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             RAG  G A   F     +    L + +    + V P + E
Sbjct:   495 RAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIRE 534


>TAIR|locus:2222617 [details] [associations]
            symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
            PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
            Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
            ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
            EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
            OMA:YLIPGFM Uniprot:F4K6V1
        Length = 712

 Score = 383 (139.9 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 84/220 (38%), Positives = 125/220 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I+  +P KRQ+++++AT P  V+K++   L NP  ++ +GN DE +A 
Sbjct:   387 MLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVN-IGNVDELVAN 445

Query:    61 GIKLYAISTTAT-SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHG 119
                   I   A   K + L  ++     G K I+F  TKR  D+++  LT    + A+HG
Sbjct:   446 KSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHG 505

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D SQ +R+  LN FR G+  VLVATDVAARGLD+ ++ ++++Y+ PN  E +VHR GRTG
Sbjct:   506 DKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTG 565

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             RAG  G A   F     +    L + +    + V P V E
Sbjct:   566 RAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVRE 605


>TIGR_CMR|CPS_1726 [details] [associations]
            symbol:CPS_1726 "RNA helicase DeaD" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
            STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
            OMA:WIVKGVE ProtClustDB:CLSK741103
            BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
        Length = 611

 Score = 378 (138.1 bits), Expect = 1.9e-34, P = 1.9e-34
 Identities = 81/205 (39%), Positives = 126/205 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED++ IL+++P   Q  LFSATMP  ++K++ ++L +P +I +   +  K   
Sbjct:   170 MLNMGFLEDIQWILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKA-- 227

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I  YA   +  +K T L  +  V  +    I+F +T+ D  +++  L      + AL+G
Sbjct:   228 NITQYAWKVSGITKMTALERIAEV-VEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNG 286

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q QRER ++  + GK ++LVATDV ARGLDIP + L+I+Y+LP D E +VHR GRTG
Sbjct:   287 DLNQAQRERCIDQMKSGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRIGRTG 346

Query:   180 RAGKEGTAILMFTSSQRRTVRSLER 204
             RAG+EG +I      +  ++R  ER
Sbjct:   347 RAGREGMSIAFVRPREMYSIRHYER 371


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 376 (137.4 bits), Expect = 5.0e-34, P = 5.0e-34
 Identities = 85/209 (40%), Positives = 127/209 (60%)

Query:     1 MLAVGFEEDVELILE--NLPP--KRQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E  ++P    RQ+++FSAT P  ++ L+R +L +   L++  VG+ 
Sbjct:   357 MLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST 416

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LALTSIIA 113
              E + + ++ Y        KR++L D++  +   G T++F +TKR AD +S   +     
Sbjct:   417 SENITQKVE-YVEDH---DKRSVLLDILHTHGTTGLTLIFVETKRMADALSEFLINQRFP 472

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             + A+HGD +Q +RER L  FR G++ +LVAT VAARGLDIPNV  +I+Y+LP D + +VH
Sbjct:   473 ATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVH 532

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGRAG  G A   F    R  VR L
Sbjct:   533 RIGRTGRAGNTGIATAFFNRGNRGVVRDL 561


>TIGR_CMR|SPO_1443 [details] [associations]
            symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
            ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
            PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
        Length = 471

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 83/213 (38%), Positives = 127/213 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLV--GNQDEKL 58
             ML +GF  D+E I    P  RQ++ FSATM   +++++  +L  P  I++       E +
Sbjct:   159 MLDMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETI 218

Query:    59 AEGIKLYAISTT---ATSKRTILSDLITVYAKGGK---TIVFTQTKRDADEVSLALTSII 112
              +G+ L+  S     A+ KR +L  LI   A+G K    I+F   K D D V+ +L    
Sbjct:   219 EQGVVLFKGSRRDREASEKRAVLRALID--AEGEKCTNAIIFCNRKTDVDIVAKSLQKYG 276

Query:   113 ASEA-LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 171
                A +HGD+ Q QR RTL+GFR+GK  +LVA+DVAARGLD+P+V  + ++++P  PE +
Sbjct:   277 YDAAPIHGDLDQSQRTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDY 336

Query:   172 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 204
             VHR GRTGRAG++G AI +      + + ++E+
Sbjct:   337 VHRIGRTGRAGRDGKAITLCIPRDEKALDAIEK 369


>TIGR_CMR|GSU_0914 [details] [associations]
            symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
            GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
            ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
            PATRIC:22024603 ProtClustDB:CLSK924451
            BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
        Length = 447

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 77/212 (36%), Positives = 126/212 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GF  D+  +L++LPP+RQ++LFSATMP  ++ L++  L +P+ +  VG     +  
Sbjct:   156 MFDMGFLPDIRRVLKHLPPRRQTLLFSATMPIDIRTLAQDILVDPVTVQ-VGTVAPAVTV 214

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
                LY +      K  +L +L+  +      ++FT+TK  A  +   L      + +L G
Sbjct:   215 AHALYPVEQHL--KTPLLLELLR-HTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQG 271

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             ++SQ++R+  L+GFR G F +LVATD+AARG+D+  V  +I+Y++P+  E ++HR GRTG
Sbjct:   272 NLSQNRRQAALDGFRDGTFQILVATDIAARGIDVSQVSHVINYDIPDTAEAYIHRIGRTG 331

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 211
             RA + G A  + TS     VR++ER +G   E
Sbjct:   332 RAARSGDAFTLVTSDDGAMVRAIERSLGAPIE 363


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 370 (135.3 bits), Expect = 1.4e-33, P = 1.4e-33
 Identities = 90/233 (38%), Positives = 144/233 (61%)

Query:     1 MLAVGFEEDVELILEN--LPP--KRQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E+  + P  +RQ+++FSAT P+ ++ L+R +L +   L++  VG+ 
Sbjct:   311 MLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGST 370

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSII 112
              E + + + LY  +     K++ L DL++  +  G T++F +TKR AD+++  L + +  
Sbjct:   371 SENITQKV-LYVENQ---DKKSALLDLLSA-STDGLTLIFVETKRMADQLTDFLIMQNFR 425

Query:   113 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 172
             A+ A+HGD +Q +RER L  FR G  T+LVAT VAARGLDIPNV  +I+Y+LP+D + +V
Sbjct:   426 AT-AIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYV 484

Query:   173 HRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 225
             HR GRTGRAG  G A   F S     V+ L  ++  +     P  ++D + S+
Sbjct:   485 HRIGRTGRAGNTGLATAFFNSENSNIVKGLH-EILTEANQEVPSFLKDAMMSA 536


>TAIR|locus:2081061 [details] [associations]
            symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
            evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
            PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
            SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
            UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
            PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
            KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
            HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
            ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
            Uniprot:Q9SQV1
        Length = 1088

 Score = 377 (137.8 bits), Expect = 1.4e-33, P = 1.4e-33
 Identities = 82/222 (36%), Positives = 126/222 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA- 59
             ML +GFE  +  I+  +PP+RQ+++++AT P  V+K++   L NP+ ++ +G  DE  A 
Sbjct:   593 MLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVN-IGRVDELAAN 651

Query:    60 EGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHG 119
             + I  Y        K   L  ++    +G K I+F  TKR  D ++ ++     +  +HG
Sbjct:   652 KAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHG 711

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D +Q +R+  LN FR GK  VL+ATDVAARGLDI ++ ++I+Y+ P   E +VHR GRTG
Sbjct:   712 DKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTG 771

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV 221
             RAG  G A   FT    +    L + +    + V PP V D+
Sbjct:   772 RAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQV-PPQVRDI 812


>TIGR_CMR|VC_2564 [details] [associations]
            symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
            OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
            DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
            Uniprot:Q9KP15
        Length = 460

 Score = 340 (124.7 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
 Identities = 79/243 (32%), Positives = 129/243 (53%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF+E +E I+   P +RQ++LFSAT P+ ++++++    N L I +    D     
Sbjct:   159 MLEMGFQEALEAIIAAAPAERQTLLFSATYPASIEQIAQSVTRNALMIKVEATHD---TS 215

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHG 119
              I+ Y      ++ R    + + ++ +   ++VF  TKR+   V+ AL  S  +   LHG
Sbjct:   216 SIRQYFYKVEGSAARDEALETLLLHHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHG 275

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q +R++ L  F     ++LVATDVAARGLD+ N+D + +Y+L  DPE  VHR GRTG
Sbjct:   276 DMEQRERDQALVQFANKSISILVATDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTG 335

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFE-FVSPPVVEDVLESSAEQVVATLNGVHP 238
             RAG +G A   F+ ++   V  ++  +    E    P         +A  V   ++G   
Sbjct:   336 RAGSKGLAFSFFSDNESYRVAQIDEYMDIAIEPSTLPQPAAGARPYAANMVTIQIDGGKK 395

Query:   239 ESV 241
             + V
Sbjct:   396 DKV 398

 Score = 40 (19.1 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query:   307 VMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNK 351
             ++G L+      A+ IGKI++    R   AV    ++IA + LNK
Sbjct:   403 ILGALTSDGELTAEHIGKINLFPM-RAYVAVH---KKIATKALNK 443


>UNIPROTKB|O05855 [details] [associations]
            symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
            species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
            wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
            GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
            EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
            RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
            EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
            GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
            KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
            TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
            Uniprot:O05855
        Length = 527

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 80/191 (41%), Positives = 115/191 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+E IL  +P  RQSMLFSATMP  +  L+R ++  P +I         + +
Sbjct:   184 MLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHD 243

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
               + +     A  K  ++S ++    +G  T++FT+TKR A +V+  LT    A  A+HG
Sbjct:   244 ATEQFVYRAHALDKVELVSRVLQARDRGA-TMIFTRTKRTAQKVADELTERGFAVGAVHG 302

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q  RE+ L  FR G   VLVATDVAARG+DI +V  +I+Y+ P D + +VHR GRTG
Sbjct:   303 DLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTG 362

Query:   180 RAGKEGTAILM 190
             RAG+ G A+ +
Sbjct:   363 RAGRTGVAVTL 373


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 369 (135.0 bits), Expect = 2.2e-33, P = 2.2e-33
 Identities = 83/205 (40%), Positives = 126/205 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  DV+ +L  LP KRQ++LFSAT  + +  L+ K L NP  I++         E
Sbjct:   165 MLDMGFVHDVKKVLARLPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVT--PPNTTVE 222

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+       A  KR++L+ LITV A   + +VFT+TK  A+ ++  L    +A+ A+HG
Sbjct:   223 RIEQRVFRLAANHKRSLLAHLITVGA-WEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHG 281

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             + SQ+ R + L  F+ G   ++VATD+AARGLDI  +  ++++ELPN  E +VHR GRTG
Sbjct:   282 NKSQNARTKALADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTG 341

Query:   180 RAGKEGTAILMFTSSQRRTVRSLER 204
             RAG+ G AI +    + + ++S+ER
Sbjct:   342 RAGRSGEAISLVAPDEEKLLKSIER 366


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 86/220 (39%), Positives = 127/220 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D++ IL+ +  KRQ++LFSAT  S VKKL+ + +  P  I    ++    A+
Sbjct:   160 MLDMGFSADIQKILQAVNKKRQNLLFSATFSSAVKKLANEMMIKPQVIS--ADKQNTTAD 217

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              +           KR +LS+LI       + +VFT T+  AD +   L    I SE +HG
Sbjct:   218 TVSQVVYPVEQRRKRELLSELIGK-KNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHG 276

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             + +Q  R R L  F  GK  VLVAT+VAARGLDIP+++ +++++LP   E +VHR GRTG
Sbjct:   277 EKAQGSRRRALREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTG 336

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             RAGK G AI   +  + RT+  +E+ +G K   ++ P  E
Sbjct:   337 RAGKSGVAISFVSREEERTLADIEKLIGQKIRRITVPGYE 376


>SGD|S000006040 [details] [associations]
            symbol:DBP1 "Putative ATP-dependent RNA helicase of the
            DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
            SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
            STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
            KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
            NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
            Uniprot:P24784
        Length = 617

 Score = 367 (134.2 bits), Expect = 3.4e-33, P = 3.4e-33
 Identities = 88/210 (41%), Positives = 133/210 (63%)

Query:     1 MLAVGFEEDVELILE--NLPP--KRQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E  ++P    RQ+++FSAT P  ++ L+R +LDN   L++  VG+ 
Sbjct:   323 MLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGST 382

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSII 112
              E + + I LY        K++ L DL++   KG  T++F +TKR AD+++  L + +  
Sbjct:   383 SENITQRI-LYVDDM---DKKSALLDLLSAEHKG-LTLIFVETKRMADQLTDFLIMQNFK 437

Query:   113 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 172
             A+ A+HGD +Q +RER L+ F+     +LVAT VAARGLDIPNV  +I+Y+LP+D + +V
Sbjct:   438 AT-AIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYV 496

Query:   173 HRSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             HR GRTGRAG  G A   F S+ +  V+ L
Sbjct:   497 HRIGRTGRAGNTGVATSFFNSNNQNIVKGL 526


>TIGR_CMR|CPS_1590 [details] [associations]
            symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
            STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
            OMA:AISECGY ProtClustDB:CLSK768209
            BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
        Length = 455

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 92/231 (39%), Positives = 135/231 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+E +L  +  K Q+++FSAT    VK L+ + L +P  I +  +++   + 
Sbjct:   177 MLDMGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISV--SKENTTSG 234

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALH 118
              IK      T   KR +LS+LI V     + +VF  TK  A+ ++  L L  I A+   H
Sbjct:   235 KIKQAVYWVTEERKRELLSELIGVN-NWQQVLVFAGTKESANTLAKELKLDGIKAA-LCH 292

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD +Q  R + L  F +GK  VLVATDVAARGLDIP++  ++++ LP  PE +VHR GRT
Sbjct:   293 GDKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRT 352

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE-DVLESSAEQ 228
             GRAGK GTAI + +    R + ++E+ +  KFE +  P  E + LE+S  Q
Sbjct:   353 GRAGKSGTAISLVSPKDERFLENIEQLIERKFERIVAPGYEFNRLEASEYQ 403


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 83/207 (40%), Positives = 121/207 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+  +L  LP KRQ++LFSAT    +K L+ K L NPL I++   +    ++
Sbjct:   161 MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVA--RRNTASD 218

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGG--KTIVFTQTKRDADEVSLALTSI-IASEAL 117
              +  +        KR +LS +I    KG   + +VFT+TK  A+ ++  L    I S A+
Sbjct:   219 QVTQHVHFVDKKRKRELLSHMI---GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAI 275

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HG+ SQ  R R L  F+ G   VLVATD+AARGLDI  +  +++YELPN PE +VHR GR
Sbjct:   276 HGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGR 335

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLER 204
             TGRA   G A+ +    + + +R +E+
Sbjct:   336 TGRAAATGEALSLVCVDEHKLLRDIEK 362


>UNIPROTKB|Q81QF0 [details] [associations]
            symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 83/227 (36%), Positives = 129/227 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF  D+E IL+  P  +Q+MLFSAT+P  +KKL+++Y+D P  I +    +E   +
Sbjct:   160 MLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQV--QSEEVTVD 217

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA-LHG 119
              I+   I TT  +K   L   +    +    ++F +TK  A ++   L  +  + A LHG
Sbjct:   218 TIEQRVIETTDRAKPDALR-FVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHG 276

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             DI Q +RER +  FR+ K   L+ATDVAARGLD+  V  + +Y++P D E+++HR GRTG
Sbjct:   277 DIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTG 336

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKF--EFVSPPVVEDVLES 224
             RAG  G AI    +   + +  +E+ +G     E +  P ++ V E+
Sbjct:   337 RAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQREIIEQPKIKRVDEN 383


>TIGR_CMR|BA_2475 [details] [associations]
            symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 83/227 (36%), Positives = 129/227 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF  D+E IL+  P  +Q+MLFSAT+P  +KKL+++Y+D P  I +    +E   +
Sbjct:   160 MLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQV--QSEEVTVD 217

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA-LHG 119
              I+   I TT  +K   L   +    +    ++F +TK  A ++   L  +  + A LHG
Sbjct:   218 TIEQRVIETTDRAKPDALR-FVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHG 276

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             DI Q +RER +  FR+ K   L+ATDVAARGLD+  V  + +Y++P D E+++HR GRTG
Sbjct:   277 DIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTG 336

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKF--EFVSPPVVEDVLES 224
             RAG  G AI    +   + +  +E+ +G     E +  P ++ V E+
Sbjct:   337 RAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQREIIEQPKIKRVDEN 383


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 364 (133.2 bits), Expect = 7.0e-33, P = 7.0e-33
 Identities = 86/214 (40%), Positives = 130/214 (60%)

Query:     1 MLAVGFEEDVELILE--NLPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E  ++PP+  RQ+MLFSAT PS +++L+  ++ N   L +  VG+ 
Sbjct:   315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYA----KGGKTIVFTQTKRDADEVS--LAL 108
              + + + ++    S     KR+ L DL+        K   T+VF +TKR AD +   L +
Sbjct:   375 TDLITQRVEFVQES----DKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCM 430

Query:   109 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 168
                 A+ ++HGD +Q +RE  L  F+ G+  +LVATDVAARGLDIP+V  +++++LPND 
Sbjct:   431 NEFPAT-SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDI 489

Query:   169 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             + +VHR GRTGRAGK G A   F  +  +  RSL
Sbjct:   490 DDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 361 (132.1 bits), Expect = 7.4e-33, P = 7.4e-33
 Identities = 78/205 (38%), Positives = 124/205 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ+++FSAT P  V++L+R YL++ + +  VG+ D   + 
Sbjct:   281 MLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVT-VGSLDLAASH 339

Query:    61 GIK-LYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              IK +  +   A  +  +  D+  V   +  K ++FT TKR AD+++  L      + A+
Sbjct:   340 NIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAI 399

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD +Q +R+  LN FR GK  ++VATDVA+RG+D+  +  + +Y+ P + E +VHR GR
Sbjct:   400 HGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGR 459

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             TGRAG +GTA   FTS   +  R L
Sbjct:   460 TGRAGAKGTAYTYFTSDNAKQAREL 484


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 365 (133.5 bits), Expect = 8.2e-33, P = 8.2e-33
 Identities = 86/209 (41%), Positives = 130/209 (62%)

Query:     1 MLAVGFEEDVELILE--NLPP--KRQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E  ++P    RQ+++FSAT P  ++ L+R +L +   L++  VG+ 
Sbjct:   355 MLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST 414

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + I LY        K++++ DL++   + G TIVFT+TKR AD ++  L      
Sbjct:   415 SENITQKI-LYVEDD---EKKSVILDLLSAN-ENGLTIVFTETKRMADNLADYLYDQGFP 469

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             + A+HGD SQ++RE+ L  F+ G   +LVAT VAARGLDIPNV  +I+Y+LP+D + +VH
Sbjct:   470 ATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVH 529

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGRAG  G A   F  + +  V+ L
Sbjct:   530 RIGRTGRAGNVGIATAFFNRNNKNVVKGL 558


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 363 (132.8 bits), Expect = 9.8e-33, P = 9.8e-33
 Identities = 82/205 (40%), Positives = 125/205 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  DV+ +L  LP KRQ++LFSAT    +  L+ K L NP  I++         E
Sbjct:   165 MLDMGFVHDVKKVLARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVT--PPNTTVE 222

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+       A+ KR +L+ LIT  A   + +VFT+TK  A+ ++  L    +++ A+HG
Sbjct:   223 RIEQRVFRLPASHKRALLAHLITAGA-WEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHG 281

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             + SQ+ R + L  F+ G+  +LVATD+AARGLDI  +  ++++ELPN  E +VHR GRTG
Sbjct:   282 NKSQNARTKALADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTG 341

Query:   180 RAGKEGTAILMFTSSQRRTVRSLER 204
             RAG+ G AI +    + + ++S+ER
Sbjct:   342 RAGRSGEAISLVAPDEEKLLKSIER 366


>UNIPROTKB|P0A9P6 [details] [associations]
            symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0000027 "ribosomal large
            subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
            process" evidence=IGI] [GO:0003724 "RNA helicase activity"
            evidence=IDA] [GO:0070417 "cellular response to cold"
            evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
            GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
            RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
            DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
            PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
            EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
            KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
            EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
            BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
            Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
        Length = 629

 Score = 362 (132.5 bits), Expect = 1.3e-32, P = 1.3e-32
 Identities = 94/277 (33%), Positives = 150/277 (54%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF EDVE I+  +P   Q+ LFSATMP  +++++R+++  P  + +  +   +   
Sbjct:   161 MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTR--P 218

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              I     +     K   L   +         I+F +TK    EV+ AL  +   S AL+G
Sbjct:   219 DISQSYWTVWGMRKNEALVRFLEA-EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNG 277

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D++Q  RE+TL   + G+  +L+ATDVAARGLD+  + L+++Y++P D E++VHR GRTG
Sbjct:   278 DMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTG 337

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV----LESSAEQVVATLNG 235
             RAG+ G A+L   + +RR +R++ER +      V  P  E +    LE  A +V   L  
Sbjct:   338 RAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLES 397

Query:   236 VHPES----VEFFTPTAQRLIEEKGTDALAAALAQLS 268
                +     +    PTA+   EE   + LAAAL +++
Sbjct:   398 SDLDQYRALLSKIQPTAEG--EELDLETLAAALLKMA 432


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 79/216 (36%), Positives = 125/216 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF+  +  I+ ++ P RQ++ +SAT P  V++LS+K+L NP  + ++G+ D K   
Sbjct:   258 MLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKV-IIGSSDLKANR 316

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+      + + K   L  L+     G + +VF  TK+  D+++  L      + ++HG
Sbjct:   317 AIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHG 376

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D SQ +R+  L+ FR GK  ++ ATDVAARGLD+ +V  +I+Y+ P   E +VHR GRTG
Sbjct:   377 DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTG 436

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSP 215
             RAG +GTA   FT +  R  + L   +    + VSP
Sbjct:   437 RAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSP 472


>UNIPROTKB|F1NJ30 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR012562 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 GO:GO:0004386 GeneTree:ENSGT00680000100003
            EMBL:AADN02028008 IPI:IPI00593310 ProteinModelPortal:F1NJ30
            Ensembl:ENSGALT00000040804 ArrayExpress:F1NJ30 Uniprot:F1NJ30
        Length = 271

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 72/161 (44%), Positives = 104/161 (64%)

Query:   132 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 191
             GFR G F VL+AT+VAARGLDIP VDL+I    P D ++++HRSGRTGRAG+ G  I  +
Sbjct:     2 GFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICFY 61

Query:   192 TSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRL 251
                +   ++ +E+  G  F  +  P   D++++S++     L+ V P ++++F  +A+ L
Sbjct:    62 QRKEEDLLKQVEQKAGITFRRIGVPSATDIIKASSDDAKKCLDAVPPSAIDYFRQSAREL 121

Query:   252 IEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 291
             IEEKG  DALAAALA +SG S     RSL+N   G+VT+ L
Sbjct:   122 IEEKGAVDALAAALAHISGASSI-QQRSLLNSTAGFVTMVL 161


>TAIR|locus:2162022 [details] [associations]
            symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
            EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
            IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
            UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
            PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
            KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
            OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
            Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
        Length = 591

 Score = 357 (130.7 bits), Expect = 3.5e-32, P = 3.5e-32
 Identities = 79/226 (34%), Positives = 127/226 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I+  + P RQ++L+SAT P  V+ L+R++L +P    ++G+ D K  +
Sbjct:   324 MLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKA-IIGSTDLKANQ 382

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I           K   L  L+     G K ++F +TKR  D+V+  L      + A+HG
Sbjct:   383 SINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHG 442

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D +Q +R+R L  F+ G+  ++ ATDVAARGLD+ ++  +++Y+ PN  E ++HR GRTG
Sbjct:   443 DKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTG 502

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 225
             RAG +G A   FT    +  R L + +    + V PP +  ++ SS
Sbjct:   503 RAGAKGMAFTFFTHDNAKFARELVKILQEAGQVV-PPTLSALVRSS 547


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 353 (129.3 bits), Expect = 3.8e-32, P = 3.8e-32
 Identities = 86/231 (37%), Positives = 133/231 (57%)

Query:     1 MLAVGFEEDVE-LILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 59
             ML  GFEED++ +I E    KRQ+++F+AT P  V++L+  +++NP+ +  +GN D+  A
Sbjct:   267 MLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVS-IGNTDQLTA 325

Query:    60 EG--IKLYAISTTATSKRTILSDLITVYAKGGK----TIVFTQTKRDADEVSLALT-SII 112
                  ++  +      +R +L +L+  Y  G K     ++F   K++A  V   L  +  
Sbjct:   326 NKRITQIVEVVDPRGKERKLL-ELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGY 384

Query:   113 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 172
                A+HGD+SQ QR + LN F+ GK  +L+ATDVAARGLDIPNV  +I+   P   E +V
Sbjct:   385 NVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYV 444

Query:   173 HRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLE 223
             HR GRTGRAG+ GTA  +FT  ++     L   +       + PV ED+++
Sbjct:   445 HRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNG----ANQPVPEDLIK 491


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 83/210 (39%), Positives = 120/210 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF   +  I +N+P KRQ++ FSATMP  V+ L+  +L NP  + +        A 
Sbjct:   166 MLDLGFIHALRAIAKNVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVA--PPATTAG 223

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+          K ++L + I    +    IVFT+TK  AD V   L    I S A+HG
Sbjct:   224 RIEQRVCFVEQPEKASLLIEKIRD-PELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHG 282

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             + SQ QRE+ L  F+ G+  +LVATD+AARG+ +  +  +I+Y+LP+ PE FVHR GRT 
Sbjct:   283 NKSQSQREKALEAFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTA 342

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCK 209
             RAG  G AI   +  +R T+R++E+  G K
Sbjct:   343 RAGNSGVAISFCSRDERPTLRAIEKLTGLK 372


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 77/205 (37%), Positives = 127/205 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF+E+++ I + LP  +Q++LFSAT    + K+S+  L  P  +++  ++  K A+
Sbjct:   162 MLDMGFKEEIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEPKMVEI--DEKNKAAD 219

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALH 118
              ++       A  KR + S LI   ++  K + VFT+TK+ AD+++  +T   + S A+H
Sbjct:   220 DVEQLVYGVDADRKRELTSFLIG--SRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIH 277

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD SQ  RE+ L+ F++GK   L+ATDVAARG+DI  +  +I+YELP + E +VHR GRT
Sbjct:   278 GDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRT 337

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
              RAG  G A+ + +  +   + ++E
Sbjct:   338 ARAGNSGLAVSLVSPGEEWLLTAIE 362


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 77/205 (37%), Positives = 127/205 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF+E+++ I + LP  +Q++LFSAT    + K+S+  L  P  +++  ++  K A+
Sbjct:   162 MLDMGFKEEIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEPKMVEI--DEKNKAAD 219

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALH 118
              ++       A  KR + S LI   ++  K + VFT+TK+ AD+++  +T   + S A+H
Sbjct:   220 DVEQLVYGVDADRKRELTSFLIG--SRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIH 277

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD SQ  RE+ L+ F++GK   L+ATDVAARG+DI  +  +I+YELP + E +VHR GRT
Sbjct:   278 GDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRT 337

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
              RAG  G A+ + +  +   + ++E
Sbjct:   338 ARAGNSGLAVSLVSPGEEWLLTAIE 362


>ASPGD|ASPL0000006660 [details] [associations]
            symbol:AN5931 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
            EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
            ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
            EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
            OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
        Length = 563

 Score = 353 (129.3 bits), Expect = 7.3e-32, P = 7.3e-32
 Identities = 78/224 (34%), Positives = 132/224 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I+  + P RQ+ ++SAT P  V++L+  +L+N + ++ +G+ D     
Sbjct:   299 MLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVN-IGSMDLSANH 357

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  + +    +  ++  L  +   +G K +VFT TKR ADE++  L      + ++
Sbjct:   358 RITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSI 417

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD  Q +R+  LN F+ GK  ++VATDVA+RG+D+ ++  +I+Y+ PN+ E +VHR GR
Sbjct:   418 HGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGR 477

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV 221
             TGRAG +GTAI  FT+   +  R L   +    + + P + E V
Sbjct:   478 TGRAGAKGTAITFFTTDNAKQARDLVTILSEAKQQIDPRLAEMV 521


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 354 (129.7 bits), Expect = 9.6e-32, P = 9.6e-32
 Identities = 83/229 (36%), Positives = 129/229 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  IL ++ P RQ+++ SAT P  +++L+  YL  P+ +  VG  D    +
Sbjct:   374 MLDLGFEHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLV-YVGTLDLVAVD 432

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              +K   I TT   KR++  + +   +   K IVF   K  AD++S  L+   I  ++LHG
Sbjct:   433 TVKQNIIITTEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHG 492

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D  Q  RER L+ F+ GK  +L+ATD+A+RGLD+ +V  + +Y  P + E +VHR GRTG
Sbjct:   493 DREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTG 552

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 228
             RAGK G ++ + T    +    L   +    +  +  + ED+L S AEQ
Sbjct:   553 RAGKMGESVTLMTQDDWKVAGELIEIL----QRANQSIPEDLL-SMAEQ 596


>TIGR_CMR|GSU_0491 [details] [associations]
            symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
            KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
            BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
        Length = 450

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 80/208 (38%), Positives = 126/208 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +DV+ I    P  RQ++LF+ATM S + +L+ + L  P  ID+ G +      
Sbjct:   159 MLDMGFSDDVDRIAAASPATRQTLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHI 218

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
               +L+ ++     K  +L  LIT  +   + I+F+ TKRDA+ ++L L +   ++ ALHG
Sbjct:   219 EQRLH-VADDLHHKNRLLRHLITDESLR-RAIIFSATKRDAENLALELKAQGHSAAALHG 276

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q+ R RT+   +QG+  +LVATDVAARGLD+  +  +I+++LP   E +VHR GRTG
Sbjct:   277 DMPQNARNRTIAAMKQGRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTG 336

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVG 207
             RAG  G AI   + ++   +  +ER +G
Sbjct:   337 RAGASGIAISFASLNEVNYLARIERYIG 364


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 354 (129.7 bits), Expect = 1.0e-31, P = 1.0e-31
 Identities = 83/229 (36%), Positives = 129/229 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  IL ++ P RQ+++ SAT P  +++L+  YL  P+ +  VG  D    +
Sbjct:   383 MLDLGFEHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLV-YVGTLDLVAVD 441

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              +K   I TT   KR++  + +   +   K IVF   K  AD++S  L+   I  ++LHG
Sbjct:   442 TVKQNIIITTEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHG 501

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D  Q  RER L+ F+ GK  +L+ATD+A+RGLD+ +V  + +Y  P + E +VHR GRTG
Sbjct:   502 DREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTG 561

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 228
             RAGK G ++ + T    +    L   +    +  +  + ED+L S AEQ
Sbjct:   562 RAGKMGESVTLMTQDDWKVAGELIEIL----QRANQSIPEDLL-SMAEQ 605


>UNIPROTKB|Q485I3 [details] [associations]
            symbol:dbpA "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 318 (117.0 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 73/204 (35%), Positives = 114/204 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF+  ++ I+   P  RQ++LFSAT P  +K +S   + +P+ + +  ++D+    
Sbjct:   165 MLEMGFQAALDNIVGRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTIS 224

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
               K + +       R     L+ +  +   T +F  TK++  +V+ AL     +  ALHG
Sbjct:   225 Q-KFFKVGND--DDRLDALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHG 281

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q  R++TL  F     ++LVATDVAARGLDI ++DL+I+Y +  D E  VHR GRTG
Sbjct:   282 DLEQRDRDQTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTG 341

Query:   180 RAGKEGTAILMFTSSQRRTVRSLE 203
             RAG  G A  +F+  +   V  LE
Sbjct:   342 RAGSTGIAYSLFSDKESYKVGLLE 365

 Score = 45 (20.9 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 16/88 (18%), Positives = 40/88 (45%)

Query:   273 PPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDR 332
             P  S +++++E+    +   +     +  + A  ++G L+        ++GKI ++ D++
Sbjct:   376 PLPSLAVLSNERPQAKMATIQIDGGKKQKVRAGDILGALTGDNGVQGSQVGKISVL-DNK 434

Query:   333 VQGAVFDLPEEIAKELLNKQIPPGNTIS 360
                AV      +A + ++K    G T +
Sbjct:   435 AYVAVTKAALNLALKKISKGKMKGRTFN 462


>TIGR_CMR|CPS_1540 [details] [associations]
            symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 318 (117.0 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 73/204 (35%), Positives = 114/204 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF+  ++ I+   P  RQ++LFSAT P  +K +S   + +P+ + +  ++D+    
Sbjct:   165 MLEMGFQAALDNIVGRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTIS 224

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
               K + +       R     L+ +  +   T +F  TK++  +V+ AL     +  ALHG
Sbjct:   225 Q-KFFKVGND--DDRLDALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHG 281

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q  R++TL  F     ++LVATDVAARGLDI ++DL+I+Y +  D E  VHR GRTG
Sbjct:   282 DLEQRDRDQTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTG 341

Query:   180 RAGKEGTAILMFTSSQRRTVRSLE 203
             RAG  G A  +F+  +   V  LE
Sbjct:   342 RAGSTGIAYSLFSDKESYKVGLLE 365

 Score = 45 (20.9 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 16/88 (18%), Positives = 40/88 (45%)

Query:   273 PPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDR 332
             P  S +++++E+    +   +     +  + A  ++G L+        ++GKI ++ D++
Sbjct:   376 PLPSLAVLSNERPQAKMATIQIDGGKKQKVRAGDILGALTGDNGVQGSQVGKISVL-DNK 434

Query:   333 VQGAVFDLPEEIAKELLNKQIPPGNTIS 360
                AV      +A + ++K    G T +
Sbjct:   435 AYVAVTKAALNLALKKISKGKMKGRTFN 462


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 350 (128.3 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 74/200 (37%), Positives = 124/200 (62%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+R YL++P+ +  +G+ +   + 
Sbjct:   286 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVT-IGSLELAASH 344

Query:    61 GI-KLYAISTTATSKRTILSDLITVY-AKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I +L  +    + +  ++  L +    K  K +VF  TKR  DE++  L S    + A+
Sbjct:   345 TITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAI 404

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD  Q++R+  L+ FR+GK +++VATDVAARG+D+  +  +I+Y++P + E +VHR GR
Sbjct:   405 HGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGR 464

Query:   178 TGRAGKEGTAILMFTSSQRR 197
             TGR G  GTAI  FT    +
Sbjct:   465 TGRGGASGTAISFFTEGNSK 484


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 353 (129.3 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 84/209 (40%), Positives = 118/209 (56%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   352 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 411

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   412 SENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 467

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   468 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 527

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   528 RIGRTGRVGNLGLATSFFNERNANITKDL 556


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 86/206 (41%), Positives = 125/206 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+  IL+ LP  RQ++LFSAT    +K+L+ K L +P  I+ V  ++   A 
Sbjct:   172 MLDMGFLPDIRRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIE-VARRNTAAAR 230

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALH 118
              I           KR +LS +I   +K  + + VFT+TK  A+ +S  L S  ++S A+H
Sbjct:   231 -ITHVVHPVDRQRKRELLSFMIG--SKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIH 287

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G+ SQ  R R L  F+QGK  VLVATDVAARGLDI  +  +I++ELP+  + +VHR GRT
Sbjct:   288 GNKSQAARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRT 347

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GRA  +G AI + +  + R +R +E+
Sbjct:   348 GRASNDGVAISLVSGDEVRLLRDIEK 373


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 86/206 (41%), Positives = 125/206 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+  IL+ LP  RQ++LFSAT    +K+L+ K L +P  I+ V  ++   A 
Sbjct:   172 MLDMGFLPDIRRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIE-VARRNTAAAR 230

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALH 118
              I           KR +LS +I   +K  + + VFT+TK  A+ +S  L S  ++S A+H
Sbjct:   231 -ITHVVHPVDRQRKRELLSFMIG--SKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIH 287

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G+ SQ  R R L  F+QGK  VLVATDVAARGLDI  +  +I++ELP+  + +VHR GRT
Sbjct:   288 GNKSQAARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRT 347

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GRA  +G AI + +  + R +R +E+
Sbjct:   348 GRASNDGVAISLVSGDEVRLLRDIEK 373


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 352 (129.0 bits), Expect = 1.7e-31, P = 1.7e-31
 Identities = 78/209 (37%), Positives = 125/209 (59%)

Query:     1 MLAVGFEEDVELILENLP----PKRQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E        +RQ+++FSAT P  ++ L+R +L +   L++  VG+ 
Sbjct:   341 MLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGST 400

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LALTSIIA 113
              E + + +    +    + KR+ L D++      G T++F +TKR AD ++   L S   
Sbjct:   401 SENITQKV----VHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFP 456

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
             + ++HGD +Q +RER L  FR G+ +++VAT VA+RGLDIPNV  +I+Y+LP D + +VH
Sbjct:   457 ATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVH 516

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGRAG  G A+  F  + +   + L
Sbjct:   517 RIGRTGRAGNTGQAVAFFNRNNKGIAKEL 545


>TIGR_CMR|CPS_2658 [details] [associations]
            symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
            ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
            PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
            Uniprot:Q480Z7
        Length = 399

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 78/208 (37%), Positives = 118/208 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +DV+ I+  LP  RQ++LFSATMP+ ++ L+   L +P  I +          
Sbjct:   161 MLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLV 220

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
                +Y +  +  +K  +L +++T  A   K ++F +TK  AD +  AL    I + +LH 
Sbjct:   221 NQSVYHLDKS--NKVPLLFNILTK-ADYEKVLIFCKTKYGADIIVKALEKASITAASLHS 277

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
               +Q  RE  L  F+     VLVATDVAARG+D+ N+ L+I+Y LP DP  ++HR GRT 
Sbjct:   278 GKTQAVREEALQNFKDSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTA 337

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVG 207
             RAGK G AI     +  R + ++E  +G
Sbjct:   338 RAGKSGMAISFAVENDIRQLTNIENSIG 365


>TIGR_CMR|SO_3783 [details] [associations]
            symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
            KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
            Uniprot:Q8EAV8
        Length = 535

 Score = 347 (127.2 bits), Expect = 2.4e-31, P = 2.4e-31
 Identities = 75/205 (36%), Positives = 125/205 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D++ IL  LP KRQ+++FSAT    +++L++  +++P+ I +        A 
Sbjct:   159 MLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRN--AAAT 216

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              +K +      T K  +L  LI       + +VF++TK  A+ ++ +L    I++ A+HG
Sbjct:   217 TVKQWICPVDKTQKSALLIQLIK-QENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHG 275

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             + SQ  R + L  F+ G+  VLVATD+AARGLDI  +  +++++LPN PE +VHR GRTG
Sbjct:   276 NKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTG 335

Query:   180 RAGKEGTAILMFTSSQRRTVRSLER 204
             RAG  G A+ + +S + + ++ +ER
Sbjct:   336 RAGATGQAVSLVSSEEIKLLKDIER 360


>UNIPROTKB|Q8ECL2 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 69/196 (35%), Positives = 120/196 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML++GF E++E +L  LP ++Q++LFSAT P  V+ L+ K L  PL   L   Q+  + +
Sbjct:   171 MLSLGFTEELEQVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIEQ 230

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              +    I+     K  +L+ LI  + +  + ++F   K   + ++  L+   I++E  HG
Sbjct:   231 RV----ITVNREQKTALLAHLIKQH-QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHG 285

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D +Q  R R L+GF+ G+ +VL+ATD+AARG+DI  + ++I+++LP  P  ++HR GR+G
Sbjct:   286 DKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSG 345

Query:   180 RAGKEGTAILMFTSSQ 195
             RAG+ G A+ + +  +
Sbjct:   346 RAGEAGLAVTLISHEE 361


>TIGR_CMR|SO_3125 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 69/196 (35%), Positives = 120/196 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML++GF E++E +L  LP ++Q++LFSAT P  V+ L+ K L  PL   L   Q+  + +
Sbjct:   171 MLSLGFTEELEQVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIEQ 230

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              +    I+     K  +L+ LI  + +  + ++F   K   + ++  L+   I++E  HG
Sbjct:   231 RV----ITVNREQKTALLAHLIKQH-QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHG 285

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D +Q  R R L+GF+ G+ +VL+ATD+AARG+DI  + ++I+++LP  P  ++HR GR+G
Sbjct:   286 DKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSG 345

Query:   180 RAGKEGTAILMFTSSQ 195
             RAG+ G A+ + +  +
Sbjct:   346 RAGEAGLAVTLISHEE 361


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 351 (128.6 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 84/209 (40%), Positives = 118/209 (56%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   351 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 410

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   411 SENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 466

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   467 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 526

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   527 RIGRTGRVGNLGLATSFFNERNINITKDL 555


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 351 (128.6 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 84/209 (40%), Positives = 118/209 (56%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   352 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 411

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   412 SENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 467

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   468 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 527

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   528 RIGRTGRVGNLGLATSFFNERNINITKDL 556


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 351 (128.6 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 84/209 (40%), Positives = 118/209 (56%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   352 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 411

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   412 SENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 467

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   468 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 527

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   528 RIGRTGRVGNLGLATSFFNERNINITKDL 556


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 352 (129.0 bits), Expect = 2.7e-31, P = 2.7e-31
 Identities = 80/230 (34%), Positives = 130/230 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I+  + P RQ++++SAT P  VK+L+  +L N + I+ +G+ +     
Sbjct:   440 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQIN-IGSLELSANH 498

Query:    61 GIKLYAISTTATSK----RTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASE 115
              I+         SK    +T+LSD+       GK I+F +TKR  D +   + S  +   
Sbjct:   499 NIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCG 558

Query:   116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 175
             A+HGD SQ +R+  L  FR GK  +LVATDVAARGLD+  +  +I+++ P + E ++HR 
Sbjct:   559 AIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRI 618

Query:   176 GRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 225
             GRTGR+  +GT+   FT +  +  ++L  DV  +      P +E++  +S
Sbjct:   619 GRTGRSNTKGTSFAFFTKNNAKQAKALV-DVLREANQEINPALENLARNS 667


>SGD|S000001107 [details] [associations]
            symbol:RRP3 "Protein involved in rRNA processing"
            species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
            SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
            LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
            evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
            GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
            RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
            DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
            PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
            KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
            GermOnline:YHR065C Uniprot:P38712
        Length = 501

 Score = 343 (125.8 bits), Expect = 3.6e-31, P = 3.6e-31
 Identities = 87/250 (34%), Positives = 150/250 (60%)

Query:     1 MLAVGFEEDVELILENLPPK-RQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 59
             +L + F   ++ IL+ +P + R + LFSATM S + KL R  L NP+    V N+ + + 
Sbjct:   236 LLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKC-AVSNKYQTVD 294

Query:    60 EGIKLYAISTTATSKRTILSDLITVYAKGGKT-IVFTQTKRDADEVSLALTSII--ASEA 116
               ++   +      K T L  L+  +   GKT I+FT+TK +A+ +S  L +++  ++ A
Sbjct:   295 TLVQTLMV-VPGGLKNTYLIYLLNEFI--GKTMIIFTRTKANAERLS-GLCNLLEFSATA 350

Query:   117 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSG 176
             LHGD++Q+QR  +L+ F+ GK ++LVATDVAARGLDIP+VD++++Y++P D ++++HR G
Sbjct:   351 LHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVG 410

Query:   177 RTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF--EFVSPPVV---EDVLESSAEQVVA 231
             RT RAG+ G +I + +      +  +E  +G K   E V   ++    D ++ +  +VV 
Sbjct:   411 RTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVM 470

Query:   232 TLNGVHPESV 241
              +N  + E +
Sbjct:   471 EMNRRNKEKI 480


>SGD|S000005056 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
            protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
            "nuclear polyadenylation-dependent mRNA catabolic process"
            evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
            RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
            SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
            STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
            GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
            CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
            Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
        Length = 546

 Score = 346 (126.9 bits), Expect = 3.6e-31, P = 3.6e-31
 Identities = 73/199 (36%), Positives = 119/199 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  VK+L+  YL++P+ +  VG+ +   + 
Sbjct:   272 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQ-VGSLELSASH 330

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGG--KTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I       +   KR  L+  +   ++    KT++F  TKR  D+++  L      + A+
Sbjct:   331 NITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAI 390

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD  Q +R+  L  FR G+  ++VATDVAARG+D+  ++ +I+Y++P + E +VHR GR
Sbjct:   391 HGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGR 450

Query:   178 TGRAGKEGTAILMFTSSQR 196
             TGRAG  GTAI  FT   +
Sbjct:   451 TGRAGATGTAISFFTEQNK 469


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 349 (127.9 bits), Expect = 3.7e-31, P = 3.7e-31
 Identities = 85/216 (39%), Positives = 128/216 (59%)

Query:     1 MLAVGFEEDVELILE--NLPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E  ++PP+  RQ++LFSAT P  +++L+  +L N   L +  VG+ 
Sbjct:   323 MLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSS 382

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGG---K---TIVFTQTKRDADEVS--L 106
              + + + ++    S     KR+ L DL+    + G   K   T+VF +TKR AD +   L
Sbjct:   383 TDLIVQRVEFVLDS----DKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWL 438

Query:   107 ALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN 166
              +    A+ ++HGD +Q +RE  L  F+ G+  +LVATDVAARGLDIP+V  +++++LPN
Sbjct:   439 CINGFPAT-SIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPN 497

Query:   167 DPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             D + +VHR GRTGRAGK G A   F        R L
Sbjct:   498 DIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPL 533


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 73/204 (35%), Positives = 122/204 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ++++ +L+ +P +RQ++LFSAT+   +   S+  L +P  I++          
Sbjct:   161 MLDMGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQI 220

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
               ++YAI +    K   +S L+       + ++F++TK+  D+++  L  + +A+++ HG
Sbjct:   221 EQRVYAIDSDR--KTEFVSHLVRS-KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHG 277

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+SQ  RE+ L  F+QG   VLVATDVAARGLDI  +  +I++ELP   E ++HR GRTG
Sbjct:   278 DLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTG 337

Query:   180 RAGKEGTAILMFTSSQRRTVRSLE 203
             RAG  G AI +F+      +  +E
Sbjct:   338 RAGSAGLAITLFSQEDALLLEEVE 361


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 73/204 (35%), Positives = 122/204 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ++++ +L+ +P +RQ++LFSAT+   +   S+  L +P  I++          
Sbjct:   161 MLDMGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQI 220

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
               ++YAI +    K   +S L+       + ++F++TK+  D+++  L  + +A+++ HG
Sbjct:   221 EQRVYAIDSDR--KTEFVSHLVRS-KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHG 277

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+SQ  RE+ L  F+QG   VLVATDVAARGLDI  +  +I++ELP   E ++HR GRTG
Sbjct:   278 DLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTG 337

Query:   180 RAGKEGTAILMFTSSQRRTVRSLE 203
             RAG  G AI +F+      +  +E
Sbjct:   338 RAGSAGLAITLFSQEDALLLEEVE 361


>MGI|MGI:1349406 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
            CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
            RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
            SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
            PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
            InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
            GermOnline:ENSMUSG00000069045 Uniprot:Q62095
        Length = 658

 Score = 349 (127.9 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 82/209 (39%), Positives = 117/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   351 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 410

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALTSIIA 113
              E + + +    +      KR+ L DL+    K   T+VF +TK+ AD + +       A
Sbjct:   411 SENITQKV----VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYA 466

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR G+  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   467 CTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 526

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   527 RIGRTGRVGNLGLATSFFNERNLNITKDL 555


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 349 (127.9 bits), Expect = 4.3e-31, P = 4.3e-31
 Identities = 84/209 (40%), Positives = 117/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   352 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 411

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   412 SENITQKV----VWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 467

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   468 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 527

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   528 RIGRTGRVGNLGLATSFFNERNINITKDL 556


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 349 (127.9 bits), Expect = 4.3e-31, P = 4.3e-31
 Identities = 84/209 (40%), Positives = 117/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   352 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 411

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   412 SENITQKV----VWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 467

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   468 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 527

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   528 RIGRTGRVGNLGLATSFFNERNINITKDL 556


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 348 (127.6 bits), Expect = 4.8e-31, P = 4.8e-31
 Identities = 84/209 (40%), Positives = 117/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   329 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 388

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   389 SENITQKV----VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYA 444

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   445 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 504

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   505 RIGRTGRVGNLGLATSFFNERNINITKDL 533


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 348 (127.6 bits), Expect = 4.9e-31, P = 4.9e-31
 Identities = 84/209 (40%), Positives = 117/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   330 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 389

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   390 SENITQKV----VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYA 445

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   446 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 505

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   506 RIGRTGRVGNLGLATSFFNERNINITKDL 534


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 349 (127.9 bits), Expect = 4.9e-31, P = 4.9e-31
 Identities = 83/209 (39%), Positives = 119/209 (56%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  RQ+M+FSAT P  ++ L+R +L++   L +  VG+ 
Sbjct:   384 MLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGST 443

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIA 113
              E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   444 SENITQKV----VWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYA 499

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR G+  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   500 CTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 559

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   560 RIGRTGRVGNLGLATSFFNDKNGNITKDL 588


>UNIPROTKB|B4E132 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
            HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
            ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
            Ensembl:ENST00000420730 Uniprot:B4E132
        Length = 407

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 82/209 (39%), Positives = 116/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:    97 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 156

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L D++        T+VF +TK+ AD +   L     A
Sbjct:   157 SENITQKV----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYA 212

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   213 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVH 272

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   273 RIGRTGRVGNLGLATSFFNEKNMNITKDL 301


>UNIPROTKB|P21693 [details] [associations]
            symbol:dbpA species:83333 "Escherichia coli K-12"
            [GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
            activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
            [GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
            evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
            "ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
            GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
            ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
            EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
            GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
            PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
            HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
            BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
            BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
            GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
        Length = 457

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 80/236 (33%), Positives = 128/236 (54%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF + ++ ++   P  RQ++LFSAT P  +  +S +   +PL I++  +  + L  
Sbjct:   158 MLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEI--DSTDALPP 215

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASE-ALHG 119
              I+     T++  K  +L  L++++ +    +VF  TK+D   V  AL  +  S  +LHG
Sbjct:   216 -IEQQFYETSSKGKIPLLQRLLSLH-QPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHG 273

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q  R++TL  F  G   VLVATDVAARGLDI +++L++++EL  DPE  VHR GRT 
Sbjct:   274 DLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTA 333

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG 235
             RAG  G AI      + +    +   +  K  + +PP    +    AE     ++G
Sbjct:   334 RAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDG 389


>TIGR_CMR|BA_4509 [details] [associations]
            symbol:BA_4509 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268806 OMA:YAHVEPK HSSP:P10081
            RefSeq:NP_846734.1 RefSeq:YP_021153.1 RefSeq:YP_030436.1
            ProteinModelPortal:Q81LV0 SMR:Q81LV0
            EnsemblBacteria:EBBACT00000013143 EnsemblBacteria:EBBACT00000016547
            EnsemblBacteria:EBBACT00000022918 GeneID:1088235 GeneID:2818505
            GeneID:2850064 KEGG:ban:BA_4509 KEGG:bar:GBAA_4509 KEGG:bat:BAS4187
            ProtClustDB:CLSK887589 BioCyc:BANT260799:GJAJ-4244-MONOMER
            BioCyc:BANT261594:GJ7F-4386-MONOMER Uniprot:Q81LV0
        Length = 436

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 75/214 (35%), Positives = 125/214 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  DV+ I   +P   Q ++FSAT+P  +K   +KY++NP +I +  N  +  A 
Sbjct:   162 MLDMGFIHDVDKIAARMPKNLQMLVFSATIPQKLKPFLKKYMENPEHIHI--NPKQVAAG 219

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ Y + +   +K  +++ ++  + K    +VFT TK+ AD+V+  L    +    +HG
Sbjct:   220 NIEHYLVPSKHRNKIDLVNKMLLQF-KPYLAVVFTNTKKMADQVADGLMERGLKVGRIHG 278

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+S   R++ +   R  +F  +VATD+AARG+DI  +  +I+YELP+D + FVHR GRT 
Sbjct:   279 DLSPRDRKKMMKQIRDLEFQYIVATDLAARGIDIEGISHVINYELPSDLDFFVHRVGRTA 338

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFV 213
             RAG  G A+ ++  +    + SLE+    +F+ V
Sbjct:   339 RAGHSGIAVTIYDPANEEALDSLEKQRHIEFKHV 372


>RGD|2314437 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
            species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
            EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
            UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
            GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
        Length = 652

 Score = 346 (126.9 bits), Expect = 8.7e-31, P = 8.7e-31
 Identities = 81/209 (38%), Positives = 117/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   345 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 404

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALTSIIA 113
              E + + +    +      KR+ L DL+    +   T+VF +TK+ AD + +       A
Sbjct:   405 SENITQKV----VWVEELDKRSFLLDLLNATGRDSLTLVFVETKKGADSLENFLFQERYA 460

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR G+  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   461 CTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 520

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   521 RIGRTGRVGNLGLATSFFNERNLNITKDL 549


>UNIPROTKB|F1NTS2 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
            EMBL:AADN02041230 ProteinModelPortal:F1NTS2
            Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
            Uniprot:F1NTS2
        Length = 414

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   195 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 252

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   253 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 311

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   312 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 371

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   372 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 414


>UNIPROTKB|Q5ZM36 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
            RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
            SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
            InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
        Length = 412

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   193 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 250

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   251 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 309

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   310 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 369

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   370 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 412


>UNIPROTKB|Q2NL22 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
            GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
            GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
            GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
            IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
            ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
            Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
            InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
            Uniprot:Q2NL22
        Length = 411

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 249

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   250 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 308

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   309 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 368

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   369 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|E2RDZ4 [details] [associations]
            symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
            "negative regulation of translation" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
            EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
            GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
        Length = 411

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 249

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   250 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 308

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   309 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 368

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   369 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|P38919 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
            of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IDA] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
            "cytokine-mediated signaling pathway" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
            GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
            GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
            GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
            PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
            PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
            OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
            EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
            EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
            UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
            SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
            STRING:P38919 PhosphoSite:P38919 DMDM:20532400
            REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
            PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
            KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
            HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
            InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
            EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
            CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
            Uniprot:P38919
        Length = 411

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 249

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   250 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 308

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   309 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 368

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   369 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|A6M931 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
            "regulation of translation" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
            UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
            GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
        Length = 411

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 249

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   250 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 308

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   309 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 368

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   369 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|F1RZ83 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
            translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
            EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
            Uniprot:F1RZ83
        Length = 411

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 249

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   250 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 308

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   309 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 368

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   369 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|A4QVP2 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
            RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
            EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
            Uniprot:A4QVP2
        Length = 396

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 85/225 (37%), Positives = 130/225 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF E +  I + LP   Q +L SATMP  V +++ K++ +P+ I LV  +DE   E
Sbjct:   177 MLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRI-LV-KKDELTLE 234

Query:    61 GIKLYAISTTATS-KRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
             GIK + I+      K   LSDL  TV     + ++F  T+R  D ++  LT+      A+
Sbjct:   235 GIKQFYIAVEKEEWKLDTLSDLYETVTIT--QAVIFCNTRRKVDWLTDKLTARDFTVSAM 292

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD+ Q QR+  +  FR G   VL+ATD+ ARG+D+  V L+I+Y+LP + E ++HR GR
Sbjct:   293 HGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGR 352

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
              GR G++G AI   T+   R +R +E+    + E + P  V D++
Sbjct:   353 GGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEM-PMNVADLI 396


>RGD|1591139 [details] [associations]
            symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
            isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
            IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
            ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
            KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
        Length = 411

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 79/224 (35%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 249

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   250 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 308

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   309 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 368

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   369 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 346 (126.9 bits), Expect = 9.4e-31, P = 9.4e-31
 Identities = 84/213 (39%), Positives = 123/213 (57%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   353 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 412

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   413 SENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 468

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   469 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 528

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDV 206
             R GRTGR G  G   L  +    R + ++ +D+
Sbjct:   529 RIGRTGRVGNLGLIGLATSFFNERNI-NITKDL 560


>CGD|CAL0005460 [details] [associations]
            symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
            ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
            "RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
            EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
            ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
            GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
            Uniprot:Q5APT8
        Length = 564

 Score = 343 (125.8 bits), Expect = 9.9e-31, P = 9.9e-31
 Identities = 87/261 (33%), Positives = 145/261 (55%)

Query:     1 MLAVGFEEDVELILENLP-PKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 59
             ML  GFEED++ I+ N    +RQ+++F+AT P  V++L+  ++++P+ +  VG++DE  A
Sbjct:   308 MLEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVT-VGDRDELSA 366

Query:    60 EGIKLYAIST-TATSKRTILSDLITVY----AKGGKTIVFTQTKRDADEVSLALT-SIIA 113
                    +       K   L  L+  Y    +   K ++F   K++A  +   L  +  +
Sbjct:   367 NKRITQVVEVINKFDKEKKLIQLLRKYNANESSDNKILIFALYKKEASRIENFLKRNRFS 426

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               A+HGD+SQ QR   L+ F+ G+  +L+ATDVAARGLDIPNV ++I+   P   E +VH
Sbjct:   427 VAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVH 486

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF-EFVSPPVVEDVLE--SSAEQVV 230
             R GRTGRAG +GTA  +FT  ++    +L     C      + PV E++L+     ++  
Sbjct:   487 RIGRTGRAGAKGTAHTLFTEDEKHLSGAL-----CNILRGANQPVPEELLKFGGHTKKKA 541

Query:   231 ATLNGVHPESVEFFTPTAQRL 251
              ++ G   + V+  T TA+++
Sbjct:   542 HSVYGAFYKDVDM-TKTAKKI 561


>FB|FBgn0001942 [details] [associations]
            symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
            "Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0006413 "translational initiation"
            evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
            factor 4F complex" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
            evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
            ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
            unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
            cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
            [GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
            "instar larval development" evidence=TAS] [GO:0009950
            "dorsal/ventral axis specification" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
            [GO:0007052 "mitotic spindle organization" evidence=IMP]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
            damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
            cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
            maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
            [GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
            organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
            GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
            GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
            GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
            GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
            EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
            RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
            RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
            ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
            MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
            EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
            EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
            EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
            KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
            InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
            GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
            Uniprot:Q02748
        Length = 403

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 74/207 (35%), Positives = 128/207 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ ++ + + LPP  Q +L SATMP  V ++SR ++ +P++I LV  ++E   E
Sbjct:   184 MLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSI-LV-KKEELTLE 241

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEAL 117
             GIK + ++    + K   L DL    +   ++++F  T+R  D+++  +++ +   S A+
Sbjct:   242 GIKQFYVNVKQENWKLGTLCDLYDTLSIT-QSVIFCNTRRKVDQLTQEMSIHNFTVS-AM 299

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD+ Q  RE  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP++ E ++HR GR
Sbjct:   300 HGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGR 359

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLER 204
              GR G++G AI   T   RR ++ +E+
Sbjct:   360 GGRFGRKGVAINFITDDDRRILKDIEQ 386


>UNIPROTKB|E1BSE5 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
            EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
            ArrayExpress:E1BSE5 Uniprot:E1BSE5
        Length = 402

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 76/206 (36%), Positives = 119/206 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   188 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   246 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+
Sbjct:   305 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GR G++G AI    +   R +R +E+
Sbjct:   365 GRYGRKGVAINFVKNDDIRILRDIEQ 390


>CGD|CAL0000056 [details] [associations]
            symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
            transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
            ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
            KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
        Length = 539

 Score = 341 (125.1 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 86/235 (36%), Positives = 130/235 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L + F   ++ IL+ +P KR + LFSATM + ++KL R  L NP+ + +  +   + A+
Sbjct:   278 LLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAV--SSKYQTAD 335

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA--LH 118
              +    +      K TIL  L+  +  G   IVFT+T   A   +L L  I+   A  LH
Sbjct:   336 NLVQSMMLVNDGYKNTILIHLLNEFM-GKSIIVFTRTVAHAQRTAL-LARILGFNAVPLH 393

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G +SQ QR  +LN F+  +  +LVATDVAARGLDIP+VD++I+Y++P D + ++HR GRT
Sbjct:   394 GQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 453

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKF--EFVSPPVVEDVLESSAEQVVA 231
              RAG+ G +I + T         +E  +G K   E   P  V D L    ++  A
Sbjct:   454 ARAGRSGKSISLITQYDLEMYLRIESVLGKKLPKEDKPPKEVLDALHVHVDKATA 508


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 344 (126.2 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 86/232 (37%), Positives = 129/232 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  IL ++ P RQ+++ SAT P  V++L++ YL  P+ I  VG  D     
Sbjct:   403 MLDMGFEPQIMKILLDIRPDRQTVMTSATWPYAVRRLAQSYLKEPM-IVYVGTLDLVAVS 461

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHG 119
              +K   I TT   KR+ +   I   +   K I+F   K  AD +S  L    I+ E+LHG
Sbjct:   462 TVKQNIIVTTEDEKRSHIQTFIESMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHG 521

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             +  Q  RER L  F+ GK  +L+ATD+A+RGLD+ +V  + +Y+ P + E +VHR GRTG
Sbjct:   522 NREQGDRERALKNFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTG 581

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVA 231
             RAG+ G +I + T S  +    L   +    E  +  + ED++E  AE+  A
Sbjct:   582 RAGRTGVSITLITRSDWKIAGELIHIL----ERANQSIPEDLVEM-AERYKA 628


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 344 (126.2 bits), Expect = 1.5e-30, P = 1.5e-30
 Identities = 83/209 (39%), Positives = 116/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   350 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 409

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L DL+    K    +VF +TK+ AD +   L     A
Sbjct:   410 SENITQKV----VWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYA 465

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   466 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 525

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   526 RIGRTGRVGNLGLATSFFNERNINITKDL 554


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 344 (126.2 bits), Expect = 1.5e-30, P = 1.5e-30
 Identities = 83/209 (39%), Positives = 116/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   351 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 410

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L DL+    K    +VF +TK+ AD +   L     A
Sbjct:   411 SENITQKV----VWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYA 466

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   467 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH 526

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   527 RIGRTGRVGNLGLATSFFNERNINITKDL 555


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 344 (126.2 bits), Expect = 1.9e-30, P = 1.9e-30
 Identities = 81/209 (38%), Positives = 118/209 (56%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  RQ+M+FSAT P  ++ L+R +L+    L +  VG+ 
Sbjct:   400 MLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGST 459

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIA 113
              E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L     A
Sbjct:   460 SENITQKV----VWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYA 515

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR G+  ++VAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   516 CTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVH 575

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   +        + L
Sbjct:   576 RIGRTGRVGNLGLATSFYNDKNSNITKDL 604


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
 Identities = 82/198 (41%), Positives = 113/198 (57%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   352 MLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 411

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L DL+        T+VF +TK+ AD +   L     A
Sbjct:   412 SENITQKV----VWVEEADKRSFLLDLLNATGTDSLTLVFVETKKGADSLEDFLYHEGYA 467

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP D E +VH
Sbjct:   468 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPGDIEEYVH 527

Query:   174 RSGRTGRAGKEGTAILMF 191
             R GRTGR G  G A   F
Sbjct:   528 RIGRTGRVGNLGLATSFF 545


>ASPGD|ASPL0000037981 [details] [associations]
            symbol:AN2932 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
            PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
            Uniprot:Q5B948
        Length = 398

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 85/225 (37%), Positives = 130/225 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF E +  I + LP   Q +L SATMP  V +++ K++ +P+ I LV  Q+  L E
Sbjct:   179 MLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRI-LVKKQELTL-E 236

Query:    61 GIKLYAISTTATS-KRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
             GIK + I+      K   LSDL  TV     + ++F  T+R  D ++  LT+      A+
Sbjct:   237 GIKQFYIAVEKEEWKLDTLSDLYETVTIT--QAVIFCNTRRKVDWLTDKLTARDFTVSAM 294

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD+ Q QR+  +  FR G   VL+ATD+ ARG+D+  V L+I+Y+LP + E ++HR GR
Sbjct:   295 HGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGR 354

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
              GR G++G AI   T+   R +R +E+    + E + P  V D++
Sbjct:   355 GGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEM-PMNVADLI 398


>WB|WBGene00002083 [details] [associations]
            symbol:inf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
            GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
            EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
            UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
            DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
            PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
            EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
            UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
            InParanoid:P27639 NextBio:890522 Uniprot:P27639
        Length = 402

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 75/224 (33%), Positives = 128/224 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  +  ++P   Q +L SATMPS V  ++ +++ NP+ I LV  +DE   E
Sbjct:   183 MLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRI-LV-KKDELTLE 240

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALH 118
             GI+ + I+      K   L DL  V     + ++F  T+R  D ++  +T +      LH
Sbjct:   241 GIRQFYINVQKDEWKFDCLCDLYNV-VNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLH 299

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP++ E ++HR GR+
Sbjct:   300 GDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRS 359

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI   T +  R ++ +E     + E + P  + D++
Sbjct:   360 GRFGRKGVAINFVTENDARQLKEIESYYTTQIEEM-PESIADLI 402


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 343 (125.8 bits), Expect = 2.4e-30, P = 2.4e-30
 Identities = 85/211 (40%), Positives = 119/211 (56%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   394 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 453

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLI--TVYAKGGKTIVFTQTKRDADEVSLALTSI- 111
              E + + +    +    + KR+ L DL+  T   K   T+VF +TK+ AD +   L    
Sbjct:   454 SENITQKV----VWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSLEDFLYHEG 509

Query:   112 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 171
              A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +
Sbjct:   510 YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEY 569

Query:   172 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             VHR GRTGR G  G A   F        + L
Sbjct:   570 VHRIGRTGRVGNLGLATSFFNERNINITKDL 600


>FB|FBgn0015331 [details] [associations]
            symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
            "establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
            system development" evidence=NAS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
            EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
            ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
            MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
            EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
            UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
            OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
            NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
        Length = 619

 Score = 309 (113.8 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
 Identities = 71/202 (35%), Positives = 113/202 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKL 58
             M+ +GFEEDV  I      +RQ++LFSATMP  ++  +R  L  P  +N+   G     +
Sbjct:   345 MIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNV 404

Query:    59 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEAL 117
              + ++ Y       +K   L D +   A     ++F + K+D D +    L   + + A+
Sbjct:   405 TQQVE-YV---KQEAKVVYLLDCLQKTAP--PVLIFAEKKQDVDCIHEYLLLKGVEAVAI 458

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HG   Q +R R ++ +R GK  VLVATDVA++GLD PNV  +I+Y++P+D E +VHR GR
Sbjct:   459 HGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGR 518

Query:   178 TGRAGKEGTAILMFTSSQRRTV 199
             TGR+  +G A  +   +  ++V
Sbjct:   519 TGRSNTKGLATTLINKTTEQSV 540

 Score = 56 (24.8 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query:   478 CFNCGKSGHRASECP 492
             C  CG  GHR +ECP
Sbjct:   579 CTYCGGLGHRITECP 593


>UNIPROTKB|E1C2R8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0072358 "cardiovascular system
            development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
            Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
        Length = 496

 Score = 335 (123.0 bits), Expect = 2.9e-30, P = 2.9e-30
 Identities = 74/222 (33%), Positives = 129/222 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + + I+ VGN +     
Sbjct:   249 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQIN-VGNLELSANH 307

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   308 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 367

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   368 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 427

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   428 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 469


>TAIR|locus:2030285 [details] [associations]
            symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
            "plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
            membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
            to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
            stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
            GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
            ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
            EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
            RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
            SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
            EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
            GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
            PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
            Uniprot:Q9CAI7
        Length = 414

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 80/224 (35%), Positives = 128/224 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + LP K Q  +FSATMP    +++RK+++ P+ I LV  +DE   E
Sbjct:   195 MLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLE 252

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIAS-EALH 118
             GIK + ++      K   L DL    A   ++++F  T+R  D ++  + S   +  A H
Sbjct:   253 GIKQFYVNVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATH 311

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q+ R+  +  FR G   VL+ TD+ ARG+D+  V L+I+++LP  PE ++HR GR+
Sbjct:   312 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 371

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI   TS   R +  ++R      E + P  V D+L
Sbjct:   372 GRFGRKGVAINFMTSEDERMMADIQRFYNVVVEEL-PSNVADLL 414


>ASPGD|ASPL0000069536 [details] [associations]
            symbol:AN7424 species:162425 "Emericella nidulans"
            [GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
            from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
            GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
        Length = 488

 Score = 334 (122.6 bits), Expect = 3.1e-30, P = 3.1e-30
 Identities = 77/202 (38%), Positives = 117/202 (57%)

Query:     1 MLAVGFEEDVELILENLP-PKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQ--DEK 57
             ML  GFE+D++ I+  +P  KRQ+++F+AT P  V+ L+  ++ +P+ + + G+   D +
Sbjct:   231 MLDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPR 290

Query:    58 LAEGIKLYAISTTATSKRTILSDLITVYAKG--GKTIVFTQTKRDADEVSLAL-TSIIAS 114
                 IK          K   L  ++  + +G   K + F   K++A  V   L T     
Sbjct:   291 ANSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKGFKV 350

Query:   115 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 174
               +HGD+SQ +R R+L  F+ G  TVLVATDVAARGLDIP+V L+++   P   E +VHR
Sbjct:   351 AGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHR 410

Query:   175 SGRTGRAGKEGTAILMFTSSQR 196
              GRTGRAG +G AI +FT + +
Sbjct:   411 IGRTGRAGADGHAITLFTETDK 432


>UNIPROTKB|B4DXX7 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
            UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
            IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
            UCSC:uc011nar.1 Uniprot:B4DXX7
        Length = 657

 Score = 341 (125.1 bits), Expect = 3.1e-30, P = 3.1e-30
 Identities = 82/209 (39%), Positives = 116/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   347 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 406

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L D++        T+VF +TK+ AD +   L     A
Sbjct:   407 SENITQKV----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYA 462

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   463 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVH 522

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   523 RIGRTGRVGNLGLATSFFNEKNMNITKDL 551


>UNIPROTKB|O15523 [details] [associations]
            symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
            HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
            EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
            RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
            SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
            PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
            Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
            KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
            HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
            InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
            NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
            Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
        Length = 660

 Score = 341 (125.1 bits), Expect = 3.2e-30, P = 3.2e-30
 Identities = 82/209 (39%), Positives = 116/209 (55%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E   +PPK  R +M+FSAT P  ++ L+R +LD    L +  VG+ 
Sbjct:   350 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 409

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 113
              E + + +    +      KR+ L D++        T+VF +TK+ AD +   L     A
Sbjct:   410 SENITQKV----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYA 465

Query:   114 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 173
               ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D E +VH
Sbjct:   466 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVH 525

Query:   174 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             R GRTGR G  G A   F        + L
Sbjct:   526 RIGRTGRVGNLGLATSFFNEKNMNITKDL 554


>TAIR|locus:2032910 [details] [associations]
            symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
            development" evidence=IMP] [GO:0009791 "post-embryonic development"
            evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
            evidence=IMP] [GO:0006606 "protein import into nucleus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
            GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
            HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
            PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
            ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
            EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
            KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
            InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
            Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
        Length = 491

 Score = 334 (122.6 bits), Expect = 3.4e-30, P = 3.4e-30
 Identities = 80/226 (35%), Positives = 129/226 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L VGF++++  I + LP  RQ++LFSATM S ++ L  ++  N         +  K  +
Sbjct:   215 VLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALL-EHSSNKAYF-YEAYEGLKTVD 272

Query:    61 GIKLYAISTTATSKRTILSDLIT-VYAKGGKT-IVFTQTKRDADEVSLALTSI-IASEAL 117
              +    I     +K   L  +++ +  KG ++ ++F  T R    +SL L  + + + A+
Sbjct:   273 TLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAM 332

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             H   SQ  R   L+ F+ GK  +L+ATDVA+RGLDIP VDL+I+Y++P DP  +VHR GR
Sbjct:   333 HSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGR 392

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLE 223
             T RAG+ G A+ + T +  + +  +E +VG K E  +  V+ D LE
Sbjct:   393 TARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDSLE 438


>TIGR_CMR|CPS_1418 [details] [associations]
            symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
            GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
            BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
        Length = 401

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 79/225 (35%), Positives = 129/225 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF +D+  I+E LP  RQ++LFSATM   V+ L+++ +  P+ I +  ++  K   
Sbjct:   164 MLDMGFIDDINKIIERLPEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASK--P 221

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ + ++    +K  +LS +IT      + ++F +TK  A ++   L    I +E++H 
Sbjct:   222 KIEQWLVTVDKANKSALLSHIITTQ-NWQQALIFIETKHGAAKLVSQLEKRGIVAESIHS 280

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
               +Q  RE+ LN F+ GK   LVAT +AARGLDI  +  +I+Y+LP   + ++HR GRTG
Sbjct:   281 GRAQDIREKILNDFKSGKIKFLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTG 340

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGC---KFEFVSPPVVEDV 221
             RAG  G AI + +    R + ++E  +G    + EF   PV + V
Sbjct:   341 RAGASGEAISLVSKDNFRELCAIESRLGHIIERKEFEEFPVKKTV 385


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 340 (124.7 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 82/216 (37%), Positives = 125/216 (57%)

Query:     1 MLAVGFEEDVELILE--NLPPK--RQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I++  ++PP   RQ+MLFSAT P  +++L+  +L N   L +  VG+ 
Sbjct:   310 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSS 369

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGK------TIVFTQTKRDADEVS--L 106
              + + + ++    S     KR+ L DL+    + G       T+VF +TK+ AD +   L
Sbjct:   370 TDLIVQRVEFVHDS----DKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWL 425

Query:   107 ALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN 166
              +    A+  +HGD SQ +RE  L  F+ G+  +LVATDVAARGLDIP+V  +++++LPN
Sbjct:   426 CINGFPAT-TIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPN 484

Query:   167 DPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             D + +VHR GRTGRAG  G A   F  +     + L
Sbjct:   485 DIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPL 520


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 344 (126.2 bits), Expect = 3.9e-30, P = 3.9e-30
 Identities = 81/215 (37%), Positives = 121/215 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M   GFE  +  ++ N+ P +Q++LFSAT P  ++ L+RK LD P+ I LVG +    ++
Sbjct:   466 MFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEI-LVGGKSVVCSD 524

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV--SLALTSIIASEALH 118
              I   A+      K   L +L+ +Y + G +IVF   +  AD++   L  T   +   LH
Sbjct:   525 -ITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLH 583

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G I QH R+ ++  F+ G   VLVAT VAARGLD+ N+ L+++Y+ PN  E +VHR GRT
Sbjct:   584 GGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRT 643

Query:   179 GRAGKEGTAI-LMFTSSQRRTVRSLER---DVGCK 209
             GRAG++G A   +    Q +    + R     GCK
Sbjct:   644 GRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCK 678


>FB|FBgn0030631 [details] [associations]
            symbol:CG6227 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
            RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
            EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
            UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
            Uniprot:Q9VXW2
        Length = 1224

 Score = 345 (126.5 bits), Expect = 4.6e-30, P = 4.6e-30
 Identities = 74/198 (37%), Positives = 118/198 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + +VG +     E
Sbjct:   672 MFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEV-IVGGRSVVCKE 730

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              ++ + +     +K   L +L+ +Y + G  IVF   + +AD +   L        +LHG
Sbjct:   731 -VEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHG 789

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q  R+ T+  F+ GK  +L+AT VAARGLD+ ++ L+++Y++PN  E +VHR GRTG
Sbjct:   790 GIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTG 849

Query:   180 RAGKEGTAILMFTSSQRR 197
             RAGK+G+A    T  Q R
Sbjct:   850 RAGKKGSAYTFITPEQSR 867


>FB|FBgn0035720 [details] [associations]
            symbol:CG10077 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
            EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
            GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
            ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
            RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
            STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
            UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
        Length = 818

 Score = 340 (124.7 bits), Expect = 7.4e-30, P = 7.4e-30
 Identities = 75/206 (36%), Positives = 127/206 (61%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ +++SAT P  V++L+ ++L+N + ++ +G+       
Sbjct:   316 MLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVN-IGSLSLSANH 374

Query:    61 GIKLYAISTTATSKRTI-LSDLIT-VYAKGG-KTIVFTQTKRDADEVSLALTSI-IASEA 116
              I L  +     +++ + L  L+T + A+   KTI+F +TK+  DE++  ++     + A
Sbjct:   375 NI-LQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACA 433

Query:   117 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSG 176
             +HGD SQ +R+  L+ FR G+ ++LVATDVAARGLD+ +V  +I+Y+ P++ E +VHR G
Sbjct:   434 IHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIG 493

Query:   177 RTGRAGKEGTAILMFTSSQRRTVRSL 202
             RTGR+   GTA  +FT S       L
Sbjct:   494 RTGRSNNTGTAYTLFTHSNANKANDL 519


>TAIR|locus:2020078 [details] [associations]
            symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
            salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
            GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
            EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
            EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
            UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
            PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
            GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
            InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
            ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
            Uniprot:P41377
        Length = 412

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 79/224 (35%), Positives = 128/224 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + LPPK Q  +FSATMP    +++RK++  P+ I LV  +DE   E
Sbjct:   193 MLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI-LV-KRDELTLE 250

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIAS-EALH 118
             GIK + ++      K   L DL    A   ++++F  T+R  D ++  + S   +  A H
Sbjct:   251 GIKQFYVNVEKEDWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATH 309

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q+ R+  +  FR G   VL+ TD+ ARG+D+  V L+I+++LP  PE ++HR GR+
Sbjct:   310 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI   T   +R +  +++      E + P  V D+L
Sbjct:   370 GRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEEL-PSNVADLL 412


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 336 (123.3 bits), Expect = 8.3e-30, P = 8.3e-30
 Identities = 79/229 (34%), Positives = 127/229 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  IL ++ P RQ+++ +A+ P   ++L++ YL  P+ I  VG  D     
Sbjct:   360 MLDLGFEHQIMKILLDVRPDRQTVMTTASWPDSTRRLAQSYLKQPM-IVYVGTLDLVTVN 418

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              +K   I TT   KR+++ + +   +   K IVF   K  AD++S  L+   I  ++LHG
Sbjct:   419 TVKQNIIVTTEEEKRSLVKEFLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHG 478

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D  Q  R++ L  FR G+  +L+ATD+AARGLD+ +V  + +Y  P + E +VHR GRTG
Sbjct:   479 DREQSDRDQALEDFRTGRVKILIATDLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTG 538

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 228
             RAGK G +I + T    +    L + +    + V PP +  + +   +Q
Sbjct:   539 RAGKIGESITLVTQDDWKIADELIKILQRANQIV-PPSLRSMADRFKKQ 586


>TAIR|locus:2176192 [details] [associations]
            symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
            evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
            OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
            RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
            SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
            EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
            GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
            ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
            Uniprot:Q9LU46
        Length = 591

 Score = 307 (113.1 bits), Expect = 9.9e-30, Sum P(2) = 9.9e-30
 Identities = 72/238 (30%), Positives = 128/238 (53%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ++ +GFE+D+  + ++   +RQ++LFSATMP+ ++  +R  L  P+ ++ VG      A 
Sbjct:   314 LVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVN-VGRAG---AA 369

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHG 119
              + +         +  I+  L  +       ++F + K D D++    L   + + A+HG
Sbjct:   370 NLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHG 429

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
                Q  RE  ++ F+ GK  VLVATDVA++GLD P++  +I+Y++P + E +VHR GRTG
Sbjct:   430 GKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTG 489

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAE-QVVATLNGV 236
             R GK G A      +Q  T     + +  + +   PPV+ ++ +   E + +A  +GV
Sbjct:   490 RCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETIANASGV 547

 Score = 51 (23.0 bits), Expect = 9.9e-30, Sum P(2) = 9.9e-30
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query:   478 CFNCGKSGHRASECP 492
             C  CG  GHR  +CP
Sbjct:   550 CAYCGGLGHRIRDCP 564


>TIGR_CMR|GSU_0189 [details] [associations]
            symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
            ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
            PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
            Uniprot:Q74GQ7
        Length = 460

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 74/203 (36%), Positives = 113/203 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF++D+  ++   PPKRQ++LFSAT P  +  +S      P+ + +    DE   E
Sbjct:   159 MLDMGFQDDISALIAAAPPKRQTLLFSATYPDSIAAMSAGVQREPVEVSV----DEVHGE 214

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
             G          + +R    + I  + +    ++F  TK +  EV+ AL     A+ A+HG
Sbjct:   215 GAIEQVFYEVDSGQRIEAVERILGHYRPESALIFCNTKLECQEVANALAVRGYAALAIHG 274

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q +R+R L  F     +VLVATDVAARGLDI  +  +I+YEL  +PE   HR GRTG
Sbjct:   275 DLDQRERDRVLVRFANRSASVLVATDVAARGLDIKELSAVINYELTRNPEVHTHRIGRTG 334

Query:   180 RAGKEGTAILMFTSSQRRTVRSL 202
             RAG+ G A+ + T  + R + ++
Sbjct:   335 RAGERGLAVSLVTPRESRLIAAI 357


>SGD|S000001767 [details] [associations]
            symbol:TIF1 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
            "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
            SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
            EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 74/213 (34%), Positives = 123/213 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF+E +  I   LPP  Q +L SATMP+ V +++ K++ NP+ I LV  +DE   E
Sbjct:   175 MLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRI-LV-KKDELTLE 232

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L+DL    +   + ++F  T+R  +E++  L +      A++
Sbjct:   233 GIKQFYVNVEEEEYKYECLTDLYDSISVT-QAVIFCNTRRKVEELTTKLRNDKFTVSAIY 291

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
              D+ Q +R+  +  FR G   +L++TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   292 SDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRG 351

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 211
             GR G++G AI   T+     +R LE+    + E
Sbjct:   352 GRFGRKGVAINFVTNEDVGAMRELEKFYSTQIE 384


>SGD|S000003674 [details] [associations]
            symbol:TIF2 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
            initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0006413 "translational initiation"
            evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
            GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 74/213 (34%), Positives = 123/213 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF+E +  I   LPP  Q +L SATMP+ V +++ K++ NP+ I LV  +DE   E
Sbjct:   175 MLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRI-LV-KKDELTLE 232

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L+DL    +   + ++F  T+R  +E++  L +      A++
Sbjct:   233 GIKQFYVNVEEEEYKYECLTDLYDSISVT-QAVIFCNTRRKVEELTTKLRNDKFTVSAIY 291

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
              D+ Q +R+  +  FR G   +L++TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   292 SDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRG 351

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 211
             GR G++G AI   T+     +R LE+    + E
Sbjct:   352 GRFGRKGVAINFVTNEDVGAMRELEKFYSTQIE 384


>ZFIN|ZDB-GENE-040426-915 [details] [associations]
            symbol:eif4a3 "eukaryotic translation initiation
            factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
            translation" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
            GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
            UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
            PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
            NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
        Length = 406

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 78/224 (34%), Positives = 125/224 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q  L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   187 MLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   245 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G   VL++TDV ARGLD+  V LII+Y+LPN+ E ++HR GR+
Sbjct:   304 GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRS 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   364 GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 406


>WB|WBGene00006888 [details] [associations]
            symbol:vbh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0032502 "developmental process"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
            germ-line" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
            GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
            ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
            MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
            EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
            GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
            WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
            ArrayExpress:Q65XX1 Uniprot:Q65XX1
        Length = 660

 Score = 336 (123.3 bits), Expect = 1.1e-29, P = 1.1e-29
 Identities = 82/208 (39%), Positives = 120/208 (57%)

Query:     1 MLAVGFEEDVELIL-ENLPPK--RQSMLFSATMPSWVKKLSRKYL-DNPLNIDLVGNQDE 56
             ML +GFE  +  I+ + +PPK  R + +FSAT P  ++ L++ +L DN + +  VG    
Sbjct:   309 MLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFL-AVGRVGS 367

Query:    57 KLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASE 115
               +E I+   +      KR+ L +++         +VF +TKR A+E++  L    I S 
Sbjct:   368 T-SENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSV 426

Query:   116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 175
             ++HGD+ Q +RER L  FR G+  +LVAT VAARGLDIPNV  +I+Y+LP D + +VHR 
Sbjct:   427 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRI 486

Query:   176 GRTGRAGKEGTAILMFTSSQRRTVRSLE 203
             GRTGR G  G A   F    R   R L+
Sbjct:   487 GRTGRCGNLGIATSFFNDKNRGIGRDLK 514


>FB|FBgn0037573 [details] [associations]
            symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
            melanogaster" [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=ISS] [GO:0003743 "translation initiation
            factor activity" evidence=ISS] [GO:0006413 "translational
            initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
            oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
            DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
            GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
            EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
            STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
            InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
        Length = 399

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 76/224 (33%), Positives = 126/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  +   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   180 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRI-LV-KRDELTLE 237

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D ++  +        ++H
Sbjct:   238 GIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMH 296

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G+  VL+ TDV ARG+D+  V L+I+Y+LPN+ E ++HR GR+
Sbjct:   297 GDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS 356

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    S   R +R +E+    + + + P  V D++
Sbjct:   357 GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEM-PVNVADLI 399


>POMBASE|SPAC1006.07 [details] [associations]
            symbol:SPAC1006.07 "translation initiation factor eIF4A
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
            "cytoplasmic translational initiation" evidence=NAS] [GO:0003743
            "translation initiation factor activity" evidence=ISO] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
            "ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
            EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
            ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
            EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
            OMA:PILEMED NextBio:20803983 Uniprot:P47943
        Length = 392

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 78/225 (34%), Positives = 129/225 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + LPP  Q +L SATMP  V +++ K++ +P+ I LV  +DE   E
Sbjct:   173 MLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRI-LV-KKDELTLE 230

Query:    61 GIKLYAISTTATS-KRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
             GIK + ++      K   L DL  TV     + ++F  T+R  D ++  LT       ++
Sbjct:   231 GIKQFYVAVEKEEWKLDTLCDLYETVTVT--QAVIFCNTRRKVDWLTEQLTERDFTVSSM 288

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD+ Q QR+  ++ FR G   +L+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR
Sbjct:   289 HGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGR 348

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
              GR G++G +I   T+   R +R +E+      E + P  + D++
Sbjct:   349 GGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEM-PMNIADLI 392


>TAIR|locus:2091191 [details] [associations]
            symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
            hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0035145 "exon-exon junction complex" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
            GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
            EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
            OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
            IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
            ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
            PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
            KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
            PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
            GermOnline:AT3G19760 Uniprot:Q94A52
        Length = 408

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 77/224 (34%), Positives = 126/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  +   LPP  Q  L SAT+P  + +++ K++  P+ I LV  +DE   E
Sbjct:   189 MLSRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKI-LV-KRDELTLE 246

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  TKR  D +S  + S      ++H
Sbjct:   247 GIKQFFVAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDYLSEKMRSHNFTVSSMH 305

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +N FR G   VL+ TDV ARG+D+  V L+I+Y+LPN+ E ++HR GR+
Sbjct:   306 GDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS 365

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI    S   + +R +E+    + + + P  V D++
Sbjct:   366 GRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEM-PMNVADLI 408


>WB|WBGene00012059 [details] [associations]
            symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
            GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
            OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
            ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
            EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
            UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
            NextBio:892086 Uniprot:P34580
        Length = 489

 Score = 329 (120.9 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 76/212 (35%), Positives = 122/212 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L + FE +++ IL+ +P +R++ LFSATM   V KL R  L +P  + +      K  +
Sbjct:   199 ILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSRY--KTVD 256

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              +K + I      K T L  L+  +A G   IVF  T     ++++ L  + + +  LHG
Sbjct:   257 NLKQHYIFVPNKYKETYLVYLLNEHA-GNSAIVFCATCATTMQIAVMLRQLGMQAVPLHG 315

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              +SQ +R  +LN F+     +LV TDVAARGLDIP+VD++I+Y++P+  + +VHR GRT 
Sbjct:   316 QMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTA 375

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 211
             RAG+ G AI + T       + +E ++G K +
Sbjct:   376 RAGRSGIAITVVTQYDVEAYQKIEANLGKKLD 407


>UNIPROTKB|F1NVJ6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
            EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
            Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
        Length = 642

 Score = 335 (123.0 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 79/229 (34%), Positives = 127/229 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  IL ++ P RQ+++ SAT P  V++L++ YL NP+ I  VG  D     
Sbjct:   398 MLDMGFEPQIMKILIDVRPDRQTVMMSATWPDGVRRLAKSYLRNPM-IVYVGTLDLAAVN 456

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHG 119
              ++   I      K+  + + I       K I+F   K  AD+++  L    +  ++LHG
Sbjct:   457 TVEQKVIVINEEEKKAFMENFIDSMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHG 516

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D  Q  RE+ L+ F++GK  +LVATD+A+RGLD+ ++  + +++ P + E +VHR GRTG
Sbjct:   517 DREQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTG 576

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 228
             RAG+ G A+ + T    +    L  D+  +    +  VV D L S AE+
Sbjct:   577 RAGRTGKAVTLITKKDWKAASELI-DILQR----AKQVVPDELISMAER 620


>DICTYBASE|DDB_G0280147 [details] [associations]
            symbol:ddx47 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
            GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
            EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
            EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
            Uniprot:Q54VT4
        Length = 546

 Score = 332 (121.9 bits), Expect = 1.4e-29, P = 1.4e-29
 Identities = 76/193 (39%), Positives = 121/193 (62%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             + +  FEE+V  IL+ +P +R + LFSATM S V KL R  L NP+ +  V ++ + +  
Sbjct:   274 LFSADFEEEVNNILKVIPKERNTYLFSATMTSKVAKLQRASLVNPVKVQ-VASKYQTVDT 332

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              ++ Y +      K   L+ ++   A G  TI+FT T   + ++++ L ++   +  ++G
Sbjct:   333 LLQQY-LFVPFKYKDCYLAYILNELA-GNLTIIFTSTCASSTKIAMMLRNLGFGAIPING 390

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q +R  +LN F+QG  ++LVATDVAARGLDIP+VDL+I+Y++P + + +VHR GRT 
Sbjct:   391 DMDQGKRLASLNKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTA 450

Query:   180 RAGKEGTAILMFT 192
             RAG  G AI + T
Sbjct:   451 RAGNSGRAITIVT 463


>POMBASE|SPBC17D1.06 [details] [associations]
            symbol:dbp3 "ATP-dependent RNA helicase Dbp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
            "ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
            GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
            PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
            STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
            GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
            Uniprot:Q10202
        Length = 578

 Score = 333 (122.3 bits), Expect = 1.4e-29, P = 1.4e-29
 Identities = 82/206 (39%), Positives = 118/206 (57%)

Query:     1 MLAVGFEEDVELILENLP-P----KRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQD 55
             ML  GFE+D+  I+ + P P     RQ++ FSAT P  V+ L+  +L +P+ I  +G+ +
Sbjct:   321 MLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKIT-IGSDE 379

Query:    56 EKLAEGI-KLYAISTTATSKRTILSDLITVY-AKGGKT---IVFTQTKRDADEVSLALTS 110
                ++ I ++  I     SK  +L +L+  + + GGK    ++F   K++A  V   L  
Sbjct:   380 LAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLAR 439

Query:   111 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 170
                   +HGD+SQ  R + LN F+ GK  VLVATDVAARGLDIP V L+I+   P   E 
Sbjct:   440 KYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIED 499

Query:   171 FVHRSGRTGRAGKEGTAILMFTSSQR 196
             +VHR GRTGRA  +GTAI  FT   +
Sbjct:   500 YVHRIGRTGRANTKGTAITFFTPQDK 525


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
 Identities = 89/235 (37%), Positives = 130/235 (55%)

Query:     1 MLAVGFEEDVELILE--NLPP--KRQSMLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQ 54
             ML +GFE  +  I+E  N+PP  +RQ+++FSAT P  +++L+  +L N   L +  VG+ 
Sbjct:   464 MLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGST 523

Query:    55 DEKLAEGIKLYAISTTATSKRTILSDLITV------YAKGGKTIVFTQTKRDADEVSLAL 108
              E + + I L+        KR+ L DL++       Y K   T++F +TK+ AD +   L
Sbjct:   524 SENITQTI-LWVYEP---DKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFL 579

Query:   109 TSIIAS-EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPND 167
                     ++HGD +Q +RE  L  FR G   +LVAT VAARGLDIP+V  +I+++LP+D
Sbjct:   580 YQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSD 639

Query:   168 PETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL-ERDVGCKFEFVSPPVVEDV 221
              E +VHR GRTGR G  G A   F    R     L E  +  K E   P  +ED+
Sbjct:   640 VEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEI--PSFMEDM 692


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 334 (122.6 bits), Expect = 1.7e-29, P = 1.7e-29
 Identities = 85/232 (36%), Positives = 128/232 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  IL ++ P RQ+++ SAT P  V++L++ YL  P+ I  VG  D     
Sbjct:   400 MLDMGFEPQIMKILLDVRPDRQTVMTSATWPYAVRRLAQSYLKEPM-IVYVGTLDLVAVS 458

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHG 119
              +    I TT   KR+ +   I   +   K I+F   K  AD +S  L    I+ E+LHG
Sbjct:   459 TVTQNIIVTTEDEKRSHIQAFIDSMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHG 518

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             +  Q  RER L  F+ GK  +L+ATD+A+RGLD+ +V  + +Y+ P + E +VHR GRTG
Sbjct:   519 NREQSDRERALKSFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTG 578

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVA 231
             RAG+ G +I + T +  +    L   +    E  +  V ED++ S AE+  A
Sbjct:   579 RAGRTGVSITLITRNDWKIAGELINIL----ERANQSVPEDLV-SMAERYKA 625


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 334 (122.6 bits), Expect = 1.7e-29, P = 1.7e-29
 Identities = 77/203 (37%), Positives = 113/203 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  IL ++ P RQ+++ SAT P  V +L++ YL  P+ I  VG  D     
Sbjct:   401 MLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPM-IVYVGTLDLVAVS 459

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              +K   I TT   K + +   +   +   K IVF   K  AD +S  L    I+ E+LHG
Sbjct:   460 SVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHG 519

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D  Q  RE+ L  F+ GK  +L+ATD+A+RGLD+ +V  + +++ P + E +VHR GRTG
Sbjct:   520 DREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTG 579

Query:   180 RAGKEGTAILMFTSSQRRTVRSL 202
             RAG+ G +I   T +  R    L
Sbjct:   580 RAGRTGVSITTLTRNDWRVASEL 602


>TIGR_CMR|SPO_3833 [details] [associations]
            symbol:SPO_3833 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K05592 InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_169021.1
            ProteinModelPortal:Q5LLT8 GeneID:3196362 KEGG:sil:SPO3833
            PATRIC:23381169 HOGENOM:HOG000268794 OMA:MQHRSGR Uniprot:Q5LLT8
        Length = 709

 Score = 335 (123.0 bits), Expect = 1.8e-29, P = 1.8e-29
 Identities = 85/268 (31%), Positives = 136/268 (50%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+E +L   P  R+++LFSAT+   + +L++ Y      I  +G   E+   
Sbjct:   181 MLDLGFREDLEFMLGEAPEDRRTLLFSATVSPAIAELAKTYQRQAARISTLGG--ERQHS 238

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I   A+  +       + +L+  +      IVF  T+     ++  L +   A  +L G
Sbjct:   239 DISYQAVQVSGGDGEHAIINLLRFH-DAPTAIVFANTRAAVARLTARLANRGFAVVSLSG 297

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             ++SQ +R   L   R G+  V VATDVAARG+D+PN+DL+IH +LP + E  +HRSGRTG
Sbjct:   298 ELSQDERSHALQAMRDGRARVCVATDVAARGIDLPNLDLVIHADLPTNTEGLLHRSGRTG 357

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 239
             RAG++G + L+      +    L +    + E+   P  ED+L     +++A      P 
Sbjct:   358 RAGRKGISALIVPDKISKKASRLLKWAKIEAEWTQAPTPEDILAKDEARLLADPLWTDPV 417

Query:   240 SVEFFTPTAQRLIEEKGTDALAAALAQL 267
               E  T  A  L+E+     +A A  +L
Sbjct:   418 EDEE-TRIAAGLMEQFTAQQIAVACLRL 444


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 335 (123.0 bits), Expect = 1.9e-29, P = 1.9e-29
 Identities = 85/233 (36%), Positives = 134/233 (57%)

Query:     1 MLAVGFEEDVELILEN--LPPK--RQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDE 56
             ML +GF ED+E +L++  +P K  RQ+++FSAT PS ++ L+R+ L  P  + +V  Q  
Sbjct:   449 MLDMGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREIL-KPDYLFVVVGQVG 507

Query:    57 KLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASE 115
                  ++   I      K+  L +++       +T+VF +TK+ AD ++  L    + S 
Sbjct:   508 GACSDVEQMVIEVDEFGKKDKLMEILQEIGSE-RTMVFVKTKKKADFIATFLCQEKVPST 566

Query:   116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 175
             ++HGD  Q +RE  L  FR G+  V+VAT VAARGLDI NV  +I++++P+D + +VHR 
Sbjct:   567 SIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDIENVSYVINFDIPDDIDEYVHRI 626

Query:   176 GRTGRAGKEGTAILMFTS---SQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 225
             GRTGR G  G AI  F      ++R  RSL + +    + V P  +E+V  S+
Sbjct:   627 GRTGRCGNTGRAISFFDKRGDDEQRIARSLVKVLSDAHQEV-PAWLEEVAFSA 678


>UNIPROTKB|Q8EGU0 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 84/221 (38%), Positives = 119/221 (53%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+E +   + P  Q+MLFSAT    VK+LS K L+ P  +++  N      E
Sbjct:   158 MLDLGFVRDIEKVKRLIAPVHQTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVE 217

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              + +Y +      K  +LS+L+       + +VF  TK  A+ +   LT   I++   HG
Sbjct:   218 QL-VYRVDKRR--KAELLSELVG-RNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHG 273

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D +Q  R R L+ F+ GK  VLVATDVAARGLDI  + L+I+ ELP   E +VHR GRTG
Sbjct:   274 DKTQGARNRVLDDFKAGKLRVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTG 333

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVED 220
             RAG  G AI   + +    +  +E  +G K      P  E+
Sbjct:   334 RAGLSGRAISFVSPADDEMLAEIEALIGEKLPVTVQPGYEE 374


>TIGR_CMR|SO_1501 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 84/221 (38%), Positives = 119/221 (53%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+E +   + P  Q+MLFSAT    VK+LS K L+ P  +++  N      E
Sbjct:   158 MLDLGFVRDIEKVKRLIAPVHQTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVE 217

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              + +Y +      K  +LS+L+       + +VF  TK  A+ +   LT   I++   HG
Sbjct:   218 QL-VYRVDKRR--KAELLSELVG-RNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHG 273

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D +Q  R R L+ F+ GK  VLVATDVAARGLDI  + L+I+ ELP   E +VHR GRTG
Sbjct:   274 DKTQGARNRVLDDFKAGKLRVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTG 333

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVED 220
             RAG  G AI   + +    +  +E  +G K      P  E+
Sbjct:   334 RAGLSGRAISFVSPADDEMLAEIEALIGEKLPVTVQPGYEE 374


>POMBASE|SPAC823.08c [details] [associations]
            symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
            SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
            KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
        Length = 465

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 77/212 (36%), Positives = 122/212 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L + F   ++ IL+ +P +R+++LFSATM S V+KL R  L  P+ +  V ++   +  
Sbjct:   201 LLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRV-AVSSKFSTVDT 259

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I+ Y +      K T L  L+   A G   I+F +T  D   +++ L ++  ++  LHG
Sbjct:   260 LIQRY-LFFPFKHKDTYLVYLVNELA-GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHG 317

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              +SQ  R   LN F+ G  + LVATDVAARGLDIP VD++I+Y++P D + ++HR GRT 
Sbjct:   318 QLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTA 377

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 211
             RAG+ G +I + T         +E  +G K +
Sbjct:   378 RAGRAGKSIALVTQYDLEPFLRIEATIGKKMQ 409


>UNIPROTKB|Q3SZ54 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
            IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
            ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
            Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
            InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
            NextBio:20866906 Uniprot:Q3SZ54
        Length = 406

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   245 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|F1P895 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
            EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
            Uniprot:F1P895
        Length = 406

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   245 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|J9NU36 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
            EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
        Length = 423

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   204 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 261

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   262 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 320

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   321 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 380

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   381 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 423


>UNIPROTKB|J9NY67 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
            ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
            GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
        Length = 406

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   245 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|P60842 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
            evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
            [GO:0008135 "translation factor activity, nucleic acid binding"
            evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
            process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
            Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
            GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
            GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
            EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
            EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
            RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
            PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
            ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
            MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
            PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
            Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
            GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
            neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
            EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
            ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
            Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
            Uniprot:P60842
        Length = 406

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   245 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|A6M928 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
            UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
            Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
            Uniprot:A6M928
        Length = 406

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   245 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>MGI|MGI:95303 [details] [associations]
            symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
            EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
            EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
            PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
            UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
            MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
            REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
            Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
            InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
            Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
        Length = 406

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   245 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|Q6P3V8 [details] [associations]
            symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
            norvegicus" [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
            GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
            UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
            Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
            InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
            Uniprot:Q6P3V8
        Length = 406

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/224 (34%), Positives = 127/224 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   245 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>WB|WBGene00018007 [details] [associations]
            symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
            "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0018996 "molting
            cycle, collagen and cuticulin-based cuticle" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
            GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
            EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
            ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
            MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
            EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
            KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
            WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
        Length = 399

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 76/224 (33%), Positives = 125/224 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  I   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   180 MLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI-LV-KRDELTLE 237

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  T+R  D ++  +        ++H
Sbjct:   238 GIKQFFVAVDREEWKFDTLIDLYDTLTIT-QAVLFCNTRRKVDWLTDKMKEANFTVSSMH 296

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q  R+  +  FR G   VL++TDV ARGLD+P V L+I+Y+LPN+ E ++HR GR+
Sbjct:   297 GDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRS 356

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI        R +R +E+    + + + P  + D++
Sbjct:   357 GRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEM-PMNIADII 399


>WB|WBGene00022029 [details] [associations]
            symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0018996 "molting cycle, collagen and
            cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
            cell development" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
            GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
            GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
            RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
            STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
            KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
            InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
        Length = 399

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 76/224 (33%), Positives = 125/224 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML  GF+E +  I   LPP  Q +L SAT+P  + +++ K++ +P+ I LV  +DE   E
Sbjct:   180 MLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI-LV-KRDELTLE 237

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + ++      K   L DL        + ++F  T+R  D ++  +        ++H
Sbjct:   238 GIKQFFVAVDREEWKFDTLIDLYDTLTIT-QAVLFCNTRRKVDWLTDKMKEANFTVSSMH 296

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q  R+  +  FR G   VL++TDV ARGLD+P V L+I+Y+LPN+ E ++HR GR+
Sbjct:   297 GDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRS 356

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI        R +R +E+    + + + P  + D++
Sbjct:   357 GRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEM-PMNIADII 399


>TAIR|locus:2088237 [details] [associations]
            symbol:EIF4A1 "eukaryotic translation initiation factor
            4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=ISS] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
            "response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
            "gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
            evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
            GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
            GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
            IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
            UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
            EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
            Uniprot:F4JEL4
        Length = 415

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 74/199 (37%), Positives = 116/199 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + LPPK Q  +FSATMP    +++RK++  P+ I LV  +DE   E
Sbjct:   193 MLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI-LV-KRDELTLE 250

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIAS-EALH 118
             GIK + ++      K   L DL    A   ++++F  T+R  D ++  + S   +  A H
Sbjct:   251 GIKQFYVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATH 309

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q+ R+  +  FR G   VL+ TD+ ARG+D+  V L+I+++LP  PE ++HR GR+
Sbjct:   310 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369

Query:   179 GRAGKEGTAILMFTSSQRR 197
             GR G++G AI   T    R
Sbjct:   370 GRFGRKGVAINFVTRDDER 388


>UNIPROTKB|A7E307 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
            GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
            IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
            Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
            InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
        Length = 650

 Score = 331 (121.6 bits), Expect = 3.7e-29, P = 3.7e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   251 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 309

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   310 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 369

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   370 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 429

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   430 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 471


>UNIPROTKB|E2RJ60 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
            Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
        Length = 650

 Score = 331 (121.6 bits), Expect = 3.7e-29, P = 3.7e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   251 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 309

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   310 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 369

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   370 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 429

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   430 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 471


>MGI|MGI:1914290 [details] [associations]
            symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0072358 "cardiovascular system
            development" evidence=IMP] [GO:2001014 "regulation of skeletal
            muscle cell differentiation" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
            GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
            GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
            ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
            EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
            RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
            UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
            IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
            REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
            GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
            InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
            CleanEx:MM_DDX17 Genevestigator:Q501J6
            GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
        Length = 650

 Score = 331 (121.6 bits), Expect = 3.7e-29, P = 3.7e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   251 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 309

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   310 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 369

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   370 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 429

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   430 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 471


>UNIPROTKB|E9PT29 [details] [associations]
            symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
            PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
        Length = 651

 Score = 331 (121.6 bits), Expect = 3.8e-29, P = 3.8e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   250 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 308

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   309 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 368

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   369 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 428

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   429 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 470


>TIGR_CMR|DET_0183 [details] [associations]
            symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:243164 "Dehalococcoides ethenogenes 195"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
            STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
            OMA:NFAPAVM ProtClustDB:CLSK837629
            BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
        Length = 560

 Score = 328 (120.5 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 71/206 (34%), Positives = 122/206 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GF+ D++ IL+ L    Q++LFSATMP  V+KL+ +   NP+ I  +G Q    + 
Sbjct:   156 MFDMGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTIQ-IGTQAPASSV 214

Query:    61 GIKLYAISTTATSKRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
                +Y +      K  +L +++ T   K    ++F +TK  A+ ++  ++     + +L 
Sbjct:   215 SHSVYPVKNH--QKTPLLIEILKTTETKS--VLIFARTKYGAENLADEISRAGFTTASLQ 270

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G++SQ++R   + GFR+G F +LVATD+AARGLDI ++  +I+Y++P+ PE + HR GRT
Sbjct:   271 GNLSQNRRHAVMEGFRRGNFKILVATDIAARGLDIDHISHVINYDMPDTPEDYTHRIGRT 330

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GR  + G A+ + T      VR +++
Sbjct:   331 GRFDRTGQALSLVTGRDGDMVRDIQK 356


>UNIPROTKB|Q92841 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0033148 "positive
            regulation of intracellular estrogen receptor signaling pathway"
            evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
            EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
            EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
            IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
            RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
            ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
            MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
            REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
            DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
            UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
            HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
            HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
            GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
            CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
            GO:GO:2001014 Uniprot:Q92841
        Length = 729

 Score = 331 (121.6 bits), Expect = 5.2e-29, P = 5.2e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   330 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 388

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   389 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 448

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   449 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 508

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   509 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 550


>UNIPROTKB|H3BLZ8 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0072358
            "cardiovascular system development" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
            ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
            Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
        Length = 731

 Score = 331 (121.6 bits), Expect = 5.2e-29, P = 5.2e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   330 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 388

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   389 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 448

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   449 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 508

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   509 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 550


>UNIPROTKB|F1PID8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
            Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
        Length = 736

 Score = 331 (121.6 bits), Expect = 5.3e-29, P = 5.3e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   332 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 390

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   391 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 450

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   451 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 510

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   511 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 552


>UNIPROTKB|F1SKQ0 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
            EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
        Length = 736

 Score = 331 (121.6 bits), Expect = 5.3e-29, P = 5.3e-29
 Identities = 74/222 (33%), Positives = 128/222 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   332 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 390

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   391 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 450

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   451 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 510

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   511 TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 552


>CGD|CAL0001638 [details] [associations]
            symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
            RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
            SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
            KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
        Length = 399

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 77/223 (34%), Positives = 127/223 (56%)

Query:     5 GFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKL 64
             GF+E +  I ++LPP  Q ++ SAT+P  V +++ K+  +P+ I LV  +DE    GIK 
Sbjct:   184 GFKEQIYEIYKHLPPSVQVVVVSATLPREVLEMTSKFTTDPVKI-LV-KRDEISLSGIKQ 241

Query:    65 YAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRD----ADEVSLALTSIIASEALHG 119
             Y +       K   L DL        + ++F  TK      AD++     +++A   +HG
Sbjct:   242 YYVQCEREDWKFDTLCDLYDNLTIT-QAVIFCNTKLKVNWLADQMKKQNFTVVA---MHG 297

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q +R+  +N FR+G   VL++TDV ARG+D+  V L+I+Y+LP D E ++HR GR+G
Sbjct:   298 DMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSG 357

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             R G++GTAI + T     T++  E+    K + + P  + D++
Sbjct:   358 RFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEM-PMNINDIM 399


>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
            symbol:PF14_0437 "helicase, truncated,
            putative" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
            MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
            GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 325 (119.5 bits), Expect = 6.9e-29, P = 6.9e-29
 Identities = 76/224 (33%), Positives = 125/224 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYL-DNPLNIDLVGNQDEKLA 59
             ML +GFE  +  I++ + P RQ++++SAT P  V+ L++    + P+ ++ VG+      
Sbjct:   272 MLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTAC 330

Query:    60 EGIKLYAISTTATSKRTILSDLIT-VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEAL 117
               IK          K   L  L+  ++    + IVF +TK++AD ++ AL    + +  +
Sbjct:   331 RSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD  Q +R   LN F+ GK  +++ATDVA+RGLDI NV  +I+++ PN  E +VHR GR
Sbjct:   391 HGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGR 450

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV 221
             TGRAG  G +    T+ + R  + L + +  + E   PP +E +
Sbjct:   451 TGRAGSHGASFTFLTADKYRLAKDLVKILR-ESEQPVPPQLEKI 493


>UNIPROTKB|Q8IL13 [details] [associations]
            symbol:PF14_0437 "Helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
            ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
            PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
            KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 325 (119.5 bits), Expect = 6.9e-29, P = 6.9e-29
 Identities = 76/224 (33%), Positives = 125/224 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYL-DNPLNIDLVGNQDEKLA 59
             ML +GFE  +  I++ + P RQ++++SAT P  V+ L++    + P+ ++ VG+      
Sbjct:   272 MLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTAC 330

Query:    60 EGIKLYAISTTATSKRTILSDLIT-VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEAL 117
               IK          K   L  L+  ++    + IVF +TK++AD ++ AL    + +  +
Sbjct:   331 RSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD  Q +R   LN F+ GK  +++ATDVA+RGLDI NV  +I+++ PN  E +VHR GR
Sbjct:   391 HGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGR 450

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV 221
             TGRAG  G +    T+ + R  + L + +  + E   PP +E +
Sbjct:   451 TGRAGSHGASFTFLTADKYRLAKDLVKILR-ESEQPVPPQLEKI 493


>UNIPROTKB|Q4K4K3 [details] [associations]
            symbol:dbpA "ATP-independent RNA helicase DbpA"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
            ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
            KEGG:pfl:PFL_5772 PATRIC:19881049
            BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
        Length = 461

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 74/205 (36%), Positives = 117/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF + +E I+E  P +RQ++LFSAT P  +K+L+ K++ +P  +      D+   E
Sbjct:   161 MLDMGFYDAIEDIIEKTPSRRQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIE 220

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
               + Y IS     +R      +  + +    + F  TK+   E    LT+  I++  LHG
Sbjct:   221 Q-RFYEISP---EERMSAVTKVLHHFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHG 276

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D+ Q  R++ L  F     +VLVATDVAARGLDI  +D++I+ EL  D E  +HR GRTG
Sbjct:   277 DLEQRDRDQVLAMFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTG 336

Query:   180 RAGKEGTAILMFTSSQRRTVRSLER 204
             RAG++G A+ +   S+    +++E+
Sbjct:   337 RAGEKGIAVSLVAPSEAHRAQAIEQ 361


>ZFIN|ZDB-GENE-031030-2 [details] [associations]
            symbol:eif4a1a "eukaryotic translation initiation
            factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
            IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
            STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
            KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
            Uniprot:Q802C9
        Length = 406

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 73/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP  V +++ K++ +P+ I LV  ++E   E
Sbjct:   187 MLSRGFKDQIYEIFQKLATDTQVILLSATMPQEVLEVTTKFMRDPVRI-LV-KKEELTLE 244

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   245 GIRQFYINVEKEEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSALH 303

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   304 GDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI M T   +RT+R +E
Sbjct:   364 GRFGRKGVAINMITEDDKRTLRDIE 388


>UNIPROTKB|Q0C4B9 [details] [associations]
            symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
            GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
            BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
        Length = 536

 Score = 325 (119.5 bits), Expect = 7.6e-29, P = 7.6e-29
 Identities = 83/230 (36%), Positives = 132/230 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D+E I   LP  RQ++LFSAT P+ +++L++ +  +P  I++   +  + AE
Sbjct:   161 MLDMGFIPDIEKICAKLPANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVT--RPAQTAE 218

Query:    61 GIKLYAI---STTATSKRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA 116
              I  + +   +    ++RT L  +I     K G  IVF   K + D V+ +LT      A
Sbjct:   219 TISQFVVKLPTNDGKARRTALRRVIEATNVKNG--IVFCNRKVEVDIVAASLTKHGHDAA 276

Query:   117 -LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 175
              +HGD+ Q  R  TL  FR GK  +LVA+DVAARGLDIP+V  + ++  P   E +VHR 
Sbjct:   277 PIHGDLPQSVRSETLQRFRDGKLKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRI 336

Query:   176 GRTGRAGKEGTAILMFTSSQRRT----VRSLERDVGCKFEFVSPPVVEDV 221
             GRTGRAG+ G +  + T +  ++    V+ +++DV    EF+   ++E++
Sbjct:   337 GRTGRAGRTGESYTVVTPADDKSWGFVVKMIKKDVP---EFMPEGLLEEL 383


>TAIR|locus:2034481 [details] [associations]
            symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
            "RNA methylation" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
            EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
            OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
            IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
            UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
            PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
            KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
            PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
            GermOnline:AT1G31970 Uniprot:Q9C551
        Length = 537

 Score = 325 (119.5 bits), Expect = 7.7e-29, P = 7.7e-29
 Identities = 91/266 (34%), Positives = 143/266 (53%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLD-NPLNIDLVGNQDEKLA 59
             ML +GFEE V  IL N    RQ ++FSAT P  V KL+++++D NP+ + ++G+ D    
Sbjct:   277 MLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKV-IIGSVDLAAN 335

Query:    60 EGIK--LYAISTTATSKRTILSDLITVYAKGGKT--IVFTQTKRDADEVSLALTSI-IAS 114
               +   +  +   A  +R I   L+  Y K  K   +VF   K +A+ +   L      +
Sbjct:   336 HDVMQIIEVLDERARDQRLIA--LLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKA 393

Query:   115 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 174
              ++HG+ +Q +R R+L+ F++G   +LVATDVAARGLDIP+V+++I+Y  P   E +VHR
Sbjct:   394 VSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHR 453

Query:   175 SGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLE--SSAEQVVAT 232
              GRTGRAGK+G A   FT   +     L   V    E     V  D+L+  +  ++  + 
Sbjct:   454 IGRTGRAGKKGVAHTFFTPLNKGLAGEL---VNVLRE-AGQVVPADLLKFGTHVKKKESK 509

Query:   233 LNGVHPESVEFFTPTAQRLIEEKGTD 258
             L G H + +    P A ++  +   D
Sbjct:   510 LYGAHFKEIAADAPKATKITFDNSDD 535


>UNIPROTKB|Q9KLH6 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
            family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 72/206 (34%), Positives = 123/206 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D++ +L  L P RQ++ FSAT  S +K ++ + + +P+ + +  +     AE
Sbjct:   167 MLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNST--AE 224

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALH 118
              ++          KR +LS LI       + +VFT+T++ +D ++  L L  I A  +++
Sbjct:   225 TVQQMVYPVDKKRKRELLSYLIGS-KNWQQVLVFTKTRQGSDALAEELKLDGIKAV-SIN 282

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD SQ  R++ L+ F+ GK   L+ATDVAARGLDI  ++ +++Y++P   E +VHR GRT
Sbjct:   283 GDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRT 342

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GRAG  G A+ + +  ++  + ++ER
Sbjct:   343 GRAGLAGLAVSLLSHDEQPQLEAIER 368


>TIGR_CMR|CPS_3401 [details] [associations]
            symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
            STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
            OMA:HLIKEHQ ProtClustDB:CLSK907013
            BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
        Length = 432

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 70/190 (36%), Positives = 113/190 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML++GF E++  +L   P K+Q++LFSAT P  V  L+++ L+NP+ I L       L +
Sbjct:   173 MLSLGFTEELTALLALTPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADASTLVQ 232

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALH 118
               +++ ++     K  +L+ LI    +  + ++F   K   + ++  LA   I A+   H
Sbjct:   233 --RVFTVNKG--EKTAVLAHLIQ-QEQWRQALIFVNAKHHCEHLAEKLAKRGITAA-VFH 286

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD  Q +R R L+GF+ G   VL+ATD+AARGLDI  + ++I++ LP  P  ++HR GR+
Sbjct:   287 GDKGQSERSRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRS 346

Query:   179 GRAGKEGTAI 188
             GRAG+ G AI
Sbjct:   347 GRAGEVGLAI 356


>TIGR_CMR|VC_A0768 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 72/206 (34%), Positives = 123/206 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D++ +L  L P RQ++ FSAT  S +K ++ + + +P+ + +  +     AE
Sbjct:   167 MLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNST--AE 224

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALH 118
              ++          KR +LS LI       + +VFT+T++ +D ++  L L  I A  +++
Sbjct:   225 TVQQMVYPVDKKRKRELLSYLIGS-KNWQQVLVFTKTRQGSDALAEELKLDGIKAV-SIN 282

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD SQ  R++ L+ F+ GK   L+ATDVAARGLDI  ++ +++Y++P   E +VHR GRT
Sbjct:   283 GDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRT 342

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GRAG  G A+ + +  ++  + ++ER
Sbjct:   343 GRAGLAGLAVSLLSHDEQPQLEAIER 368


>WB|WBGene00002244 [details] [associations]
            symbol:laf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
            EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
            ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
            KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
            ArrayExpress:D0PV95 Uniprot:D0PV95
        Length = 708

 Score = 328 (120.5 bits), Expect = 1.0e-28, P = 1.0e-28
 Identities = 80/210 (38%), Positives = 117/210 (55%)

Query:     1 MLAVGFEEDVELILE--NLPPKRQSM--LFSATMPSWVKKLSRKYL-DNP--LNIDLVGN 53
             ML +GFE  +  I+E   +P K + +  +FSAT P  ++ L++ +L +N   L +  VG+
Sbjct:   402 MLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGS 461

Query:    54 QDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SII 112
               E + + I    +      KR+ L DL+        T+VF +TKR A +++  L     
Sbjct:   462 TSENIMQKI----VWVEEDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNY 517

Query:   113 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 172
                 +HGD+ Q +RE+ L+ FR G   +LVAT VAARGLDIPNV  +I+Y+LP+D + +V
Sbjct:   518 EVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYV 577

Query:   173 HRSGRTGRAGKEGTAILMFTSSQRRTVRSL 202
             HR GRTGR G  G A   F    R   R L
Sbjct:   578 HRIGRTGRVGNVGLATSFFNDKNRNIAREL 607


>DICTYBASE|DDB_G0287361 [details] [associations]
            symbol:ddx41 "DEAD box protein abstrakt"
            species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
            EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
            IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
            KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
        Length = 671

 Score = 310 (114.2 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
 Identities = 64/188 (34%), Positives = 111/188 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ++ +GFE+D+  +L+N   +RQ++LFSATMP  +++ +R  L  P+ ++ VG      A 
Sbjct:   391 LIDLGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVN-VGRAG---AA 446

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHG 119
              + +         +  I+  L  +       ++F + K+D D++    L   + + ++HG
Sbjct:   447 NLNVTQEVEFVKPEAKIVYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHG 506

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             D SQ +RE  +  FR+GK  VLVATDVA++GLD P +  +I++++P + E ++HR GRTG
Sbjct:   507 DKSQDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTG 566

Query:   180 RAGKEGTA 187
             R G +G A
Sbjct:   567 RRGNKGVA 574

 Score = 41 (19.5 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
 Identities = 7/15 (46%), Positives = 7/15 (46%)

Query:   478 CFNCGKSGHRASECP 492
             C  C   GHR   CP
Sbjct:   637 CEYCDGRGHRLVNCP 651


>UNIPROTKB|Q9KMW4 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 76/209 (36%), Positives = 125/209 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLV-GNQDEKLA 59
             ML +GF  D+  IL+ LP KRQ++LFSAT  + +++L++  ++NP+ I +   N   +  
Sbjct:   159 MLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTV 218

Query:    60 EGIKLYAISTTATSKRTILSDLITVYAKGG---KTIVFTQTKRDADEVSLALTSI-IASE 115
             E   +Y     A  K+    D++    K G   + +VF +TK  A+ ++  L    + + 
Sbjct:   219 EQC-IYP----ADVKKK--PDMLVKLVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAA 271

Query:   116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 175
             A+HG+ SQ  R R L  F+ G+  +LVATD+AARG+DIP +  ++++ELP   E +VHR 
Sbjct:   272 AIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRI 331

Query:   176 GRTGRAGKEGTAILMFTSSQRRTVRSLER 204
             GRTGRAG+ G AI + ++ +   + ++ER
Sbjct:   332 GRTGRAGEVGKAISLVSAIEAPELFAIER 360


>TIGR_CMR|VC_A0204 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 76/209 (36%), Positives = 125/209 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLV-GNQDEKLA 59
             ML +GF  D+  IL+ LP KRQ++LFSAT  + +++L++  ++NP+ I +   N   +  
Sbjct:   159 MLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTV 218

Query:    60 EGIKLYAISTTATSKRTILSDLITVYAKGG---KTIVFTQTKRDADEVSLALTSI-IASE 115
             E   +Y     A  K+    D++    K G   + +VF +TK  A+ ++  L    + + 
Sbjct:   219 EQC-IYP----ADVKKK--PDMLVKLVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAA 271

Query:   116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 175
             A+HG+ SQ  R R L  F+ G+  +LVATD+AARG+DIP +  ++++ELP   E +VHR 
Sbjct:   272 AIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRI 331

Query:   176 GRTGRAGKEGTAILMFTSSQRRTVRSLER 204
             GRTGRAG+ G AI + ++ +   + ++ER
Sbjct:   332 GRTGRAGEVGKAISLVSAIEAPELFAIER 360


>UNIPROTKB|B4DLW8 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
            HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
            STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
            Uniprot:B4DLW8
        Length = 535

 Score = 323 (118.8 bits), Expect = 1.3e-28, P = 1.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   174 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 232

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   233 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 292

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   293 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 352

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   353 TARSTKTGTAYTFFTPNNIKQVSDL 377


>TAIR|locus:2008296 [details] [associations]
            symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
            "embryo sac egg cell differentiation" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
            EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
            RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
            SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
            GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
            InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
            ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
            Uniprot:Q9C8J1
        Length = 392

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 77/215 (35%), Positives = 122/215 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ G ++ +  +   LP   Q  L SAT+P  + +++ K++ +P+ I LV   DE   E
Sbjct:   176 MLSKGLKDQIYDVYRALPHDIQVCLISATLPQEILEMTEKFMTDPVRI-LV-KPDELTLE 233

Query:    61 GIKLYAISTTATS-KRTILSDL---ITVYAKGGKTIVFTQTKRDADEVSLALTS--IIAS 114
             GIK Y +       K   L DL   +T+     + I+F  T++  D ++  + S   I S
Sbjct:   234 GIKQYYVDVDKEEWKFDTLCDLYGRLTI----NQAIIFCNTRQKVDWLTEKMRSSNFIVS 289

Query:   115 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 174
              ++HGD  Q +R+  +N FR  K  VL+A+DV ARG+D+  V  +I+Y++PN+PE ++HR
Sbjct:   290 -SMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHR 348

Query:   175 SGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 209
              GR GR G+EG AI    SS  + ++ +ER  G K
Sbjct:   349 IGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTK 383


>WB|WBGene00010260 [details] [associations]
            symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
            RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
            STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
            EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
            EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
            KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
            WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
            ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
        Length = 561

 Score = 323 (118.8 bits), Expect = 1.6e-28, P = 1.6e-28
 Identities = 73/205 (35%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  ++ I+  + P RQ+++FSAT P  V+ L+  +  +   ++ VG+ +     
Sbjct:   288 MLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLN-VGSLELAANH 346

Query:    61 GIKLYAISTTATSKRTILSDLIT--VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I          +K+  L +L+   +  K  KTI+F +TKR ADE++ A+      +  +
Sbjct:   347 NITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCI 406

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD +Q +R+  L  F+ GK  +++ATDVAARGLD+ ++  +I+Y+ PN+ E +VHR GR
Sbjct:   407 HGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGR 466

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             TGR+ K+GTA   FT +     + L
Sbjct:   467 TGRSDKKGTAYTFFTHTNASKAKDL 491


>DICTYBASE|DDB_G0293064 [details] [associations]
            symbol:DDB_G0293064 species:44689 "Dictyostelium
            discoideum" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
            RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
            EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
            InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
        Length = 573

 Score = 323 (118.8 bits), Expect = 1.8e-28, P = 1.8e-28
 Identities = 67/195 (34%), Positives = 118/195 (60%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQ---DEK 57
             ++ +GFE+ ++ I  ++ P RQ + +SAT P  V   + K++  P+ + +  +Q   ++ 
Sbjct:   298 LMEMGFEQQIDGIFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKN 357

Query:    58 LAEGIKLYAISTTATSKRTILSDLITVYAKGGK--TIVFTQTKRDADEVSLALTSI---I 112
             +++  K+  + T A     ++  L  +Y+   K  T++FT TK+ AD +   + S    +
Sbjct:   358 ISQKFKI--VPTDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNV 415

Query:   113 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 172
               + LHGD+ Q++RER +  F+  +  ++VATDVA+RGLDI  +  +I++ LP+D ET+V
Sbjct:   416 RIDTLHGDVDQNRRERIVQDFKNKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYV 475

Query:   173 HRSGRTGRAGKEGTA 187
             HR GRTGRAG  GT+
Sbjct:   476 HRIGRTGRAGALGTS 490


>UNIPROTKB|A4QSS5 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase DBP2"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
            ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
            KEGG:mgr:MGG_16901 Uniprot:A4QSS5
        Length = 548

 Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 70/207 (33%), Positives = 122/207 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I+  + P RQ++++SAT P  V+ ++  +L + + ++ +G+ D     
Sbjct:   284 MLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVN-IGSLDLSANH 342

Query:    61 GIK--LYAISTTATSKRTI--LSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASE 115
              I   +  +S +    R I  +  ++       K ++F  TKR ADE++  L      + 
Sbjct:   343 RITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPAL 402

Query:   116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 175
             ++HGD  Q++R+  L+ F+ GK  ++VATDVA+RG+D+ N+  +++Y+ PN+ E ++HR 
Sbjct:   403 SIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 462

Query:   176 GRTGRAGKEGTAILMFTSSQRRTVRSL 202
             GRTGRAG +GTAI  FT+   +  R L
Sbjct:   463 GRTGRAGAKGTAITFFTTENSKQARDL 489


>ASPGD|ASPL0000014018 [details] [associations]
            symbol:fal1 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
            ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
            EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
            OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
        Length = 399

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 76/224 (33%), Positives = 124/224 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L  GF E +  +   LPP  Q ++ SAT+P  V  ++ K++ +P+ + LV  +DE   E
Sbjct:   179 LLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRV-LV-KRDELTLE 236

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK Y I+      K   L DL        + ++F  T+R  D ++  +        ++H
Sbjct:   237 GIKQYFIAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTDKMREANFTVSSMH 295

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G++ Q +R+  +  FRQG   VL++TDV ARG+D+  V L+I+Y+LP + E ++HR GR+
Sbjct:   296 GEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRS 355

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI   TS   R +R +E     + + + P  V D+L
Sbjct:   356 GRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEM-PMNVADLL 398


>SGD|S000002428 [details] [associations]
            symbol:FAL1 "Nucleolar protein required for maturation of 18S
            rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
            EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
            OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
            RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
            SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
            STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
            GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
            CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
            Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
            Uniprot:Q12099
        Length = 399

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 72/203 (35%), Positives = 119/203 (58%)

Query:     4 VGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIK 63
             +GF++ +  I   LP   Q ++ SATM   + +++RK++++P+ I LV  +DE   EGIK
Sbjct:   183 LGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKI-LV-KRDEISLEGIK 240

Query:    64 LYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDI 121
              Y ++      K   L D+        + ++F  TK+  D +S  L  S  A  ++HGD+
Sbjct:   241 QYVVNVDKEEWKFDTLCDIYDSLTIT-QCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDM 299

Query:   122 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA 181
              Q +R++ +N FR G   VL++TDV ARG+D+  V L+I+Y+LP   E ++HR GR+GR 
Sbjct:   300 KQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRF 359

Query:   182 GKEGTAILMFTSSQRRTVRSLER 204
             G++G AI   T +    +R +E+
Sbjct:   360 GRKGVAINFITKADLAKLREIEK 382


>TAIR|locus:2065215 [details] [associations]
            symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
            HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
            IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
            ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
            PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
            KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
            OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
            Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
        Length = 760

 Score = 326 (119.8 bits), Expect = 2.0e-28, P = 2.0e-28
 Identities = 82/225 (36%), Positives = 124/225 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDL--VGNQDEKL 58
             M  +GFE  V  I+  + P RQ++LFSATMP  V+KL+R+ L +P+ + +  VG  +E +
Sbjct:   387 MFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDI 446

Query:    59 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEAL 117
              + + +  I + A     +L  L  +  +G   +VF   K   DE+   LT +     AL
Sbjct:   447 TQVVNV--IPSDAEKLPWLLEKLPGMIDEGD-VLVFASKKATVDEIEAQLTLNSFKVAAL 503

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD  Q  R  TL  F+ G   VL+ATDVAARGLDI ++  +++Y++  D +  VHR GR
Sbjct:   504 HGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGR 563

Query:   178 TGRAG-KEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV 221
             TGRAG ++G A  + T  + R    L   +    + V PP + D+
Sbjct:   564 TGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNV-PPELTDL 607


>UNIPROTKB|F1MBQ8 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
            class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
            receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IEA] [GO:0036002
            "pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
            GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
            EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
            UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
            Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
            NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
        Length = 614

 Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|J3KTA4 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
            Ensembl:ENST00000578804 Uniprot:J3KTA4
        Length = 614

 Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|P17844 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0045069 "regulation of viral genome replication"
            evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
            [GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IMP] [GO:0072332
            "intrinsic apoptotic signaling pathway by p53 class mediator"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
            "regulation of skeletal muscle cell differentiation" evidence=ISS]
            [GO:0045667 "regulation of osteoblast differentiation"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0050681
            "androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
            of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
            "positive regulation of intracellular estrogen receptor signaling
            pathway" evidence=IDA] [GO:0003713 "transcription coactivator
            activity" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
            "pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
            GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
            GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
            GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
            EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
            RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
            PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
            IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
            DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
            PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
            Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
            CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
            HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
            InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
            EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
            ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
            Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
        Length = 614

 Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|A5A6J2 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
            CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
            UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
            GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
            Uniprot:A5A6J2
        Length = 614

 Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|Q5R4I9 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
            GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
            RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
            PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
            Uniprot:Q5R4I9
        Length = 614

 Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>MGI|MGI:105037 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=ISO] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IDA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
            receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0060765 "regulation of androgen receptor signaling pathway"
            evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
            p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
            GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
            ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
            UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
            DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
            PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
            Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
        Length = 614

 Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>RGD|619906 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
            activity" evidence=ISO] [GO:0003713 "transcription coactivator
            activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
            rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
            evidence=IDA] [GO:0030331 "estrogen receptor binding"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
            "pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=IDA] [GO:0050681 "androgen receptor binding"
            evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
            signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
            signaling pathway by p53 class mediator" evidence=IEA;ISO]
            [GO:2001014 "regulation of skeletal muscle cell differentiation"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
            GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
            EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
            UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
            Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
            UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
            Genevestigator:Q6AYI1 Uniprot:Q6AYI1
        Length = 615

 Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>ZFIN|ZDB-GENE-030131-18 [details] [associations]
            symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
            UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
            KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
            Uniprot:F1QBS1
        Length = 671

 Score = 324 (119.1 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 76/222 (34%), Positives = 124/222 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + + I+ +G  +     
Sbjct:   254 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQIN-IGALELSANH 312

Query:    61 GIKLYAISTTATSKRTILSDLIT-VYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I           K   L  L+  + A K  KTI+F +TK+  DE++  +      +  +
Sbjct:   313 NILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCI 372

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  L  FR GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GR
Sbjct:   373 HGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 432

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             T R+  +GTA   FT    R  R L R +    + ++P +++
Sbjct:   433 TARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQ 474


>ZFIN|ZDB-GENE-040120-6 [details] [associations]
            symbol:eif4a1b "eukaryotic translation initiation
            factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
            IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
            SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
        Length = 429

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 73/205 (35%), Positives = 116/205 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V  ++ K++  P+ I LV  ++E   E
Sbjct:   210 MLSRGFKDQIYEIFQKLSTSIQVVLLSATMPAEVLDVTTKFMREPVRI-LV-KKEELTLE 267

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   268 GIRQFYINVEKEEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSALH 326

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q  R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   327 GDMDQKDRDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 386

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI M T   +RT+R +E
Sbjct:   387 GRFGRKGVAINMVTEDDKRTLRDIE 411


>UNIPROTKB|Q8EE19 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 317 (116.6 bits), Expect = 2.5e-28, P = 2.5e-28
 Identities = 74/208 (35%), Positives = 120/208 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+  I+E LP +RQ++LFSAT+   VK L++  + + + I++  ++    + 
Sbjct:   159 MLDMGFIEDINNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEI--SRKNAAST 216

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I  +  +     K  +LS LI       + ++F QTK  A ++   L    I +EA H 
Sbjct:   217 QIDQWLTTVDKDRKSALLSHLIKEN-NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHS 275

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
               SQ  RE+ L  F+ GK   LVAT V +RG+DI  ++ +I+Y+LP++ + ++HR GRTG
Sbjct:   276 GRSQAIREQLLIDFKAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTG 335

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVG 207
             RAG +G AI   +    R + ++ER +G
Sbjct:   336 RAGNQGEAISFVSKDDFRNLCAIERRLG 363


>TIGR_CMR|SO_2571 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 317 (116.6 bits), Expect = 2.5e-28, P = 2.5e-28
 Identities = 74/208 (35%), Positives = 120/208 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF ED+  I+E LP +RQ++LFSAT+   VK L++  + + + I++  ++    + 
Sbjct:   159 MLDMGFIEDINNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEI--SRKNAAST 216

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              I  +  +     K  +LS LI       + ++F QTK  A ++   L    I +EA H 
Sbjct:   217 QIDQWLTTVDKDRKSALLSHLIKEN-NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHS 275

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
               SQ  RE+ L  F+ GK   LVAT V +RG+DI  ++ +I+Y+LP++ + ++HR GRTG
Sbjct:   276 GRSQAIREQLLIDFKAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTG 335

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVG 207
             RAG +G AI   +    R + ++ER +G
Sbjct:   336 RAGNQGEAISFVSKDDFRNLCAIERRLG 363


>TIGR_CMR|CPS_1125 [details] [associations]
            symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
            ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
            KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
            BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
        Length = 466

 Score = 316 (116.3 bits), Expect = 2.7e-28, P = 2.7e-28
 Identities = 77/247 (31%), Positives = 137/247 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GF  D++ ++  LP  RQ++LFSAT    ++ L++  ++NPL I +  + +   AE
Sbjct:   166 MLDMGFIRDIKKLMTALPKDRQNLLFSATFSPEIRALAKGMVNNPLEISV--DAENSTAE 223

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              +  +  +     K  +L+ LI       + +VFT+TK  A++++  L +  + + A+HG
Sbjct:   224 KVTQWLTAVDKKRKPAVLTHLIKEN-NWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHG 282

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
             + SQ  R + L  F+ G   +LVATD+AARG+DI  +  +++++LPN PE +VHR GRT 
Sbjct:   283 NKSQGARTKALAAFKDGSVKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTA 342

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL---ESSAEQVVATLN-G 235
             RAG  G A+ +  + +   +  +E  +    + +   V+E  +   E    +V+  L  G
Sbjct:   343 RAGNTGQALSLVCADELDLLWGIEHVIQ---QHIERKVIEKFIPANELGESRVIKPLKQG 399

Query:   236 VHPESVE 242
               P+S +
Sbjct:   400 KPPKSAK 406


>UNIPROTKB|F1PEA6 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] [GO:0003712 "transcription cofactor
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
            Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
        Length = 671

 Score = 323 (118.8 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 71/205 (34%), Positives = 120/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   310 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 368

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   369 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 428

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R+  LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   429 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 488

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   489 TARSTKTGTAYTFFTPNNIKQVSDL 513


>FB|FBgn0037549 [details] [associations]
            symbol:CG7878 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
            UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
            GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
            FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
            GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
        Length = 703

 Score = 323 (118.8 bits), Expect = 3.5e-28, P = 3.5e-28
 Identities = 68/194 (35%), Positives = 115/194 (59%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  ++ ++ P RQ+++ SAT P  V++L++ Y+ NP+ +  VG+ D     
Sbjct:   442 MLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQV-CVGSLDLAATH 500

Query:    61 GIK-LYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALH 118
              +K +  +      K   ++  +   +   K I+F   K  AD++S  LT     ++ +H
Sbjct:   501 SVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIH 560

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G+  Q  RE+ +   + G   +LVATDVA+RGLDI ++  +I+Y+ P++ E +VHR GRT
Sbjct:   561 GNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRT 620

Query:   179 GRAGKEGTAILMFT 192
             GRAG++GT+I  FT
Sbjct:   621 GRAGRQGTSISFFT 634


>UNIPROTKB|Q3SZ65 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
            OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
            RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
            SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
            GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
            OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
        Length = 407

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:   188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   246 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   305 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   365 GRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|E2R3J1 [details] [associations]
            symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
            SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
            KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
        Length = 407

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:   188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   246 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   305 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   365 GRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|Q14240 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
            "helicase activity" evidence=TAS] [GO:0006446 "regulation of
            translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
            translation initiation factor 4F complex" evidence=TAS] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
            GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
            GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
            CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
            EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
            IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
            UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
            ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
            STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
            PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
            Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
            UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
            HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
            PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
            EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
            PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
            Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
        Length = 407

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:   188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   246 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   305 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   365 GRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|Q9NZE6 [details] [associations]
            symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
            UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
            IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
            UCSC:uc003fqv.3 Uniprot:Q9NZE6
        Length = 312

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:    93 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 150

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   151 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 209

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   210 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 269

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   270 GRFGRKGVAINFVTEEDKRILRDIE 294


>UNIPROTKB|A6M930 [details] [associations]
            symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
            isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
            ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
            Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
            Uniprot:A6M930
        Length = 407

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:   188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   246 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   305 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   365 GRFGRKGVAINFVTEEDKRILRDIE 389


>MGI|MGI:1915005 [details] [associations]
            symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
            GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
            GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
            GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
            OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
            EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
            ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
            PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
            Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
            InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
            Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
        Length = 455

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 75/223 (33%), Positives = 126/223 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L + FE +V+ IL+ +P  R++ LFSATM   V+KL R  L NP+   +  +   +  E
Sbjct:   179 ILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVE 236

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              ++ Y +   +  K T L  ++   A G   ++F  T  +    +L L ++   +  LHG
Sbjct:   237 KLQQYYLFIPSKFKDTYLVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 295

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              +SQ +R  +LN F+    ++L+ATDVA+RGLDIP+VD+++++++P   + ++HR GRT 
Sbjct:   296 QMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTA 355

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             RAG+ G AI   T       + +E  +G K   V P   E+V+
Sbjct:   356 RAGRSGKAITFVTQYDVELFQRIEHLIGKKLP-VFPTQDEEVM 397


>MGI|MGI:106906 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
            OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
            EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
            RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
            SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
            PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
            Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
            NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
            GermOnline:ENSMUSG00000022884 Uniprot:P10630
        Length = 407

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:   188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   246 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   305 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   365 GRFGRKGVAINFVTEEDKRILRDIE 389


>POMBASE|SPAC1F5.10 [details] [associations]
            symbol:SPAC1F5.10 "ATP-dependent RNA helicase
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
            OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
            ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
            EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
            NextBio:20802696 Uniprot:Q10055
        Length = 394

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 71/206 (34%), Positives = 117/206 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L  GF+E +  I   LPP  Q ++ SAT+P  V +++ K+  NP+ I LV  +DE   E
Sbjct:   175 LLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRI-LV-KRDELTLE 232

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             G+K Y I+      K   L DL        + ++F  ++R  D ++  +        ++H
Sbjct:   233 GLKQYFIAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNSRRKVDWLTEKMREANFTVTSMH 291

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G++ Q +R+  +  FRQG   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR+
Sbjct:   292 GEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRS 351

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GR G++G AI   T+   R +R +E+
Sbjct:   352 GRFGRKGVAINFVTNEDVRILRDIEQ 377


>RGD|1309225 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10116 "Rattus norvegicus" [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
            RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
            SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
            World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
            UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
            ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
            GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
        Length = 407

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:   188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   246 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   305 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   365 GRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|F1LP27 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
            Uniprot:F1LP27
        Length = 312

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:    93 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 150

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   151 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 209

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   210 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 269

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   270 GRFGRKGVAINFVTEEDKRILRDIE 294


>UNIPROTKB|F8WFX2 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
            Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
        Length = 408

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 72/205 (35%), Positives = 118/205 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP+ V ++++K++ +P+ I LV  ++E   E
Sbjct:   189 MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLE 246

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   247 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 305

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   306 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 365

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   366 GRFGRKGVAINFVTEEDKRILRDIE 390


>UNIPROTKB|G3V727 [details] [associations]
            symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
            GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
            RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
            GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
            Uniprot:G3V727
        Length = 455

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 75/223 (33%), Positives = 126/223 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L + FE +V+ IL+ +P  R++ LFSATM   V+KL R  L NP+   +  +   +  E
Sbjct:   179 ILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVE 236

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              ++ Y +   +  K T L  ++   A G   ++F  T  +    +L L ++   +  LHG
Sbjct:   237 KLQQYYLFIPSKFKDTYLVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 295

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              +SQ +R  +LN F+    ++L+ATDVA+RGLDIP+VD+++++++P   + ++HR GRT 
Sbjct:   296 QMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTA 355

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             RAG+ G AI   T       + +E  +G K   V P   E+V+
Sbjct:   356 RAGRSGKAITFVTQYDVELFQRIEHLIGKKLP-VFPTQDEEVM 397


>ZFIN|ZDB-GENE-050522-359 [details] [associations]
            symbol:zgc:112350 "zgc:112350" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
            EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
            UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
            KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
        Length = 512

 Score = 317 (116.6 bits), Expect = 4.6e-28, P = 4.6e-28
 Identities = 89/282 (31%), Positives = 147/282 (52%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             +L + FE +V+ IL+ +P  R++ LFSATM   V+KL R  L +P+   +  +      +
Sbjct:   234 ILNMDFESEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSV--SSKYATVD 291

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 119
              ++ + I   +  K   L  ++   A G   +VF  T  +   V+L L ++ I +  LHG
Sbjct:   292 KLQQFYIFIPSKYKDCYLVSILNELA-GNSFMVFCGTCNNTQRVALLLRNLGITAIPLHG 350

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              +SQ++R   LN F+    +VL+ATDVA+RGLDIP+VD +I++++P   + ++HR GRT 
Sbjct:   351 QMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTA 410

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL---ESSAE-QVVATLNG 235
             RAG+ G +I   T       + +E  +G K     P   E+V+   E  +E Q  A +  
Sbjct:   411 RAGRSGKSITFVTQYDVELFQRIEALIGKKLP-AFPTQEEEVMMLVERVSEAQRFARIE- 468

Query:   236 VHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSR 277
             +   S +   P+A + ++E G  +         G  R PS R
Sbjct:   469 MKESSEKRKRPSAAQEVDEDGEQSSGVRKKVKGGGFRRPSRR 510


>ZFIN|ZDB-GENE-080204-77 [details] [associations]
            symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
            EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
            Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
        Length = 719

 Score = 322 (118.4 bits), Expect = 4.7e-28, P = 4.7e-28
 Identities = 71/204 (34%), Positives = 114/204 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I+ ++ P RQ+++ SAT P  V++L++ YL +P+ +  VG  D     
Sbjct:   437 MLDMGFEPQIMKIILDIRPDRQTVMTSATWPPGVRRLAKSYLKDPMMV-YVGTLDLAAVN 495

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALH 118
              ++   +      K+  + D I       K ++F   K  AD++S  L L  I A ++LH
Sbjct:   496 TVQQTVLFVQEDEKKDYVFDFIHRMEPLDKVLIFVGKKLKADDLSSDLCLQGI-AVQSLH 554

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD  Q  RE  L  F+ G+  +LVATD+A+RGLD+ ++  + +Y+ P + E +VHR GRT
Sbjct:   555 GDREQCDREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRT 614

Query:   179 GRAGKEGTAILMFTSSQRRTVRSL 202
             GRAG+ G ++ + T    R    L
Sbjct:   615 GRAGRSGESVTLVTREDWRVAAEL 638


>UNIPROTKB|Q7L014 [details] [associations]
            symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
            IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
            ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
            MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
            PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
            Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
            KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
            HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
            PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
            NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
            CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
            Uniprot:Q7L014
        Length = 1031

 Score = 325 (119.5 bits), Expect = 4.7e-28, P = 4.7e-28
 Identities = 83/262 (31%), Positives = 135/262 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 591

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++   I      K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   592 DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 651

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+ ++ L+++Y  PN  E +VHR+GRTG
Sbjct:   652 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 711

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL-----ESSAE-QVVATL 233
             RAG +G A    T  Q R    + + +      V PP +E +      +  AE +++   
Sbjct:   712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKAEGKIIKKS 770

Query:   234 NGVHPESVEFFTPTAQRLIEEK 255
             +G   +  +F   T Q L  E+
Sbjct:   771 SGFSGKGFKF-DETEQALANER 791


>UNIPROTKB|F1MX40 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
            EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
            Uniprot:F1MX40
        Length = 1032

 Score = 325 (119.5 bits), Expect = 4.8e-28, P = 4.8e-28
 Identities = 83/262 (31%), Positives = 135/262 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 591

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++   I      K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   592 DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 651

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+ ++ L+++Y  PN  E +VHR+GRTG
Sbjct:   652 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 711

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL-----ESSAE-QVVATL 233
             RAG +G A    T  Q R    + + +      V PP +E +      +  AE +++   
Sbjct:   712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKAEGKIIKKS 770

Query:   234 NGVHPESVEFFTPTAQRLIEEK 255
             +G   +  +F   T Q L  E+
Sbjct:   771 SGFSGKGFKF-DETEQALANER 791


>UNIPROTKB|F1PK90 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
            Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
        Length = 1032

 Score = 325 (119.5 bits), Expect = 4.8e-28, P = 4.8e-28
 Identities = 83/262 (31%), Positives = 135/262 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 591

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++   I      K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   592 DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 651

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+ ++ L+++Y  PN  E +VHR+GRTG
Sbjct:   652 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 711

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL-----ESSAE-QVVATL 233
             RAG +G A    T  Q R    + + +      V PP +E +      +  AE +++   
Sbjct:   712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKAEGKIIKKS 770

Query:   234 NGVHPESVEFFTPTAQRLIEEK 255
             +G   +  +F   T Q L  E+
Sbjct:   771 SGFSGKGFKF-DETEQALANER 791


>UNIPROTKB|I3LR20 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
            Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
        Length = 1032

 Score = 325 (119.5 bits), Expect = 4.8e-28, P = 4.8e-28
 Identities = 83/262 (31%), Positives = 135/262 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 591

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++   I      K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   592 DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 651

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+ ++ L+++Y  PN  E +VHR+GRTG
Sbjct:   652 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 711

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL-----ESSAE-QVVATL 233
             RAG +G A    T  Q R    + + +      V PP +E +      +  AE +++   
Sbjct:   712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKAEGKIIKKS 770

Query:   234 NGVHPESVEFFTPTAQRLIEEK 255
             +G   +  +F   T Q L  E+
Sbjct:   771 SGFSGKGFKF-DETEQALANER 791


>MGI|MGI:1920895 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
            EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
            UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
            STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
            Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
            UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
            Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
            GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
        Length = 1032

 Score = 325 (119.5 bits), Expect = 4.8e-28, P = 4.8e-28
 Identities = 83/262 (31%), Positives = 135/262 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 591

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++   I      K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   592 DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 651

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+ ++ L+++Y  PN  E +VHR+GRTG
Sbjct:   652 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 711

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL-----ESSAE-QVVATL 233
             RAG +G A    T  Q R    + + +      V PP +E +      +  AE +++   
Sbjct:   712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKAEGKIIKKS 770

Query:   234 NGVHPESVEFFTPTAQRLIEEK 255
             +G   +  +F   T Q L  E+
Sbjct:   771 SGFSGKGFKF-DETEQALANER 791


>RGD|708480 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
            HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
            EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
            RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
            STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
            Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
            UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 325 (119.5 bits), Expect = 4.8e-28, P = 4.8e-28
 Identities = 83/262 (31%), Positives = 135/262 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 591

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++   I      K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   592 DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 651

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+ ++ L+++Y  PN  E +VHR+GRTG
Sbjct:   652 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 711

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL-----ESSAE-QVVATL 233
             RAG +G A    T  Q R    + + +      V PP +E +      +  AE +++   
Sbjct:   712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKAEGKIIKKS 770

Query:   234 NGVHPESVEFFTPTAQRLIEEK 255
             +G   +  +F   T Q L  E+
Sbjct:   771 SGFSGKGFKF-DETEQALANER 791


>UNIPROTKB|Q62780 [details] [associations]
            symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
            PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
            ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
            PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
            KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 325 (119.5 bits), Expect = 4.8e-28, P = 4.8e-28
 Identities = 83/262 (31%), Positives = 135/262 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 591

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++   I      K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   592 DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 651

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+ ++ L+++Y  PN  E +VHR+GRTG
Sbjct:   652 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 711

Query:   180 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL-----ESSAE-QVVATL 233
             RAG +G A    T  Q R    + + +      V PP +E +      +  AE +++   
Sbjct:   712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKAEGKIIKKS 770

Query:   234 NGVHPESVEFFTPTAQRLIEEK 255
             +G   +  +F   T Q L  E+
Sbjct:   771 SGFSGKGFKF-DETEQALANER 791


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 318 (117.0 bits), Expect = 4.9e-28, P = 4.9e-28
 Identities = 79/209 (37%), Positives = 122/209 (58%)

Query:     1 MLAVGFEEDVELILE--NLPPK--RQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDE 56
             ML +GF  D++ ++    +P K  RQ+++FSAT P  V++L+ ++L       ++GN   
Sbjct:   330 MLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCG 389

Query:    57 KLAEGIKLYAISTTATSKRTILSDLITVYAKGG-KTIVFTQTKRDADEVSLALTSI-IAS 114
               ++ ++   +     SKR  L +++   + GG +T+VF  TK+ AD ++  L    + S
Sbjct:   390 ACSD-VQQNILQVPRLSKRDKLIEILQ--STGGERTMVFVDTKKKADYLAAFLCQENLPS 446

Query:   115 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 174
              ++HGD  Q +RE  L  FR GK  +LVAT VA+RGLDI NV  +I+++LPN  E +VHR
Sbjct:   447 TSIHGDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHR 506

Query:   175 SGRTGRAGKEGTAILMFTS-SQRRTVRSL 202
              GRTGR G  G A+  F   S    V+SL
Sbjct:   507 IGRTGRCGNTGKAVSFFDDQSDGHLVQSL 535


>UNIPROTKB|C9JMU5 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
            HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
            STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
            ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
        Length = 652

 Score = 320 (117.7 bits), Expect = 5.9e-28, P = 5.9e-28
 Identities = 74/224 (33%), Positives = 128/224 (57%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L +   I+ VGN +     
Sbjct:   251 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANH 309

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +   +     ++  +  + A K  KTI+F +TKR  D+++  +      +  +
Sbjct:   310 NILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI 369

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGL--DIPNVDLIIHYELPNDPETFVHRS 175
             HGD SQ +R+  LN FR GK  +L+ATDVA+RGL  D+ +V  +I+Y+ PN  E +VHR 
Sbjct:   370 HGDKSQPERDWVLNEFRSGKAPILIATDVASRGLGFDVEDVKFVINYDYPNSSEDYVHRI 429

Query:   176 GRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 219
             GRT R+  +GTA   FT    +  R L + +    + ++P +++
Sbjct:   430 GRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQ 473


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 318 (117.0 bits), Expect = 6.0e-28, P = 6.0e-28
 Identities = 79/209 (37%), Positives = 122/209 (58%)

Query:     1 MLAVGFEEDVELILE--NLPPK--RQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDE 56
             ML +GF  D++ ++    +P K  RQ+++FSAT P  V++L+ ++L       ++GN   
Sbjct:   330 MLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCG 389

Query:    57 KLAEGIKLYAISTTATSKRTILSDLITVYAKGG-KTIVFTQTKRDADEVSLALTSI-IAS 114
               ++ ++   +     SKR  L +++   + GG +T+VF  TK+ AD ++  L    + S
Sbjct:   390 ACSD-VQQNILQVPRLSKRDKLIEILQ--STGGERTMVFVDTKKKADYLAAFLCQENLPS 446

Query:   115 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 174
              ++HGD  Q +RE  L  FR GK  +LVAT VA+RGLDI NV  +I+++LPN  E +VHR
Sbjct:   447 TSIHGDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHR 506

Query:   175 SGRTGRAGKEGTAILMFTS-SQRRTVRSL 202
              GRTGR G  G A+  F   S    V+SL
Sbjct:   507 IGRTGRCGNTGKAVSFFDDQSDGHLVQSL 535


>UNIPROTKB|Q4R6M5 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
            HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
            Uniprot:Q4R6M5
        Length = 614

 Score = 319 (117.4 bits), Expect = 6.3e-28, P = 6.3e-28
 Identities = 71/205 (34%), Positives = 119/205 (58%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML +GFE  +  I++ + P RQ++++SAT P  V++L+  +L + ++I+ +G  +     
Sbjct:   253 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANH 311

Query:    61 GI-KLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEAL 117
              I ++  +         ++  +  + + K  KTIVF +TKR  DE++  +      +  +
Sbjct:   312 NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGI 371

Query:   118 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 177
             HGD SQ +R   LN F+ GK  +L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GR
Sbjct:   372 HGDKSQQERGWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 431

Query:   178 TGRAGKEGTAILMFTSSQRRTVRSL 202
             T R+ K GTA   FT +  + V  L
Sbjct:   432 TARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|Q8JFP1 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
            EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
            ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
            Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
            KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
            ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
        Length = 407

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 72/205 (35%), Positives = 116/205 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMP  V ++++K++  P+ I LV  ++E   E
Sbjct:   188 MLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRI-LV-KKEELTLE 245

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GIK + I+      K   L DL        + ++F  T+R  D ++  + +      ALH
Sbjct:   246 GIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALH 304

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   305 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 364

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLE 203
             GR G++G AI   T   +R +R +E
Sbjct:   365 GRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|I3LLD5 [details] [associations]
            symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
            Uniprot:I3LLD5
        Length = 401

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 75/224 (33%), Positives = 123/224 (54%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML+ GF++ +  I + L    Q +L SATMPS V ++++K++ +P+ I L         E
Sbjct:   187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIXLT-------LE 239

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 118
             GI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+H
Sbjct:   240 GIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMH 298

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR 
Sbjct:   299 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 358

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 222
             GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   359 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 401


>TAIR|locus:2037416 [details] [associations]
            symbol:RCF1 "regulator of CBF gene expression 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
            RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
            ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
            EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
            KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
            TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
            ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
            Uniprot:Q8H0U8
        Length = 1166

 Score = 324 (119.1 bits), Expect = 7.5e-28, P = 7.5e-28
 Identities = 86/279 (30%), Positives = 144/279 (51%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  +  I++N+ P+RQ++LFSAT P  V+ L+RK L+ P+ I  VG +     +
Sbjct:   691 MFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQ-VGGRSVVNKD 749

Query:    61 GIKLYAISTTATSKRTI-LSDLITVYAKGGKTIVFTQTKRDADEVSL-ALTSIIASEALH 118
               +L  +     S R + L +L+  +++ GK +VF Q++   D +    + S     +LH
Sbjct:   750 ITQL--VEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLH 807

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             G   Q  RE T++ F+     +L+AT VAARGLD+  ++L+++++ PN  E +VHR GRT
Sbjct:   808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRT 867

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHP 238
             GRAG++G A+   +    +    L + +    E    PV +D+   +   +V    G+  
Sbjct:   868 GRAGRKGCAVTFISEDDAKYAPDLVKAL----ELSEQPVPDDLKALADGFMVKVKQGIEQ 923

Query:   239 ESVEFFTPTAQRLIEEKGTDALAAALAQLS--GFSRPPS 275
                  +  +  +  EE+     AA  AQ    GF    S
Sbjct:   924 AHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKS 962


>TAIR|locus:2130918 [details] [associations]
            symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
            OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
            PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
            ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
            PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
            KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
            PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
            GermOnline:AT4G16630 Uniprot:Q9ZRZ8
        Length = 789

 Score = 321 (118.1 bits), Expect = 7.5e-28, P = 7.5e-28
 Identities = 86/248 (34%), Positives = 137/248 (55%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNI--DLVGNQDEKL 58
             +L  GF  ++  ++   P +RQ+MLFSATM   VK+L +  L+ PL +  D    +   L
Sbjct:   325 LLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGL 384

Query:    59 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL--ALTSIIASEA 116
              E +     +  A  +  +LS L T   K  K I+F+ TK+ A  + +   L  + A+E 
Sbjct:   385 TEEVVRIRRTREANQEAVLLS-LCTRTFKS-KVIIFSGTKQAAHRLKILFGLAGLKAAE- 441

Query:   117 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSG 176
             LHG+++Q QR  +L  FR+ +   L+ATDVAARGLDI  V  +I+Y  P + +++VHR G
Sbjct:   442 LHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVG 501

Query:   177 RTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEF-VSPP--VVE--DVLESSAEQVVA 231
             RT RAG+EG A+   T S R  ++ + + VG K +  V P   +V+   +++   +Q  A
Sbjct:   502 RTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSA 561

Query:   232 TLNGVHPE 239
              ++    E
Sbjct:   562 VISAERDE 569


>UNIPROTKB|E1BSC0 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
            IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
        Length = 1031

 Score = 323 (118.8 bits), Expect = 7.8e-28, P = 7.8e-28
 Identities = 71/198 (35%), Positives = 111/198 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             M  +GFE  V  I++N+ P RQ+++FSAT P  ++ L+R+ L  P+ + + G     +  
Sbjct:   533 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCS 590

Query:    61 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHG 119
              ++ + I     +K   L +L+  Y + G  I+F   +  AD +   L  +     +LHG
Sbjct:   591 DVEQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHG 650

Query:   120 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 179
              I Q+ R+  +N F+ G   +LVAT VAARGLD+  + L+++Y  PN  E +VHR+GRTG
Sbjct:   651 GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTG 710

Query:   180 RAGKEGTAILMFTSSQRR 197
             RAG +G A    T  Q R
Sbjct:   711 RAGNKGFAYTFITEDQAR 728


>DICTYBASE|DDB_G0269192 [details] [associations]
            symbol:tifA "eukaryotic translation initiation factor
            4A" species:44689 "Dictyostelium discoideum" [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
            SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
            KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
        Length = 405

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 69/206 (33%), Positives = 117/206 (56%)

Query:     1 MLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAE 60
             ML++GF++ +  +   LP   Q +L SAT+   V  ++ K++  P+ I L   +DE   +
Sbjct:   186 MLSLGFQQQINDVYRYLPNGTQIVLVSATLTQDVVSMTEKFMTKPVRILL--KRDELTLD 243

Query:    61 GIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA-LH 118
             GIK + +S      K   L D+        + ++F  TK+  D+++  +     + A +H
Sbjct:   244 GIKQFFVSVEKEDWKFGTLCDIYDSLTIT-QAVIFCNTKKKVDQLTEQMRDANFTVASMH 302

Query:   119 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 178
             GD+ Q +RE  +  FR G+  VL+ TD+ ARG+D+  V L+I+Y+LP D E ++HR GR+
Sbjct:   303 GDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRS 362

Query:   179 GRAGKEGTAILMFTSSQRRTVRSLER 204
             GR G++G AI    +S  R +R +E+
Sbjct:   363 GRFGRKGVAINFVKNSDIRILRDIEQ 388

WARNING:  HSPs involving 650 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      493       403   0.00099  117 3  11 22  0.42    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  900
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  226 KB (2124 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.15u 0.09s 34.24t   Elapsed:  00:00:02
  Total cpu time:  34.19u 0.09s 34.28t   Elapsed:  00:00:02
  Start:  Mon May 20 20:15:40 2013   End:  Mon May 20 20:15:42 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	2.4e-177
BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	9.6e-73
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	4.8e-71
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	1.0e-59
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	3.2e-58
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.1e-58
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.1e-58
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	1.1e-57
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	1.1e-57
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	5.9e-57
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	2.0e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	2.5e-56
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	2.9e-55
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	3.1e-55
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	3.7e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	6.1e-55
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	7.4e-54
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	3.7e-48
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	3.7e-48
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	1.6e-47
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	gene from Rattus norvegicus	4.2e-47
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	4.5e-43
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.7e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	4.6e-41
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	4.6e-41
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	4.6e-41
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	7.7e-41
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	1.1e-40
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	2.0e-40
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	5.3e-40
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.6e-38
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.6e-38
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.1e-36
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	1.1e-36
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	1.9e-35
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.9e-35
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	2.5e-35
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	5.7e-35
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.1e-34
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	1.9e-34
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	9.5e-34
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	1.2e-33
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	1.4e-33
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	1.4e-33
BLAST match view associations BLAST with VC_2564 VC_2564 VC_2564 ATP-dependent RNA helicase DbpA	protein from Vibrio cholerae O1 biovar El Tor	1.9e-33
BLAST match view associations BLAST with RVBD_3211 RVBD_3211 RVBD_3211 ATP-dependent RNA helicase rhlE	protein from Mycobacterium tuberculosis H37Rv	2.0e-33
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	2.2e-33
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	3.2e-33
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	3.4e-33
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.1e-33
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	5.2e-33
BLAST match view associations BLAST with BAS2301 BAS2301 BAS2301 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	6.7e-33
BLAST match view associations BLAST with BA_2475 BA_2475 BA_2475 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	6.7e-33
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	7.0e-33
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	8.2e-33
BLAST match view associations BLAST with rhlE_2 rhlE_2 rhlE_2 Putative ATP-dependent RNA helicase	protein from Pseudomonas protegens Pf-5	9.8e-33
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	1.3e-32
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	1.4e-32
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	2.9e-32
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	3.5e-32
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	3.8e-32
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	4.7e-32
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	6.0e-32
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	6.0e-32
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	9.6e-32
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	9.8e-32
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	1.0e-31
BLAST match view associations BLAST with dbpA dbpA dbpA ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	1.3e-31
BLAST match view associations BLAST with CPS_1540 CPS_1540 CPS_1540 ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	1.3e-31
BLAST match view associations BLAST with DBP2 DBP2 DBP2	gene_product from Candida albicans	1.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	1.6e-31
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	1.6e-31
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	1.6e-31
BLAST match view associations BLAST with CPS_2658 CPS_2658 CPS_2658 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.0e-31
BLAST match view associations BLAST with SO_3783 SO_3783 SO_3783 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.4e-31
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	2.6e-31
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	2.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	2.6e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	2.6e-31
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	2.7e-31
BLAST match view associations BLAST with RRP3 RRP3 RRP3 Protein involved in rRNA processing	gene from Saccharomyces cerevisiae	3.6e-31
BLAST match view associations BLAST with DBP2 DBP2 DBP2 ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	3.6e-31
BLAST match view associations BLAST with AT2G42520 AT2G42520 AT2G42520	protein from Arabidopsis thaliana	3.7e-31
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	4.2e-31
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	4.2e-31
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	4.2e-31
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	4.3e-31
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	4.3e-31
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	4.8e-31